Citrus Sinensis ID: 008332

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570
Protein Sequence
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSYH
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccccEEEEEEEEEcccccEEEccccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHcHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccHHHHHHHccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccEEEccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEcccccccccccccEEEEcccHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHcccccHHHHHccccccccEEEEEEEcccccccEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccHccEEEEEEEEcccccEEEccccccccHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHccccHHHHHHHHcHHHEEEEccccccccccccccccccccccccccccHHHHHHHHHHccccHHHEEEEccccccEEEEEcccccccccccccccccHccHHHHHHHHHHHHcccccEEEEEcccccccEEEcccEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccHHHHHHHHcccccccccccccccEEHHHHHHHHHHHHHHHHHHHHcHHccccccccccccccccccccccccccccccccEEEEHHHHHHHHccccHHcccccccccccEccccccccEEEEEEccccccccHHHHHHHEEEEEEHHHHHHHHHHccccccccEEEEEEccccccccEEEEccccEEEEEcccEEEEEc
Coil and Loop (DISEMBL)
MASIIISIIFHTllyselhpakakpwirvgylnlsevstisginyDLFTHLIcssadinsttyqlslslpsdenQIAKFADtvkkknpsiTTILSigqgkdtnySIYSSMvrnsshrksfidSSIRIARLYGfrgldfawtapntstdmfniGLLFDEWRIAATkldaknstRQQSLLILTArfrysppansyLLNSIQRNLNWIHAVtasyyepvstnftappaalygsisgrfaRSTDQVLKAWIERGLSADKLVMCLPFYGYAwtlvkpedngigaaaagpalydsgLVTYKKIKNHiktygpdvqVMYNSTYEVNYFStgtvwfgfdDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQkdsitsasvdkdehssnrRLSIALISTAAAALTLLLGCCAYKYNQMKRLNLIEedsakasntranneteagdfnrnvpnlrvysLADIEAATERFSIRnklgeggygpvykgvlpcgEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYeympnksldcylfglshqktyfglektcsyh
Flexible Loop (DISEMBL)
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFadtvkkknpsittilsigqgkdtnYSIYSSMvrnsshrksfIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATkldaknstrqQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSitsasvdkdehssnRRLSIALISTAAAALTLLLGCCAYKYNQMKRLNLIEEDSAKasntranneteagdfnrnvpnLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSYH
Low Complexity Region (SEG)
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVDKDEHSSNRRlsialistaaaaltlllGCCAYKYNQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSYH
Disordered region (IsUnstruct)
***IIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSL******IAKFADTV****PSITTILSIGQGKDTNYSIYSSMVRN**HRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQ***********************LSIALISTAAAALTLLLGCCAYKYNQMKRLNLI***********************NVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKT****
Disordered Region (DISOPRED)
*ASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAAT************LLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAA*****LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQ********************************PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY*
Disordered Region (DISEMBL)
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAA*******************RRLSIALISTAAAALTLLLGCCAYKYNQMKRLNLIEEDS***********TEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSYH
Disordered Region (DISPRO)
*ASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRLN******A*ASNT*****TEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSYH
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSYH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	570	2.2.26 [Sep-21-2011]
Q9SXB8	842	G-type lectin S-receptor-	no	no	0.270	0.182	0.472	1e-33
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.287	0.194	0.448	2e-33
Q9T058	849	G-type lectin S-receptor-	no	no	0.317	0.213	0.425	2e-33
O81832	783	G-type lectin S-receptor-	no	no	0.189	0.137	0.592	4e-33
O64771	809	G-type lectin S-receptor-	no	no	0.305	0.215	0.424	1e-32
O64778	807	G-type lectin S-receptor-	no	no	0.324	0.229	0.382	4e-32
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.349	0.238	0.4	1e-31
O64784	821	G-type lectin S-receptor-	no	no	0.291	0.202	0.407	1e-31
Q9ZR08	852	G-type lectin S-receptor-	no	no	0.278	0.186	0.450	2e-31
Q9LZU4	676	Cysteine-rich receptor-li	no	no	0.228	0.192	0.511	3e-31

>sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3

 Score =  144 bits (364), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/161 (47%), Positives = 104/161 (64%), Gaps = 7/161 (4%)

Query: 401 AALTLLLGCCAYKYNQMKRLNLIEEDSAKASNTRAN---NETEAGDFNRNVPNLRVYSLA 457
           AA+ +LL C  YK    KR    ++ SA+    R     ++ E+      +  L ++   
Sbjct: 460 AAVCVLLACRKYK----KRPAPAKDRSAELMFKRMEALTSDNESASNQIKLKELPLFEFQ 515

Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
            +  +T+ FS+RNKLG+GG+GPVYKG LP G+ IAVK+LS+ S QG EE  NEV++ +KL
Sbjct: 516 VLATSTDSFSLRNKLGQGGFGPVYKGKLPEGQEIAVKRLSRKSGQGLEELMNEVVVISKL 575

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQK 558
           QH NL+++LG CI+ EERML+YEYMP KSLD YLF    QK
Sbjct: 576 QHRNLVKLLGCCIEGEERMLVYEYMPKKSLDAYLFDPMKQK 616

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score =  144 bits (362), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/176 (44%), Positives = 110/176 (62%), Gaps = 12/176 (6%)

Query: 386 SSNRRLSIALISTAAAALTLLLG--CCAYKYNQMKRLNLIEEDSAKASNTRAN------- 436
           S  +RL + LIS  A  + LL+   C   K  Q  + N + +  +  + +  +       
Sbjct: 437 SGKKRLVLILISLIAVVMLLLISFHCYLRKRRQRTQSNRLRKAPSSFAPSSFDLEDSFIL 496

Query: 437 NETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKL 496
            E E    +R +P   ++ L+ I  AT  F+ +NKLG GG+GPVYKGVL  G  IAVK+L
Sbjct: 497 EELEDKSRSRELP---LFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGMEIAVKRL 553

Query: 497 SKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           SK+S QG EEFKNEV L +KLQH NL+R+LG C++ EE+ML+YEY+PNKSLD ++F
Sbjct: 554 SKSSGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKSLDYFIF 609

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9T058|Y4119_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900 OS=Arabidopsis thaliana GN=At4g11900 PE=2 SV=1

 Score =  144 bits (362), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 117/195 (60%), Gaps = 14/195 (7%)

Query: 361 HDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALIS---TAAAALTLLLGCCAYKYNQM 417
           H + L  A++   +I++A+  K EHS  + + + L+     A AA  + L CC     + 
Sbjct: 440 HTFFLRLASS---NISTANNRKTEHSKGKSIVLPLVLASLVATAACFVGLYCCISSRIRR 496

Query: 418 KRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGY 477
           K+    E+ S +          E G  +    N+   +L DI  AT  FS + KLGEGG+
Sbjct: 497 KKKQRDEKHSREL--------LEGGLIDDAGENMCYLNLHDIMVATNSFSRKKKLGEGGF 548

Query: 478 GPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML 537
           GPVYKG LP G  +A+K+LSK S+QG  EFKNEV+L  KLQH NL+R+LG+C++ +E++L
Sbjct: 549 GPVYKGKLPNGMEVAIKRLSKKSSQGLTEFKNEVVLIIKLQHKNLVRLLGYCVEGDEKLL 608

Query: 538 IYEYMPNKSLDCYLF 552
           IYEYM NKSLD  LF
Sbjct: 609 IYEYMSNKSLDGLLF 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score =  143 bits (360), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 64/108 (59%), Positives = 81/108 (75%)

Query: 451 LRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNE 510
           L    L  +  AT  FS  NKLG+GG+GPVYKG L CG+ +AVK+LS+TS QG EEFKNE
Sbjct: 450 LPFLDLDTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQEVAVKRLSRTSRQGVEEFKNE 509

Query: 511 VMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQK 558
           + L AKLQH NL+++LG+C+D EERMLIYEY PNKSLD ++F    ++
Sbjct: 510 IKLIAKLQHRNLVKILGYCVDEEERMLIYEYQPNKSLDSFIFDKERRR 557

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64771|Y1148_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana GN=At1g61480 PE=2 SV=2

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 114/179 (63%), Gaps = 5/179 (2%)

Query: 375 ITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRLNLIEEDSAKASNTR 434
           I S  +   E   N+R  I + S  + +L ++L   A+ + + K  + +    +K ++  
Sbjct: 408 ILSIRLASSELGGNKRNKIIVASIVSLSLFVILAFAAFCFLRYKVKHTVSAKISKIASKE 467

Query: 435 A-NNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAV 493
           A NN+ E  D    V  L+ + +  I+ AT+ FS+ NKLG+GG+G VYKG L  G+ IAV
Sbjct: 468 AWNNDLEPQD----VSGLKFFEMNTIQTATDNFSLSNKLGQGGFGSVYKGKLQDGKEIAV 523

Query: 494 KKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           K+LS +S QG EEF NE++L +KLQH NL+R+LG CI+ EER+L+YE++ NKSLD +LF
Sbjct: 524 KRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEERLLVYEFLLNKSLDTFLF 582

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64778|Y1142_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS=Arabidopsis thaliana GN=At1g61420 PE=2 SV=2

 Score =  140 bits (352), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 117/196 (59%), Gaps = 11/196 (5%)

Query: 360 DHDWLLSQAAAQKDSITSASVDKDEHSSNRR---LSIALISTAAAALTLLLGCCAYKYNQ 416
           + D + +   ++   + S  + + E   N+R   ++ +++S +   +   +  C ++Y  
Sbjct: 393 NQDLMDAVQFSEGGELLSIRLARSELGGNKRKKAITASIVSLSLVVIIAFVAFCFWRY-- 450

Query: 417 MKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGG 476
             R+    + +  AS     N+ +  D    VP L  + +  I+ AT  FSI NKLG+GG
Sbjct: 451 --RVKHNADITTDASQVSWRNDLKPQD----VPGLDFFDMHTIQTATNNFSISNKLGQGG 504

Query: 477 YGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM 536
           +GPVYKG L  G+ IAVK+LS +S QG EEF NE++L +KLQH NL+R+LG CI+ EE++
Sbjct: 505 FGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKL 564

Query: 537 LIYEYMPNKSLDCYLF 552
           LIYE+M N SLD +LF
Sbjct: 565 LIYEFMLNNSLDTFLF 580

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  138 bits (348), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 125/230 (54%), Gaps = 31/230 (13%)

Query: 341 AYAKEKR-LLGYYAWQVSFDDHDWLLSQAA---AQKDSITSASVDKDEHSSNRRLSIALI 396
           AY + KR  +G   W     D    L+       + D    A  +++  S  RR+ + LI
Sbjct: 385 AYHESKRGAIGCLKWHGGMLDARTYLNSGQDFYIRVDKEELARWNRNGLSGKRRVLLILI 444

Query: 397 STAAAA--LTLLLGCCAYKYNQMKRLNLIEEDSAKASNTRANNETEAGDF---------- 444
           S  AA   LT++L C   +  +          S +  ++ AN      DF          
Sbjct: 445 SLIAAVMLLTVILFCVVRERRK----------SNRHRSSSANFAPVPFDFDESFRFEQDK 494

Query: 445 --NRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
             NR +P   ++ L  I AAT  FS +NKLG GG+GPVYKGVL     IAVK+LS+ S Q
Sbjct: 495 ARNRELP---LFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVLQNRMEIAVKRLSRNSGQ 551

Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           G EEFKNEV L +KLQH NL+R+LG C++ EE+ML+YEY+PNKSLD ++F
Sbjct: 552 GMEEFKNEVKLISKLQHRNLVRILGCCVELEEKMLVYEYLPNKSLDYFIF 601

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64784|Y1136_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 OS=Arabidopsis thaliana GN=At1g61360 PE=2 SV=1

 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 114/179 (63%), Gaps = 13/179 (7%)

Query: 384 EHSSNRRLSIALISTAAAALTLLL-----GCCAYKYNQMKRLNLIEEDSAKASNTRANNE 438
           E +  +R+ I  ++T + ++ L+L     GC  Y+  Q    +L+ +D+ + +     ++
Sbjct: 419 ELTGRKRIKIITVATLSLSVCLILVLVACGCWRYRVKQNGS-SLVSKDNVEGA---WKSD 474

Query: 439 TEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSK 498
            ++ D    V  L  + + D++ AT  FS+ NKLG+GG+G VYKG L  G+ IAVK+L+ 
Sbjct: 475 LQSQD----VSGLNFFEIHDLQTATNNFSVLNKLGQGGFGTVYKGKLQDGKEIAVKRLTS 530

Query: 499 TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
           +S QG EEF NE+ L +KLQH NL+R+LG CID EE++L+YEYM NKSLD ++F L  +
Sbjct: 531 SSVQGTEEFMNEIKLISKLQHRNLLRLLGCCIDGEEKLLVYEYMVNKSLDIFIFDLKKK 589

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3

 Score =  137 bits (346), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 14/173 (8%)

Query: 391 LSIALISTAAAALTLLLGCCAYKYNQMKRLNL----IEEDSAKASNTRANNE-TEAGDFN 445
           L I +  T+AA L +L    +Y + Q +++N     I        + R   E  E+G F 
Sbjct: 449 LIIVVTFTSAAILVVLSSTASYVFLQRRKVNKELGSIPRGVHLCDSERHIKELIESGRFK 508

Query: 446 RN------VPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT 499
           ++      VP+   + L  I  AT  FS  NKLG+GG+GPVYKG+ P  + IAVK+LS+ 
Sbjct: 509 QDDSQGIDVPS---FELETILYATSNFSNANKLGQGGFGPVYKGMFPGDQEIAVKRLSRC 565

Query: 500 STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           S QG EEFKNEV+L AKLQH NL+R+LG+C+  EE++L+YEYMP+KSLD ++F
Sbjct: 566 SGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVAGEEKLLLYEYMPHKSLDFFIF 618

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LZU4|CRK4_ARATH Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1

 Score =  137 bits (345), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 93/135 (68%), Gaps = 5/135 (3%)

Query: 427 SAKASNTRANNE----TEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYK 482
           S +A  TR N E    TE  D      +L+ +    IEAAT +F   NKLG+GG+G VYK
Sbjct: 309 SLRAKKTRTNYEREPLTEESDDITTAGSLQ-FDFKAIEAATNKFCETNKLGQGGFGEVYK 367

Query: 483 GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM 542
           G+ P G  +AVK+LSKTS QG  EF NEV++ AKLQH NL+R+LGFC++ +ER+L+YE++
Sbjct: 368 GIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFV 427

Query: 543 PNKSLDCYLFGLSHQ 557
           PNKSLD ++F  + Q
Sbjct: 428 PNKSLDYFIFDSTMQ 442

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	570
356558668	909	PREDICTED: uncharacterized protein LOC10	0.891	0.558	0.520	1e-144
224142425	763	predicted protein [Populus trichocarpa]	0.924	0.690	0.529	1e-144
359484771	781	PREDICTED: G-type lectin S-receptor-like	0.884	0.645	0.498	1e-134
359497026	738	PREDICTED: G-type lectin S-receptor-like	0.896	0.692	0.460	1e-125
296088199	1130	unnamed protein product [Vitis vinifera]	0.864	0.436	0.435	1e-116
255565055	721	conserved hypothetical protein [Ricinus	0.850	0.672	0.442	1e-107
5814093	739	receptor-like kinase CHRK1 [Nicotiana ta	0.849	0.654	0.405	1e-101
147787796	658	hypothetical protein VITISV_036051 [Viti	0.796	0.689	0.405	7e-98
296084604	580	unnamed protein product [Vitis vinifera]	0.577	0.567	0.516	1e-91
255565053	445	conserved hypothetical protein [Ricinus	0.628	0.804	0.460	2e-85

>gi|356558668|ref|XP_003547625.1| PREDICTED: uncharacterized protein LOC100787480 [Glycine max]

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 288/553 (52%), Positives = 367/553 (66%), Gaps = 45/553 (8%)

Query: 5   IISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQ 64
           I  ++F  LL  E  P KA+ W++ GY        +S IN  L+THLIC+ A++NS+TY+
Sbjct: 7   IALVLFEFLLCQEFEPLKAQTWLQAGYWYSGSGFPVSDINSALYTHLICAFAELNSSTYE 66

Query: 65  LSLSLPSDENQIAKFADTVKKKNPSITTILSI--GQGKDTNYSIYSSMVRNSSHRKSFID 122
           L +S P DE   + F  TVK+KNPSITT+LSI  G G DT   + S MV   S RK FI 
Sbjct: 67  LYVS-PEDEQSFSSFTTTVKQKNPSITTLLSIAGGNGNDT---VLSLMVSKDSSRKYFIQ 122

Query: 123 SSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTA 182
           SSIRIARLYGF+GLD +W  P T +DM N+G LF+EWR AA    A +ST+   +LILTA
Sbjct: 123 SSIRIARLYGFQGLDLSWV-PETISDMNNMGRLFEEWRAAAKSEAANDSTQ---VLILTA 178

Query: 183 RFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTD 240
              + P  +S  Y + SIQ NLNW+H +T  Y+ P   NFTA  AALY   S   + +TD
Sbjct: 179 AVHFRPGLDSASYPVESIQNNLNWVHILTYDYHMPQLANFTAAHAALYDPSS---SVNTD 235

Query: 241 QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNH 300
             +K WI  G++A KLV+ LPFYGYAW L  PEDN IGA+A GPA+  SG + YK IK +
Sbjct: 236 NGIKEWIGSGVTASKLVLGLPFYGYAWNLRNPEDNAIGASATGPAIGKSGAMNYKDIKAY 295

Query: 301 IKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           I+ YG  V+  YN+TY VNYFS G+ W G+DDVE V+ K++YA+E +LLGY  WQV +DD
Sbjct: 296 IQRYGGHVK--YNATYVVNYFSNGSTWIGYDDVEVVKMKVSYARENKLLGYAVWQVPYDD 353

Query: 361 HDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRL 420
            +W+LS AAA+        VD++  +S R L I LI TA + +  LLG   Y    ++R 
Sbjct: 354 -NWVLSSAAAEH-------VDQNGRNSWRLLVIILIITAMSVI--LLGILIY---YLRR- 399

Query: 421 NLIEEDSAKASNTRANNETEAGD-FNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGP 479
                        R    T+A   F+ N P+L+V+S +DIE AT RFSI NK+G+GGYGP
Sbjct: 400 -------------RFPKSTDASRLFHSNAPDLQVFSFSDIEQATNRFSIENKVGQGGYGP 446

Query: 480 VYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY 539
           VYKG+L   + +AVKKLSK STQGFEEFKNEVMLTA+LQHVNL+R+LGF ID E++ML+Y
Sbjct: 447 VYKGILSNRQEVAVKKLSKASTQGFEEFKNEVMLTARLQHVNLVRLLGFYIDGEQQMLVY 506

Query: 540 EYMPNKSLDCYLF 552
           EYMPNKSLD YLF
Sbjct: 507 EYMPNKSLDSYLF 519

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142425|ref|XP_002324558.1| predicted protein [Populus trichocarpa] gi|222865992|gb|EEF03123.1| predicted protein [Populus trichocarpa]

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 294/555 (52%), Positives = 375/555 (67%), Gaps = 28/555 (5%)

Query: 1   MAS-IIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADIN 59
           MAS I I I+FH  L  +LH AKA+ WI+ GY        IS IN  L+THLIC+ A +N
Sbjct: 1   MASRITIIILFHVFLSLKLHTAKAQAWIKAGYWFSGSDLPISDINSTLYTHLICAFAGLN 60

Query: 60  STTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKS 119
           S++Y LS+S  SD+   + F +TVK+KNPSITT+LSIG G   NYS  S+MV NS++RKS
Sbjct: 61  SSSYHLSISS-SDDQFFSAFTNTVKQKNPSITTLLSIGGGS-ANYSTLSAMVGNSTYRKS 118

Query: 120 FIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLI 179
           FID SI+IAR YGF+GLDF+W + NTS +M ++G LF+EWR AA  L+ + S+  +  LI
Sbjct: 119 FIDDSIKIARHYGFQGLDFSWVSANTSDNMDSMGTLFEEWR-AAIALERRKSSLSE--LI 175

Query: 180 LTARFRYSP--PANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR 237
           LTA  +YSP   + S+ ++SI++NLNW H +   YY P    FTA  AALY   S     
Sbjct: 176 LTAAVQYSPRLDSGSFPIDSIRKNLNWTHVLAFDYYMPTWAKFTAAFAALYDPDSDV--- 232

Query: 238 STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKI 297
           +TD  + AWI  GL A KLV+ LPFYGYAW L    ++ IGA A GPA+ + G ++YK I
Sbjct: 233 NTDFGIAAWINGGLPASKLVLGLPFYGYAWKLANLNESAIGAPATGPAVTEDGDLSYKDI 292

Query: 298 KNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVS 357
            N+ KT G  V  +YNSTY VNY   G  W  FD V+ VR K++YAKEK LLGY  W+VS
Sbjct: 293 NNYFKTNG-RVNPIYNSTYVVNYGIVGPAWISFDGVDVVRTKVSYAKEKALLGYVVWEVS 351

Query: 358 FDDHDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQM 417
           +DD+ W+LSQA             K E     R+ I +++T AA + +LLG   Y     
Sbjct: 352 YDDN-WVLSQAGVDL---------KHEGRPKSRILIIILTTTAAVI-ILLGLAFYFIR-- 398

Query: 418 KRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGY 477
              N I +  +K +  + NN   AGDF+ N P+L VYSLADIE AT++F+  NKLGEGG+
Sbjct: 399 ---NRILKSKSKETKLKVNNAAAAGDFDSNNPDLIVYSLADIEKATDQFAFENKLGEGGF 455

Query: 478 GPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML 537
           GPVYKGVLP G+ IAVKKLSK+STQGF+EFKNEVMLTAKLQHVNL++VLGFC++ EE++L
Sbjct: 456 GPVYKGVLPGGQEIAVKKLSKSSTQGFDEFKNEVMLTAKLQHVNLVKVLGFCVEREEKVL 515

Query: 538 IYEYMPNKSLDCYLF 552
           IYEYMP KSLD YLF
Sbjct: 516 IYEYMPKKSLDSYLF 530

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484771|ref|XP_003633158.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1-like [Vitis vinifera]

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/554 (49%), Positives = 351/554 (63%), Gaps = 50/554 (9%)

Query: 21  AKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFA 80
           +  + WI+ GY      S I  I   LFTHL+C+ ADIN TTYQLS+S  S+E+  + F 
Sbjct: 20  SHGETWIKAGYWYAGSESPIPDIKSGLFTHLLCAFADINPTTYQLSIS-SSEEHYFSTFT 78

Query: 81  DTVKKKNPSITTILSI--GQG--------KDTNYSIYSSMVRNSSHRKSFIDSSIRIARL 130
           D VK++NPS+ T+LSI  GQG        +  N S+ S MVR  S+RKSFI+S+++ ARL
Sbjct: 79  DIVKRRNPSVVTLLSIWGGQGPTGLSILGERVNSSMVSLMVRQPSYRKSFIESAMKTARL 138

Query: 131 YGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP- 189
           YGF GLD  W  PNT +DM N+G L DE R AA KL+++NS +  + LILT    Y P  
Sbjct: 139 YGFHGLDLFWLWPNTESDMKNMGALLDELR-AAVKLESRNSGK--APLILTMAVHYVPTL 195

Query: 190 -ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIE 248
            + SY + +IQRNL+W H     YY P   NFT   AALY  +S     STD  ++ WI 
Sbjct: 196 YSVSYHIEAIQRNLDWAHIPAYDYYLPSRVNFTHAHAALYDPLSNV---STDFGIREWIS 252

Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDV 308
           +G  A KLV+ LP++GYAWTLV P  NGIGA  +G A+   G ++YK IK  +++YG   
Sbjct: 253 KGFPASKLVLGLPYHGYAWTLVNPNHNGIGAPTSGIAMTADGSMSYKYIKWFLRSYG--A 310

Query: 309 QVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQA 368
             MYN+TY VNY + GT W GFDDV+A+RAKI+YAKEK+LLGY  +QVS DD +W LSQA
Sbjct: 311 TSMYNATYVVNYVTIGTTWIGFDDVQAIRAKISYAKEKKLLGYNVFQVSNDD-NWALSQA 369

Query: 369 AAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLG---CCAYKYNQMKRL---NL 422
           A   D +         H   + L I ++    A L L+ G   CC  +   +K +   NL
Sbjct: 370 AQDDDKV---------HHKKQELLIKIL-VPIAVLILVAGSIMCCYSRSRVLKAIGTRNL 419

Query: 423 ----IEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYG 478
               + E  +K+S           +FN N PNLRV+S A+I+ AT  FS  NKLGEGG+G
Sbjct: 420 GKISLHEVGSKSSGVE--------NFNSNAPNLRVFSFAEIKEATNNFSFENKLGEGGFG 471

Query: 479 PVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI 538
           PVYKG    GE +AVK+LSKTS QG EEFKNEV LTAKLQHVNL+R+ GFC + EE+MLI
Sbjct: 472 PVYKGKSQKGEEMAVKRLSKTSNQGAEEFKNEVTLTAKLQHVNLVRLQGFCTEGEEKMLI 531

Query: 539 YEYMPNKSLDCYLF 552
           YEYMPNKSLD YLF
Sbjct: 532 YEYMPNKSLDFYLF 545

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497026|ref|XP_003635401.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera]

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/552 (46%), Positives = 349/552 (63%), Gaps = 41/552 (7%)

Query: 3   SIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTT 62
           ++++ I FH  L      + ++ W++ GY      S +  IN  LFTHL+C+ A ++ + 
Sbjct: 7   ALLLFIAFHFRL------SNSQTWVKAGYWYSGNESPVPDINSALFTHLLCAFAWLDPSA 60

Query: 63  YQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFID 122
           YQ+ +S PSDE   A F + VKK+NPSI T+LSI  GK+ + + +SSM+   S+RKSFI+
Sbjct: 61  YQIYIS-PSDEQYFATFTNIVKKRNPSIITLLSIWAGKNDS-TKFSSMISQPSYRKSFIE 118

Query: 123 SSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTA 182
           SSI+ ARLYGF+GLD +   P T ++  N+G+LFDEWR A   +++++    QS LILT 
Sbjct: 119 SSIKTARLYGFQGLDLSGYWPRTVSNTINMGILFDEWRAA---VNSESRDPSQSPLILTL 175

Query: 183 RFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTD 240
              Y P   S  Y ++SI+RN++W+H     YY P S NFT   AALY  +S     +TD
Sbjct: 176 EVHYLPTLGSVSYEVDSIRRNMDWVHVAAYDYYLPSSVNFTHAHAALYDPVS---RVNTD 232

Query: 241 QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNH 300
             +  WI RGL A KLV+ L ++GYAWTL+ P++NGIGA A+G A+   G V+YK IK  
Sbjct: 233 FGIGEWIGRGLPAGKLVLGLAYHGYAWTLLNPKENGIGAPASGLAMTPDGSVSYKYIKWF 292

Query: 301 IKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           I++Y  +   +YN+TY VNY S G  W G+DDVEA+R K++YAKEK LLGY  W+VS D+
Sbjct: 293 IRSY--ECASVYNATYVVNYCSFGATWIGYDDVEAIRTKVSYAKEKGLLGYNVWEVSHDE 350

Query: 361 HDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRL 420
            +W+LS AA  +D        +DE +  R L I L+  A   L +              +
Sbjct: 351 -NWVLSLAAQGED--------QDEGNKQRLLVIILLPIAIVVLLV------------SSI 389

Query: 421 NLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPV 480
             + +   K+   +  +   +   N + PNL+V+S + I+ AT  FS  N+LGEGG+GPV
Sbjct: 390 MFMMQTRPKSLPIKLGSNISSA--NSDDPNLQVFSFSTIKVATNNFSSENRLGEGGFGPV 447

Query: 481 YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE 540
           YKG LP G+ IAVK+LSKTS QG EEFKNEV LTA LQHVNL+++LGFC   EE+MLIYE
Sbjct: 448 YKGKLPKGQEIAVKRLSKTSHQGLEEFKNEVTLTATLQHVNLVKLLGFCTQREEKMLIYE 507

Query: 541 YMPNKSLDCYLF 552
            MPNKSLD YLF
Sbjct: 508 CMPNKSLDFYLF 519

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088199|emb|CBI35714.3| unnamed protein product [Vitis vinifera]

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/553 (43%), Positives = 337/553 (60%), Gaps = 60/553 (10%)

Query: 3   SIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTT 62
           ++++ I FH  L      + ++ W++ GY      S +  IN  LFTHL+C+ A ++ + 
Sbjct: 402 ALLLFIAFHFRL------SNSQTWVKAGYWYSGNESPVPDINSALFTHLLCAFAWLDPSA 455

Query: 63  YQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFID 122
           YQ+ +S PSDE   A F + VKK+NPSI T+LSI  GK+ + + +SSM+   S+RKSFI+
Sbjct: 456 YQIYIS-PSDEQYFATFTNIVKKRNPSIITLLSIWAGKNDS-TKFSSMISQPSYRKSFIE 513

Query: 123 SSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTA 182
           SSI+ ARLYGF+GLD +   P T ++  N+G+LFDEWR A   +++++    QS LILT 
Sbjct: 514 SSIKTARLYGFQGLDLSGYWPRTVSNTINMGILFDEWRAA---VNSESRDPSQSPLILTL 570

Query: 183 RFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTD 240
              Y P   S  Y ++SI+RN++W+H     YY P                         
Sbjct: 571 EVHYLPTLGSVSYEVDSIRRNMDWVHVAAYDYYLPSR----------------------- 607

Query: 241 QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNH 300
                     L A KLV+ L ++GYAWTL+ P++NGIGA A+G A+   G V+YK IK  
Sbjct: 608 ----------LPAGKLVLGLAYHGYAWTLLNPKENGIGAPASGLAMTPDGSVSYKYIKWF 657

Query: 301 IKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           I++Y  +   +YN+TY VNY S G  W G+DDVEA+R K++YAKEK LLGY  W+VS D+
Sbjct: 658 IRSY--ECASVYNATYVVNYCSFGATWIGYDDVEAIRTKVSYAKEKGLLGYNVWEVSHDE 715

Query: 361 HDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLL-LGCCAYKYNQMKR 419
            +W+LS AA  +D        +DE +  R L I L+  A   L +  + C  +K   +  
Sbjct: 716 -NWVLSLAAQGED--------QDEGNKQRLLVIILLPIAIVVLLVSSIMCHRWKGRLIFN 766

Query: 420 LNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGP 479
           + ++ +   K+   +  +   +   N + PNL+V+S + I+ AT  FS  N+LGEGG+GP
Sbjct: 767 IKVMMQTRPKSLPIKLGSNISSA--NSDDPNLQVFSFSTIKVATNNFSSENRLGEGGFGP 824

Query: 480 VYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY 539
           VYKG LP G+ IAVK+LSKTS QG EEFKNEV LTA LQHVNL+++LGFC   EE+MLIY
Sbjct: 825 VYKGKLPKGQEIAVKRLSKTSHQGLEEFKNEVTLTATLQHVNLVKLLGFCTQREEKMLIY 884

Query: 540 EYMPNKSLDCYLF 552
           E MPNKSLD YLF
Sbjct: 885 ECMPNKSLDFYLF 897

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565055|ref|XP_002523520.1| conserved hypothetical protein [Ricinus communis] gi|223537227|gb|EEF38859.1| conserved hypothetical protein [Ricinus communis]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/531 (44%), Positives = 316/531 (59%), Gaps = 46/531 (8%)

Query: 23  AKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADT 82
           AKPWI+  Y + S     S +N  LFTH+    A I+++TYQLS    S+E  ++ F  T
Sbjct: 2   AKPWIKAAYYDSSGNLPASSVNSALFTHIYYGFAGIDNSTYQLSYPF-SNEQDVSTFTAT 60

Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
           +K+KNPSI T+LSIG     NYS +S+MV   S+RK+FI SSI+IAR YGF GLD AW  
Sbjct: 61  LKRKNPSIITLLSIGLAY-RNYSTFSTMVSQPSYRKAFIRSSIKIARRYGFHGLDLAWLW 119

Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN-SYLLNSIQRN 201
           PNTS DM N+G+L +EWR AA   +++NS+  Q +L +   +R     N ++ + SI+RN
Sbjct: 120 PNTSFDMKNVGVLLEEWR-AAVNSESRNSSEPQIILTMMT-YRLPVIGNLTFPVESIERN 177

Query: 202 LNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLP 261
           LNW++ +T  Y+ P+    T   AALY   SG    +TD  ++AW+ERGL   KLV+ LP
Sbjct: 178 LNWVNILTFDYHLPLKERATGNHAALYDP-SGHV--NTDFCVRAWLERGLPPSKLVLGLP 234

Query: 262 FYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYF 321
           ++GYAWTLV P DN +GA ++GP L   G + YK I++ I  YG  V   YN+TY VNYF
Sbjct: 235 YHGYAWTLVNPNDNSVGAPSSGPDLTMDGSIGYKMIQSVISGYGYGVASTYNATYAVNYF 294

Query: 322 STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVD 381
           +  T W  FDDVEA+R KI+YA  K LLGY+ +Q++ DD DW LS+AA          V 
Sbjct: 295 TIRTTWINFDDVEAIRTKISYAVTKGLLGYFVFQLANDD-DWKLSRAA--------YGVG 345

Query: 382 KDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRLNLIEEDSAKASNTRANNETEA 441
            DE     ++ I L+      L L      Y                +    ++   TE 
Sbjct: 346 NDEKKKKSQIIIVLVPIVVVILLLFAPASYY---------------IRCRTLKSRGNTEF 390

Query: 442 GDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST 501
           G+    VP+   + L         +  +N        P  +G LP G+ IAVK+LSKTS 
Sbjct: 391 GE----VPS---FELGQPITVVNEYPDQN-------APNLQGKLPRGQEIAVKRLSKTSN 436

Query: 502 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           QG +EFKNE+ LTAKLQHVNL+R+LG+C + +E+MLIYEYMPNKSLD YLF
Sbjct: 437 QGLKEFKNELKLTAKLQHVNLVRLLGYCTERKEKMLIYEYMPNKSLDFYLF 487

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5814093|gb|AAD52097.1|AF088885_1 receptor-like kinase CHRK1 [Nicotiana tabacum]

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/535 (40%), Positives = 321/535 (60%), Gaps = 51/535 (9%)

Query: 21  AKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFA 80
           + A  WI+ G+        +  I   +FTH+  + A IN+++++L +S  SDE  I+ F+
Sbjct: 21  SDATAWIKSGFWYAGSEFPVPEIPSTMFTHIHFAFAYINASSFELYVS-HSDEPYISTFS 79

Query: 81  DTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAW 140
           +TVK+KNPS+ T+LSI  G+D + + ++ M    S RKSFI +SI+ AR YGF+GLD   
Sbjct: 80  NTVKQKNPSVITLLSIWGGRDESPNFFA-MTSQFSRRKSFITTSIKTARQYGFQGLDLIG 138

Query: 141 TAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS--YLLNSI 198
             PNT  +M N+    +EWR A       + TR    LILT    YSP  +S  Y +++I
Sbjct: 139 VNPNTDANMTNMRSFIEEWRTAINSESKSSGTRT---LILTMGAYYSPMLDSMSYPIDTI 195

Query: 199 QRNLNWIH-AVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLV 257
            RN +W+H    A+ Y+P S                    +TD  +K WI+RGL A+K+V
Sbjct: 196 IRNFDWVHLKAYAALYDPTS------------------KLNTDYGIKEWIKRGLPANKIV 237

Query: 258 MCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE 317
           + L ++GYAWTLV P+ N +   A G A+   G ++Y+ IK ++K+YG  V  +YNST+ 
Sbjct: 238 LGLAYHGYAWTLVNPKHNTVRTPARGLAITQDGSISYRYIKQYMKSYG--VTPVYNSTFV 295

Query: 318 VNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITS 377
           VNY + G+ W G+DDVEA+R K++YAK+K LLG+ A+Q+  DD +W LS+ A  ++    
Sbjct: 296 VNYVTIGSFWIGYDDVEAIRTKVSYAKDKGLLGFAAFQIPSDDVNWELSKTAQDEE---- 351

Query: 378 ASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRLNLIEEDSAKASNTRANN 437
              ++D+  SNRRL   L+ T    +                + ++++ + ++   R  N
Sbjct: 352 ---EEDQSGSNRRLLAILLPTLTLTIL----------LLSTIVFILKKKTLRSEGIRELN 398

Query: 438 ETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS 497
           E   G       NL+V+    I+AAT+ FSI+NKLGEGG+GPVYKG L  G+ IA+K+LS
Sbjct: 399 ERAIGH------NLKVFKFDKIKAATDNFSIKNKLGEGGFGPVYKGRLSDGQEIAIKRLS 452

Query: 498 KTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
             S QG EEF+NEV L +KLQHVN++++ G C + EE++LIYEYMPNKSLD YL+
Sbjct: 453 AYSKQGVEEFQNEVTLASKLQHVNVLQLQGCCTEREEKILIYEYMPNKSLDFYLY 507

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147787796|emb|CAN60684.1| hypothetical protein VITISV_036051 [Vitis vinifera]

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 226/557 (40%), Positives = 303/557 (54%), Gaps = 103/557 (18%)

Query: 3   SIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTT 62
           ++++ I FH  L      + ++ W++ GY      S +  IN  LFTHL+C+ A ++S+T
Sbjct: 7   ALLLFIAFHFRL------SNSQTWVKAGYWYSGNESPVPDINSALFTHLLCAFAWLDSST 60

Query: 63  YQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFID 122
           YQ+ +S PSDE   A F + VKK+NPSITT+LSI  GK+ + + +SSM+   SHRKSFI+
Sbjct: 61  YQIYIS-PSDEQYFATFTNIVKKRNPSITTLLSIWAGKNDSTN-FSSMISQPSHRKSFIE 118

Query: 123 SSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTA 182
           SSI+ ARLYGF+GLD +   P T ++  N+G+LFDEWR A   +++++    QS LILT 
Sbjct: 119 SSIKTARLYGFQGLDLSGYWPRTVSNTINMGILFDEWRAA---VNSESRDPSQSPLILTL 175

Query: 183 RFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTD 240
           +    P   S  Y ++SI+RNL+W+H     YY P S NFT   AALY           D
Sbjct: 176 KVHCLPTLESVSYEVDSIRRNLDWVHVAAYDYYLPSSVNFTHAHAALY-----------D 224

Query: 241 QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNH 300
             +  W E G            +G  W                                 
Sbjct: 225 PRVTGW-EAGFG----------FGVPWVC------------------------------- 242

Query: 301 IKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           + T  P  +  +++       S G  W G+DDVEA+R K++YAKEK LLGY+ W+VS D+
Sbjct: 243 MDTLEPQGKWYWSTC-----ISFGATWIGYDDVEAIRTKVSYAKEKGLLGYFVWEVSHDE 297

Query: 361 HDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLGCCAYKYNQMKRL 420
            +W+LS AA  +D        +DE +  R L+I L+  A   L   L     K       
Sbjct: 298 -NWVLSLAAQDED--------QDEGNKQRLLAIILLPIAIVVLLTTLKSLPIKL------ 342

Query: 421 NLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPV 480
                     SN  + N  +        PNL+V+S   I+ AT  FS  NKLGEGG+GPV
Sbjct: 343 ---------GSNISSANSDD--------PNLQVFSFTTIKVATNNFSSENKLGEGGFGPV 385

Query: 481 YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE 540
           YKG LP G+ IAVK+LSKTS QG EEFKNEV LTA LQHVNL+++LGFC   EE+MLIYE
Sbjct: 386 YKGKLPKGQEIAVKRLSKTSHQGLEEFKNEVTLTATLQHVNLVKLLGFCTQREEKMLIYE 445

Query: 541 YMPNKSLDCYLFGLSHQ 557
            MP  SLD YLF    Q
Sbjct: 446 CMPXXSLDFYLFDPEGQ 462

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084604|emb|CBI25625.3| unnamed protein product [Vitis vinifera]

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 188/364 (51%), Positives = 233/364 (64%), Gaps = 35/364 (9%)

Query: 192 SYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGL 251
           SY + +IQRNL+W H     YY P   NFT   AALY  +S     STD  ++ WI +G 
Sbjct: 13  SYHIEAIQRNLDWAHIPAYDYYLPSRVNFTHAHAALYDPLSNV---STDFGIREWISKGF 69

Query: 252 SADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVM 311
            A KLV+ LP++GYAWTLV P  NGIGA  +G A+   G ++YK IK  +++YG     M
Sbjct: 70  PASKLVLGLPYHGYAWTLVNPNHNGIGAPTSGIAMTADGSMSYKYIKWFLRSYG--ATSM 127

Query: 312 YNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQ 371
           YN+TY VNY + GT W GFDDV+A+RAKI+YAKEK+LLGY  +QVS DD +W LSQAA  
Sbjct: 128 YNATYVVNYVTIGTTWIGFDDVQAIRAKISYAKEKKLLGYNVFQVSNDD-NWALSQAAQD 186

Query: 372 KDSITSASVDKDEHSSNRRLSIALISTAAAALTLLLG---CCAYKYNQMKRLNLIEEDSA 428
            D +         H   + L I ++    A L L+ G   CC   Y++ + L  I   S 
Sbjct: 187 DDKV---------HHKKQELLIKIL-VPIAVLILVAGSIMCC---YSRSRVLKAIGNFSV 233

Query: 429 KASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCG 488
           +             +FN N PNLRV+S A+I+ AT  FS  NKLGEGG+GPVYKG    G
Sbjct: 234 E-------------NFNSNAPNLRVFSFAEIKEATNNFSFENKLGEGGFGPVYKGKSQKG 280

Query: 489 EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
           E +AVK+LSKTS QG EEFKNEV LTAKLQHVNL+R+ GFC + EE+MLIYEYMPNKSLD
Sbjct: 281 EEMAVKRLSKTSNQGAEEFKNEVTLTAKLQHVNLVRLQGFCTEGEEKMLIYEYMPNKSLD 340

Query: 549 CYLF 552
            YLF
Sbjct: 341 FYLF 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565053|ref|XP_002523519.1| conserved hypothetical protein [Ricinus communis] gi|223537226|gb|EEF38858.1| conserved hypothetical protein [Ricinus communis]

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 205/445 (46%), Positives = 247/445 (55%), Gaps = 87/445 (19%)

Query: 110 MVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAK 169
           MV NS++R+SFIDSSIR ARLYGF+GLD +W + NTS +M N+  LF EWR AA   + +
Sbjct: 1   MVSNSTYRRSFIDSSIRRARLYGFQGLDLSWGSANTSDNMANLDTLFQEWR-AAVASEMR 59

Query: 170 NSTRQQSLLILTARFRYSPPANSYLL--NSIQRNLNWIHAVTASYYEPVSTNFTAPPAAL 227
           NS+   S LILTA   YSP  NS  L  +SIQRNLNW     A+ Y+P ST         
Sbjct: 60  NSS--MSELILTASVHYSPELNSISLPADSIQRNLNWFTHAHAALYDPRST--------- 108

Query: 228 YGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALY 287
                     +TD  + AW+ +GL A  LV+  PFYGYAWTL    +N IGA A GPA+ 
Sbjct: 109 ---------VNTDFGVGAWMNKGLIASTLVLSWPFYGYAWTLANSNNNSIGAPATGPAIT 159

Query: 288 DSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKR 347
           ++G +    IKN I+               VNY + G+ W  F DVEAVR K++YAKEK+
Sbjct: 160 ETGAMRCNDIKNFIQQ-------------SVNYCANGSTWICFHDVEAVRTKVSYAKEKK 206

Query: 348 LLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVDKDEHSSNRRLSIALISTAAAALTLLL 407
           LLGY  W VS DD +W LSQAA  +D        + +      L I L +TAAA L LL+
Sbjct: 207 LLGYVVWHVSNDD-NWELSQAAQLEDV-------QGQEKQPPSLVIILTTTAAAVL-LLI 257

Query: 408 GCCAYKYNQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFS 467
           G   Y    ++R   +    +K S    +    AG F  N                    
Sbjct: 258 GFMLY----IRRKRTLR---SKVSKLETDEAATAGYFGSN-------------------- 290

Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG 527
                          GVL  GE IAVKKLS TS QG EEFKNEVMLTAKLQHV L RVLG
Sbjct: 291 ---------------GVLVGGEEIAVKKLSNTSAQGSEEFKNEVMLTAKLQHVFLARVLG 335

Query: 528 FCIDSEERMLIYEYMPNKSLDCYLF 552
           FCID EE+MLIYEYMPNKSLD YLF
Sbjct: 336 FCIDREEQMLIYEYMPNKSLDYYLF 360

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	570
TAIR|locus:2134025	379	ChiC "class V chitinase" [Arab	0.640	0.963	0.368	7.1e-61
TAIR|locus:2134030	366	AT4G19820 [Arabidopsis thalian	0.624	0.972	0.352	7.5e-57
TAIR|locus:2133955	369	AT4G19760 [Arabidopsis thalian	0.575	0.888	0.384	1.6e-56
TAIR|locus:2133940	362	AT4G19750 [Arabidopsis thalian	0.549	0.864	0.395	6.8e-56
TAIR|locus:2134015	398	AT4G19800 [Arabidopsis thalian	0.550	0.788	0.365	1.8e-55
TAIR|locus:2134010	363	AT4G19720 [Arabidopsis thalian	0.596	0.936	0.359	2e-49
TAIR|locus:2134020	332	AT4G19730 [Arabidopsis thalian	0.559	0.960	0.345	1e-43
TAIR|locus:2133970	261	AT4G19770 [Arabidopsis thalian	0.443	0.969	0.384	6.6e-42
UNIPROTKB|O49974	848	KIK1 "Serine/threonine-protein	0.189	0.127	0.638	1.1e-29
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.228	0.166	0.514	1.5e-29

TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 139/377 (36%), Positives = 219/377 (58%)

Query:     5 IISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQ 64
             +IS+I     +  L  + A+  ++  Y   +    ++ I+  LFTHL C+ AD+NS T Q
Sbjct:     6 LISLIVSITFFLTLQCSMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQ 65

Query:    65 LSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSS 124
             +++S  +++ + + F  TV+++NPS+ T+LSIG G   + + Y+SM  N + RKSFIDSS
Sbjct:    66 VTVS-SANQPKFSTFTQTVQRRNPSVKTLLSIGGGI-ADKTAYASMASNPTSRKSFIDSS 123

Query:   125 IRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARF 184
             IR+AR YGF GLD  W  P+++T+M N G L  EWR +A   +A +S + + LL+  A F
Sbjct:   124 IRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWR-SAVVAEASSSGKPR-LLLAAAVF 181

Query:   185 RYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQV 242
              YS    S  Y ++++  +L+W++ +   +Y P  +  T PPAAL+   +     S D  
Sbjct:   182 -YSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNA--GPSGDAG 238

Query:   243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIK 302
              ++WI+ GL A K V+  P+YGYAW L     +   A   G A+   G + Y +I+  I 
Sbjct:   239 TRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIV 298

Query:   303 TYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
               G     +YNST   +Y   GT W G+DD +++  K+ YAK++ LLGY++W V  DD+ 
Sbjct:   299 DNG--ATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNS 356

Query:   363 WLLSQAAAQKDSITSAS 379
              L S+AA+Q    T+A+
Sbjct:   357 GL-SRAASQAWDATTAT 372

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0004568 "chitinase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0006032 "chitin catabolic process" evidence=IDA

GO:0008843 "endochitinase activity" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0035885 "exochitinase activity" evidence=IDA

TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 129/366 (35%), Positives = 209/366 (57%)

Query:     5 IISIIFHTLLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQ 64
             +ISI F   L   L  + A+  ++  Y      S ++ I+  LFTHL C+ ADIN+ TYQ
Sbjct:     6 LISITFFLSLL--LRFSSAQTVVKATYWFAESESPLAQIDSSLFTHLFCAFADINTLTYQ 63

Query:    65 LSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSS 124
             + +S   ++ + + F  TV+++NP++ T+LSIG     N++ ++SM  N + RK FI SS
Sbjct:    64 VIVS-SRNKPKFSTFTQTVRRRNPTVKTLLSIGGDFTYNFA-FASMASNPTSRKLFISSS 121

Query:   125 IRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARF 184
             I++AR  GF GLD  W  P+ +T+M N G L  EWR+A  + +A++S + + LL     +
Sbjct:   122 IKLARSCGFHGLDLNWKYPSITTEMDNFGKLLREWRLAV-EAEARSSGKPRLLLTAAVFY 180

Query:   185 RYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLK 244
              YS  +  + +N++  +L+W++ V   +YE  S+  T  PA LY  I+     S D  ++
Sbjct:   181 SYSYYSVLHPVNAVADSLDWVNLVAYDFYESGSSRVTCSPAPLYDPITT--GPSGDAGVR 238

Query:   245 AWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTY 304
             AW + GL A K V+  P YGYAW L   +++   A ++GPA+   G + Y +I+  I   
Sbjct:   239 AWTQAGLPAKKAVLGFPLYGYAWCLTDAKNHNYYANSSGPAISPDGSIGYDQIRRFI--V 296

Query:   305 GPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
                  ++YNS    NY      W G+DD +++  K+ YAK++ LLGY++W +  DD+   
Sbjct:   297 DNKATMVYNSNLVQNYCYAKKTWIGYDDNQSIVMKVKYAKQRGLLGYFSWHIGADDNS-R 355

Query:   365 LSQAAA 370
             LS+A +
Sbjct:   356 LSRAGS 361

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0004568 "chitinase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)]

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 131/341 (38%), Positives = 201/341 (58%)

Query:    34 LSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTI 93
             LS+ +  S I+  LFTHL C+ AD++S+T+++++S  ++  Q + F +TVK+KN  + T+
Sbjct:    31 LSQGTPSSFIDSTLFTHLFCAFADVDSSTHEVTISA-ANSYQFSSFTETVKEKNTDVQTL 89

Query:    94 LSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIG 153
             LSIG GKD + ++ +SM  NS +RK+FIDSSI IAR   F GLD AW  P+   +M N G
Sbjct:    90 LSIG-GKDADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWEYPSNDVEMTNFG 148

Query:   154 LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS--YLLNSIQRNLNWIHAVTAS 211
              L +EWR A   ++  + T Q  LL LTA   YSP  +   Y + +I  NL++++ +   
Sbjct:   149 KLLEEWRAAV--VEESDKTNQLPLL-LTAAVYYSPQYDGVEYPVKAIADNLDFVNIMAYD 205

Query:   212 YYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERG-LSADKLVMCLPFYGYAWTLV 270
             +Y P  +  T PPAAL+   S    RS +  L+ W++   L   K V+  P+ G+AWTL 
Sbjct:   206 FYGPGWSPVTGPPAALFHDPSNPAGRSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLE 265

Query:   271 KPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFS-TGTVWFG 329
               E+NG  AA  G A+   G +TY KI+N+I   G      ++    + ++   G  W G
Sbjct:   266 DAENNGYDAATDGAAISPDGSITYAKIRNYIVDNGA---ATFHDPAVIGFYCYVGNTWIG 322

Query:   330 FDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAA 370
             +DD +++  K+ YAK   LLGY++W V  D ++  LS+AA+
Sbjct:   323 YDDNQSIVYKVKYAKFTGLLGYFSWHVGAD-YNCGLSRAAS 362

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0004568 "chitinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 129/326 (39%), Positives = 191/326 (58%)

Query:    48 FTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIY 107
             FTHL C+ AD++S+T+++++S  ++  Q++ F  TVK KN  + T+LSIG GKD + ++ 
Sbjct:    37 FTHLFCAFADVDSSTHEVTISA-ANSCQVSSFTHTVKDKNTDVQTLLSIG-GKDADKAVL 94

Query:   108 SSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLD 167
             +SM  NS +RK+FIDSSI IAR   F GLD AW  P+   +M N G L  EWR A   ++
Sbjct:    95 ASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWEYPSNDVEMANFGKLVKEWRAAV--VE 152

Query:   168 AKNSTRQQSLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPA 225
               + T Q  LL LTA   YSP      Y + +I  NL++++ +   +Y P  +  T PPA
Sbjct:   153 ESDRTNQLPLL-LTAAVYYSPDYYGEEYPVQAIADNLDFVNIMAYDFYGPGWSPVTGPPA 211

Query:   226 ALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPA 285
             AL+   S    RS D  L  W+E  L A K V+   + G+AWTL   E+NG  AA  G A
Sbjct:   212 ALFDP-SNPAGRSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLEDAENNGYDAATDGAA 270

Query:   286 LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFS-TGTVWFGFDDVEAVRAKIAYAK 344
             +   G +TY KI+N+I   G      ++    + ++   GT W G+DD +++ +K+ YAK
Sbjct:   271 ISSDGSITYAKIRNYIIDNGA---ATFHDPAVIGFYCYVGTTWIGYDDNQSIVSKVRYAK 327

Query:   345 EKRLLGYYAWQVSFDDHDWLLSQAAA 370
              K LLGY++W V  D ++  LS+A +
Sbjct:   328 LKGLLGYFSWHVGAD-YNCGLSRAGS 352

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0004568 "chitinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 119/326 (36%), Positives = 189/326 (57%)

Query:    43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
             I+  LFTHL C+ AD+ + +Y+++++   ++     F +TV+++NP + T+LSIG G + 
Sbjct:    23 IDSSLFTHLFCTFADLEAESYEITIAT-WNQAPFHAFTETVQQRNPHVKTLLSIGGG-NA 80

Query:   103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
             +   ++SM  N   R SFI S+I +AR YGF GLD  W  P    +M++ G L +EWR A
Sbjct:    81 DKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNEEEMYDFGKLLEEWRSA 140

Query:   163 ATKLDAKNSTRQQSLLILTARFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVSTNF 220
                ++A++++   + LILTA   YS       Y + +I  +L+WI+ +   +Y P  +  
Sbjct:   141 ---VEAESNSSGTTALILTAAVYYSSNYQGVPYPVLAISNSLDWINLMAYDFYGPGWSTV 197

Query:   221 TAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAA 280
             T PPA+LY    GR   S D  ++ W E GL A K V+  P+YG+AWTL  P+ NG  A 
Sbjct:   198 TGPPASLYLPTDGR---SGDSGVRDWTEAGLPAKKAVLGFPYYGWAWTLADPDVNGYDAN 254

Query:   281 AAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKI 340
               GPA+ D G ++Y++++  I   G     +++     +Y   GT W G+D  +++  K+
Sbjct:   255 TTGPAISDDGEISYRQLQTWIVDNG--ATKVHDDMMVGDYCYAGTTWIGYDSEKSIVTKV 312

Query:   341 AYAKEKRLLGYYAWQVSFDDHDWLLS 366
              YAK+K LLGY++W V  DD+  L S
Sbjct:   313 IYAKQKGLLGYFSWHVGGDDNSELSS 338

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0004568 "chitinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 131/364 (35%), Positives = 201/364 (55%)

Query:    14 LYSELHPAKAKPWIRVGYLNLSEVSTI---SGINYD--LFTHLICSSADINSTTYQLSLS 68
             +Y+E+   KA  W   G  + +  S +   S +  D  LFTHL C+ AD++  T  + +S
Sbjct:     1 MYTEV--VKASYWFPDGASSPTTGSVVPQSSAVLIDSTLFTHLFCAFADLDPQTNSVVVS 58

Query:    69 LPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIA 128
               + E + + F   VKKKNP + T+LSIG G++ + S ++SM  N + RKSFI S+I  A
Sbjct:    59 -GAHEQEFSNFTKIVKKKNPHVQTLLSIG-GRNADKSAFASMASNPTSRKSFIWSAISSA 116

Query:   129 RLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSP 188
             R Y F GLD  W  P    +M N G L ++WR  A + DA+ + R    L+LTA   YSP
Sbjct:   117 RYYRFDGLDLVWKYPKDDVEMRNFGQLLEQWR-EAIEDDAERTERMP--LLLTAAVYYSP 173

Query:   189 PANS--YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAW 246
               +S  Y +  I++ L+W++ +   +Y   +T    PPAAL+   + +     D  LK W
Sbjct:   174 VYDSVSYPIREIKKKLDWVNLIAYDFYSSSTT--IGPPAALFDPSNPK-GPCGDYGLKEW 230

Query:   247 IERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGP 306
             I+ GL A K V+  P+ G+ W+L     +G  AA +  A    G + Y +IK  I  +  
Sbjct:   231 IKAGLPAKKAVLGFPYVGWTWSL----GSGNDAATSRVATSAEGSINYDQIKRLIVDH-- 284

Query:   307 DVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLS 366
               + +++ST   +Y   GT   G+DD ++V AK+ YAK+K LLGY++W V  DD+ + LS
Sbjct:   285 KARPVFDSTVVGDYCFAGTSLIGYDDHQSVVAKVKYAKQKGLLGYFSWHVGADDN-FGLS 343

Query:   367 QAAA 370
             +A +
Sbjct:   344 RAGS 347

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0004568 "chitinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 116/336 (34%), Positives = 182/336 (54%)

Query:    13 LLYSELHPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSD 72
             +L S     KA  W   G      +++   I   LFTHL C+ AD+++ ++++ +S  + 
Sbjct:     6 ILGSPSAEVKASYWFPDGETQ-DPITSAETIPSALFTHLFCAFADLDANSHKVFVS-QAH 63

Query:    73 ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG 132
             E   + F +TVK +NP + T+LSIG GK+ N S ++SM  N   RK+FIDS I IAR  G
Sbjct:    64 EFIFSTFTETVKIRNPQVKTLLSIG-GKNANNSAFASMASNHQSRKTFIDSWIFIARSNG 122

Query:   133 FRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
             F GLD AW  P +  +M + G L  E R AA + +++ S++    L+LTA   YS    +
Sbjct:   123 FHGLDLAWEYPYSDHEMTDFGNLVGELR-AAVEAESRRSSKPT--LLLTAAVYYSSVYKT 179

Query:   193 --YLLNSIQRNLNWIHAVTASYYEPVSTN-FTAPPAALYGSISGRFARSTDQVLKAWIER 249
               Y +  ++ +L+W++ +   +Y PVS++ FT P A L+ S S     S D  LK WI+ 
Sbjct:   180 FTYPVQVMRESLDWVNIIAYDFYGPVSSSKFTVPTAGLHVS-SNNEGPSGDSGLKQWIKD 238

Query:   250 GLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPA-----LYDSGLVTYKKIKNHIKTY 304
             GL   K V+   + G+AWTL   +D G  AAAAG A     + + G + Y +I   I+  
Sbjct:   239 GLPEKKAVLGFSYVGWAWTLQNDKDTGYNAAAAGVAKSEDDVSEDGSINYAQINKFIRD- 297

Query:   305 GPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKI 340
               +   +Y+     +Y     +W G++D ++V AK+
Sbjct:   298 -EEAAKVYDPKVVGHYCFAKKIWIGYEDTQSVEAKV 332

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0004568 "chitinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 101/263 (38%), Positives = 143/263 (54%)

Query:   110 MVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAK 169
             M  +S  RKSFI S+I IAR YGF GLD  W  P  + +M +   L  EWR A    +A 
Sbjct:     1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPRNAAEMSDFAELLKEWRYAVQG-EAY 59

Query:   170 NSTRQQSLLILTARFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAAL 227
             +S  +  +LILTA   YS   N   Y +  I   L+W++     +Y P  T  T PPAAL
Sbjct:    60 SS--ELPVLILTATVYYSSNYNGVVYPVKFISELLDWVNIKAYDFYGPGCTEVTGPPAAL 117

Query:   228 YGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALY 287
             Y    G    S D  +K WI+ GL A+K V+  P+YG+AWTL  P+++G      GPA+ 
Sbjct:   118 YLQSDGP---SGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTLADPKNHGYYVDTTGPAIS 174

Query:   288 DSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKR 347
             D G ++Y ++K  I         ++++    +Y   GT W G+D  E++  K+ YAK+K 
Sbjct:   175 DDGEISYSQLKTWI--VDNKATTVHDNIVIGDYCYAGTTWIGYDSEESIVTKVIYAKQKG 232

Query:   348 LLGYYAWQVSFDDHDWLLSQAAA 370
             LLGY++WQV  DD   L S  ++
Sbjct:   233 LLGYFSWQVGGDDKSELSSAGSS 255

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS

GO:0004568 "chitinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0043169 "cation binding" evidence=IEA

UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)]

 Score = 356 (130.4 bits), Expect = 1.1e-29, P = 1.1e-29
 Identities = 69/108 (63%), Positives = 82/108 (75%)

Query:   451 LRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNE 510
             L+VYSL  I  AT  FS  NKLGEGG+GPVY G LP GE +AVK+L + S QG EEFKNE
Sbjct:   515 LKVYSLDRIRTATSNFSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNE 574

Query:   511 VMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQK 558
             V+L AKLQH NL+R+LG CI  EE++L+YEYMPNKSLD +LF    Q+
Sbjct:   575 VILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQR 622

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
 Identities = 69/134 (51%), Positives = 95/134 (70%)

Query:   419 RLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYG 478
             RL   E ++ +  ++R ++  +  + +  +P L    L  +  AT  FS  NKLG+GG+G
Sbjct:   422 RLASSEIETLQRESSRVSSRKQEEE-DLELPFL---DLDTVSEATSGFSAGNKLGQGGFG 477

Query:   479 PVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI 538
             PVYKG L CG+ +AVK+LS+TS QG EEFKNE+ L AKLQH NL+++LG+C+D EERMLI
Sbjct:   478 PVYKGTLACGQEVAVKRLSRTSRQGVEEFKNEIKLIAKLQHRNLVKILGYCVDEEERMLI 537

Query:   539 YEYMPNKSLDCYLF 552
             YEY PNKSLD ++F
Sbjct:   538 YEYQPNKSLDSFIF 551

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.14	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	570
cd02879	299	cd02879, GH18_plant_chitinase_class_V, The class V	5e-94
smart00636	334	smart00636, Glyco_18, Glyco_18 domain	2e-63
pfam00704	325	pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam	3e-58
cd02872	362	cd02872, GH18_chitolectin_chitotriosidase, This co	2e-40
cd02873	413	cd02873, GH18_IDGF, The IDGF's (imaginal disc grow	7e-23
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-18
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-18
COG3325	441	COG3325, ChiA, Chitinase [Carbohydrate transport a	2e-17
cd06548	322	cd06548, GH18_chitinase, The GH18 (glycosyl hydrol	4e-17
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-16
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	9e-16
cd00598	210	cd00598, GH18_chitinase-like, The GH18 (glycosyl h	6e-14
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-12
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-11
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	4e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-11
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-10
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-10
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-09
cd02874	313	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm	2e-09
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	8e-09
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-08
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-08
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	5e-08
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	6e-08
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	7e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-08
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	8e-08
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	8e-08
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	3e-07
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	3e-07
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	3e-07
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-07
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	4e-07
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	4e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-06
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	6e-06
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	6e-06
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	7e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	8e-06
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-05
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	3e-05
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-05
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	4e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-05
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	6e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	6e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-04
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	3e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-04
COG3858	423	COG3858, COG3858, Predicted glycosyl hydrolase [Ge	3e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	4e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-04
cd06545	253	cd06545, GH18_3CO4_chitinase, The Bacteroides thet	6e-04
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	8e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	9e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.001
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.001
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	0.001
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	0.001
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.001
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.001
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.001
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.001
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	0.001
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.002
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.002
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.002
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.003
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.003
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.004

>gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes

 Score =  289 bits (741), Expect = 5e-94
 Identities = 133/348 (38%), Positives = 197/348 (56%), Gaps = 57/348 (16%)

Query: 25  PWIRVGY-LNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV 83
             ++ GY    SE    S I+  LFTHL  + AD++ +TY++ +S PSDE++ + F +TV
Sbjct: 2   TIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVIS-PSDESEFSTFTETV 60

Query: 84  KKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP 143
           K+KNPS+ T+LSIG G  ++ S +++M  + + RK+FI+SSI++AR YGF GLD  W  P
Sbjct: 61  KRKNPSVKTLLSIG-GGGSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFP 119

Query: 144 NTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSP------PANSYLLNS 197
           ++  +M N G L +EWR AA K +A++S R    L+LTA   +SP       + SY + +
Sbjct: 120 SSQVEMENFGKLLEEWR-AAVKDEARSSGRPP--LLLTAAVYFSPILFLSDDSVSYPIEA 176

Query: 198 IQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLV 257
           I +NL+W++ +   YY    +N T P AALY   S     STD  +K+WI+ G+ A KLV
Sbjct: 177 INKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSN---VSTDYGIKSWIKAGVPAKKLV 233

Query: 258 MCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE 317
           + LP YG AWTL                                          Y++T  
Sbjct: 234 LGLPLYGRAWTL------------------------------------------YDTTTV 251

Query: 318 VNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLL 365
            +Y   GT W G+DDV+++  K+ YAK+K LLGY+AW V +DD++WL 
Sbjct: 252 SSYVYAGTTWIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWLS 299

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299

>gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain

 Score =  210 bits (538), Expect = 2e-63
 Identities = 95/333 (28%), Positives = 147/333 (44%), Gaps = 27/333 (8%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
            +  I     TH+I + A+I+           +D     +    +KKKNP +  +LSIG 
Sbjct: 17  PVDDIPASKLTHIIYAFANIDPDGTVTIGDEWADIGNFGQLKA-LKKKNPGLKVLLSIG- 74

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP-NTSTDMFNIGLLFD 157
           G  T    +SSM+ + + RK FIDS +   + YGF G+D  W  P     D  N   L  
Sbjct: 75  G-WTESDNFSSMLSDPASRKKFIDSIVSFLKKYGFDGIDIDWEYPGGRGDDRENYTALLK 133

Query: 158 EWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL---LNSIQRNLNWIHAVTASYYE 214
           E R     LD + +  +    +LT      P         L +I + L++I+ +T  ++ 
Sbjct: 134 ELR---EALDKEGAEGKG--YLLTIAVPAGPDKIDKGYGDLPAIAKYLDFINLMTYDFHG 188

Query: 215 PVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPED 274
             S N T   A LY         + D  +K ++ +G+   KLV+ +PFYG  WTLV   +
Sbjct: 189 AWS-NPTGHNAPLYAGPGDPEKYNVDYAVKYYLCKGVPPSKLVLGIPFYGRGWTLVDGSN 247

Query: 275 NGIGAAAAGPA-----LYDSGLVTYKKIKNHI---KTYGPDVQVMYNSTYEVNYFSTGTV 326
           NG GA   GPA      ++ G+V Y++I   +     Y    +  Y       Y      
Sbjct: 248 NGPGAPFTGPATGGPGTWEGGVVDYREICKLLGATVVYDDTAKAPY------AYNPGTGQ 301

Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
           W  +DD  +++AK  Y K+K L G   W++  D
Sbjct: 302 WVSYDDPRSIKAKADYVKDKGLGGVMIWELDAD 334

Length = 334

>gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18

 Score =  196 bits (501), Expect = 3e-58
 Identities = 93/326 (28%), Positives = 149/326 (45%), Gaps = 23/326 (7%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQ---IAKFADTVKKKNPSITTILS 95
            +  I  D  TH+I + A+I+      + +   D+       +  D  K +NP +  +LS
Sbjct: 18  PLDDIPTDKLTHIIYAFANIDGNGTFGNNADTEDDGLKGCFEQLKDLKKCQNPGVKVLLS 77

Query: 96  IGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP-NTSTDMFNIGL 154
           IG G  T    +S +  + + RK+F DS I   + YGF G+D  W  P     D  N   
Sbjct: 78  IG-G-WTFSGGFSLLASDDAKRKTFADSIIDFLKKYGFDGIDIDWEYPGGKGDDKDNYTA 135

Query: 155 LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL-LNSIQRNLNWIHAVTASYY 213
           L  E R A  K             +L+A     P       +  I + L++I+ +T  ++
Sbjct: 136 LLKELRAALKKEAKAG-------YLLSAAVPAGPDKIDGSDIAKIGKYLDFINLMTYDFH 188

Query: 214 EPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPE 273
                N T P A LY        ++ D  ++ +++ G+ A KLV+ +PFYG  WTLV   
Sbjct: 189 GWS--NITGPNAPLYDGSW----QNVDYAVQYYLKAGVPASKLVLGIPFYGRGWTLVNGS 242

Query: 274 DNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDV 333
            NG GA A GP  ++ G+++YK+I   +K+        Y+ T +  Y   G  +  +DD 
Sbjct: 243 GNGGGAPAPGPGTWEGGILSYKEICALLKSGAGPG---YDDTAKAPYIYKGKQFVSYDDP 299

Query: 334 EAVRAKIAYAKEKRLLGYYAWQVSFD 359
            +++AK  Y K+K L G   W +  D
Sbjct: 300 RSIKAKAKYVKDKGLGGVMIWSLDQD 325

Length = 325

>gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases

 Score =  150 bits (380), Expect = 2e-40
 Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 32/339 (9%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSL--SLPSDENQIAKFADTVKKKNPSITTILSI 96
               I+  L TH+I + A +N     + L      D     +F   +K+KNP++ T+L+I
Sbjct: 19  VPENIDPFLCTHIIYAFAGLNPDGNIIILDEWNDIDLGLYERFNA-LKEKNPNLKTLLAI 77

Query: 97  GQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP----NTSTDMFNI 152
           G     + + +S+M  +  +RK+FI S+I   R YGF GLD  W  P        D  N 
Sbjct: 78  GGWNFGS-AKFSAMAASPENRKTFIKSAIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENF 136

Query: 153 GLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTA 210
             L  E R A    + +        L+LTA           +Y +  I + L++I+ +T 
Sbjct: 137 VTLLKELREA---FEPEAPR-----LLLTAAVSAGKETIDAAYDIPEISKYLDFINVMTY 188

Query: 211 SY---YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAW 267
            +   +E V T   +P  A       +   + D  +K W+ +G   +KLV+ +P YG ++
Sbjct: 189 DFHGSWEGV-TGHNSPLYAGSADTGDQKYLNVDYAIKYWLSKGAPPEKLVLGIPTYGRSF 247

Query: 268 TLVKPEDNGIGAAAAGPA-----LYDSGLVTYKKIKNHI-KTYGPDVQVMYNSTYEVNYF 321
           TL  P + G+GA A+GP        ++G + Y      I +       V+++   +V Y 
Sbjct: 248 TLASPSNTGVGAPASGPGTAGPYTREAGFLAY----YEICEFLKSGWTVVWDDEQKVPYA 303

Query: 322 STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
             G  W G+DD E++  K+ Y K K L G   W +  DD
Sbjct: 304 YKGNQWVGYDDEESIALKVQYLKSKGLGGAMVWSIDLDD 342

The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the large form being converted to the small form by either RNA or post-translational processing. Although the small form, containing the chitinase domain alone, is sufficient for the chitinolytic activity, the additional C-terminal chitin-binding domain of the large form plays a role in processing colloidal chitin. The chitotriosidase gene is nonessential in humans, as about 35% of the population are heterozygous and 6% homozygous for an inactivated form of the gene. HCGP39 is a 39-kDa human cartilage glycoprotein thought to play a role in connective tissue remodeling and defense against pathogens. Length = 362

>gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster

 Score =  100 bits (252), Expect = 7e-23
 Identities = 92/375 (24%), Positives = 155/375 (41%), Gaps = 76/375 (20%)

Query: 49  THLICSSADINSTTYQL-SLSLPSD-ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           THL+   A I++ TY++ SL+   D +    +   ++K+K P +  +LS+G  +DT+   
Sbjct: 32  THLVYGYAGIDADTYKIKSLNEDLDLDKSHYRAITSLKRKYPHLKVLLSVGGDRDTDEEG 91

Query: 107 ----YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP------------------- 143
               Y  ++ +S  R +FI+S+  + + YGF GLD AW  P                   
Sbjct: 92  ENEKYLLLLESSESRNAFINSAHSLLKTYGFDGLDLAWQFPKNKPKKVRGTFGSAWHSFK 151

Query: 144 NTSTDMFNIGLLFDEWRIAATKL--DAKNSTRQQSLLILTARFRYSPPANS---YLLNSI 198
              T    +     E +   T L  + KN+ R    L+LT      P  NS   + + +I
Sbjct: 152 KLFTGDSVVDEKAAEHKEQFTALVRELKNALR-PDGLLLT--LTVLPHVNSTWYFDVPAI 208

Query: 199 QRNLNWIHAVTASY----YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSAD 254
             N+++++  T  +      P   ++TAP   LY              +K W+ +G  A 
Sbjct: 209 ANNVDFVNLATFDFLTPERNPEEADYTAPIYELYERNPHHNVDYQ---VKYWLNQGTPAS 265

Query: 255 KLVMCLPFYGYAWTLVKPEDNGI----------GAAAAGPALYDSGLVTYKKI------K 298
           KL + +  YG AW L K  D+GI          G   AGP     GL+++ +I       
Sbjct: 266 KLNLGIATYGRAWKLTK--DSGITGVPPVLETDGPGPAGPQTKTPGLLSWPEICSKLPNP 323

Query: 299 NHIKTYGPDVQVMYNSTYEVNYFSTGT-------------VWFGFDDVEAVRAKIAYAKE 345
            ++K     ++ + + T        G+             +W  ++D +    K  YAK 
Sbjct: 324 ANLKGADAPLRKVGDPTKR-----FGSYAYRPADENGEHGIWVSYEDPDTAANKAGYAKA 378

Query: 346 KRLLGYYAWQVSFDD 360
           K L G   + +S DD
Sbjct: 379 KGLGGVALFDLSLDD 393

The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes. Length = 413

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 83.7 bits (208), Expect = 5e-18
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 471 KLGEGGYGPVYKGVL-----PCGEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIR 524
           KLGEG +G VYKG L          +AVK L +  S Q  EEF  E  +  KL H N+++
Sbjct: 6   KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +LG C + E   ++ EYM    L  YL
Sbjct: 66  LLGVCTEEEPLYIVMEYMEGGDLLSYL 92

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 83.8 bits (208), Expect = 5e-18
 Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 471 KLGEGGYGPVYKGVL-----PCGEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIR 524
           KLGEG +G VYKG L          +AVK L +  S Q  EEF  E  +  KL H N+++
Sbjct: 6   KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           +LG C + E  M++ EYMP   L  YL    ++     L    S+
Sbjct: 66  LLGVCTEEEPLMIVMEYMPGGDLLDYL--RKNRPKELSLSDLLSF 108

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism]

 Score = 84.8 bits (210), Expect = 2e-17
 Identities = 84/377 (22%), Positives = 140/377 (37%), Gaps = 63/377 (16%)

Query: 40  ISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFAD--------------TVKK 85
           ++ INY      I S      +      +L    N      D               +K 
Sbjct: 65  LTHINYAFLD--INSDGKSIESWVADEAALYGVPNIEGVELDPWSDPLKGHFGALFDLKA 122

Query: 86  KNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
             P + T++SIG   D+    +S M  + + R++F  S++   R YGF G+D  W  P +
Sbjct: 123 TYPDLKTLISIGGWSDSGG--FSDMAADDASRENFAKSAVEFMRTYGFDGVDIDWEYPGS 180

Query: 146 STDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL-- 194
             D  N G         LL  E R    KLD       +   +  A    +P +   L  
Sbjct: 181 GGDAGNCGRPKDKANYVLLLQELR---KKLDKAGVEDGRHYQLTIA----APASKDKLEG 233

Query: 195 --LNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSI------SGRFARSTDQVLKAW 246
                I + +++I+ +T  ++   +       AALYG+       +G F    +     W
Sbjct: 234 LNHAEIAQYVDYINIMTYDFHGAWN-ETLGHHAALYGTPKDPPLANGGFYVDAEVDGIDW 292

Query: 247 IERGLSAD----KLVMCLPFYGYAWTLVKPEDNGI------GAAAAGPAL--YDSGLVTY 294
           +E G + D    KLV+ +PFYG  W  V     G       G   +G     +++G    
Sbjct: 293 LEEGFAGDVPPSKLVLGMPFYGRGWNGVDGGSLGTCPGLYQGLDNSGIPKGTWEAGNGDK 352

Query: 295 KKIKNHI----KTYGPDVQVMYNSTYEVNYF--STGTVWFGFDDVEAVRAKIAYAKEKRL 348
              K +            +  ++   +  Y       V+  +DD  +V+AK  Y  +  L
Sbjct: 353 DYGKAYDLDANNAGKNGYERYWDDVAKAPYLYNPEKGVFISYDDPRSVKAKAEYVADNNL 412

Query: 349 LGYYAWQVSFDDHDWLL 365
            G   W++S D++  LL
Sbjct: 413 GGMMFWEISGDENGVLL 429

Length = 441

>gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites

 Score = 82.3 bits (204), Expect = 4e-17
 Identities = 80/349 (22%), Positives = 125/349 (35%), Gaps = 79/349 (22%)

Query: 43  INYDLFTHLICSSADINS--TTYQLSLSLPSDENQIAKFADTV---------------KK 85
           I  D  TH+  + ADI+              +  Q                       K+
Sbjct: 21  IPADKLTHINYAFADIDGDGGVVTSDDEAADEAAQSVDGGADTDDQPLKGNFGQLRKLKQ 80

Query: 86  KNPSITTILSIGQ-GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPN 144
           KNP +  +LSIG       +S         + R  F DS++   R YGF G+D  W  P 
Sbjct: 81  KNPHLKILLSIGGWTWSGGFS---DAAATEASRAKFADSAVDFIRKYGFDGIDIDWEYPG 137

Query: 145 T---------STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL- 194
           +           D  N  LL  E R     LDA  +   +  L+  A    +P     L 
Sbjct: 138 SGGAPGNVARPEDKENFTLLLKELR---EALDALGAETGRKYLLTIA----APAGPDKLD 190

Query: 195 ---LNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR-STDQVLKAWIERG 250
              +  I + L++I+ +T  ++   S N T   + LY S +      S D  +  ++  G
Sbjct: 191 KLEVAEIAKYLDFINLMTYDFHGAWS-NTTGHHSNLYASPADPPGGYSVDAAVNYYLSAG 249

Query: 251 LSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQV 310
           +  +KLV+ +PFYG  WT      +     A  P LY+                      
Sbjct: 250 VPPEKLVLGVPFYGRGWTGYTRYWD---EVAKAPYLYN---------------------- 284

Query: 311 MYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
                       +   +  +DD  +++AK  Y K+K L G   W++S D
Sbjct: 285 -----------PSTKTFISYDDPRSIKAKADYVKDKGLGGVMFWELSGD 322

The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. Length = 322

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 78.3 bits (194), Expect = 4e-16
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 8/88 (9%)

Query: 471 KLGEGGYGPVYKGVL------PCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLI 523
           KLGEG +G VYKG L         +V AVK L + ++ +  EEF  E  +  KL H N++
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKV-AVKTLKEGASEEEREEFLEEASIMKKLSHPNIV 64

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           R+LG C   E   ++ EYMP   L  +L
Sbjct: 65  RLLGVCTQGEPLYIVTEYMPGGDLLDFL 92

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 77.2 bits (191), Expect = 9e-16
 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 5/87 (5%)

Query: 470 NKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIR 524
            KLGEG +G VYKG L    G+    AVK L +  S +  ++F  E  +  KL H N++R
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +LG C + E   L+ EYM    L  YL
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYL 87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods

 Score = 70.5 bits (173), Expect = 6e-14
 Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 29/192 (15%)

Query: 29  VGYLNLSEVSTISG---INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKK 85
           + Y +            I   L TH+I + A+I+S          S+E         +  
Sbjct: 2   ICYYDGWSSGRGPDPTDIPLSLCTHIIYAFAEISSDGSLNLFGDKSEEPLKGALE-ELAS 60

Query: 86  KNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
           K P +  ++SIG       S   ++  + + R +F +S +   + YGF G+D  W  P  
Sbjct: 61  KKPGLKVLISIGGW---TDSSPFTLASDPASRAAFANSLVSFLKTYGFDGVDIDWEYPGA 117

Query: 146 S--TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN------SYLLNS 197
           +  +D  N   L  E R   + L A N        +LT     + PA+      +Y + +
Sbjct: 118 ADNSDRENFITLLRELR---SALGAAN-------YLLTI----AVPASYFDLGYAYDVPA 163

Query: 198 IQRNLNWIHAVT 209
           I   +++++ +T
Sbjct: 164 IGDYVDFVNVMT 175

Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model. Length = 210

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 70.6 bits (174), Expect = 1e-13
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHVNLI 523
           + I  KLGEG +G VY       G+++A+K + K   +   E    E+ +  KL+H N++
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           R+     D ++  L+ EY         LF L  ++     ++   Y
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGD----LFDLLKKRGRLSEDEARFY 102

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
           LGEGG+G VY       G+ +A+K + K  S+   EE   E+ +  KL H N++++ G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 530 IDSEERMLIYEYMPNKSLDCYL 551
            D     L+ EY    SL   L
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLL 82

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 67.7 bits (166), Expect = 2e-12
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLG 527
           KLG G +G VYK      G+++AVK L K S   +  +  + E+ +  +L H N++R++ 
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 528 FCIDSEERMLIYEYMPNKSLDCYL 551
              D +   L+ EY     L  YL
Sbjct: 66  AFEDKDHLYLVMEYCEGGDLFDYL 89

Length = 260

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 66.7 bits (163), Expect = 4e-12
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 472 LGEGGYGPVYKG--VLPCGE----VIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIR 524
           LGEG +G VYKG    P        +A+K L +    +  +EF+ E  L + LQH N++ 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +LG C   +   +++EY+ +  L  +L
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVN 521
            + + + +G G +G VYKG+ L  G+ +A+K++S      +  +    E+ L   L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSL 547
           +++ +G    S+   +I EY  N SL
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSL 86

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 63.6 bits (155), Expect = 4e-11
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 7/86 (8%)

Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKL-SKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKGV +P GE +    A+K L  +TS +  +E  +E  + A + H +++R+
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
           LG C+ S +  LI + MP   L  Y+
Sbjct: 75  LGICL-SSQVQLITQLMPLGCLLDYV 99

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 63.3 bits (155), Expect = 4e-11
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 465 RFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKK--LSKTSTQGFEEFKNEVMLTAKLQHVN 521
            ++    LG G +G VY  +    GE++AVK   LS  S +  E  + E+ + + LQH N
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 522 LIRVLGFCIDSEERML-IY-EYMPNKSL 547
           ++R  G   D E+  L I+ EY+   SL
Sbjct: 61  IVRYYGSERDEEKNTLNIFLEYVSGGSL 88

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 62.1 bits (151), Expect = 1e-10
 Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 7/87 (8%)

Query: 472 LGEGGYGPVYKG----VLPCGE--VIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHVNLIR 524
           LGEG +G V+ G    + P  +  ++AVK L +T++    + F+ E  L    QH N+++
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
             G C + +  ++++EYM +  L+ +L
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFL 99

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 472 LGEGGYGPVYKG----VLPCGE---VIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLI 523
           LG G +G VY+G    +L  G     +AVK L K +T Q  +EF  E  L +   H N++
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTY 560
           ++LG C+ +E + +I E M    L  YL     ++  
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFG 99

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 467 SIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           ++++KLG G YG VY+GV       +AVK L K  T   EEF  E  +  +++H NL+++
Sbjct: 9   TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 67

Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
           LG C       +I E+M   +L  YL
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYL 93

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 31/136 (22%)

Query: 245 AWIERGLS-------ADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKI 297
            W+ER L         +K+++ +P YGY WTL  P   G  A+           ++ ++ 
Sbjct: 193 GWVERVLQYAVTQIPREKILLGIPLYGYDWTL--PYKKGGKAST----------ISPQQA 240

Query: 298 KNHIKTYGPDVQVMYNSTYEVNYFS-------TGTVWFGFDDVEAVRAKIAYAKEKRLLG 350
            N  K YG ++Q  Y+   +  +F           VWF  +D  +++AK   AKE  L G
Sbjct: 241 INLAKRYGAEIQ--YDEEAQSPFFRYVDEQGRRHEVWF--EDARSLQAKFELAKEYGLRG 296

Query: 351 YYAWQVSF-DDHDWLL 365
              W++   D  +WLL
Sbjct: 297 VSYWRLGLEDPQNWLL 312

CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis. Length = 313

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 56.7 bits (137), Expect = 8e-09
 Identities = 28/92 (30%), Positives = 45/92 (48%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E F++  KLG G +G V++G+      +A+K L        ++F+ EV    +L+H
Sbjct: 2   ERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRH 61

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            +LI +   C   E   +I E M   SL  +L
Sbjct: 62  KHLISLFAVCSVGEPVYIITELMEKGSLLAFL 93

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 55.3 bits (133), Expect = 2e-08
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 6/84 (7%)

Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLS------KTSTQGFEEFKNEVMLTAKLQHVNLI 523
             LG+G YG VY G+   G++IAVK++         + + +E+ + EV L   L+HVN++
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 524 RVLGFCIDSEERMLIYEYMPNKSL 547
           + LG C+D     +  E++P  S+
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSI 89

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 54.4 bits (131), Expect = 4e-08
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNLIRVLGFC 529
           K+G+G +G VYKGVL     +AVK    T       +F  E  +  +  H N+++++G C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 530 IDSEERMLIYEYMPNKSLDCYL 551
           +  +   ++ E +P  SL  +L
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFL 83

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 54.1 bits (131), Expect = 4e-08
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 466 FSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
           F I  K+G+GG+G VYK      G+ +A+K +   S +  E+  NE+ +  K +H N+++
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 525 VLGFCIDSEERMLIYEYMPNKSLD 548
             G  +  +E  ++ E+    SL 
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLK 85

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 54.2 bits (130), Expect = 5e-08
 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 471 KLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
           +LGEG +G V+      +LP  +  ++AVK L + S    ++F+ E  L   LQH +++R
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
             G C +    ++++EYM +  L+ +L
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 53.9 bits (130), Expect = 6e-08
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 467 SIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHV 520
           +I   +G G +G V +G L          +A+K L   S+     +F  E  +  +  H 
Sbjct: 7   TIEKVIGGGEFGEVCRGRLKLPGKKE-IDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHP 65

Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           N+IR+ G    S   M+I EYM N SLD +L
Sbjct: 66  NIIRLEGVVTKSRPVMIITEYMENGSLDKFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 54.0 bits (130), Expect = 7e-08
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 15/91 (16%)

Query: 472 LGEGGYGPVYKGVLPC---------GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
           LG+G +G V      C         GEV+AVKKL  ++ +   +F+ E+ +   LQH N+
Sbjct: 12  LGKGNFGSVEL----CRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNI 67

Query: 523 IRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
           ++  G C  +  R   L+ EY+P  SL  YL
Sbjct: 68  VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYL 98

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 53.6 bits (129), Expect = 7e-08
 Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 10/97 (10%)

Query: 470 NKLGEGGYGPVYKGVLP-----CGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNL 522
            +LGEG +G V            GE +AVK L   S   Q   +F+ E+ +   L H N+
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL-NHSGEEQHRSDFEREIEILRTLDHENI 68

Query: 523 IRVLGFCIDSEER--MLIYEYMPNKSLDCYLFGLSHQ 557
           ++  G C     R   LI EY+P+ SL  YL     Q
Sbjct: 69  VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQ 105

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 53.7 bits (129), Expect = 8e-08
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 472 LGEGGYGPVYKGVLPCGEV----IAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LGEG +G V +G L   +     +AVK  KL   +    EEF +E        H N++++
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 526 LGFCIDSEER------MLIYEYMPNKSLDCYLF 552
           +G C ++         M+I  +M +  L  +L 
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLL 99

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 53.7 bits (129), Expect = 8e-08
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 472 LGEGGYGPVYK----GVLPCGE--VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIR 524
           +G+G +G V++    G+LP     ++AVK L +  S     +F+ E  L A+  H N+++
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +LG C   +   L++EYM    L+ +L
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFL 99

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 464 ERFSIR--NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           +R SI+   KLG G +G V++G+      +AVK L K  T   ++F  E  +  KL+H  
Sbjct: 4   DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPK 62

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           LI++   C   E   ++ E M   SL  YL
Sbjct: 63  LIQLYAVCTLEEPIYIVTELMKYGSLLEYL 92

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           E   +  KLG G +G V+ G       +AVK L K  T   E F  E  +  KL+H  L+
Sbjct: 6   ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLV 64

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++   C + E   ++ EYM   SL  +L
Sbjct: 65  QLYAVCSEEEPIYIVTEYMSKGSLLDFL 92

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
           +G+G +G V  G    G+ +AVK L   ST   + F  E  +   L+H NL+++LG  + 
Sbjct: 14  IGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAA-QAFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 532 SEERMLIYEYMPNKSLDCYL 551
                ++ EYM   SL  YL
Sbjct: 72  GNPLYIVTEYMAKGSLVDYL 91

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 51.9 bits (124), Expect = 3e-07
 Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           ++ +LGEG +G V+      + P  +  ++AVK L   +    ++F+ E  L   LQH +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +++  G C D +  ++++EYM +  L+ +L
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 52.0 bits (124), Expect = 3e-07
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 9/101 (8%)

Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVL---PCGE---VIAVKKLS-KTSTQGFEEFKNE 510
           +I  +T RF    +LGE  +G VYKG L     GE    +A+K L  K      EEFK+E
Sbjct: 1   EINLSTVRF--MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHE 58

Query: 511 VMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            M+ ++LQH N++ +LG     +   +I+ Y  +  L  +L
Sbjct: 59  AMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 52.0 bits (124), Expect = 3e-07
 Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 6/90 (6%)

Query: 468 IRNKLGEGGYGPVYKGVL--PCGE----VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           ++ +LGEG +G V+       C E    ++AVK L   S    ++F  E  L   LQH +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 68

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +++  G C++ +  ++++EYM +  L+ +L
Sbjct: 69  IVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 51.9 bits (124), Expect = 4e-07
 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 16/108 (14%)

Query: 460 EAATERFSIRNKLGEGGYGPVY----KGVL-----PCGE------VIAVKKL-SKTSTQG 503
           E   ++  ++ KLGEG +G V+    +G+         E      ++AVK L +  +   
Sbjct: 1   EFPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA 60

Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             +F  E+ + ++L++ N+IR+LG C+  +   +I EYM N  L+ +L
Sbjct: 61  RNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFL 108

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 7/86 (8%)

Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE +    A+K L++T+  +   EF +E ++ A + H +L+R+
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
           LG C+ S    L+ + MP+  L  Y+
Sbjct: 75  LGVCL-SPTIQLVTQLMPHGCLLDYV 99

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 18/110 (16%)

Query: 460 EAATERFSIRNKLGEGGYGPVY----------------KGVLPCGEV-IAVKKLSKTSTQ 502
           E   +  +   KLGEG +G V+                +       V +AVK L   ++ 
Sbjct: 1   EFPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD 60

Query: 503 -GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
              E+F  EV + ++L   N+ R+LG C       +I EYM N  L+ +L
Sbjct: 61  NAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGV---LPCGEV---IAVKKLSKTSTQGFEE-FKNEVM 512
           E   +  ++   LG G +G VY+G+        V   +AVK L ++ ++  E  F  E +
Sbjct: 2   EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL 61

Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           + +K  H N++R++G   +   R ++ E M    L  +L
Sbjct: 62  IMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFL 100

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)

Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN--EVMLTAKLQ-HVNLIRVL 526
           +LG+G +G VY       GE++A+KK+ K     +EE  N  EV    KL  H N++++ 
Sbjct: 6   QLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64

Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGL--SHQKTYF 561
               +++E   ++EYM     +  L+ L    +   F
Sbjct: 65  EVFRENDELYFVFEYM-----EGNLYQLMKDRKGKPF 96

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 8/83 (9%)

Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKKLS-----KTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VY+G+ L  G+  AVK++S     +T  +  ++ + E+ L +KLQH N+++ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 526 LGFCIDSEERMLIY-EYMPNKSL 547
           LG     E+ + I+ E +P  SL
Sbjct: 68  LG-TEREEDNLYIFLELVPGGSL 89

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
           E + +  ++G G YG VYK   +  GE++A+K +       FE  + E+ +  + +H N+
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI 62

Query: 523 IRVLG 527
           +   G
Sbjct: 63  VAYFG 67

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 48.4 bits (115), Expect = 3e-06
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF---EEFKNEVMLTAKLQHVNLIRVLG 527
           ++G G +G V+ G       +A+K    T  +G    E+F  E  +  KL H  L+++ G
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIK----TIREGAMSEEDFIEEAQVMMKLSHPKLVQLYG 66

Query: 528 FCIDSEERMLIYEYMPNKSLDCYLF---GLSHQKTYFGL 563
            C +     L++E+M +  L  YL    G   Q+T  G+
Sbjct: 67  VCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGM 105

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 472 LGEGGYGPVYKGVLPCGE------VIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIR 524
           LG G +G V+       E      ++ VK L KT  +  + EF+ E+ +  KL H N++R
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72

Query: 525 VLGFCIDSEERMLIYEY 541
           +LG C ++E   +I EY
Sbjct: 73  LLGLCREAEPHYMILEY 89

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 48.0 bits (114), Expect = 6e-06
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 18/106 (16%)

Query: 464 ERFSIRNKLGEGGYGPVY------KGVLPCGE-----------VIAVKKLSKTSTQGFE- 505
                + KLGEG +G V+         LP  +           ++AVK L   + +    
Sbjct: 5   GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARN 64

Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +F  EV + ++L+  N+IR+LG C+D +   +I EYM N  L+ +L
Sbjct: 65  DFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 48.0 bits (114), Expect = 7e-06
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 18/110 (16%)

Query: 460 EAATERFSIRNKLGEGGYGPVY----KGVLP-------------CGEVIAVKKL-SKTST 501
           E   +R + + KLGEG +G V+    +G+                  ++AVK L    + 
Sbjct: 1   EFPRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANK 60

Query: 502 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
               +F  E+ + ++L+  N+IR+L  CI S+   +I EYM N  L+ +L
Sbjct: 61  NARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 47.5 bits (114), Expect = 8e-06
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 12/107 (11%)

Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKLQHVNL 522
           +    ++GEG YG VYK      GE++A+KK+  +   +GF      E+ L  KL+H N+
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI 60

Query: 523 IRVLGFCIDSEER---MLIYEYMP---NKSLDC--YLFGLSHQKTYF 561
           +R+      S+ +    +++EYM       LD     F  S  K Y 
Sbjct: 61  VRLKEIVT-SKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYM 106

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHVNLIRVL 526
           +G G +G V++G+L       V    KT   G+ E     F +E  +  +  H N+IR+ 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 527 GFCIDSEERMLIYEYMPNKSLDCYL 551
           G     +  M+I EYM N +LD YL
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYL 97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)

Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSK--TSTQGFEE-FKNEVMLTAKLQH-VN 521
           + I  KLGEG +G VY       +++A+K L+K   S     E F  E+ + A L H  N
Sbjct: 2   YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPN 59

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++++  F  D     L+ EY+   SL+  L
Sbjct: 60  IVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89

Length = 384

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 471 KLGEGGYGPVYKG--VLPCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRV 525
           KLG+G +G V +G      G+VI  AVK L         ++F  E  +   L H NLIR+
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 526 LGFCIDSEERMLIYEYMPNKSL-DC 549
            G  +     M++ E  P  SL D 
Sbjct: 62  YGVVLTH-PLMMVTELAPLGSLLDR 85

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
           E F I  KLGEG YG VYK +    G+V+A+K +     +  +E   E+ +  +     +
Sbjct: 3   EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYI 60

Query: 523 IRVLGFCIDSEERMLIYEY 541
           ++  G    + +  ++ EY
Sbjct: 61  VKYYGSYFKNTDLWIVMEY 79

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 470 NKLGEGGYGPVYKGV--LPCGEVI--AVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG G +G V KGV  +  G+ +  AVK L +     G +EF  E  + A+L H  ++R
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++G C   E  ML+ E  P   L  YL
Sbjct: 61  LIGVCK-GEPLMLVMELAPLGPLLKYL 86

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG G +G V+ G       +AVK L K  T   + F  E  L   LQH
Sbjct: 2   EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 60

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSL 547
             L+R+       E   +I EYM   SL
Sbjct: 61  DKLVRLYAVVTKEEPIYIITEYMAKGSL 88

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 45.5 bits (108), Expect = 3e-05
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 6/98 (6%)

Query: 459 IEAATERFSIRNKLGEGGYGPVYKGV--LPCGEVIAVK-KLSKTSTQG--FEEFKNEVML 513
            E   E  ++   +GEG +G VY+GV   P  E IAV  K  K  T     E+F  E  +
Sbjct: 1   YEIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYI 60

Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             +  H ++++++G   +     ++ E  P   L  YL
Sbjct: 61  MRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYL 97

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 45.3 bits (107), Expect = 4e-05
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 472 LGEGGYGPVYKGV------LPCGEVIAVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIR 524
           LGEG +G V K              +AVK L + ++     +  +E  L  ++ H ++I+
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
           + G C      +LI EY    SL  +L
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFL 94

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 45.5 bits (108), Expect = 4e-05
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 4/77 (5%)

Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFK-NEVMLTAKLQHVNLIRVLGF 528
           KLGEG Y  VYKG     GE++A+K++   + +G       E+ L  +L+H N++R L  
Sbjct: 7   KLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVR-LHD 65

Query: 529 CIDSEER-MLIYEYMPN 544
            I +E + ML++EYM  
Sbjct: 66  VIHTENKLMLVFEYMDK 82

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 45.3 bits (107), Expect = 4e-05
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 14/91 (15%)

Query: 472 LGEGGYGPVYKGVLPC--------GEVIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHVNL 522
           LGEG +G V    L C        GE++AVK L +   Q     +K E+ +   L H N+
Sbjct: 12  LGEGHFGKV---SLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68

Query: 523 IRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
           ++  G C +   +   LI EY+P  SL  YL
Sbjct: 69  VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 45.4 bits (107), Expect = 4e-05
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 471 KLGEGGYGPVYKG--VLPC---GEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIR 524
           +LGE  +G +YKG   LP     +++A+K L    + Q + EF+ E  L A+L H N++ 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +LG     +   +++EY+    L  +L
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFL 98

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 44.8 bits (106), Expect = 5e-05
 Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG G +G V+ G       +A+K L K  +   E F  E  L  +LQH
Sbjct: 2   EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQH 60

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             L+R L   +  E   +I EYM N SL  +L
Sbjct: 61  PRLVR-LYAVVTQEPIYIITEYMENGSLVDFL 91

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 45.0 bits (106), Expect = 6e-05
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)

Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE +    A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 15  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74

Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 75  LGICLTSTVQ-LITQLMP 91

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 466 FSIRNKLGEGGYGPVYKGVLPC-GEVIAVKK--LSKTSTQGFEEFKNEVMLTAKLQHVNL 522
           F I NK+G+G +G V+K V      V A+K+  LSK + +  EE  +E  + AKL    +
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           IR     +D  +  ++ EY  N  L   L
Sbjct: 62  IRYYESFLDKGKLNIVMEYAENGDLHKLL 90

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 44.5 bits (105), Expect = 6e-05
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 468 IRNKLGEGGYGPVYKGVL-PCGE---VIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNL 522
           I   +G G +G V +G L   G+    +A+K L    T +   +F +E  +  +  H N+
Sbjct: 8   IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI 67

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           I + G    S   M+I E+M N +LD +L
Sbjct: 68  IHLEGVVTKSRPVMIITEFMENGALDSFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 44.0 bits (105), Expect = 1e-04
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 17/87 (19%)

Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKK---------LSKTSTQGFEEFKNEVMLTA 515
           +    KLGEG YG VYK      GE++A+KK         +  T+ +       E+ L  
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALR-------EISLLK 53

Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYM 542
           +L+H N++++L       +  L++EY 
Sbjct: 54  ELKHPNIVKLLDVIHTERKLYLVFEYC 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)

Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
           LG G +G V+ G       +A+K + +      ++F  E  +  KL H NL+++ G C  
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMI-REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 532 SEERMLIYEYMPNKSLDCYL 551
                ++ EYM N  L  YL
Sbjct: 71  QRPIFIVTEYMANGCLLNYL 90

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 6/85 (7%)

Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVNLIRVLG 527
           K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H N++++L 
Sbjct: 7   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 66

Query: 528 FCIDSEERM-LIYEYMPNKSLDCYL 551
             I +E ++ L++E++ ++ L  ++
Sbjct: 67  -VIHTENKLYLVFEFL-HQDLKKFM 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           R+   NK+G G +G VY  V L  GE++AVK  ++     +  +E  +E+ +   L+H N
Sbjct: 1   RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPN 60

Query: 522 LIRVLGFCIDSEERMLIYEY 541
           L++  G  +  E+  +  EY
Sbjct: 61  LVKYYGVEVHREKVYIFMEY 80

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 7/82 (8%)

Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKL-SKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G V+KG+ +P G+ I    A+K +  ++  Q F+E  + ++    L H  ++R+
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 526 LGFCIDSEERMLIYEYMPNKSL 547
           LG C  +  + L+ +  P  SL
Sbjct: 75  LGICPGASLQ-LVTQLSPLGSL 95

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 459 IEAATERFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTSTQGFEE-----FKNEV 511
           I+A+     I   +G G +G V  G L  P    I V    KT   G+ E     F +E 
Sbjct: 1   IDAS--CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVA--IKTLKAGYTEKQRRDFLSEA 56

Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            +  +  H N+I + G    S+  M++ EYM N SLD +L
Sbjct: 57  SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 11/90 (12%)

Query: 472 LGEGGYGPVYKGVL----------PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           LG+G +  +YKGVL          P  EV  V K+  +  +    F     L ++L H +
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           L+++ G C+  E  M + EY+    LD +L
Sbjct: 63  LVKLYGVCVRDENIM-VEEYVKFGPLDVFL 91

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 42.7 bits (100), Expect = 3e-04
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 4/93 (4%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG G +G V+ G       +AVK L K  T   E F  E  +  KL+H
Sbjct: 2   EIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRH 60

Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYL 551
             L+++  + + SEE + ++ EYM   SL  +L
Sbjct: 61  DKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 42.7 bits (100), Expect = 3e-04
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 2   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 60

Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 61  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 93

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 465 RFSIRNKLGEGGYGPVYKGVL---PCGEVIAVKKL--SKTSTQGFEEFK-NEVMLTAKLQ 518
           ++ I   +G G YG VYK        G+  A+KK    K    G  +    E+ L  +L+
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK 60

Query: 519 HVNLIRVLGFCIDSEERM--LIYEY 541
           H N++ ++   ++  ++   L+++Y
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDY 85

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 465 RFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKK--LSKTSTQGFEEFKNEVMLTAKLQHVN 521
            F +  KLG+G YG VYK   L   +  A+K+  L   S +  E+  NE+ + A + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 522 LIRVLGFCIDSEERMLIYEYMP 543
           +I      +D  +  ++ EY P
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAP 82

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 42.6 bits (101), Expect = 3e-04
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 19/111 (17%)

Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN-----EVMLTAKLQ 518
           R+    KLGEG Y  VYK      G ++A+KK+     +  ++  N     E+ L  +L+
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 519 HVNLIRVLG-FCIDSEERMLIYEYMP--------NKSLDCYLFGLSHQKTY 560
           H N+I +L  F   S    L++E+M         +KS+   +   +  K+Y
Sbjct: 61  HPNIIGLLDVFGHKSNIN-LVFEFMETDLEKVIKDKSI---VLTPADIKSY 107

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only]

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 16/130 (12%)

Query: 246 WIERGL-------SADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIK 298
           W+ + +        A+K++M +P YGY WTL   +  G  A A  P   D  +    +  
Sbjct: 298 WVRKVIEYALTVIPAEKVMMGIPLYGYDWTL-PYDPLGYLARAISP---DEAIDIANRYN 353

Query: 299 NHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSF 358
             I+ Y    Q  +    +        VW  F+D  + + K+   KE  L G   W +  
Sbjct: 354 ATIQ-YDATSQSPFFYYVDKEG-RYHEVW--FEDARSFQTKLDLIKEYGLRGVSYWVLGQ 409

Query: 359 DDHD-WLLSQ 367
           +D   W    
Sbjct: 410 EDPRNWTYLP 419

Length = 423

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 472 LGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
           LG+G YG VY       +V IA+K++ +  ++  +    E+ L + L+H N+++ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 531 DSEERMLIYEYMPNKSLDCYL 551
           ++    +  E +P  SL   L
Sbjct: 76  ENGFFKIFMEQVPGGSLSALL 96

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 14/90 (15%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFK--------NEVML 513
              F I  K+G+G +  VYK + L  G V+A+KK+     Q FE            E+ L
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKV-----QIFEMMDAKARQDCLKEIDL 55

Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMP 543
             +L H N+I+ L   I++ E  ++ E   
Sbjct: 56  LKQLDHPNVIKYLASFIENNELNIVLELAD 85

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 42.2 bits (99), Expect = 4e-04
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 470 NKLGEGGYGPVYKGVLPCGEVIA---VKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRV 525
           +++G G +G V  G    G   A   VK+L  ++T      F  EV    +L H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
           LG CI+S   +L+ E+ P   L  YL
Sbjct: 61  LGQCIESIPYLLVLEFCPLGDLKNYL 86

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 472 LGEGGYGPVYKGVLPCGEVI---AVK--KLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
           LGEG +G V +G L   + I   AVK  K++  +    E+F +E +   +  H N++R++
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 527 GFCIDSEER------MLIYEYMPNKSLDCYLF 552
           G C+ + E       ++I  +M +  L  +L 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLL 98

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKK--LSKTSTQG-------FEEFKNEVMLTAKLQHVN 521
           +G G +G VY G+    GE++AVK+  L   S           +    E+ L  +LQH N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSL 547
           +++ LG  +D++   +  EY+P  S+
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSV 93

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTSTQGFEEFKN----EVMLTAKLQ 518
            ++ +   +GEG YG V K      GE++A+KK  K S +  E+ K     EV +  +L+
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKF-KES-EDDEDVKKTALREVKVLRQLR 58

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
           H N++ +           L++EY+    L+
Sbjct: 59  HENIVNLKEAFRRKGRLYLVFEYVERTLLE 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas

 Score = 41.3 bits (97), Expect = 6e-04
 Identities = 55/258 (21%), Positives = 93/258 (36%), Gaps = 51/258 (19%)

Query: 29  VGYLNLS--EVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
           VGYL       +    I++   TH+  + A+ ++      L+     +++    +     
Sbjct: 2   VGYLPNYDDLNALSPTIDFSKLTHINLAFANPDANGT---LNANPVRSELNSVVNAAHAH 58

Query: 87  NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT- 145
           N  I   L+ G         +++ + + + RK+ +D  I     Y   G+D     P+  
Sbjct: 59  NVKILISLAGGSP-----PEFTAALNDPAKRKALVDKIINYVVSYNLDGIDVDLEGPDVT 113

Query: 146 --STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLN 203
                +F   L           L  +         +LTA       A S        N  
Sbjct: 114 FGDYLVFIRAL--------YAALKKEG-------KLLTA-------AVS------SWNGG 145

Query: 204 WIHAVTASYYEPV---STNFTAPPAALYGSISGRFARSTDQVLKAWIERGL-SADKLVMC 259
            +   T +Y++ +   S + T P           +  + +  L  W ERGL S DKLV+ 
Sbjct: 146 AVSDSTLAYFDFINIMSYDATGPWWGDNPGQHSSYDDAVND-LNYWNERGLASKDKLVLG 204

Query: 260 LPFYGYAWTLVKPEDNGI 277
           LPFYGY +       NGI
Sbjct: 205 LPFYGYGFYY-----NGI 217

Length = 253

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 41.0 bits (96), Expect = 8e-04
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 472 LGEGGYGPVYKG----VLPCGEV----IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           LG+G +  ++KG    V   GE+    + +K L K+     E F     + ++L H +L+
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
              G C+  +E +++ EY+   SLD YL
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYL 90

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 41.4 bits (98), Expect = 9e-04
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 18/74 (24%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN---------EVML 513
            ++ I  KLG+G YG V+K +     EV+A+KK+       F+ F+N         E+M 
Sbjct: 7   RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKI-------FDAFRNATDAQRTFREIMF 59

Query: 514 TAKL-QHVNLIRVL 526
             +L  H N++++L
Sbjct: 60  LQELGDHPNIVKLL 73

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)

Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIRVLGFCI 530
           LG+G +G V+KG L     +AVK   +   Q  + +F +E  +  +  H N+++++G C 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 531 DSEERMLIYEYMPNKSLDCYL 551
             +   ++ E +P      +L
Sbjct: 63  QRQPIYIVMELVPGGDFLSFL 83

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 11/101 (10%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGV---LPCGEV---IAVKKLSKTSTQGFE-EFKNE-- 510
           E   E+ ++  +LG+G +G VY+G+   +  GE    +A+K +++ ++     EF NE  
Sbjct: 2   ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEAS 61

Query: 511 VMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           VM      HV  +R+LG     +  +++ E M    L  YL
Sbjct: 62  VMKEFNCHHV--VRLLGVVSTGQPTLVVMELMAKGDLKSYL 100

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 41.8 bits (98), Expect = 0.001
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 470 NKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGF 528
           N +  G  G  YKG      +   VK+++  ++       +E+    KLQH N+++++G 
Sbjct: 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----SSEIADMGKLQHPNIVKLIGL 751

Query: 529 CIDSEERMLIYEYMPNKSLDCYLFGLSHQK 558
           C   +   LI+EY+  K+L   L  LS ++
Sbjct: 752 CRSEKGAYLIHEYIEGKNLSEVLRNLSWER 781

Length = 968

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKK-LSKTSTQGFE-EFKNEVMLTAKLQ 518
               + I  KLGEG +G VYK   +  G V+A+KK L      GF      E+ +  KL+
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65

Query: 519 HVNLIRVLGFCID-----SEERMLIYEYMP 543
           H N++ ++   ++       +R  +Y   P
Sbjct: 66  HPNVVPLIDMAVERPDKSKRKRGSVYMVTP 95

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 9/103 (8%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKT-STQGFEEFKNEV 511
           E A E+ ++  +LG+G +G VY+G+   G V       +A+K +++  S +   EF NE 
Sbjct: 2   EVAREKITMSRELGQGSFGMVYEGIAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEA 60

Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
            +  +    +++R+LG     +  ++I E M    L  YL  L
Sbjct: 61  SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 103

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 11/104 (10%)

Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
           +G+G +G VY G L    G+ I  AVK L++ T  +  E+F  E ++     H N++ +L
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
           G C+ SE   +++  YM +  L  ++   +H  T      FGL+
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQ 106

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST-QGFEEFK-NEVMLTAKLQHVNLIRVLG 527
           K+GEG YG VYKG     G+++A+KK+   S  +G       E+ L  +LQH N++ +  
Sbjct: 7   KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQD 66

Query: 528 FCIDSEERMLIYEYM 542
             +      LI+E++
Sbjct: 67  VLMQESRLYLIFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            E +    K+GEG  G VYK      G+ +A+KK+     Q  E   NE+++    +H N
Sbjct: 18  RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRK-QNKELIINEILIMKDCKHPN 76

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSL 547
           ++      +  +E  ++ EYM   SL
Sbjct: 77  IVDYYDSYLVGDELWVVMEYMDGGSL 102

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVNLIRVLG 527
           K+GEG YG V+K       E++A+K++      +G       E+ L  +L+H N++R+  
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66

Query: 528 FCIDSEERMLIYEY 541
                ++  L++EY
Sbjct: 67  VLHSDKKLTLVFEY 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 17/101 (16%)

Query: 464 ERF--SIRNKLGEGGYGPV----YKGVLP----CGEVIAVKKLS-KTSTQGFEEFKNEVM 512
           +RF   IR+ LGEG +G V    Y    P     GE +AVK L  ++      + K E+ 
Sbjct: 3   KRFLKRIRD-LGEGHFGKVELCRYD---PEGDNTGEQVAVKSLKPESGGNHIADLKKEIE 58

Query: 513 LTAKLQHVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
           +   L H N+++  G C +       LI E++P+ SL  YL
Sbjct: 59  ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 11/104 (10%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGV---LPCGEV---IAVKKLSKT-STQGFEEFKNE-- 510
           E + E+ ++  +LG+G +G VY+G    +  GE    +AVK ++++ S +   EF NE  
Sbjct: 2   EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 61

Query: 511 VMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
           VM      HV  +R+LG     +  +++ E M +  L  YL  L
Sbjct: 62  VMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 103

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 0.002
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVNLIRVLG 527
           K+GEG YG VYK      GE++A+KK+  +  ++G  +    E+ L  +L H N+I++L 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 528 FCIDSEERMLIYEYM 542
                 +  L++E+M
Sbjct: 66  VFRHKGDLYLVFEFM 80

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 13/88 (14%)

Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKK--LSKTSTQGFEE--------FKNEVMLTAKLQHV 520
           +G+G YG VY  + +  GE++AVK+  L  T     +          ++E+     L H+
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 521 NLIRVLGFCIDSEERMLIY-EYMPNKSL 547
           N+++ LGF   +EE + I+ EY+P  S+
Sbjct: 69  NIVQYLGF-ETTEEYLSIFLEYVPGGSI 95

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 13/96 (13%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAK 516
           +   ++F I  ++GEG YG VYK      GE++A+KK+      +GF      E+ +  +
Sbjct: 3   KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ 62

Query: 517 LQHVNLIRVLGFCIDSEERM----------LIYEYM 542
           L H N++ +     D ++ +          L++EYM
Sbjct: 63  LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYM 98

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
           + +  ++G G YG VYK   L  GE+ AVK +       F   + E+ +  + +H N++ 
Sbjct: 11  YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVA 70

Query: 525 VLGFCIDSEERMLIYEYMPNKSL-DCY 550
             G  +  E+  +  EY    SL D Y
Sbjct: 71  YFGSYLSREKLWICMEYCGGGSLQDIY 97

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	570
cd02879	299	GH18_plant_chitinase_class_V The class V plant chi	100.0
cd02873	413	GH18_IDGF The IDGF's (imaginal disc growth factors	100.0
cd02872	362	GH18_chitolectin_chitotriosidase This conserved do	100.0
KOG2806	432	consensus Chitinase [Carbohydrate transport and me	100.0
COG3325	441	ChiA Chitinase [Carbohydrate transport and metabol	100.0
cd02878	345	GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin	100.0
smart00636	334	Glyco_18 Glycosyl hydrolase family 18.	100.0
cd06548	322	GH18_chitinase The GH18 (glycosyl hydrolases, fami	100.0
PF00704	343	Glyco_hydro_18: Glycosyl hydrolases family 18; Int	100.0
cd02876	318	GH18_SI-CLP Stabilin-1 interacting chitinase-like	100.0
cd02875	358	GH18_chitobiase Chitobiase (also known as di-N-ace	100.0
cd02874	313	GH18_CFLE_spore_hydrolase Cortical fragment-lytic	100.0
cd06545	253	GH18_3CO4_chitinase The Bacteroides thetaiotaomicr	100.0
cd06549	298	GH18_trifunctional GH18 domain of an uncharacteriz	100.0
cd00598	210	GH18_chitinase-like The GH18 (glycosyl hydrolase,	100.0
cd06544	253	GH18_narbonin Narbonin is a plant 2S protein from	100.0
cd06546	256	GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase	100.0
COG3858	423	Predicted glycosyl hydrolase [General function pre	100.0
cd02871	312	GH18_chitinase_D-like GH18 domain of Chitinase D (	99.97
KOG2091	392	consensus Predicted member of glycosyl hydrolase f	99.92
cd06542	255	GH18_EndoS-like Endo-beta-N-acetylglucosaminidases	99.91
cd02877	280	GH18_hevamine_XipI_class_III This conserved domain	99.86
cd06543	294	GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch	99.85
COG3469	332	Chitinase [Carbohydrate transport and metabolism]	99.77
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.75
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.73
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.7
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.66
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.56
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.56
KOG3653	534	consensus Transforming growth factor beta/activin	99.54
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.5
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.48
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.46
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.45
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.36
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.36
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.29
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.25
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.24
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.24
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.23
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.22
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.19
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.16
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.13
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.11
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.1
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.1
KOG4701	568	consensus Chitinase [Cell wall/membrane/envelope b	99.09
KOG0605	550	consensus NDR and related serine/threonine kinases	99.08
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.08
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.08
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.08
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.07
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.05
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.05
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.05
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.04
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.04
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.04
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.04
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.03
PHA02988	283	hypothetical protein; Provisional	99.03
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.02
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.02
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.01
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.99
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.99
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.99
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.98
PTZ00267	478	NIMA-related protein kinase; Provisional	98.98
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.98
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.98
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.97
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.96
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.96
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.96
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.96
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.95
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.95
KOG4721	904	consensus Serine/threonine protein kinase, contain	98.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.95
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.94
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.94
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.94
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.94
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.94
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.93
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.93
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.93
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.93
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.93
KOG0198	313	consensus MEKK and related serine/threonine protei	98.92
KOG0610	459	consensus Putative serine/threonine protein kinase	98.92
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.92
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.92
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.91
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.91
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.91
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.9
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.9
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.9
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.9
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.9
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.9
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.9
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.89
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.89
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.89
KOG0586	596	consensus Serine/threonine protein kinase [General	98.89
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.89
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.89
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.89
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.89
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.89
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.88
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.88
KOG0589	426	consensus Serine/threonine protein kinase [General	98.88
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.88
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.88
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.88
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.88
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.88
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.88
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.88
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.87
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.87
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.87
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.87
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.87
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.87
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.87
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.86
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.86
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.86
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.86
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.86
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.86
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.86
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.86
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.86
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.86
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.86
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.86
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.86
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.86
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.85
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.85
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.85
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.85
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.85
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.85
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.85
KOG0578	550	consensus p21-activated serine/threonine protein k	98.84
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.84
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.84
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.84
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.84
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.83
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.83
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.82
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.82
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.82
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.82
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.82
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.82
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.82
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.82
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.82
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.82
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.82
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.82
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.81
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.81
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.81
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.81
PTZ00283	496	serine/threonine protein kinase; Provisional	98.81
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.81
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.81
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.81
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.81
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.81
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.81
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.81
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.81
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.81
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.81
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.81
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.8
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.8
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.8
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.8
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.8
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.8
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.79
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.79
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.79
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.79
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.79
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.79
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.79
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.79
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.79
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.79
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.79
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.78
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.78
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.78
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.78
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.78
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.78
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.78
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.78
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.78
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.78
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.78
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.78
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.78
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.77
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.77
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.77
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.77
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.77
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.77
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.77
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.77
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.76
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.76
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.76
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.76
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.76
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.75
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.75
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.75
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.75
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.75
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.75
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.75
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.75
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.75
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.75
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.75
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.74
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.74
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.74
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.74
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.74
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.74
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.74
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.74
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.74
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.74
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.74
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.74
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.73
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.73
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.73
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.73
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.72
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.72
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.72
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.72
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.72
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.72
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.71
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.71
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.71
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.7
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.7
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.7
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.7
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.69
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.69
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.69
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.69
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.69
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.68
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.68
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.68
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.68
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.67
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.67
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.67
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.67
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.66
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.66
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.66
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.66
PHA03212	391	serine/threonine kinase US3; Provisional	98.66
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.66
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.65
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.65
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.65
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.65
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.65
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.64
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.64
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.64
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.64
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.64
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.64
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.64
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.64
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.64
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.64
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.63
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.63
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.62
PHA03211	461	serine/threonine kinase US3; Provisional	98.62
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.61
PTZ00036	440	glycogen synthase kinase; Provisional	98.61
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.61
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.6
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.6
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.6
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.59
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.59
PRK09188	365	serine/threonine protein kinase; Provisional	98.59
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.59
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.57
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.57
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.57
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.57
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.57
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.57
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.57
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.56
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.55
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.55
PLN00009	294	cyclin-dependent kinase A; Provisional	98.55
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.54
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.52
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.51
PHA03209	357	serine/threonine kinase US3; Provisional	98.51
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.5
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.5
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.5
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.49
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.49
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.48
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.48
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.47
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.47
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.46
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.46
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.46
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.46
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.45
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.45
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.44
PHA03207	392	serine/threonine kinase US3; Provisional	98.43
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.43
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.41
cd06547	339	GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG	98.41
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.41
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.41
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.4
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.4
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.4
PRK10345	210	hypothetical protein; Provisional	98.4
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.4
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.39
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.39
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.39
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.37
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.36
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.35
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.35
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.35
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.35
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.34
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.34
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.34
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.34
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.29
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.27
KOG0584	632	consensus Serine/threonine protein kinase [General	98.27
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.25
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.25
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.23
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.23
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.22
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.22
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.2
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.19
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.18
PTZ00284	467	protein kinase; Provisional	98.17
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.13
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.13
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.12
PRK14879	211	serine/threonine protein kinase; Provisional	98.09
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.06
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.06
PHA03210	501	serine/threonine kinase US3; Provisional	98.05
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.04
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.02
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.95
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.94
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.92
KOG1152	772	consensus Signal transduction serine/threonine kin	97.87
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.86
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.84
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.83
PF03644	311	Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int	97.77
KOG0695	593	consensus Serine/threonine protein kinase [Signal	97.76
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.68
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.63
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.6
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.56
PF02638	311	DUF187: Glycosyl hydrolase like GH101; InterPro: I	97.54
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.45
PF13200	316	DUF4015: Putative glycosyl hydrolase domain	97.42
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.42
smart00090	237	RIO RIO-like kinase.	97.4
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.37
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.35
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.3
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.21
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.16
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.15
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.13
PHA02882	294	putative serine/threonine kinase; Provisional	97.05
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.01
PRK12274	218	serine/threonine protein kinase; Provisional	96.93
PF11340	181	DUF3142: Protein of unknown function (DUF3142); In	96.88
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.73
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.73
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	96.69
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.64
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	96.62
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.59
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.54
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	96.29
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.07
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	95.74
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	95.72
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.49
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	94.86
KOG2331	526	consensus Predicted glycosylhydrolase [General fun	94.81
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	94.7
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	94.56
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	93.83
PF15102	146	TMEM154: TMEM154 protein family	90.96
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	90.66
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	88.85
COG0661	517	AarF Predicted unusual protein kinase [General fun	88.1
PF14883	294	GHL13: Hypothetical glycosyl hydrolase family 13	87.78
KOG1243	690	consensus Protein kinase [General function predict	85.53
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	85.19
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	84.09
PRK10593	297	hypothetical protein; Provisional	83.11
PRK12568	730	glycogen branching enzyme; Provisional	82.14
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	80.92
PRK12313	633	glycogen branching enzyme; Provisional	80.52
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	80.32
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	80.28
PRK09550	401	mtnK methylthioribose kinase; Reviewed	80.18

>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes

Probab=100.00  E-value=1.1e-64  Score=497.63  Aligned_cols=288  Identities=43%  Similarity=0.810  Sum_probs=252.0

Q ss_pred             eEEEEEecCCC-CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCc
Q 008332           26 WIRVGYLNLSE-VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY  104 (570)
Q Consensus        26 ~~vvgY~~~~~-~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~  104 (570)
                      -+++|||++|+ .+++++||+++||||+|+|+.++++++.+...+ .++..+..+.+.+|+++|++|+++|||||+. ++
T Consensus         3 ~~~~~Y~~~w~~~~~~~~i~~~~~THi~yaf~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~~lkvlisiGG~~~-~s   80 (299)
T cd02879           3 IVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISP-SDESEFSTFTETVKRKNPSVKTLLSIGGGGS-DS   80 (299)
T ss_pred             eEEEEEECCCCCCCChhHCCcccCCEEEEEEEEecCCCCEEeecc-ccHHHHHHHHHHHHHhCCCCeEEEEEeCCCC-CC
Confidence            57899999998 899999999999999999999999877776654 3455677888889999999999999999875 46


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeec
Q 008332          105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARF  184 (570)
Q Consensus       105 ~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~  184 (570)
                      ..|+.+++++++|++||+++++++++|+|||||||||||..++|+.+|+.|+++||++|+......+   +..+++++++
T Consensus        81 ~~fs~~~~~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~~~d~~n~~~ll~elr~~l~~~~~~~~---~~~~~ls~av  157 (299)
T cd02879          81 SAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQVEMENFGKLLEEWRAAVKDEARSSG---RPPLLLTAAV  157 (299)
T ss_pred             chhhHHhCCHHHHHHHHHHHHHHHHHhCCCceeecccCCCChhHHHHHHHHHHHHHHHHHHHhhccC---CCcEEEEeec
Confidence            7899999999999999999999999999999999999998788999999999999999985322211   2345666666


Q ss_pred             ccCC------CCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCceee
Q 008332          185 RYSP------PANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVM  258 (570)
Q Consensus       185 ~~~~------~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~Klvl  258 (570)
                      +..+      ....|+++++.++|||||||+||++|+|....++|+|||+....   ..+++.+|++|++.|+|++||+|
T Consensus       158 ~~~~~~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~g~~~~~~~~~~a~l~~~~~---~~~~~~~v~~~~~~g~p~~Klvl  234 (299)
T cd02879         158 YFSPILFLSDDSVSYPIEAINKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNS---NVSTDYGIKSWIKAGVPAKKLVL  234 (299)
T ss_pred             ccchhhccccccccCCHHHHHhhCCEEEEEeecccCCCCCCCCCCCCcCCCCCC---CCCHHHHHHHHHHcCCCHHHEEE
Confidence            5443      23578999999999999999999999998777899999997543   35899999999999999999999


Q ss_pred             eccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHH
Q 008332          259 CLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRA  338 (570)
Q Consensus       259 Gip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~  338 (570)
                      |||||||.|++                                          ||+.+..+|...+++||+|||++|++.
T Consensus       235 Gvp~YGr~~~~------------------------------------------~D~~~~~~y~~~~~~wi~ydd~~Si~~  272 (299)
T cd02879         235 GLPLYGRAWTL------------------------------------------YDTTTVSSYVYAGTTWIGYDDVQSIAV  272 (299)
T ss_pred             Eeccccccccc------------------------------------------cCCCcceEEEEECCEEEEeCCHHHHHH
Confidence            99999999953                                          566777788888899999999999999


Q ss_pred             HHHhhhccCCceEEEEEccccChhh
Q 008332          339 KIAYAKEKRLLGYYAWQVSFDDHDW  363 (570)
Q Consensus       339 K~~~~~~~gLgGv~~W~l~~Dd~~~  363 (570)
                      |++||+++||||+|+|++++||+++
T Consensus       273 K~~~a~~~~lgGv~~W~l~~Dd~~~  297 (299)
T cd02879         273 KVKYAKQKGLLGYFAWAVGYDDNNW  297 (299)
T ss_pred             HHHHHHhCCCCeEEEEEeecCCccc
Confidence            9999999999999999999999885

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.

>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster

Probab=100.00  E-value=5.7e-64  Score=512.48  Aligned_cols=327  Identities=24%  Similarity=0.406  Sum_probs=261.9

Q ss_pred             EEEEEecCCC-------CCcCCCCCCCC--cceEEEEeEEEeCCceEEeeCCCccH---HHHHHHHHHHHhhCCCceEEE
Q 008332           27 IRVGYLNLSE-------VSTISGINYDL--FTHLICSSADINSTTYQLSLSLPSDE---NQIAKFADTVKKKNPSITTIL   94 (570)
Q Consensus        27 ~vvgY~~~~~-------~~~~~~i~~~~--~Thii~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~lk~~~~~~kvll   94 (570)
                      +|||||+.|+       .+.+++||..+  ||||+|+|+.++++++.+...+...+   ..+.++. .||++||++|+|+
T Consensus         1 ~vvcyy~~~a~~r~~~~~~~~~~i~~~~~~~THl~yaf~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~lk~~~p~lKvll   79 (413)
T cd02873           1 KLVCYYDSKSYLREGLAKMSLEDLEPALQFCTHLVYGYAGIDADTYKIKSLNEDLDLDKSHYRAIT-SLKRKYPHLKVLL   79 (413)
T ss_pred             CEEEEecchhhcCCCCCeeCHHHcCCccccCCeEEEEEEEEeCCCCEEEecCcccchhhhHHHHHH-HHHhhCCCCeEEE
Confidence            4799999985       45789999865  99999999999998777765443322   4566665 5999999999999


Q ss_pred             EEcCCCCCC----cccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC-------------------------
Q 008332           95 SIGQGKDTN----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT-------------------------  145 (570)
Q Consensus        95 sigg~~~~~----~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~-------------------------  145 (570)
                      |||||..++    +..|+.+++++++|++||+++++||++|+|||||||||||+.                         
T Consensus        80 SiGGw~~~~~~~~s~~fs~~~~~~~~R~~Fi~siv~~l~~~~fDGidiDWEyP~~~~~~~~g~~~~~~~~~~~~~~g~~~  159 (413)
T cd02873          80 SVGGDRDTDEEGENEKYLLLLESSESRNAFINSAHSLLKTYGFDGLDLAWQFPKNKPKKVRGTFGSAWHSFKKLFTGDSV  159 (413)
T ss_pred             eecCCCCCCCcccchhhHHHhCCHHHHHHHHHHHHHHHHHcCCCCeEeeeeCCCCcccccccccchhhhhhhcccccccc
Confidence            999997532    457999999999999999999999999999999999999953                         


Q ss_pred             -----CCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCC-
Q 008332          146 -----STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTN-  219 (570)
Q Consensus       146 -----~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~-  219 (570)
                           ++|++||+.|+++||++|+..        ...++++++... .....||+++|.++|||||||+||+|++|... 
T Consensus       160 ~~~~~~~d~~nf~~Ll~elr~~l~~~--------~~~ls~av~~~~-~~~~~~d~~~l~~~vD~inlMtYD~~g~~~~~~  230 (413)
T cd02873         160 VDEKAAEHKEQFTALVRELKNALRPD--------GLLLTLTVLPHV-NSTWYFDVPAIANNVDFVNLATFDFLTPERNPE  230 (413)
T ss_pred             cCCCChhHHHHHHHHHHHHHHHhccc--------CcEEEEEecCCc-hhccccCHHHHhhcCCEEEEEEecccCCCCCCC
Confidence                 357889999999999999731        233444332211 12245899999999999999999999998754 


Q ss_pred             CCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCC-C-------CCCCCCCCCCCCCCCc
Q 008332          220 FTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPED-N-------GIGAAAAGPALYDSGL  291 (570)
Q Consensus       220 ~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~-~-------~~g~~~~g~~~~~~g~  291 (570)
                      .++++|||+.........+++.+|++|++.|+|++||+||||||||.|+++++.. .       ..|....|+++.++|.
T Consensus       231 ~~~~~apL~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~w~l~~~~~~~g~~~~~~~~g~~~~G~~~~~~g~  310 (413)
T cd02873         231 EADYTAPIYELYERNPHHNVDYQVKYWLNQGTPASKLNLGIATYGRAWKLTKDSGITGVPPVLETDGPGPAGPQTKTPGL  310 (413)
T ss_pred             ccCcCCccCCCccccccccHHHHHHHHHHcCCCHHHeEEEEecceeeeEccCCCCCcCCCCCccCCCCCCCCCCcCCCcc
Confidence            6899999996543333469999999999999999999999999999999886532 1       1233345667788899


Q ss_pred             ccHHHHHHHHhhCC------CCeEEeecCceE-EEEee-------cCCEEEeccCHHHHHHHHHhhhccCCceEEEEEcc
Q 008332          292 VTYKKIKNHIKTYG------PDVQVMYNSTYE-VNYFS-------TGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVS  357 (570)
Q Consensus       292 ~~y~~i~~~~~~~~------~~~~~~~d~~~~-~~y~~-------~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~  357 (570)
                      ++|.|||..+...+      ..++..||.+.. .+|..       .+++||+|||++|++.|++|++++||||+|+|+++
T Consensus       311 l~y~ei~~~~~~~~~~~g~~~~~~~~~d~~~~~~~y~y~~~d~~~~~~~wvsydd~~Si~~K~~y~~~~gLgGv~~W~l~  390 (413)
T cd02873         311 LSWPEICSKLPNPANLKGADAPLRKVGDPTKRFGSYAYRPADENGEHGIWVSYEDPDTAANKAGYAKAKGLGGVALFDLS  390 (413)
T ss_pred             ccHHHHHHhhccCccccccccceeEeecccccccceEEeccccCCCCCeEEEeCCHHHHHHHHHHHHhCCCceEEEEeee
Confidence            99999998776431      124566887655 36654       23689999999999999999999999999999999


Q ss_pred             ccChhh
Q 008332          358 FDDHDW  363 (570)
Q Consensus       358 ~Dd~~~  363 (570)
                      +||+..
T Consensus       391 ~DD~~g  396 (413)
T cd02873         391 LDDFRG  396 (413)
T ss_pred             cCcCCC
Confidence            999754

The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes.

>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases

Probab=100.00  E-value=1.5e-62  Score=500.08  Aligned_cols=322  Identities=30%  Similarity=0.497  Sum_probs=272.7

Q ss_pred             EEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCc--cHHHHHHHHHHHHhhCCCceEEEEEcC
Q 008332           28 RVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPS--DENQIAKFADTVKKKNPSITTILSIGQ   98 (570)
Q Consensus        28 vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~lk~~~~~~kvllsigg   98 (570)
                      |||||++|+       .+.+++||+++||||+|+|+.+++++.........  +...+.++. .+|+++|++|+++||||
T Consensus         1 v~~y~~~w~~~~~~~~~~~~~~i~~~~~Thv~y~f~~i~~~g~~~~~~~~~d~~~~~~~~~~-~lk~~~p~lkvlisiGG   79 (362)
T cd02872           1 VVCYFTNWAQYRPGNGKFVPENIDPFLCTHIIYAFAGLNPDGNIIILDEWNDIDLGLYERFN-ALKEKNPNLKTLLAIGG   79 (362)
T ss_pred             CEEEECcchhcCCCCCCcChhHCCcccCCEEEEeeEEECCCCCEEecCchhhhhhhHHHHHH-HHHhhCCCceEEEEEcC
Confidence            689999986       46789999999999999999999987444333322  244566664 59999999999999999


Q ss_pred             CCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC----CCCccchhhhHHHHHHHHhhhhhcccccc
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDEWRIAATKLDAKNSTRQ  174 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~----~~~~~~~~~l~~~lr~~l~~~~~~~~~~~  174 (570)
                      |.. .+..|+.++++++.|++||+++++++++|+|||||||||+|..    ++|+.+|+.|+++||++|++.        
T Consensus        80 ~~~-~~~~f~~~~~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~p~~~~~~~~d~~~~~~ll~~lr~~l~~~--------  150 (362)
T cd02872          80 WNF-GSAKFSAMAASPENRKTFIKSAIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENFVTLLKELREAFEPE--------  150 (362)
T ss_pred             CCC-CcchhHHHhCCHHHHHHHHHHHHHHHHHcCCCCeeeeeeccccCCCCHHHHHHHHHHHHHHHHHHHhh--------
Confidence            875 4457999999999999999999999999999999999999964    468899999999999999842        


Q ss_pred             cceEEEEeecccCCC--CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCC---CCccCHHHHHHHHHHc
Q 008332          175 QSLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISG---RFARSTDQVLKAWIER  249 (570)
Q Consensus       175 ~~~~~~~~~~~~~~~--~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~---~~~~~v~~~v~~~~~~  249 (570)
                      ...+.++++++....  ...||++++.+++|+|+||+||++++|. ..+|++|||+.....   ....+++.+|++|++.
T Consensus       151 ~~~~~ls~av~~~~~~~~~~~d~~~l~~~vD~v~vmtYD~~~~~~-~~~g~~spl~~~~~~~~~~~~~~v~~~v~~~~~~  229 (362)
T cd02872         151 APRLLLTAAVSAGKETIDAAYDIPEISKYLDFINVMTYDFHGSWE-GVTGHNSPLYAGSADTGDQKYLNVDYAIKYWLSK  229 (362)
T ss_pred             CcCeEEEEEecCChHHHhhcCCHHHHhhhcceEEEecccCCCCCC-CCCCCCCCCCCCCCCccccccccHHHHHHHHHHc
Confidence            124555555554432  3579999999999999999999999875 469999999976543   2345899999999999


Q ss_pred             CCCCCceeeeccccccceeccCCCCCCCCCCCCCC-----CCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecC
Q 008332          250 GLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGP-----ALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTG  324 (570)
Q Consensus       250 gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~-----~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~  324 (570)
                      |+|++||+||||+|||.|++.++.+++.|++..|+     .+..+|.++|.|||+.+ ..+  ++..||+.+..||...+
T Consensus       230 gvp~~KlvlGlp~YG~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~g~~~y~ei~~~~-~~~--~~~~~D~~~~~~y~~~~  306 (362)
T cd02872         230 GAPPEKLVLGIPTYGRSFTLASPSNTGVGAPASGPGTAGPYTREAGFLAYYEICEFL-KSG--WTVVWDDEQKVPYAYKG  306 (362)
T ss_pred             CCCHHHeEeccccccceeeecCCccCCCCCccCCCCCCCCCcCCCccchHHHHHHhh-cCC--cEEEEeCCcceeEEEEC
Confidence            99999999999999999999887777777776544     35678999999999987 444  88999999999999889


Q ss_pred             CEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhh
Q 008332          325 TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDW  363 (570)
Q Consensus       325 ~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~  363 (570)
                      ++||+|||++|++.|++|++++||||+++|++++||++.
T Consensus       307 ~~~v~ydd~~Si~~K~~~~~~~~lgGv~iW~l~~DD~~g  345 (362)
T cd02872         307 NQWVGYDDEESIALKVQYLKSKGLGGAMVWSIDLDDFRG  345 (362)
T ss_pred             CEEEEeCCHHHHHHHHHHHHhCCCceEEEEeeecCcCCC
Confidence            999999999999999999999999999999999999763

The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la

>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5e-62  Score=498.96  Aligned_cols=339  Identities=26%  Similarity=0.447  Sum_probs=287.8

Q ss_pred             CCCCCeEEEEEecCCC-CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCC
Q 008332           21 AKAKPWIRVGYLNLSE-VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQG   99 (570)
Q Consensus        21 ~~~~~~~vvgY~~~~~-~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~   99 (570)
                      ...|.++.+|||..+. ...+.++++.+|||++|+|+.++.++ .+.+........+..+.+.+|.++|++|+|+|||||
T Consensus        53 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~TH~vfafa~~~~~~-~~~~~~~~~~~~f~~~~~~~k~~n~~vK~llSIGG~  131 (432)
T KOG2806|consen   53 NTVCEKSIVGYYPSRIGPETLEDQDPLKCTHLVYAFAKMKRVG-YVVFCGARTMNRFSSYNQTAKSSNPTVKVMISIGGS  131 (432)
T ss_pred             cccccceeEEEeCCCCCCCCccccChhhcCcceEEEeeecccc-cEEeccchhhhhhHHHHHHHHhhCCCceEEEEecCC
Confidence            4457889999999998 89999999999999999999999987 444554434567788888899999999999999998


Q ss_pred             CCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCC-CCCCccchhhhHHHHHHHHhhhhhcccccccceE
Q 008332          100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPN-TSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLL  178 (570)
Q Consensus       100 ~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~-~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~  178 (570)
                      . .++..|+.|++|++.|+.||+|+++|+++|+|||||||||||. .+.|+.+|..|++|||.+|.+......   ....
T Consensus       132 ~-~ns~~fs~~~s~~~~r~~FI~Sii~fl~~~~fDGvDL~We~P~~~~~d~~~~~~~i~elr~~~~~~~~~~~---~~~~  207 (432)
T KOG2806|consen  132 H-GNSGLFSLVLSDRMIRAKFIESVVSFIKDYGFDGVDLAWEWPLFTPSDQLEFSRFIQELRSAFARETLKSP---DTAK  207 (432)
T ss_pred             C-CCccchhhhhcChHHHHHHHHHHHHHHHHcCCCceeeeeECCCCchhhHHHHHHHHHHHHHHHHHHhhccC---Cccc
Confidence            5 3677899999999999999999999999999999999999997 567999999999999999986543322   2222


Q ss_pred             EEEeecccC---CCCCccChHHHhhhhceeeeecccCCCCCCCC-CCCCCCCCCCCCC-CCCccCHHHHHHHHHHcCCCC
Q 008332          179 ILTARFRYS---PPANSYLLNSIQRNLNWIHAVTASYYEPVSTN-FTAPPAALYGSIS-GRFARSTDQVLKAWIERGLSA  253 (570)
Q Consensus       179 ~~~~~~~~~---~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~-~~~~~a~l~~~~~-~~~~~~v~~~v~~~~~~gvp~  253 (570)
                      .+++++...   ....+||+++|.+++||||||+|||+|+|... .+||+|||+.... .....+++.++++|++.|.||
T Consensus       208 ~l~~~v~~~~~~~~~~~ydi~~i~~~~DfiNi~syDf~gpw~~~~~tGp~aPl~~~~~~~~~~~Nvd~~~ky~~~~~~~~  287 (432)
T KOG2806|consen  208 VLEAVVADSKQSAYSDGYDYENLSKYVDFINIMSYDYYGPWSLPCFTGPPSPLYKGPSMTNPKMNVDSLLKYWTEKGLPP  287 (432)
T ss_pred             eeeeccccCccchhhccCCHHHHHhhCCeEEEecccccCCCcCCCcCCCCcccCCCCcccccCcchhhhHHHHhhcCCCc
Confidence            344444443   34589999999999999999999999999874 8999999998654 334569999999999999999


Q ss_pred             CceeeeccccccceeccCCCCCCCCCCCC-----CC-CCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeec--CC
Q 008332          254 DKLVMCLPFYGYAWTLVKPEDNGIGAAAA-----GP-ALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFST--GT  325 (570)
Q Consensus       254 ~KlvlGip~yG~~~~~~~~~~~~~g~~~~-----g~-~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~--~~  325 (570)
                      +||+||||||||.|++++.... .+.+..     ++ .+..+|.++|.|||+...+.+   ...||+....||...  ++
T Consensus       288 ~Kl~~gip~yg~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~ls~~ei~~~~~~~~---~~~~d~~~~~~Y~~~~~~~  363 (432)
T KOG2806|consen  288 SKLVLALPFYGRSWQLLEDSRS-SAAPPFGQAAPVSMRSKGGGYMSYPEICERKINTG---VTHWDEETQTPYLYNIPYD  363 (432)
T ss_pred             hheEEEEecceehhhhcCCcCC-CCCccCCCcccCccccccCceeeHHHHHHHhcccC---CceecCCceeeeEEecCCC
Confidence            9999999999999999886554 443333     33 345789999999999655443   688999999999988  99


Q ss_pred             EEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhhHHHHh
Q 008332          326 VWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQA  368 (570)
Q Consensus       326 ~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~~~~~  368 (570)
                      +||+|||++|++.|++||+++||||+|+|++++||++.++..+
T Consensus       364 ~wvtyen~~Si~~K~~Yvk~~~lGGv~iW~vd~DD~~~~~~~~  406 (432)
T KOG2806|consen  364 QWVTYENERSIHIKADYAKDEGLGGVAIWNIDQDDESGSLLNA  406 (432)
T ss_pred             eEEecCCHHHHHHHHHHHHhcCCceEEEEeccCCCCCCccccc
Confidence            9999999999999999999999999999999999999986654

>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-60  Score=457.47  Aligned_cols=337  Identities=23%  Similarity=0.347  Sum_probs=254.3

Q ss_pred             CCCeEEEEEecCCC-----CCcCCCCCCCCcceEEEEeEEEeCCceEEe----e--------------CCCcc---HHHH
Q 008332           23 AKPWIRVGYLNLSE-----VSTISGINYDLFTHLICSSADINSTTYQLS----L--------------SLPSD---ENQI   76 (570)
Q Consensus        23 ~~~~~vvgY~~~~~-----~~~~~~i~~~~~Thii~~~~~~~~~~~~~~----~--------------~~~~~---~~~~   76 (570)
                      ..+++|||||.+|+     .|.+.+||++++|||+|+|+.|+.++..+.    .              .+++.   ...+
T Consensus        35 d~~~rvvgYY~sWs~~d~~~y~~~DIp~~qlTHInYAF~~I~~~g~~~~~~~~~~~~~~~~~~~~~~e~dp~~~~~~G~~  114 (441)
T COG3325          35 DDQFKVVGYYTSWSQYDRQDYFPGDIPLDQLTHINYAFLDINSDGKSIESWVADEAALYGVPNIEGVELDPWSDPLKGHF  114 (441)
T ss_pred             CCCceEEEEecccccCCCcccccccCCHHHhceeeEEEEEecCCCCccccccccchhhccccCcCceeeccccccccchH
Confidence            45589999999996     577899999999999999999999874211    0              01111   1224


Q ss_pred             HHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC---------CC
Q 008332           77 AKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT---------ST  147 (570)
Q Consensus        77 ~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~---------~~  147 (570)
                      .. +..+|+++|++|+++|||||..++  .|+.++.++++|++|++|+|+||++|+|||||||||||++         ++
T Consensus       115 ~~-L~~lk~~~~d~k~l~SIGGWs~S~--~F~~~aad~a~re~Fa~saVe~~r~~~FDGVDIDWEYP~~~~~~~~~~~~~  191 (441)
T COG3325         115 GA-LFDLKATYPDLKTLISIGGWSDSG--GFSDMAADDASRENFAKSAVEFMRTYGFDGVDIDWEYPGSGGDAGNCGRPK  191 (441)
T ss_pred             HH-HHHHhhhCCCceEEEeecccccCC--CcchhhcCHHHHHHHHHHHHHHHHhcCCCceeeccccCCCCCCCCCCCCcc
Confidence            34 456999999999999999998655  5999999999999999999999999999999999999963         35


Q ss_pred             CccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCC
Q 008332          148 DMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAA  226 (570)
Q Consensus       148 ~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~  226 (570)
                      +++||+.||++||++|++.+...    ++.+.|+++.+.+.. ..+.+..++.+++||||+|||||||+|. +++||+++
T Consensus       192 d~~ny~~Ll~eLR~~LD~a~~ed----gr~Y~LTiA~~as~~~l~~~~~~~~~~~vDyiNiMTYDf~G~Wn-~~~Gh~a~  266 (441)
T COG3325         192 DKANYVLLLQELRKKLDKAGVED----GRHYQLTIAAPASKDKLEGLNHAEIAQYVDYINIMTYDFHGAWN-ETLGHHAA  266 (441)
T ss_pred             cHHHHHHHHHHHHHHHhhccccc----CceEEEEEecCCchhhhhcccHHHHHHHHhhhheeeeecccccc-cccccccc
Confidence            77899999999999999765544    334445554444433 2577789999999999999999999876 57999999


Q ss_pred             CCCCCCCCCc----c------CHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCC----CCCCCC--C--CCCCC
Q 008332          227 LYGSISGRFA----R------STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNG----IGAAAA--G--PALYD  288 (570)
Q Consensus       227 l~~~~~~~~~----~------~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~----~g~~~~--g--~~~~~  288 (570)
                      ||+.+.+...    .      .....++...+.++||+|||||+|||||.|..+++...+    ......  |  .+++.
T Consensus       267 Ly~~~~d~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~klvlG~p~YgRgw~~v~~~~~~~~~~~~q~~~n~g~~~Gtw~  346 (441)
T COG3325         267 LYGTPKDPPLANGGFYVDAEVDGIDWLEEGFAGDVPPSKLVLGMPFYGRGWNGVDGGSLGTCPGLYQGLDNSGIPKGTWE  346 (441)
T ss_pred             cccCCCCCccccCCeeEEEEechhHHHHhhhccCCCCceEEeeccccccccccccCcccCCCCCcccccCCCCCCCCccc
Confidence            9976544221    1      122356666677899999999999999999988765532    111111  1  12333


Q ss_pred             CCcccHH-----HHHH-HHhhCCCCeEEeecCceEEEEee--cCCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccC
Q 008332          289 SGLVTYK-----KIKN-HIKTYGPDVQVMYNSTYEVNYFS--TGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD  360 (570)
Q Consensus       289 ~g~~~y~-----~i~~-~~~~~~~~~~~~~d~~~~~~y~~--~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd  360 (570)
                      .+...+.     .+.. ....  ..+.+.||+.+..||..  ...+||||||++|+++|++||++++|||+|+|++++|-
T Consensus       347 a~n~~~~~~~~~~l~~n~~~~--~g~~~~~d~~a~apyL~n~~~~vFiSyDd~rSvkaK~eYv~~n~LGG~m~We~sgD~  424 (441)
T COG3325         347 AGNGDKDYGKAYDLDANNAGK--NGYERYWDDVAKAPYLYNPEKGVFISYDDPRSVKAKAEYVADNNLGGMMFWEISGDE  424 (441)
T ss_pred             ccccCccchhhccccccccCC--CCeeEecccccccceeecCCCCeEEEccCCcchhhHHHHHhhcCccceEEEEecCCc
Confidence            3322222     2221 1222  34899999999999884  57899999999999999999999999999999999994


Q ss_pred             hhhHHHHhhh
Q 008332          361 HDWLLSQAAA  370 (570)
Q Consensus       361 ~~~~~~~~~~  370 (570)
                      .. .+..++.
T Consensus       425 n~-~llna~~  433 (441)
T COG3325         425 NG-VLLNAVN  433 (441)
T ss_pred             ch-hHHHHhh
Confidence            43 3444443

>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit

Probab=100.00  E-value=1.2e-59  Score=471.66  Aligned_cols=311  Identities=17%  Similarity=0.273  Sum_probs=246.9

Q ss_pred             EEEEEecCCC------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCC
Q 008332           27 IRVGYLNLSE------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGK  100 (570)
Q Consensus        27 ~vvgY~~~~~------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~  100 (570)
                      ++||||++|+      .+++++||.++||||+|+|+.+++++ .+...+  ....+.++.+ +|    ++|+++|||||.
T Consensus         1 ~~v~Y~~~w~~~r~~~~~~~~~i~~~~~THi~yaf~~~~~~g-~l~~~~--~~~~~~~~~~-~k----~lkvllsiGG~~   72 (345)
T cd02878           1 KNIAYFEAYNLDRPCLNMDVTQIDTSKYTHIHFAFANITSDF-SVDVSS--VQEQFSDFKK-LK----GVKKILSFGGWD   72 (345)
T ss_pred             CEEEEEChhhcCCCCCCCCHhHCCcccCCEEEEEeEeecCCC-eEeecc--cHHHHHHHHh-hc----CcEEEEEEeCCC
Confidence            5799999995      46799999999999999999999876 555542  3344555532 32    399999999987


Q ss_pred             CCCc----ccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC----------CCCccchhhhHHHHHHHHhhh
Q 008332          101 DTNY----SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----------STDMFNIGLLFDEWRIAATKL  166 (570)
Q Consensus       101 ~~~~----~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~----------~~~~~~~~~l~~~lr~~l~~~  166 (570)
                      .+..    ..|+.++ ++++|++||+++++++++|+|||||||||||+.          ++|+.+|+.|+++||++|+. 
T Consensus        73 ~s~~~~~~~~f~~~~-~~~~R~~Fi~si~~~~~~~~fDGidiDwE~P~~~~~~~~~~~~~~d~~n~~~ll~elr~~l~~-  150 (345)
T cd02878          73 FSTSPSTYQIFRDAV-KPANRDTFANNVVNFVNKYNLDGVDFDWEYPGAPDIPGIPAGDPDDGKNYLEFLKLLKSKLPS-  150 (345)
T ss_pred             CCCCCccchhhHhhc-CHHHHHHHHHHHHHHHHHcCCCceeecccCCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCc-
Confidence            6433    2588888 999999999999999999999999999999953          35788999999999999962 


Q ss_pred             hhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCC----CCCCccCHHH
Q 008332          167 DAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSI----SGRFARSTDQ  241 (570)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~----~~~~~~~v~~  241 (570)
                              +  +.++++++.... ...||++++.+++||||||+||+||+|... +++++|.....    ......+++.
T Consensus       151 --------~--~~ls~a~~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~g~w~~~-~~~~~p~~p~~~~~~~~~~~~~~~~  219 (345)
T cd02878         151 --------G--KSLSIAAPASYWYLKGFPIKDMAKYVDYIVYMTYDLHGQWDYG-NKWASPGCPAGNCLRSHVNKTETLD  219 (345)
T ss_pred             --------C--cEEEEEcCCChhhhcCCcHHHHHhhCcEEEEEeecccCCcCcc-CCcCCCCCCcccccccCCCchhHHH
Confidence                    2  334444444322 357999999999999999999999998743 34444422110    1111236889


Q ss_pred             HHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCCC--------CCCCCcccHHHHHHHHhhCCCCeEEeec
Q 008332          242 VLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPA--------LYDSGLVTYKKIKNHIKTYGPDVQVMYN  313 (570)
Q Consensus       242 ~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~--------~~~~g~~~y~~i~~~~~~~~~~~~~~~d  313 (570)
                      +|++|++.|+|++||+||||||||.|+++++.+++.+++..|++        +...|.+.|.++|..+... ..++..||
T Consensus       220 ~v~~~~~~Gvp~~KlvlGip~YGr~~~l~~~~~~~~~~p~~g~~~~~~~g~~~~~~g~~~~~e~~~~~~~~-~~~~~~~d  298 (345)
T cd02878         220 ALSMITKAGVPSNKVVVGVASYGRSFKMADPGCTGPGCTFTGPGSGAEAGRCTCTAGYGAISEIEIIDISK-SKNKRWYD  298 (345)
T ss_pred             HHHHHHHcCCCHHHeEEeeccccceeeccCCCCCCCCCcccCCCCCCCCCCCCCchhhhhHHHHHHHHhcc-CCCcEEEe
Confidence            99999999999999999999999999999999999888887764        2344556679998854332 13889999


Q ss_pred             CceEEEEe-ecCCEEEeccCHHHHHHHHHhhhccCCceEEEEEcccc
Q 008332          314 STYEVNYF-STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD  359 (570)
Q Consensus       314 ~~~~~~y~-~~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~D  359 (570)
                      ..+..||. ..+++||+|||++|++.|++|++++||||+|+|+|++|
T Consensus       299 ~~~~~~y~~~~~~~wv~ydd~~Si~~K~~y~~~~~LgGv~~W~ld~~  345 (345)
T cd02878         299 TDSDSDILVYDDDQWVAYMSPATKAARIEWYKGLNFGGTSDWAVDLQ  345 (345)
T ss_pred             cCCCccEEEEcCCEEEEcCCHHHHHHHHHHHHhCCCceEEEeeccCC
Confidence            99999987 44669999999999999999999999999999999987

Zymocin is a heterotrimeric enzyme that inhibits yeast cell cycle progression. The zymocin alpha subunit has a chitinase activity that is essential for holoenzyme action from the cell exterior while the gamma subunit contains the intracellular toxin responsible for G1 phase cell cycle arrest. The zymocin alpha and beta subunits are thought to act from the cell's exterior by docking to the cell wall-associated chitin, thus mediating gamma-toxin translocation. The alpha subunit has an eight-stranded TIM barrel fold similar to that of family 18 glycosyl hydrolases such as hevamine, chitolectin, and chitobiase.

>smart00636 Glyco_18 Glycosyl hydrolase family 18

Probab=100.00  E-value=2.9e-59  Score=471.74  Aligned_cols=318  Identities=31%  Similarity=0.531  Sum_probs=268.2

Q ss_pred             EEEEEecCCCC----CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccH-HHHHHHHHHHHhhCCCceEEEEEcCCCC
Q 008332           27 IRVGYLNLSEV----STISGINYDLFTHLICSSADINSTTYQLSLSLPSDE-NQIAKFADTVKKKNPSITTILSIGQGKD  101 (570)
Q Consensus        27 ~vvgY~~~~~~----~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lk~~~~~~kvllsigg~~~  101 (570)
                      +++|||++|+.    ++++++|.++||||+|+|+.+++++ ++.+.+...+ ..+.++ ..+|+++|++|++++||||..
T Consensus         1 ~~~~Y~~~w~~~~~~~~~~~~~~~~~thv~~~~~~~~~~g-~~~~~~~~~~~~~~~~~-~~l~~~~~~~kvl~svgg~~~   78 (334)
T smart00636        1 RVVGYFTNWGVYGRNFPVDDIPASKLTHIIYAFANIDPDG-TVTIGDEWADIGNFGQL-KALKKKNPGLKVLLSIGGWTE   78 (334)
T ss_pred             CEEEEECchhccCCCCChhHCCcccCcEEEEeeeeeCCCC-CEeeCCcchhhhhHHHH-HHHHHhCCCCEEEEEEeCCCC
Confidence            47999999973    7899999999999999999999976 6666543333 345555 458999999999999999865


Q ss_pred             CCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCC-CCccchhhhHHHHHHHHhhhhhcccccccceEEE
Q 008332          102 TNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS-TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLIL  180 (570)
Q Consensus       102 ~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~-~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~  180 (570)
                        +..|+.++++++.|++||+++++++++|+|||||||||+|... +++.+|+.|+++||.+|+....   .  +..+.+
T Consensus        79 --s~~f~~~~~~~~~r~~fi~~i~~~~~~~~~DGidiDwE~~~~~~~d~~~~~~ll~~lr~~l~~~~~---~--~~~~~l  151 (334)
T smart00636       79 --SDNFSSMLSDPASRKKFIDSIVSFLKKYGFDGIDIDWEYPGARGDDRENYTALLKELREALDKEGA---E--GKGYLL  151 (334)
T ss_pred             --CcchhHHHCCHHHHHHHHHHHHHHHHHcCCCeEEECCcCCCCCccHHHHHHHHHHHHHHHHHHhcc---c--CCceEE
Confidence              4679999999999999999999999999999999999999653 6788999999999999985311   1  234566


Q ss_pred             EeecccCCC--CCccC-hHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCcee
Q 008332          181 TARFRYSPP--ANSYL-LNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLV  257 (570)
Q Consensus       181 ~~~~~~~~~--~~~~~-~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~Klv  257 (570)
                      ++++++...  ...|+ +.++.+++|+|++|+||++++|+. .+||+|||+.........+++.+|++|++.|+|++||+
T Consensus       152 si~v~~~~~~~~~~~~~~~~l~~~vD~v~vm~YD~~~~~~~-~~g~~spl~~~~~~~~~~~v~~~v~~~~~~gvp~~Klv  230 (334)
T smart00636      152 TIAVPAGPDKIDKGYGDLPAIAKYLDFINLMTYDFHGAWSN-PTGHNAPLYAGPGDPEKYNVDYAVKYYLCKGVPPSKLV  230 (334)
T ss_pred             EEEecCChHHHHhhhhhHHHHHhhCcEEEEeeeccCCCCCC-CCCCCCcCCCCCCCCCCccHHHHHHHHHHcCCCHHHeE
Confidence            666555432  24578 599999999999999999998764 79999999976554345689999999999999999999


Q ss_pred             eeccccccceeccCCCCCCCCCCCCCC-----CCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeec-C-CEEEec
Q 008332          258 MCLPFYGYAWTLVKPEDNGIGAAAAGP-----ALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFST-G-TVWFGF  330 (570)
Q Consensus       258 lGip~yG~~~~~~~~~~~~~g~~~~g~-----~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~-~-~~~i~y  330 (570)
                      ||||||||.|++.++...+.+++..|+     ++..+|.++|.|||+..   +  +...||+.+..||... + ++||+|
T Consensus       231 lGip~YG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~y~ei~~~~---~--~~~~~d~~~~~~y~~~~~~~~~v~y  305 (334)
T smart00636      231 LGIPFYGRGWTLVDGSNNGPGAPFTGPATGGPGTWEGGVVDYREICKLL---G--ATVVWDDTAKAPYAYNPGTGQWVSY  305 (334)
T ss_pred             EeeccccCccccCCCCcCCCCCcccCCCCCCCCCCcccchhHHHHHhhc---C--cEEEEcCCCceeEEEECCCCEEEEc
Confidence            999999999999988777777776654     34578899999999875   3  7899999988898865 3 599999


Q ss_pred             cCHHHHHHHHHhhhccCCceEEEEEcccc
Q 008332          331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFD  359 (570)
Q Consensus       331 dd~~Si~~K~~~~~~~gLgGv~~W~l~~D  359 (570)
                      ||++|++.|++|++++||||+|+|+|++|
T Consensus       306 dd~~Si~~K~~~~~~~~lgGv~iW~l~~D  334 (334)
T smart00636      306 DDPRSIKAKADYVKDKGLGGVMIWELDAD  334 (334)
T ss_pred             CCHHHHHHHHHHHHhCCCCeEEEEeecCC
Confidence            99999999999999999999999999997

>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites

Probab=100.00  E-value=3.5e-59  Score=465.68  Aligned_cols=286  Identities=27%  Similarity=0.434  Sum_probs=240.6

Q ss_pred             EEEEecCCCCC----cCC-CCCCCCcceEEEEeEEEeCCceEEeeCC------------------CccHHHHHHHHHHHH
Q 008332           28 RVGYLNLSEVS----TIS-GINYDLFTHLICSSADINSTTYQLSLSL------------------PSDENQIAKFADTVK   84 (570)
Q Consensus        28 vvgY~~~~~~~----~~~-~i~~~~~Thii~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~lk   84 (570)
                      |+|||++|+.+    .+. +||+++||||+|+|+.+++++..+...+                  ......+.++. .+|
T Consensus         1 v~~Y~~~W~~~~~~~~~~~~i~~~~~THl~yaf~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lk   79 (322)
T cd06548           1 VVGYFTNWGIYGRNYFVTDDIPADKLTHINYAFADIDGDGGVVTSDDEAADEAAQSVDGGADTDDQPLKGNFGQLR-KLK   79 (322)
T ss_pred             CEEEeCCCcccCCCCCcccCCChhHCcEEEEEeeeEcCCCCeEccChhhhhhccccCCcccccCCccchhHHHHHH-HHH
Confidence            58999999744    334 5999999999999999999875554321                  11234566665 599


Q ss_pred             hhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC---------CCCccchhhh
Q 008332           85 KKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT---------STDMFNIGLL  155 (570)
Q Consensus        85 ~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~---------~~~~~~~~~l  155 (570)
                      +++|++|+++|||||..  +..|+.++++++.|++||+++++++++|+|||||||||||+.         ++++.+|+.|
T Consensus        80 ~~~p~lkvl~siGG~~~--s~~f~~~~~~~~~r~~Fi~siv~~l~~~~fDGidiDwE~p~~~~~~~~~~~~~d~~~~~~l  157 (322)
T cd06548          80 QKNPHLKILLSIGGWTW--SGGFSDAAATEASRAKFADSAVDFIRKYGFDGIDIDWEYPGSGGAPGNVARPEDKENFTLL  157 (322)
T ss_pred             HhCCCCEEEEEEeCCCC--CCCchhHhCCHHHHHHHHHHHHHHHHhcCCCeEEECCcCCCCCCCCCCCCChhHHHHHHHH
Confidence            99999999999999874  467999999999999999999999999999999999999964         4688999999


Q ss_pred             HHHHHHHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCC-
Q 008332          156 FDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISG-  233 (570)
Q Consensus       156 ~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~-  233 (570)
                      +++||++|+....+.    ...+.++++++.... ...++++++.+++|+||+|+|||+|+|+ ..+|++|||++.... 
T Consensus       158 l~~Lr~~l~~~~~~~----~~~~~Ls~av~~~~~~~~~~~~~~l~~~vD~vnlMtYD~~g~w~-~~~g~~spL~~~~~~~  232 (322)
T cd06548         158 LKELREALDALGAET----GRKYLLTIAAPAGPDKLDKLEVAEIAKYLDFINLMTYDFHGAWS-NTTGHHSNLYASPADP  232 (322)
T ss_pred             HHHHHHHHHHhhhcc----CCceEEEEEccCCHHHHhcCCHHHHhhcCCEEEEEEeeccCCCC-CCCCCCCCCCCCCCCC
Confidence            999999998543221    234566666555432 3567899999999999999999999987 579999999976542 


Q ss_pred             CCccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeec
Q 008332          234 RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYN  313 (570)
Q Consensus       234 ~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d  313 (570)
                      ....+++.++++|++.|+|++||+||||||||.|++                                      +...||
T Consensus       233 ~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~~~~--------------------------------------~~~~~D  274 (322)
T cd06548         233 PGGYSVDAAVNYYLSAGVPPEKLVLGVPFYGRGWTG--------------------------------------YTRYWD  274 (322)
T ss_pred             CCCccHHHHHHHHHHcCCCHHHeEEEecccccccCC--------------------------------------cEEEEc
Confidence            235689999999999999999999999999999953                                      457899


Q ss_pred             CceEEEEeecC--CEEEeccCHHHHHHHHHhhhccCCceEEEEEcccc
Q 008332          314 STYEVNYFSTG--TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD  359 (570)
Q Consensus       314 ~~~~~~y~~~~--~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~D  359 (570)
                      +.+..||...+  ++||+|||++|++.|++||+++||||+|+|++++|
T Consensus       275 ~~~~~~y~~~~~~~~~v~ydd~~Si~~K~~~a~~~~LgGv~~W~l~~D  322 (322)
T cd06548         275 EVAKAPYLYNPSTKTFISYDDPRSIKAKADYVKDKGLGGVMFWELSGD  322 (322)
T ss_pred             CCcceeEEEeCCCCeEEEeCCHHHHHHHHHHHHhcCCccEEEEeccCC
Confidence            99999998766  89999999999999999999999999999999998

The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.

>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3

Probab=100.00  E-value=2.5e-53  Score=431.78  Aligned_cols=324  Identities=28%  Similarity=0.476  Sum_probs=263.2

Q ss_pred             eEEEEEecCCCC-----CcCCCCCCCCcceEEEEeEEEeCCceEEe-----eCCCccHHHHHHHHHHHHhhCCCceEEEE
Q 008332           26 WIRVGYLNLSEV-----STISGINYDLFTHLICSSADINSTTYQLS-----LSLPSDENQIAKFADTVKKKNPSITTILS   95 (570)
Q Consensus        26 ~~vvgY~~~~~~-----~~~~~i~~~~~Thii~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~lk~~~~~~kvlls   95 (570)
                      ++|||||.+|+.     +.++++|++.||||+|+|+.++.++....     .........+.. ++.+|+++|++|++++
T Consensus         1 ~~vv~Y~~~~~~~~~~~~~~~~i~~~~~t~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~kvlls   79 (343)
T PF00704_consen    1 KRVVGYYSNWNSYRPGSYKIEDIPWSKCTHIVYAFAGIDPNGNLNYPWNFDDDNDGDSSGFKN-LKELKAKNPGVKVLLS   79 (343)
T ss_dssp             BEEEEEEEGGGGSSTGCSHGGGSHTTTESEEEEEEEEEETTTTEEEGTTTECSSTTHHHHHHH-HHHHHHHHTT-EEEEE
T ss_pred             CEEEEEECCcCCCCCCCCCHHHCCcccCCEEEEEeeeecCCCceecccccccccCccccchhH-HHHHHhhccCceEEEE
Confidence            589999999953     66889999999999999999999874432     232333444444 4568899999999999


Q ss_pred             EcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCC---CCccchhhhHHHHHHHHhhhhhcccc
Q 008332           96 IGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS---TDMFNIGLLFDEWRIAATKLDAKNST  172 (570)
Q Consensus        96 igg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~---~~~~~~~~l~~~lr~~l~~~~~~~~~  172 (570)
                      |||+..+ ...|..++++++.|++||++++++|++|+|||||||||+|...   +++.+|..|+++||.+|++.....  
T Consensus        80 igg~~~~-~~~~~~~~~~~~~r~~f~~~i~~~l~~y~~DGidiD~e~~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~~--  156 (343)
T PF00704_consen   80 IGGWGMS-SDGFSQLLSNPAKRQNFINNIVSFLKKYGFDGIDIDWEYPSSSGDPQDKDNYTAFLKELRKALKRANRSG--  156 (343)
T ss_dssp             EEETTSS-HHHHHHHHHSHHHHHHHHHHHHHHHHHHT-SEEEEEESSTTSTSSTTHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             ecccccc-ccccccccccHHHHHHHHHhhhhhhcccCcceeeeeeeeccccccchhhhhhhhhhhhhhhhhccccccc--
Confidence            9997642 2479999999999999999999999999999999999999553   588999999999999998542221  


Q ss_pred             cccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCC
Q 008332          173 RQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGL  251 (570)
Q Consensus       173 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gv  251 (570)
                         ..+.++++++..+. ...++++.+.+++|||++|+||++++|.. .++|++|+++........+++.++++|+..|+
T Consensus       157 ---~~~~ls~a~p~~~~~~~~~~~~~l~~~vD~v~~m~yD~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~g~  232 (343)
T PF00704_consen  157 ---KGYILSVAVPPSPDYYDKYDYKELAQYVDYVNLMTYDYHGPWSD-VTGPNAPLYDSSWDSNYYSVDSAVQYWIKAGV  232 (343)
T ss_dssp             ---STSEEEEEEECSHHHHTTHHHHHHHTTSSEEEEETTSSSSTTSS-BETTSSSSSHTTTSGTSSSHHHHHHHHHHTTS
T ss_pred             ---ceeEEeeccccccccccccccccccccccccccccccCCCCccc-ccccccccccCCccCCCceeeeehhhhccccC
Confidence               13444554443322 24458999999999999999999998776 89999999976543335689999999999999


Q ss_pred             CCCceeeeccccccceeccCCCCCCCCCCC---CCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecC--CE
Q 008332          252 SADKLVMCLPFYGYAWTLVKPEDNGIGAAA---AGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTG--TV  326 (570)
Q Consensus       252 p~~KlvlGip~yG~~~~~~~~~~~~~g~~~---~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~--~~  326 (570)
                      |++||+||+|+||+.|++.++..+...++.   .+..+..++.++|.++|......+  +...||+.+..+|....  +.
T Consensus       233 p~~Kl~lglp~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~y~~~~~~~~  310 (343)
T PF00704_consen  233 PPSKLVLGLPFYGRSWTLVNGSPNGPWGPAYWSPGKGTKNAGILSYYELCALLKSNG--YTVQWDDTAQAPYAYNDDKKH  310 (343)
T ss_dssp             TGGGEEEEEESEEEEEESSSSTTSTTTBBEESEETTTTSBTTEEEHHHHHHHTHHTT--EEEEEETTTTEEEEEETTTTE
T ss_pred             ChhheeecCCcccccceecCCcCCCCCCcccccccccccCCCccccccchhhcccCC--cceEEeecccceEEEecCCCe
Confidence            999999999999999999887766655432   456678889999999999887665  88899998999998776  79


Q ss_pred             EEeccCHHHHHHHHHhhhccCCceEEEEEcccc
Q 008332          327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD  359 (570)
Q Consensus       327 ~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~D  359 (570)
                      ||+|||++|++.|++|++++||||+++|+|++|
T Consensus       311 ~i~~e~~~Si~~K~~~v~~~glgGv~~W~l~~D  343 (343)
T PF00704_consen  311 WISYEDPRSIKAKMDYVKEKGLGGVAIWSLDQD  343 (343)
T ss_dssp             EEEE--HHHHHHHHHHHHHTT-SEEEEETGGGS
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCCEEEEEecCCC
Confidence            999999999999999999999999999999998

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Some members of this family, GH18 from CAZY, belong to the chitinase class II group which includes chitinase, chitodextrinase and the killer toxin of Kluyveromyces lactis. The chitinases hydrolyse chitin oligosaccharides. The family also includes various glycoproteins from mammals; cartilage glycoprotein and the oviduct-specific glycoproteins are two examples.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1ITX_A 3ALG_A 3ALF_A 1NAR_A 3QOK_A 3G6L_A 3G6M_A 2DT1_A 2B31_A 2O92_A ....

>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome

Probab=100.00  E-value=9.2e-53  Score=419.12  Aligned_cols=292  Identities=15%  Similarity=0.183  Sum_probs=233.0

Q ss_pred             EEEEEecCCC--CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEE--EEEcCCCCC
Q 008332           27 IRVGYLNLSE--VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTI--LSIGQGKDT  102 (570)
Q Consensus        27 ~vvgY~~~~~--~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvl--lsigg~~~~  102 (570)
                      .++|||++|+  .+.+.+++.++||||+|+|+.+++++..+...+..+..  ..++..+|+++|++||+  +++|||.. 
T Consensus         4 ~~~~y~~~W~~~~~~~~~~~~~~lthv~~~f~~i~~~g~~~~~~~~~~~~--~~~~~~lk~~~~~lkvlp~i~~gg~~~-   80 (318)
T cd02876           4 PVLGYVTPWNSHGYDVAKKFAAKFTHVSPVWLQIKRKGNKFVIEGTHDID--KGWIEEVRKANKNIKILPRVLFEGWSY-   80 (318)
T ss_pred             ceEEEEcCcCccchHHHHHHhccCCEecceEEEEecCCCeeeeecCcchh--hHHHHHHHhhCCCcEEEeEEEECCCCH-
Confidence            4789999997  56788899999999999999999877555444322211  23455689999999999  66788753 


Q ss_pred             CcccccccccChHHHHHHHHHHHHHHHHcCCCceeee-ccCCCC---CCCccchhhhHHHHHHHHhhhhhcccccccceE
Q 008332          103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFA-WTAPNT---STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLL  178 (570)
Q Consensus       103 ~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiD-wE~p~~---~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~  178 (570)
                        ..|+.+++++++|++||+++++++++||||||||| ||+|..   ++++.+|+.|+++||++|++.        +..+
T Consensus        81 --~~f~~~~~~~~~R~~fi~s~~~~~~~~~~DGidiD~we~p~~~~~~~d~~~~~~~l~el~~~l~~~--------~~~l  150 (318)
T cd02876          81 --QDLQSLLNDEQEREKLIKLLVTTAKKNHFDGIVLEVWSQLAAYGVPDKRKELIQLVIHLGETLHSA--------NLKL  150 (318)
T ss_pred             --HHHHHHHcCHHHHHHHHHHHHHHHHHcCCCcEEEechhhhcccCCHHHHHHHHHHHHHHHHHHhhc--------CCEE
Confidence              35999999999999999999999999999999999 999954   358899999999999999842        3445


Q ss_pred             EEEeecccCC-----CCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcC-CC
Q 008332          179 ILTARFRYSP-----PANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERG-LS  252 (570)
Q Consensus       179 ~~~~~~~~~~-----~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~g-vp  252 (570)
                      +++++.....     ....||++++.+++|+++||+||+|++   +.+||+||++         +++.+++++++.| +|
T Consensus       151 ~~~v~~~~~~~~~~~~~~~~d~~~l~~~vD~v~lMtYD~~~~---~~~g~~apl~---------~v~~~v~~~~~~~~vp  218 (318)
T cd02876         151 ILVIPPPREKGNQNGLFTRKDFEKLAPHVDGFSLMTYDYSSP---QRPGPNAPLS---------WVRSCLELLLPESGKK  218 (318)
T ss_pred             EEEEcCccccccccccccccCHHHHHhhccEEEEEeeccCCC---CCCCCCCCcH---------HHHHHHHHHHhcCCCC
Confidence            5555443322     234689999999999999999999986   5699999997         8999999999987 99


Q ss_pred             CCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEE-eecC---CEEE
Q 008332          253 ADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY-FSTG---TVWF  328 (570)
Q Consensus       253 ~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y-~~~~---~~~i  328 (570)
                      ++||+||||||||.|++.+     .+.+           +++.+..+.+...+  ++..||+.+..++ ...+   ++||
T Consensus       219 ~~KlvlGip~YG~~w~~~~-----~~~~-----------~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~y~~~~~~~~v  280 (318)
T cd02876         219 RAKILLGLNFYGNDYTLPG-----GGGA-----------ITGSEYLKLLKSNK--PKLQWDEKSAEHFFEYKNKGGKHAV  280 (318)
T ss_pred             HHHeEEeccccccccccCC-----CCce-----------eehHHHHHHHHhcC--CCceeccCCCcceEEEecCCCcEEE
Confidence            9999999999999997643     1111           22333334444444  6778998866654 4333   7899


Q ss_pred             eccCHHHHHHHHHhhhccCCceEEEEEccccChh
Q 008332          329 GFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD  362 (570)
Q Consensus       329 ~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~  362 (570)
                      +|||++|++.|++||+++|| |+|+|+|++++..
T Consensus       281 ~ydd~~Si~~K~~~a~~~~l-Gv~~W~lg~~~~~  313 (318)
T cd02876         281 FYPTLKSIQLRLDLAKELGT-GISIWELGQGLDY  313 (318)
T ss_pred             EeCCHHHHHHHHHHHHHcCC-cEEEEcccCCchH
Confidence            99999999999999999999 9999999998755

SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.

>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes

Probab=100.00  E-value=7.1e-50  Score=400.98  Aligned_cols=292  Identities=16%  Similarity=0.223  Sum_probs=224.5

Q ss_pred             CCeEEEEEecCCCCCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCC
Q 008332           24 KPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTN  103 (570)
Q Consensus        24 ~~~~vvgY~~~~~~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~  103 (570)
                      ..+.|+||....  ..-...+++.+|||..+       +       ..+    ++++..+  |.+++||+++.+ ..   
T Consensus        34 ~~~~~~~~~~~~--~~~~~~~~~~~tti~~~-------~-------~~~----~~~~~~A--~~~~v~v~~~~~-~~---   87 (358)
T cd02875          34 PRFEFLVFSVNS--TNYPNYDWSKVTTIAIF-------G-------DID----DELLCYA--HSKGVRLVLKGD-VP---   87 (358)
T ss_pred             CceEEEEEEeCC--CcCcccccccceEEEec-------C-------CCC----HHHHHHH--HHcCCEEEEECc-cC---
Confidence            347799999763  45578899999999865       1       112    2344334  444799998732 11   


Q ss_pred             cccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC--CCCccchhhhHHHHHHHHhhhhhcccccccceEEEE
Q 008332          104 YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT--STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILT  181 (570)
Q Consensus       104 ~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~--~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~  181 (570)
                          ...++++++|++||+++++++++|||||||||||+|..  ++++++|+.|+++||++|++.        ...+.++
T Consensus        88 ----~~~l~~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p~~~~~~d~~~~t~llkelr~~l~~~--------~~~~~Ls  155 (358)
T cd02875          88 ----LEQISNPTYRTQWIQQKVELAKSQFMDGINIDIEQPITKGSPEYYALTELVKETTKAFKKE--------NPGYQIS  155 (358)
T ss_pred             ----HHHcCCHHHHHHHHHHHHHHHHHhCCCeEEEcccCCCCCCcchHHHHHHHHHHHHHHHhhc--------CCCcEEE
Confidence                23578999999999999999999999999999999964  467899999999999999842        1233444


Q ss_pred             eecccCC--CC-CccChHHHhhhhceeeeecccCCCC-CC-CCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCce
Q 008332          182 ARFRYSP--PA-NSYLLNSIQRNLNWIHAVTASYYEP-VS-TNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKL  256 (570)
Q Consensus       182 ~~~~~~~--~~-~~~~~~~l~~~vD~i~vm~yd~~~~-~~-~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~Kl  256 (570)
                      ++++..+  .. ..||+++|++++||++|||||+|++ |. ...+||+||+.         +++.++++|++.|+|++||
T Consensus       156 vav~~~p~~~~~~~yd~~~l~~~vD~v~lMtYD~h~~~w~~~~~~g~~ap~~---------~v~~~v~~~~~~gvp~~KL  226 (358)
T cd02875         156 FDVAWSPSCIDKRCYDYTGIADASDFLVVMDYDEQSQIWGKECIAGANSPYS---------QTLSGYNNFTKLGIDPKKL  226 (358)
T ss_pred             EEEecCcccccccccCHHHHHhhCCEeeEEeecccCCCCCCCCCCCCCCCch---------hHHHHHHHHHHcCCCHHHe
Confidence            4443322  22 3499999999999999999999986 44 23588899875         8999999999999999999


Q ss_pred             eeeccccccceeccCCCCCC-----CCCCCCCCC-CC-CCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeec----CC
Q 008332          257 VMCLPFYGYAWTLVKPEDNG-----IGAAAAGPA-LY-DSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFST----GT  325 (570)
Q Consensus       257 vlGip~yG~~~~~~~~~~~~-----~g~~~~g~~-~~-~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~----~~  325 (570)
                      +||||+|||.|++.++....     .+.+..|.. +. ..+.++|.+|+..++..+  +...||+.+..||+.+    +.
T Consensus       227 vLGip~YGr~w~~~~~~~~~~~~~~~~~p~~g~~~~~~~g~~i~Y~ei~~~~~~~~--~~~~wD~~~~~py~~y~d~~g~  304 (358)
T cd02875         227 VMGLPWYGYDYPCLNGNLEDVVCTIPKVPFRGANCSDAAGRQIPYSEIMKQINSSI--GGRLWDSEQKSPFYNYKDKQGN  304 (358)
T ss_pred             EEEeCCCCCceeCCCCcccCcccCCCCCCcCCCCCcCCCCCccCHHHHHHHHhcCC--CceeeccccccceEEEecCCCc
Confidence            99999999999876554111     122222221 12 335689999999877655  6788999999998743    22


Q ss_pred             -EEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhhH
Q 008332          326 -VWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL  364 (570)
Q Consensus       326 -~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~  364 (570)
                       +||+|||++|++.|++||+++||||+|+|++|+||++..
T Consensus       305 ~~~V~ydD~~Si~~K~~~a~~~gL~Gv~iW~ld~dD~~g~  344 (358)
T cd02875         305 LHQVWYDNPQSLSIKVAYAKNLGLKGIGMWNGDLLDYSGL  344 (358)
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCCeEEEEeccccccCCC
Confidence             699999999999999999999999999999999998864

Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.

>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination

Probab=100.00  E-value=3e-49  Score=394.03  Aligned_cols=294  Identities=19%  Similarity=0.307  Sum_probs=235.3

Q ss_pred             EEEEEecCCCCC--cCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCC--C
Q 008332           27 IRVGYLNLSEVS--TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKD--T  102 (570)
Q Consensus        27 ~vvgY~~~~~~~--~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~--~  102 (570)
                      .++|||.+|+..  ....-..+++|||++.++.++++| .+...  .+    .++++.+|++  ++|++++|||+..  .
T Consensus         3 ~~~g~~~~~~~~~~~~~~~~~~~lt~v~p~w~~~~~~g-~~~~~--~~----~~~~~~a~~~--~~kv~~~i~~~~~~~~   73 (313)
T cd02874           3 EVLGYYTPRNGSDYESLRANAPYLTYIAPFWYGVDADG-TLTGL--PD----ERLIEAAKRR--GVKPLLVITNLTNGNF   73 (313)
T ss_pred             eEEEEEecCCCchHHHHHHhcCCCCEEEEEEEEEcCCC-CCCCC--CC----HHHHHHHHHC--CCeEEEEEecCCCCCC
Confidence            489999998754  444456788999999999999987 33322  11    3555556555  7999999998752  3


Q ss_pred             CcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEe
Q 008332          103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTA  182 (570)
Q Consensus       103 ~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~  182 (570)
                      ++..|+.++++++.|++||+++++++++|||||||||||+| ..+++.+|+.|+++||.+|++.        +..+++++
T Consensus        74 ~~~~~~~~l~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~~-~~~d~~~~~~fl~~lr~~l~~~--------~~~lsv~~  144 (313)
T cd02874          74 DSELAHAVLSNPEARQRLINNILALAKKYGYDGVNIDFENV-PPEDREAYTQFLRELSDRLHPA--------GYTLSTAV  144 (313)
T ss_pred             CHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCcEEEecccC-CHHHHHHHHHHHHHHHHHhhhc--------CcEEEEEe
Confidence            55678999999999999999999999999999999999998 4678999999999999999731        23333333


Q ss_pred             ecccC-----CCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCcee
Q 008332          183 RFRYS-----PPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLV  257 (570)
Q Consensus       183 ~~~~~-----~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~Klv  257 (570)
                      .+...     .....|+++++.+++|++++|+||++++|+  .+||+||+.         +++..++++. .|+|++||+
T Consensus       145 ~p~~~~~~~~~~~~~~~~~~l~~~vD~v~lm~YD~~~~~~--~~gp~a~~~---------~~~~~~~~~~-~gvp~~Klv  212 (313)
T cd02874         145 VPKTSADQFGNWSGAYDYAAIGKIVDFVVLMTYDWHWRGG--PPGPVAPIG---------WVERVLQYAV-TQIPREKIL  212 (313)
T ss_pred             cCccccccccccccccCHHHHHhhCCEEEEEEeccCCCCC--CCCccCChH---------HHHHHHHHHH-hcCCHHHEE
Confidence            32211     123578999999999999999999998753  589999975         7888887766 789999999


Q ss_pred             eeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeec-----CCEEEeccC
Q 008332          258 MCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFST-----GTVWFGFDD  332 (570)
Q Consensus       258 lGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~-----~~~~i~ydd  332 (570)
                      ||||+|||.|++.++.            ....+.++|.++++.+...+  ....||+.+..||..+     ..+||+|||
T Consensus       213 lGip~YG~~w~~~~~~------------~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~y~~~~g~~~~v~y~d  278 (313)
T cd02874         213 LGIPLYGYDWTLPYKK------------GGKASTISPQQAINLAKRYG--AEIQYDEEAQSPFFRYVDEQGRRHEVWFED  278 (313)
T ss_pred             EeecccccccccCCCC------------CcCccccCHHHHHHHHHHcC--CCeEECcccCCCcEEEEeCCCCEEEEEeCc
Confidence            9999999999865411            01235588999998888776  7889999998887632     357999999


Q ss_pred             HHHHHHHHHhhhccCCceEEEEEccccChh-hH
Q 008332          333 VEAVRAKIAYAKEKRLLGYYAWQVSFDDHD-WL  364 (570)
Q Consensus       333 ~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~-~~  364 (570)
                      ++|++.|++|++++||||+++|+|++||.+ |.
T Consensus       279 ~~Si~~K~~~~~~~~lgGv~iW~lg~dD~~~w~  311 (313)
T cd02874         279 ARSLQAKFELAKEYGLRGVSYWRLGLEDPQNWL  311 (313)
T ss_pred             HHHHHHHHHHHHHcCCCeEEEEECCCCCccccc
Confidence            999999999999999999999999999964 43

CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.

>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas

Probab=100.00  E-value=1.1e-46  Score=362.77  Aligned_cols=242  Identities=22%  Similarity=0.377  Sum_probs=201.0

Q ss_pred             EEEEecCCCCCc--CCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcc
Q 008332           28 RVGYLNLSEVST--ISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYS  105 (570)
Q Consensus        28 vvgY~~~~~~~~--~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~  105 (570)
                      |||||++|+...  +.++|..+||||+|+|+.++++| ++...+.  ...+..+++.+|+  +++|++++||||..   .
T Consensus         1 vigyy~~w~~~~~~~~~~~~~~lThv~~~f~~i~~~G-~l~~~~~--~~~~~~~~~~~~~--~~~kvl~sigg~~~---~   72 (253)
T cd06545           1 VVGYLPNYDDLNALSPTIDFSKLTHINLAFANPDANG-TLNANPV--RSELNSVVNAAHA--HNVKILISLAGGSP---P   72 (253)
T ss_pred             CEEEeCCcccccCCcccCChhhCCeEEEEEEEECCCC-eEEecCc--HHHHHHHHHHHHh--CCCEEEEEEcCCCC---C
Confidence            689999998654  89999999999999999999987 5555432  2345566655544  57999999998754   2


Q ss_pred             cccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecc
Q 008332          106 IYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFR  185 (570)
Q Consensus       106 ~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~  185 (570)
                      .|..+++++++|++||+++++++++|+|||||||||+|...  +.+|..|+++||+++++          ..+.++++++
T Consensus        73 ~~~~~~~~~~~r~~fi~~lv~~~~~~~~DGIdiDwE~~~~~--~~~~~~fv~~Lr~~l~~----------~~~~lt~av~  140 (253)
T cd06545          73 EFTAALNDPAKRKALVDKIINYVVSYNLDGIDVDLEGPDVT--FGDYLVFIRALYAALKK----------EGKLLTAAVS  140 (253)
T ss_pred             cchhhhcCHHHHHHHHHHHHHHHHHhCCCceeEEeeccCcc--HhHHHHHHHHHHHHHhh----------cCcEEEEEcc
Confidence            37779999999999999999999999999999999999543  78999999999999973          2234455544


Q ss_pred             cCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCC-CCCceeeeccccc
Q 008332          186 YSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGL-SADKLVMCLPFYG  264 (570)
Q Consensus       186 ~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gv-p~~KlvlGip~yG  264 (570)
                      ....  .+...++.+++|+|+||+||++|+|....++|++|+.         +++.++++|++.|+ |++||+||||+||
T Consensus       141 ~~~~--~~~~~~~~~~vD~i~vMtYD~~g~~~~~~~g~~a~~~---------~~~~~v~~~~~~g~ip~~KlvlGlp~YG  209 (253)
T cd06545         141 SWNG--GAVSDSTLAYFDFINIMSYDATGPWWGDNPGQHSSYD---------DAVNDLNYWNERGLASKDKLVLGLPFYG  209 (253)
T ss_pred             Cccc--ccccHHHHhhCCEEEEEcCcCCCCCCCCCCCCCCchH---------hHHHHHHHHHHcCCCCHHHEEEEeCCcc
Confidence            3221  2234668899999999999999998776789999875         78999999999998 9999999999999


Q ss_pred             cceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHHHHHhhh
Q 008332          265 YAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAK  344 (570)
Q Consensus       265 ~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~K~~~~~  344 (570)
                      |.|                                                             +|+.+.+++.|+++++
T Consensus       210 ~~w-------------------------------------------------------------~~~~~~~~~~~~~~~~  228 (253)
T cd06545         210 YGF-------------------------------------------------------------YYNGIPTIRNKVAFAK  228 (253)
T ss_pred             ccc-------------------------------------------------------------cCCCHHHHHHHHHHHH
Confidence            988                                                             2788889999999999


Q ss_pred             ccCCceEEEEEccccChh
Q 008332          345 EKRLLGYYAWQVSFDDHD  362 (570)
Q Consensus       345 ~~gLgGv~~W~l~~Dd~~  362 (570)
                      ++ +||+|+|++++|..+
T Consensus       229 ~~-~gG~~~w~~~~d~~~  245 (253)
T cd06545         229 QN-YGGVMIWELSQDASG  245 (253)
T ss_pred             Hh-cCeEEEEeccCCCCC
Confidence            99 999999999999743

>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain

Probab=100.00  E-value=4e-44  Score=352.31  Aligned_cols=288  Identities=13%  Similarity=0.105  Sum_probs=216.3

Q ss_pred             EEEEecCCCCCcCC--CCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcc
Q 008332           28 RVGYLNLSEVSTIS--GINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYS  105 (570)
Q Consensus        28 vvgY~~~~~~~~~~--~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~  105 (570)
                      ++|||.+|+....+  ......+|||+..+..++..++.+...  .+.. ....+..+|+++|.++++.+++|+.. ++.
T Consensus         2 ~l~~~~~w~~~s~~sl~~~~~~l~~vsP~W~~~~~~~g~l~~~--~d~~-~~~~~~~~k~~~~~l~~~~~~~~~~~-~~~   77 (298)
T cd06549           2 ALAFYTPWDDASFASLKRHAPRLDWLVPEWLNLTGPEGRIDVF--VDPQ-GVAIIAAAKAHPKVLPLVQNISGGAW-DGK   77 (298)
T ss_pred             eeEEEecCChhhHHHHHHhhccCCEEeceeEEEecCCCceecc--CChH-HHHHHHHHHcCCceeEEEEecCCCCC-CHH
Confidence            68999999643322  233457999999999998433355432  2222 23344567888888999999987654 456


Q ss_pred             cccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecc
Q 008332          106 IYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFR  185 (570)
Q Consensus       106 ~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~  185 (570)
                      .|+.++++++.|++||+++++++++|+|||||||||++ .++++.+|+.|+++||++|++          ..+.++++++
T Consensus        78 ~~~~~l~~~~~R~~fi~~iv~~~~~~~~dGidiD~E~~-~~~d~~~~~~fl~eL~~~l~~----------~~~~lsv~v~  146 (298)
T cd06549          78 NIARLLADPSARAKFIANIAAYLERNQADGIVLDFEEL-PADDLPKYVAFLSELRRRLPA----------QGKQLTVTVP  146 (298)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHhCCCCEEEecCCC-ChhHHHHHHHHHHHHHHHhhh----------cCcEEEEEec
Confidence            69999999999999999999999999999999999998 567899999999999999983          2234444444


Q ss_pred             cCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCceeeecccccc
Q 008332          186 YSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGY  265 (570)
Q Consensus       186 ~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~  265 (570)
                      ...  ..||++++.+++|+++||+||+|++++  .+||.++..         +++..+++. ..|+|++||+||||+|||
T Consensus       147 ~~~--~~~d~~~l~~~~D~v~lMtYD~~~~~~--~~gp~a~~~---------~~~~~~~~~-~~~vp~~KlvlGip~YG~  212 (298)
T cd06549         147 ADE--ADWNLKALARNADKLILMAYDEHYQGG--APGPIASQD---------WFESNLAQA-VKKLPPEKLIVALGSYGY  212 (298)
T ss_pred             CCC--CCCCHHHHHHhCCEEEEEEeccCCCCC--CCCCCCChh---------hHHHHHHHH-HhCCCHHHEEEEecccCc
Confidence            332  458999999999999999999997643  467776643         677777665 468999999999999999


Q ss_pred             ceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEE-eec----CCEEEeccCHHHHHHHH
Q 008332          266 AWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY-FST----GTVWFGFDDVEAVRAKI  340 (570)
Q Consensus       266 ~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y-~~~----~~~~i~ydd~~Si~~K~  340 (570)
                      .|++..+     +           ..++..+....+...+  ....|++....|+ ...    ..++|+|||++|++.|+
T Consensus       213 ~w~~~~~-----~-----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~h~Vw~~d~~Sl~~K~  274 (298)
T cd06549         213 DWTKGGN-----T-----------KAISSEAAWLLAAHAS--AAVKFDDKASNATYFFYDDEGVSHEVWMLDAVTLFNQL  274 (298)
T ss_pred             cccCCCC-----C-----------cccCHHHHHHHHHHcC--CcceecccccCCceEEEcCCCcEEEEEeccHHHHHHHH
Confidence            9976321     1           1133445444444444  4556766555553 321    23678899999999999


Q ss_pred             HhhhccCCceEEEEEccccChh
Q 008332          341 AYAKEKRLLGYYAWQVSFDDHD  362 (570)
Q Consensus       341 ~~~~~~gLgGv~~W~l~~Dd~~  362 (570)
                      ++|+++||||+++|+|++||.+
T Consensus       275 ~~a~~~~l~Gva~W~lg~ed~~  296 (298)
T cd06549         275 KAVQRLGPAGVALWRLGSEDPG  296 (298)
T ss_pred             HHHHHcCCCcEEEEeccCCCCC
Confidence            9999999999999999999854

>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods

Probab=100.00  E-value=4.7e-36  Score=282.67  Aligned_cols=170  Identities=23%  Similarity=0.352  Sum_probs=134.5

Q ss_pred             EEEEecCCCCCc---CCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCc
Q 008332           28 RVGYLNLSEVST---ISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY  104 (570)
Q Consensus        28 vvgY~~~~~~~~---~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~  104 (570)
                      ++|||.+|+...   +..++.++||||+++|+.+++++..........+ .....++.+++++|++|+++||||+.... 
T Consensus         1 vv~y~~~w~~~~~~~~~~~~~~~~thvi~~f~~v~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~g~kv~~sigg~~~~~-   78 (210)
T cd00598           1 VICYYDGWSSGRGPDPTDIPLSLCTHIIYAFAEISSDGSLNLFGDKSEE-PLKGALEELASKKPGLKVLISIGGWTDSS-   78 (210)
T ss_pred             CEEEEccccccCCCChhhCCcccCCEEEEeeEEECCCCCEecccCcccH-HHHHHHHHHHHhCCCCEEEEEEcCCCCCC-
Confidence            589999997554   4789999999999999999988744331222222 33344556888889999999999976532 


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCC--CccchhhhHHHHHHHHhhhhhcccccccceEEEEe
Q 008332          105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTST--DMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTA  182 (570)
Q Consensus       105 ~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~--~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~  182 (570)
                       .+ .++++++.|++|++++++++++|+|||||||||+|....  ++.+|+.|+++||++++.          ..+.+++
T Consensus        79 -~~-~~~~~~~~~~~f~~~~~~~v~~~~~DGidiD~E~~~~~~~~~~~~~~~ll~~lr~~l~~----------~~~~ls~  146 (210)
T cd00598          79 -PF-TLASDPASRAAFANSLVSFLKTYGFDGVDIDWEYPGAADNSDRENFITLLRELRSALGA----------ANYLLTI  146 (210)
T ss_pred             -Cc-hhhcCHHHHHHHHHHHHHHHHHcCCCceEEeeeCCCCcCccHHHHHHHHHHHHHHHhcc----------cCcEEEE
Confidence             24 889999999999999999999999999999999996543  478999999999999972          2455555


Q ss_pred             ecccCCCC--CccChHHHhhhhceeeeeccc
Q 008332          183 RFRYSPPA--NSYLLNSIQRNLNWIHAVTAS  211 (570)
Q Consensus       183 ~~~~~~~~--~~~~~~~l~~~vD~i~vm~yd  211 (570)
                      ++++....  ..|++.++.+++||+++|+||
T Consensus       147 a~~~~~~~~~~~~~~~~l~~~vD~v~vm~Yd  177 (210)
T cd00598         147 AVPASYFDLGYAYDVPAIGDYVDFVNVMTYD  177 (210)
T ss_pred             EecCChHHhhccCCHHHHHhhCCEEEEeeec
Confidence            55554333  238999999999999999998

Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu

>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L

Probab=100.00  E-value=1.2e-32  Score=260.98  Aligned_cols=203  Identities=17%  Similarity=0.129  Sum_probs=142.4

Q ss_pred             CCcCCCCCCCC--cceEEEEeE-EEeCC--ceEEeeCCCcc-HHHHHHHHHHHHhhCCCceEEEEEcCCCCCCccccccc
Q 008332           37 VSTISGINYDL--FTHLICSSA-DINST--TYQLSLSLPSD-ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSM  110 (570)
Q Consensus        37 ~~~~~~i~~~~--~Thii~~~~-~~~~~--~~~~~~~~~~~-~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~  110 (570)
                      ..++++||.+.  ||||||+|+ ..+..  ..+..+...++ +....+.+..+|+++|++|||+|||||....+..+...
T Consensus        12 ~~~~~dip~~~~~~thii~aFa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~p~lKvllSiGG~~~~~~~~~~~~   91 (253)
T cd06544          12 GVTFSDVPINPKVEFHFILSFAIDYDTESNPTNGKFNPYWDTENLTPEAVKSIKAQHPNVKVVISIGGRGVQNNPTPFDP   91 (253)
T ss_pred             CccccccCCCCCeeEEEEEEeeeecccccCCCCCccccccCccccCHHHHHHHHHhCCCcEEEEEeCCCCCCCCccccCc
Confidence            44789999988  999999999 33331  00112222222 22233444569999999999999999986433333334


Q ss_pred             ccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCC
Q 008332          111 VRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA  190 (570)
Q Consensus       111 ~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (570)
                      .+....|++||+|++++|++|||||||||||||.  .++.+|+.|+++||++|+.          ..+++.+++.+....
T Consensus        92 ~~~~~~~~~fv~S~~~~l~~~~fDGiDiDwE~~~--~d~~~f~~ll~~l~~~l~~----------~~~lt~a~vap~~~~  159 (253)
T cd06544          92 SNVDSWVSNAVSSLTSIIQTYNLDGIDIDYEHFP--ADPDTFVECIGQLITELKN----------NGVIKVASIAPSEDA  159 (253)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhCCCceeeecccCC--cCHHHHHHHHHHHHHHhhh----------cCCeEEEEecCCccc
Confidence            4555566778999999999999999999999984  5789999999999999973          113334443333333


Q ss_pred             -CccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCceeeeccccccce
Q 008332          191 -NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAW  267 (570)
Q Consensus       191 -~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~  267 (570)
                       ..+.+..+.+++|+|++|+||+++.+...          .     .....+..+.|. .++|++||++|+|.+++.|
T Consensus       160 ~~~~y~~~~~~~~d~id~~~~qfy~~~~~~----------~-----~~~~~~~~~~~~-~~~p~~Kv~lGl~a~~~~~  221 (253)
T cd06544         160 EQSHYLALYNAYGDYIDYVNYQFYNYGVPT----------T-----VAKYVEFYDEVA-NNYPGKKVLASFSTDGEDG  221 (253)
T ss_pred             cccccHHHHHHhhCceeEEEhhhhCCCCCC----------C-----HHHHHHHHHHHH-hCCCcccEEEEEecCCCcc
Confidence             45558888999999999999998754310          0     011223344443 4699999999999999877

) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.

>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii

Probab=100.00  E-value=1.6e-31  Score=255.41  Aligned_cols=194  Identities=16%  Similarity=0.204  Sum_probs=140.2

Q ss_pred             EEEEEecCCCC--------CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCc-cHH---HHHHHHHHHHhhCCCceEEE
Q 008332           27 IRVGYLNLSEV--------STISGINYDLFTHLICSSADINSTTYQLSLSLPS-DEN---QIAKFADTVKKKNPSITTIL   94 (570)
Q Consensus        27 ~vvgY~~~~~~--------~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~lk~~~~~~kvll   94 (570)
                      |+||||+.|..        +++..++..+||||+|+|+.++.+| ++.+.+.. +..   .+.+-++.+  +++++||++
T Consensus         1 r~v~y~~~~~~~~~~~~~~~~~~~~~~~~~THvi~af~~i~~~G-~l~~~d~~~~~~~~~~~~~~i~~~--~~~g~KVll   77 (256)
T cd06546           1 RLVIYYQTTHPSNGDPISSLLLVTEKGIALTHLIVAALHINDDG-NIHLNDHPPDHPRFTTLWTELAIL--QSSGVKVMG   77 (256)
T ss_pred             CEEEEEccEECCCCCcccccccccCCCCCCceEEEEEEEECCCC-eEEECCCCCCcchhhHHHHHHHHH--HhCCCEEEE
Confidence            58999999941        2233557789999999999999976 66665432 111   222222334  457999999


Q ss_pred             EEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccc
Q 008332           95 SIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQ  174 (570)
Q Consensus        95 sigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~  174 (570)
                      |||||.. +  .|+.+++++++|++|++++++++++|+|||||||||+|.   +..+|..|+++||+++..         
T Consensus        78 SiGG~~~-~--~fs~~a~~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~p~---~~~~~~~ll~~Lr~~~~~---------  142 (256)
T cd06546          78 MLGGAAP-G--SFSRLDDDDEDFERYYGQLRDMIRRRGLDGLDLDVEEPM---SLDGIIRLIDRLRSDFGP---------  142 (256)
T ss_pred             EECCCCC-C--CcccccCCHHHHHHHHHHHHHHHHHhCCCceEEeeecCC---CHhHHHHHHHHHHHHhCC---------
Confidence            9999864 2  388888899999999999999999999999999999984   356999999999988741         


Q ss_pred             cceEEEEeecccC------CCCCccChHHHh----hhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHH
Q 008332          175 QSLLILTARFRYS------PPANSYLLNSIQ----RNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLK  244 (570)
Q Consensus       175 ~~~~~~~~~~~~~------~~~~~~~~~~l~----~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~  244 (570)
                      .  +.+++++...      .....+++..+.    .++||+|+|.||.+|...                    +. ....
T Consensus       143 ~--~~lT~Ap~~~~~~~g~~~~~~~~~~~l~~~~~~~~Df~nvQfYn~~g~~~--------------------~~-~~~~  199 (256)
T cd06546         143 D--FIITLAPVASALTGGEANLSGFDYRELEQARGDKIDFYNAQFYNGFGSMS--------------------SP-SDYD  199 (256)
T ss_pred             C--cEEEECCccccccCCcccccccCHHHHHHhhCCceeEEEEcCcCCCCCcc--------------------CH-HHHH
Confidence            2  3344333211      122456776665    499999999999765321                    01 1123


Q ss_pred             HHHHcCCCCCceeeecc
Q 008332          245 AWIERGLSADKLVMCLP  261 (570)
Q Consensus       245 ~~~~~gvp~~KlvlGip  261 (570)
                      .|++.|+|++||++|+|
T Consensus       200 ~~~~~~~~~~Kv~iGlp  216 (256)
T cd06546         200 AIVAQGWDPERIVIGLL  216 (256)
T ss_pred             HHHHcCCCcccEEEEEe
Confidence            45566899999999999

CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi.

>COG3858 Predicted glycosyl hydrolase [General function prediction only]

Probab=100.00  E-value=1.8e-32  Score=263.85  Aligned_cols=241  Identities=18%  Similarity=0.298  Sum_probs=188.3

Q ss_pred             CceEEEEEcCCC----CCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHh
Q 008332           89 SITTILSIGQGK----DTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAAT  164 (570)
Q Consensus        89 ~~kvllsigg~~----~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~  164 (570)
                      ++|.++.+...+    +.+.+.++.++.++..++++++++++.++.+|+.|+.||+|.. .+.|+..|+.|++++|.+|+
T Consensus       160 ~i~~~~~iSN~~~~~~~f~~ela~~lL~net~~~~~i~~ii~~l~~~Gyrgv~iDfE~v-~~~DR~~yt~flR~~r~~l~  238 (423)
T COG3858         160 KIKPVPGISNGTRPGANFGGELAQLLLNNETAKNRLINNIITLLDARGYRGVNIDFENV-GPGDRELYTDFLRQVRDALH  238 (423)
T ss_pred             ccceeEEEecCCccccccchHHHHHHHhcHHHHHHHHHHHHHHHHhcCcccEEechhhC-CHHHHHHHHHHHHHHHHHhc
Confidence            356665554332    2334456899999999999999999999999999999999987 56899999999999999998


Q ss_pred             hhhhcccccccceEEEEeecccCC-------CCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 008332          165 KLDAKNSTRQQSLLILTARFRYSP-------PANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR  237 (570)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~  237 (570)
                                ...+.++.++++..       +...||+.++++++||+.+|+||.|..|  +.+|+.||..         
T Consensus       239 ----------~~G~~~siAvaakt~~~~~G~W~~~~dy~a~Gkiad~v~lMtYd~h~~g--G~PG~vA~i~---------  297 (423)
T COG3858         239 ----------SGGYTVSIAVAAKTSDLQVGSWHGAYDYVALGKIADFVILMTYDWHYSG--GPPGPVASIG---------  297 (423)
T ss_pred             ----------cCCeEEEEEecCCCCCCcCccccchhhhhhhceeeeEEEEEEeccCcCC--CCCCcccCch---------
Confidence                      34455555554432       4578999999999999999999998665  5688888876         


Q ss_pred             CHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceE
Q 008332          238 STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE  317 (570)
Q Consensus       238 ~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~  317 (570)
                      +|+..+++.+.. +|++||+||+|+||++|.+..+. .+.+..         . +++.+-......++  .+..||..++
T Consensus       298 ~vr~~ieya~T~-iP~~Kv~mGip~YGYDW~~~y~~-~g~~~~---------a-~~~~~~i~ia~~y~--A~Iq~D~~~q  363 (423)
T COG3858         298 WVRKVIEYALTV-IPAEKVMMGIPLYGYDWTLPYDP-LGYLAR---------A-ISPDEAIDIANRYN--ATIQYDATSQ  363 (423)
T ss_pred             hHhhhhhhhhee-cchHHeEEccccccccccCCCCC-Ccceee---------e-cCcchhhhhhcccC--CccCcCcccc
Confidence            888888888886 99999999999999999764321 011111         1 23333223333344  6778999999


Q ss_pred             EEEeec----C-CEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChh-hHH
Q 008332          318 VNYFST----G-TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD-WLL  365 (570)
Q Consensus       318 ~~y~~~----~-~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~-~~~  365 (570)
                      .||++.    + .++++|||.+|++.|.+++|++||.||++|.|++.|.+ |+.
T Consensus       364 sp~F~y~D~eg~~h~VWfeD~~s~~~k~~lik~ygl~GVs~W~Lg~e~p~~w~~  417 (423)
T COG3858         364 SPFFYYVDKEGRYHEVWFEDARSFQTKLDLIKEYGLRGVSYWVLGQEDPRNWTY  417 (423)
T ss_pred             CceEEEEcCCCceEEEEcCchHHHHHHHHHHHHcCCceEEEEEecCcchhHHhh
Confidence            998843    3 67888999999999999999999999999999998865 554

>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD)

Probab=99.97  E-value=1.5e-29  Score=250.47  Aligned_cols=208  Identities=18%  Similarity=0.245  Sum_probs=142.3

Q ss_pred             eEEEEEecCCCCC------cCCCCCCCCcceEEEEeEEEeCCce-EEeeC-----CCccHHHHHHHHHHHHhhCCCceEE
Q 008332           26 WIRVGYLNLSEVS------TISGINYDLFTHLICSSADINSTTY-QLSLS-----LPSDENQIAKFADTVKKKNPSITTI   93 (570)
Q Consensus        26 ~~vvgY~~~~~~~------~~~~i~~~~~Thii~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~lk~~~~~~kvl   93 (570)
                      ++++|||++|+..      +++.+ .+.||||+++|+.++.++. .+.+.     .......+.+.++.+|++  ++||+
T Consensus         1 k~~vgY~~~w~~~~~~~~~~~~~~-~~~yt~i~~AF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~q~~--G~KVl   77 (312)
T cd02871           1 KVLVGYWHNWDNGAGSGRQDLDDV-PSKYNVINVAFAEPTSDGGGEVTFNNGSSPGGYSPAEFKADIKALQAK--GKKVL   77 (312)
T ss_pred             CeEEEecCcccCCCCCCCCCcccC-CCCCCEEEEcceeecCCCceeEeecccCCcccCChHHHHHHHHHHHHC--CCEEE
Confidence            5789999999633      34444 4889999999999987642 22221     222334556666667664  69999


Q ss_pred             EEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCC----CCccchhhhHHHHHHHHhhhhhc
Q 008332           94 LSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS----TDMFNIGLLFDEWRIAATKLDAK  169 (570)
Q Consensus        94 lsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~----~~~~~~~~l~~~lr~~l~~~~~~  169 (570)
                      +||||+..+      ..+++++.|++|++++++++++|+|||||||||+|...    +++.++..|+++||.++.     
T Consensus        78 lSiGG~~~~------~~~~~~~~~~~fa~sl~~~~~~~g~DGiDiD~E~~~~~~~~~~~~~~~~~~lk~lr~~~~-----  146 (312)
T cd02871          78 ISIGGANGH------VDLNHTAQEDNFVDSIVAIIKEYGFDGLDIDLESGSNPLNATPVITNLISALKQLKDHYG-----  146 (312)
T ss_pred             EEEeCCCCc------cccCCHHHHHHHHHHHHHHHHHhCCCeEEEecccCCccCCcHHHHHHHHHHHHHHHHHcC-----
Confidence            999997642      23778899999999999999999999999999998543    356899999999998774     


Q ss_pred             ccccccceEEEEeecccCCC----------CCcc--ChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 008332          170 NSTRQQSLLILTARFRYSPP----------ANSY--LLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR  237 (570)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~----------~~~~--~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~  237 (570)
                           . .+.+++++.....          ...|  .+.++.+++||+|+|+||.++.+.  ..+   .-+.    ....
T Consensus       147 -----~-~~~lT~AP~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~D~invqfYn~~~~~~--~~~---~~~~----~~~~  211 (312)
T cd02871         147 -----P-NFILTMAPETPYVQGGYAAYGGIWGAYLPLIDNLRDDLTWLNVQYYNSGGMGG--CDG---QSYS----QGTA  211 (312)
T ss_pred             -----C-CeEEEECCCcccccCcccccccCCcchhHHHHHhhhheeEEEEeeccCCCccc--ccc---cCCc----cchh
Confidence                 1 3455554432111          1223  367888999999999999876421  010   0000    0011


Q ss_pred             CHHHHHHHHHHcC-----------CCCCceeeeccc
Q 008332          238 STDQVLKAWIERG-----------LSADKLVMCLPF  262 (570)
Q Consensus       238 ~v~~~v~~~~~~g-----------vp~~KlvlGip~  262 (570)
                      ....++...+..|           +|++||++|+|.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~Kv~iG~pa  247 (312)
T cd02871         212 DFLVALADMLLTGFPIAGNDRFPPLPADKVVIGLPA  247 (312)
T ss_pred             HHHHHHHHHHHcCCCccCCcccccCChhhEEEeccC
Confidence            2333344445555           899999999995

ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.

>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism]

Probab=99.92  E-value=5.6e-24  Score=195.22  Aligned_cols=290  Identities=13%  Similarity=0.117  Sum_probs=214.5

Q ss_pred             eEEEEEecCCC--CCcCCCCCCCCcceEEEEeEEEeCCceEE--eeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCC
Q 008332           26 WIRVGYLNLSE--VSTISGINYDLFTHLICSSADINSTTYQL--SLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKD  101 (570)
Q Consensus        26 ~~vvgY~~~~~--~~~~~~i~~~~~Thii~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~  101 (570)
                      .-+.||.++|+  .|++..|-.+++|||..-+..+...|..+  ....+.|.    .+++++++++++++++.-+--...
T Consensus        79 ~~vLayVTPWNs~Gydvakifaskft~iSPVW~ql~~qgs~~~v~G~hdid~----gwiralRk~~~~l~ivPR~~fd~~  154 (392)
T KOG2091|consen   79 GTVLAYVTPWNSHGYDVAKIFASKFTYISPVWLQLKDQGSDVGVYGKHDIDP----GWIRALRKSGKDLHIVPRFYFDEF  154 (392)
T ss_pred             CceEEEecCcCccchhHHHHHhcccceecchheeehhcCcceEEeecccCCh----HHHHHHHHhCCCceeeceehhhhc
Confidence            34799999997  78999999999999999999888654333  33333333    345568899999999888775333


Q ss_pred             CCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeecc-CCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEE
Q 008332          102 TNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT-APNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLIL  180 (570)
Q Consensus       102 ~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE-~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~  180 (570)
                       .++.+..++.+++.|++..+.++++.+++||||+.|+-- .-.+.-+......|++.|-.+|++.        .-..++
T Consensus       155 -~~~d~ke~l~ke~l~ekv~~tlv~~ck~~~fdGlVlevwsq~a~~i~d~~al~~v~hl~k~Lhkq--------~l~~iL  225 (392)
T KOG2091|consen  155 -TSADLKEFLVKEALREKVGQTLVNFCKKHGFDGLVLEVWSQLADVIADKDALELVEHLGKALHKQ--------ELQAIL  225 (392)
T ss_pred             -cchHHHHHhhhHHHHHHHHHHHHHHHHHcCCCeeeHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh--------heEEEE
Confidence             677788999999999999999999999999999999743 1111111133455777777777742        222333


Q ss_pred             EeecccCCCC------CccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCC
Q 008332          181 TARFRYSPPA------NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSAD  254 (570)
Q Consensus       181 ~~~~~~~~~~------~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~  254 (570)
                      +++++.....      ..-+++.|...+|.+.+|||||.++   .-+||+||+.         +++.++....-...-+.
T Consensus       226 vvPp~~~~e~~~~~~ft~ee~~~L~~~~d~fsLmTYd~s~~---~~pg~nap~~---------wi~~~l~~l~~~s~~r~  293 (392)
T KOG2091|consen  226 VVPPVIEEENGQLKFFTPEEFSKLVAVYDGFSLMTYDYSLV---QGPGPNAPLE---------WIRHCLHHLGGSSAKRP  293 (392)
T ss_pred             EeCCCCcCCCCCcCcCCHHHHHHHHHhhhheeEEEeecccc---cCCCCCCCHH---------HHHHHHHHhCCcccccc
Confidence            3333222111      2234778999999999999999764   3489999987         89999887765556678


Q ss_pred             ceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEee-----cCCEEEe
Q 008332          255 KLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFS-----TGTVWFG  329 (570)
Q Consensus       255 KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~-----~~~~~i~  329 (570)
                      |+.+|+.|||..|...+      |          .+.++-..-...++...  ..-.||+.+...++.     +++.-|.
T Consensus       294 KiLlGlNFYG~d~~~gd------g----------~~~IT~~rYL~lLk~~k--~~~~~Dees~EH~f~~k~n~~gkhivf  355 (392)
T KOG2091|consen  294 KILLGLNFYGNDFNLGD------G----------GEAITAKRYLQLLKGEK--SVFKFDEESKEHFFEYKRNDDGKHIVF  355 (392)
T ss_pred             ceeEeeeccccccccCC------C----------CCceeHHHHHHHHhccC--cceeeccccchhheeeeccCCCceEEE
Confidence            99999999999996411      1          12266666666677665  677899998877663     2467788


Q ss_pred             ccCHHHHHHHHHhhhccCCceEEEEEcccc
Q 008332          330 FDDVEAVRAKIAYAKEKRLLGYYAWQVSFD  359 (570)
Q Consensus       330 ydd~~Si~~K~~~~~~~gLgGv~~W~l~~D  359 (570)
                      |.+..|+..++++|++.| .||+||++++-
T Consensus       356 yPTL~Sl~~Ri~lA~~~g-vgISIWe~GqG  384 (392)
T KOG2091|consen  356 YPTLTSLELRIELARELG-VGISIWEYGQG  384 (392)
T ss_pred             ecchHhHHHHHHHHHHhC-CceEeeeccCc
Confidence            999999999999999999 59999999763

>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins

Probab=99.91  E-value=2.6e-23  Score=201.28  Aligned_cols=229  Identities=12%  Similarity=0.063  Sum_probs=157.9

Q ss_pred             EEEEEecCCCC------CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCC
Q 008332           27 IRVGYLNLSEV------STISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGK  100 (570)
Q Consensus        27 ~vvgY~~~~~~------~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~  100 (570)
                      +.+|||.+|..      ..+.++| +.+++|++.++.++.++...   .........+.++.+|++  ++||+++|||+.
T Consensus         2 ~~~~y~~~~~~~~~~~~~~l~~~p-ds~D~v~lf~~~~~~~~~~~---~~~~~~~~~~~i~~l~~k--G~KVl~sigg~~   75 (255)
T cd06542           2 ISFGYFEVWDDKGASLQESLLNLP-DSVDMVSLFAANINLDAATA---VQFLLTNKETYIRPLQAK--GTKVLLSILGNH   75 (255)
T ss_pred             eEEEEEEecCCcCcccccccccCC-CcceEEEEcccccCcccccc---hhhhhHHHHHHHHHHhhC--CCEEEEEECCCC
Confidence            57899999974      5666776 56888887554444332100   111223345555556554  789999999976


Q ss_pred             CCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCC------CCccchhhhHHHHHHHHhhhhhcccccc
Q 008332          101 DTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS------TDMFNIGLLFDEWRIAATKLDAKNSTRQ  174 (570)
Q Consensus       101 ~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~------~~~~~~~~l~~~lr~~l~~~~~~~~~~~  174 (570)
                      ...  .| ....+++.|++|++++++++++|||||||||||+|...      .+..+|..|+++||..+..         
T Consensus        76 ~~~--~~-~~~~~~~~~~~fa~~l~~~v~~yglDGiDiD~E~~~~~~~~~~~~~~~~~~~lv~~Lr~~~~~---------  143 (255)
T cd06542          76 LGA--GF-ANNLSDAAAKAYAKAIVDTVDKYGLDGVDFDDEYSGYGKNGTSQPSNEAFVRLIKELRKYMGP---------  143 (255)
T ss_pred             CCC--Cc-cccCCHHHHHHHHHHHHHHHHHhCCCceEEeeeecccCCCCCCcchHHHHHHHHHHHHHHhCc---------
Confidence            432  23 34568899999999999999999999999999998542      3678999999999998852         


Q ss_pred             cceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCC
Q 008332          175 QSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSAD  254 (570)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~  254 (570)
                       ....++++..+....  .+.+++.+++||+++|+||-++...    ..    +               ......|+|++
T Consensus       144 -~~kllt~~~~~~~~~--~~~~~~~~~vDyv~~~~y~~~~~~~----~~----~---------------~~~~~~g~~~~  197 (255)
T cd06542         144 -TDKLLTIDGYGQALS--NDGEEVSPYVDYVIYQYYGSSSSST----QR----N---------------WNTNSPKIPPE  197 (255)
T ss_pred             -CCcEEEEEecCCchh--cCHHHHHHhCCEEEeeccCCCCccC----Cc----c---------------cccccCCCCHH
Confidence             123344433332211  1678999999999999998643211    00    0               01124579999


Q ss_pred             ceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHH
Q 008332          255 KLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVE  334 (570)
Q Consensus       255 KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~  334 (570)
                      |+++|+++++...+                                                              ....
T Consensus       198 k~i~~~~~~~~~~~--------------------------------------------------------------~~~~  215 (255)
T cd06542         198 KMVYTESFEEENGG--------------------------------------------------------------NSGS  215 (255)
T ss_pred             HceeeeeeecccCC--------------------------------------------------------------Ccch
Confidence            99999998864220                                                              1234


Q ss_pred             HHHHHHHhhhcc-CCceEEEEEccccCh
Q 008332          335 AVRAKIAYAKEK-RLLGYYAWQVSFDDH  361 (570)
Q Consensus       335 Si~~K~~~~~~~-gLgGv~~W~l~~Dd~  361 (570)
                      ++...++++.+. +.||+|+|.++.|..
T Consensus       216 ~~~~~A~~~~~~~~~gG~~~y~~~~dy~  243 (255)
T cd06542         216 SAEQYARWTPAKGGKGGIGTYALDRDYY  243 (255)
T ss_pred             hHHHHHhcCcccCceEEEEEEecCCCcc
Confidence            566677788877 999999999999864

The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.

>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain

Probab=99.86  E-value=5.2e-20  Score=177.22  Aligned_cols=183  Identities=16%  Similarity=0.099  Sum_probs=118.9

Q ss_pred             CCcceEEEEeEEEeCCce--EEeeCCCccH------HHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHH
Q 008332           46 DLFTHLICSSADINSTTY--QLSLSLPSDE------NQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHR  117 (570)
Q Consensus        46 ~~~Thii~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r  117 (570)
                      ..++-|+++|+..-.++.  .+.+...-..      ..+.+.++.+++  +++|||||||||..+.+  |    ++++.|
T Consensus        23 ~~~dii~i~Fl~~~~~~~~p~~n~~~~c~~~~~~~c~~~~~dI~~cq~--~G~KVlLSIGG~~~~~~--~----~s~~~a   94 (280)
T cd02877          23 GNYDIVNISFLNVFGSGGTPGLNFAGHCGGSTYPNCPQLGADIKHCQS--KGKKVLLSIGGAGGSYS--L----SSDADA   94 (280)
T ss_pred             CCccEEEEEeEcccCCCCCcccCccccCcccccccchhHHHHHHHHHH--CCCEEEEEccCCCCCcC--C----CCHHHH
Confidence            357888899986654421  2333221111      245666665544  58999999999875322  2    788999


Q ss_pred             HHHHHHHHHHH------------HHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecc
Q 008332          118 KSFIDSSIRIA------------RLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFR  185 (570)
Q Consensus       118 ~~fi~siv~~~------------~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~  185 (570)
                      ++|++++.++.            .+++|||||||||+|..    .+|..|+++||+.+....       ...+.|++++.
T Consensus        95 ~~Fa~~l~~~~~~~~~~~~~rp~g~~~lDGiD~D~E~~~~----~~~~~l~~~LR~~~~~~~-------~~~~~LTaAPq  163 (280)
T cd02877          95 KDFADYLWNAFGGGTDSGVPRPFGDAVVDGFDFDIEHGSP----ENYDALAKRLRSLFASDP-------SKKYYLTAAPQ  163 (280)
T ss_pred             HHHHHHHHHHhCCccccccccccccccccceEEecccCCc----cCHHHHHHHHHHHhhccc-------CCceEEEeccc
Confidence            99999998775            26789999999999853    689999999999886310       23456666544


Q ss_pred             cCCCCCccChHHHhh-hhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCC---Cceeeecc
Q 008332          186 YSPPANSYLLNSIQR-NLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSA---DKLVMCLP  261 (570)
Q Consensus       186 ~~~~~~~~~~~~l~~-~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~---~KlvlGip  261 (570)
                      . +....+....+.. ++||++||+||..+-  ....+.            ........+.|... ++.   .||++|+|
T Consensus       164 ~-~~~d~~~~~~i~~~~~D~i~vqfYn~~~c--~~~~~~------------~~~~~~~~~~w~~~-~~~~~~~kv~lGlp  227 (280)
T cd02877         164 C-PYPDASLGDAIATGLFDFIFVQFYNNPCC--SYASGN------------ASGFNFNWDTWTSW-AKATSNAKVFLGLP  227 (280)
T ss_pred             c-CCcchhHHHHHccCccCEEEEEEecCccc--cccccc------------cchhhhHHHHHHHh-cccCCCceEEEecc
Confidence            3 2223345555664 999999999997431  000000            01223445566655 555   89999999


Q ss_pred             cc
Q 008332          262 FY  263 (570)
Q Consensus       262 ~y  263 (570)
                      ..
T Consensus       228 as  229 (280)
T cd02877         228 AS  229 (280)
T ss_pred             cC
Confidence            43

Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin.

>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain

Probab=99.85  E-value=1.6e-20  Score=181.97  Aligned_cols=150  Identities=11%  Similarity=0.061  Sum_probs=109.5

Q ss_pred             CCcceEEEEeEEEeCCceEEeeCCC--cc-HHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHH
Q 008332           46 DLFTHLICSSADINSTTYQLSLSLP--SD-ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFID  122 (570)
Q Consensus        46 ~~~Thii~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~  122 (570)
                      ..|+|++++|+....++ +......  .+ ...+.+.++.+|+++  +||++|+|||.+.   .|   ..+...|++|++
T Consensus        24 ~g~~~v~lAFi~~~~~~-~~~w~g~~~~~~~~~~~~~i~~lk~~G--~kViiS~GG~~g~---~~---~~~~~~~~~~~~   94 (294)
T cd06543          24 TGVKAFTLAFIVASGGC-KPAWGGSYPLDQGGWIKSDIAALRAAG--GDVIVSFGGASGT---PL---ATSCTSADQLAA   94 (294)
T ss_pred             cCCCEEEEEEEEcCCCC-cccCCCCCCcccchhHHHHHHHHHHcC--CeEEEEecCCCCC---cc---ccCcccHHHHHH
Confidence            57999999999887543 4444332  11 334455566788875  8999999998752   23   337789999999


Q ss_pred             HHHHHHHHcCCCceeeeccCCCCCCCc---cchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCC-CccChHHH
Q 008332          123 SSIRIARLYGFRGLDFAWTAPNTSTDM---FNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-NSYLLNSI  198 (570)
Q Consensus       123 siv~~~~~~~~DGidiDwE~p~~~~~~---~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l  198 (570)
                      ++.+++++|+|||||||||+|. ..++   .++...+++|++++.          +..+++++++.+.... .++++-+.
T Consensus        95 a~~~~i~~y~~dgiDfDiE~~~-~~d~~~~~~~~~al~~Lq~~~p----------~l~vs~Tlp~~p~gl~~~g~~~l~~  163 (294)
T cd06543          95 AYQKVIDAYGLTHLDFDIEGGA-LTDTAAIDRRAQALALLQKEYP----------DLKISFTLPVLPTGLTPDGLNVLEA  163 (294)
T ss_pred             HHHHHHHHhCCCeEEEeccCCc-cccchhHHHHHHHHHHHHHHCC----------CcEEEEecCCCCCCCChhHHHHHHH
Confidence            9999999999999999999984 4554   677777777776553          4455555554443222 56677777


Q ss_pred             hh----hhceeeeecccCCCC
Q 008332          199 QR----NLNWIHAVTASYYEP  215 (570)
Q Consensus       199 ~~----~vD~i~vm~yd~~~~  215 (570)
                      ++    .+|+||||+|||++.
T Consensus       164 a~~~Gv~~d~VNiMtmDyg~~  184 (294)
T cd06543         164 AAANGVDLDTVNIMTMDYGSS  184 (294)
T ss_pred             HHHcCCCcceeeeeeecCCCC
Confidence            77    899999999999753

Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.

>COG3469 Chitinase [Carbohydrate transport and metabolism]

Probab=99.77  E-value=4.9e-17  Score=145.31  Aligned_cols=177  Identities=13%  Similarity=0.215  Sum_probs=115.2

Q ss_pred             CCCCeEEEEEecCCC--------CCcCCCCCC----CCcceEEEEeEEEeCCceEEeeCCCc-cHHHHHHHHHHHHhhCC
Q 008332           22 KAKPWIRVGYLNLSE--------VSTISGINY----DLFTHLICSSADINSTTYQLSLSLPS-DENQIAKFADTVKKKNP   88 (570)
Q Consensus        22 ~~~~~~vvgY~~~~~--------~~~~~~i~~----~~~Thii~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lk~~~~   88 (570)
                      ++++++.||||++|.        .-+..+|.+    ..++.+..+|+.-..+  ..++.+.. .+..|++.+..|.++  
T Consensus        22 ~~~~KvLvGyWHnw~sgaaDgyq~gs~adial~d~~~~ynvv~V~Fmk~~g~--iptf~P~~~~daeFr~~v~aLnae--   97 (332)
T COG3469          22 DISNKVLVGYWHNWKSGAADGYQQGSSADIALADTPRNYNVVTVSFMKGAGD--IPTFKPYNDPDAEFRAQVGALNAE--   97 (332)
T ss_pred             ccccceEEEeeecccccccccccccceeeeEeccCCcccceEEEEEeecCCC--CcccCcCCCCHHHHHHHHHHhhcc--
Confidence            445579999999994        122223322    2366677777654432  33344332 346788887777666  


Q ss_pred             CceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC--CCCccchhhhHHHHHHHHhhh
Q 008332           89 SITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT--STDMFNIGLLFDEWRIAATKL  166 (570)
Q Consensus        89 ~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~--~~~~~~~~~l~~~lr~~l~~~  166 (570)
                      +--++||+||...       ++--+....+.|+++|++++++|||||+|||.|.-..  .+...-.-..++.+|+.-+..
T Consensus        98 GkavllsLGGAdg-------hIeL~~~qE~~fv~eiirlietyGFDGLDiDLEq~ai~~~dnq~v~p~alk~vk~hyk~~  170 (332)
T COG3469          98 GKAVLLSLGGADG-------HIELKAGQEQAFVNEIIRLIETYGFDGLDIDLEQSAILAADNQTVIPAALKAVKDHYKNQ  170 (332)
T ss_pred             CcEEEEEccCccc-------eEEeccchHHHHHHHHHHHHHHhCCCccccchhhhhhhhcCCeeehHHHHHHHHHHHHhc
Confidence            5689999998653       1222334478999999999999999999999996521  122334556777777665532


Q ss_pred             hhcccccccceEEEEeecccCCCCCccC--hHHHhhhhceeeeecccCCCC
Q 008332          167 DAKNSTRQQSLLILTARFRYSPPANSYL--LNSIQRNLNWIHAVTASYYEP  215 (570)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~vD~i~vm~yd~~~~  215 (570)
                            .+...+++++..++....+.|.  +.++..+.|||+++-|+.-|.
T Consensus       171 ------Gk~f~itMAPEfPYl~~~gaY~pyin~l~~~yD~i~pQlYNqGGd  215 (332)
T COG3469         171 ------GKNFFITMAPEFPYLQGWGAYIPYINELRDYYDFIAPQLYNQGGD  215 (332)
T ss_pred             ------CCceEEEecCCCceecCCcccchHHHHHhhHHhhhhHHHhcCCCC
Confidence                  2244455555555544444444  788999999999999997653

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=7.7e-18  Score=169.70  Aligned_cols=118  Identities=46%  Similarity=0.780  Sum_probs=105.1

Q ss_pred             CccccChHHHHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEE
Q 008332          450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC  529 (570)
Q Consensus       450 ~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~  529 (570)
                      ....|++.++..++++|...+.||+|+||.||+|.++++..||||++.....+...+|.+|+.++.+++|||+|+|+|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45678999999999999999999999999999999998899999988654433145699999999999999999999999


Q ss_pred             EeCC-eeEEEEecCCCCCHHHHHhcCCCCcccccHhhhhcc
Q 008332          530 IDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY  569 (570)
Q Consensus       530 ~~~~-~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~~  569 (570)
                      .+.+ +.+||||||++|+|.++|+.....  +++|.+.++|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kI  179 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKI  179 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHH
Confidence            9998 599999999999999999986554  7899988765

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.73  E-value=4.4e-18  Score=175.31  Aligned_cols=108  Identities=30%  Similarity=0.401  Sum_probs=92.3

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      ++....+++.++||.|.||.|++|.++.    ...||||.|+... ...+.+|+.|+.+|++++||||++|-|+.....+
T Consensus       625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P  704 (996)
T KOG0196|consen  625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP  704 (996)
T ss_pred             hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence            4445668889999999999999999632    3479999998543 3456789999999999999999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          535 RMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      .|||+|||+||+|..||+.+++.+....+.-+|
T Consensus       705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgML  737 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGML  737 (996)
T ss_pred             eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHH
Confidence            999999999999999999988877766665554

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.70  E-value=2.7e-17  Score=172.52  Aligned_cols=99  Identities=29%  Similarity=0.546  Sum_probs=85.6

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEE
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFC  529 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~  529 (570)
                      ...+..+.++...+.||+|+||+||+|+..      ..+.||||.+++.... ..++|++|+++|.+++|||||+|+|+|
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC  558 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC  558 (774)
T ss_pred             ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence            334566777888899999999999999832      2457999999865554 678999999999999999999999999


Q ss_pred             EeCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          530 IDSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       530 ~~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ..+++.+||+|||.+|||++||+...
T Consensus       559 ~~~~P~~MvFEYm~~GDL~eFLra~s  584 (774)
T KOG1026|consen  559 REGDPLCMVFEYMDHGDLHEFLRARS  584 (774)
T ss_pred             ccCCeeEEEEEecccccHHHHHHhhC
Confidence            99999999999999999999999443

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.66  E-value=3.4e-16  Score=156.62  Aligned_cols=95  Identities=28%  Similarity=0.514  Sum_probs=85.6

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +.++..+.+.+.||+|.||+|..|....+..||||.++.. ....+.+|.+|+++|.+++||||++|+|+|..++++++|
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI  613 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI  613 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence            4555667778999999999999999987899999999854 445568999999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      +|||++|+|.+||...
T Consensus       614 ~EYmEnGDLnqFl~ah  629 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAH  629 (807)
T ss_pred             HHHHhcCcHHHHHHhc
Confidence            9999999999999865

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.56  E-value=3.3e-15  Score=149.54  Aligned_cols=109  Identities=28%  Similarity=0.449  Sum_probs=89.8

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ..++..+..+++.+.||+|.||.|+.|.++....||+|.++.. ....+.|.+|+.+|.+|+|+|||+++|+|..+.+++
T Consensus       199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy  277 (468)
T KOG0197|consen  199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY  277 (468)
T ss_pred             CCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence            3345556667778999999999999999997779999999654 334578999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      ||||||++|+|.+||+..  ....+..++.++
T Consensus       278 IVtE~m~~GsLl~yLr~~--~~~~l~~~~Ll~  307 (468)
T KOG0197|consen  278 IVTEYMPKGSLLDYLRTR--EGGLLNLPQLLD  307 (468)
T ss_pred             EEEEecccCcHHHHhhhc--CCCccchHHHHH
Confidence            999999999999999972  233344444443

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.56  E-value=9.4e-15  Score=141.16  Aligned_cols=92  Identities=25%  Similarity=0.444  Sum_probs=81.3

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .+|.+.+.||+|+||.||+|+ ..++..||||++...  .....+.+..|+.++++++|||||+|+.+++.++.++||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            456677789999999999999 456789999999644  45556778999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcCC
Q 008332          541 YMPNKSLDCYLFGLS  555 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~  555 (570)
                      ||.+|+|.+||+.++
T Consensus        90 yC~gGDLs~yi~~~~  104 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRG  104 (429)
T ss_pred             eCCCCCHHHHHHHcC
Confidence            999999999999764

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.54  E-value=1.6e-14  Score=141.79  Aligned_cols=98  Identities=26%  Similarity=0.437  Sum_probs=81.6

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHc--cCCCCccceeEEEEeCC----eeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK--LQHVNLIRVLGFCIDSE----ERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~--l~h~niv~l~g~~~~~~----~~~  536 (570)
                      ...+++.+++|+|+||.||+|.+. ++.||||+++.   +..+.|+.|-.+...  ++|+||+++++......    +.+
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            345677799999999999999998 69999999953   345678888877765  68999999999887665    789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCcccccHhhhhcc
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY  569 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~~  569 (570)
                      ||+||.++|+|.+||..     +..+|...|+|
T Consensus       285 LVt~fh~kGsL~dyL~~-----ntisw~~~cri  312 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKA-----NTISWNSLCRI  312 (534)
T ss_pred             EEeeeccCCcHHHHHHh-----ccccHHHHHHH
Confidence            99999999999999984     55688877764

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.50  E-value=3.1e-14  Score=144.77  Aligned_cols=108  Identities=31%  Similarity=0.445  Sum_probs=87.8

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEecC--C--cE-EEEEEecC---CCcccHHHHHHHHHHHHccCCCCccceeEE
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVLPC--G--EV-IAVKKLSK---TSTQGFEEFKNEVMLTAKLQHVNLIRVLGF  528 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~--~--~~-vavK~l~~---~~~~~~~~f~~e~~~l~~l~h~niv~l~g~  528 (570)
                      ..++..-+++.+.+.||+|+||.||+|.+..  +  .. ||||..+.   .......+|++|+++|.+++|||||+++|+
T Consensus       150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV  229 (474)
T KOG0194|consen  150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV  229 (474)
T ss_pred             cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            3345555677778999999999999999643  2  23 89999874   334556789999999999999999999999


Q ss_pred             EEeCCeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          529 CIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       529 ~~~~~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +...++++||||+|+||+|.+||++...   .++..+.+
T Consensus       230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~  265 (474)
T KOG0194|consen  230 AVLEEPLMLVMELCNGGSLDDYLKKNKK---SLPTLEKL  265 (474)
T ss_pred             EcCCCccEEEEEecCCCcHHHHHHhCCC---CCCHHHHH
Confidence            9999999999999999999999997544   34555444

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.48  E-value=4.2e-14  Score=137.81  Aligned_cols=90  Identities=23%  Similarity=0.385  Sum_probs=76.2

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHc--cCCCCccceeEEEEeC----C
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK--LQHVNLIRVLGFCIDS----E  533 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~--l~h~niv~l~g~~~~~----~  533 (570)
                      ......+.+.+.||+|+||.||+|.++ |+.||||++..   .+...|.+|.++...  ++|+||+.+++.-...    .
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T  282 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT  282 (513)
T ss_pred             HhhhheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence            334456889999999999999999999 99999999943   334568889999887  4999999999886554    3


Q ss_pred             eeEEEEecCCCCCHHHHHhc
Q 008332          534 ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~  553 (570)
                      +++||++|.++|||++||..
T Consensus       283 QLwLvTdYHe~GSL~DyL~r  302 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLNR  302 (513)
T ss_pred             EEEEeeecccCCcHHHHHhh
Confidence            78999999999999999985

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.46  E-value=1.2e-13  Score=138.39  Aligned_cols=102  Identities=30%  Similarity=0.529  Sum_probs=83.0

Q ss_pred             CcccceeeeccCCccEEEEEecCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCC-eeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e~  541 (570)
                      .+...+.+|+|+||+||+|.++....||||++.....  ...+.|.+|+.+|.+++|||||+|+|+|..+. ..+|||||
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            3444567999999999999998434499999964332  22568999999999999999999999999888 79999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      |++|+|.++|++.  +...+++..+++
T Consensus       122 ~~~GsL~~~l~~~--~~~~l~~~~~l~  146 (362)
T KOG0192|consen  122 MPGGSLSVLLHKK--RKRKLPLKVRLR  146 (362)
T ss_pred             CCCCcHHHHHhhc--ccCCCCHHHHHH
Confidence            9999999999975  344556655544

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.45  E-value=7.6e-14  Score=152.22  Aligned_cols=98  Identities=30%  Similarity=0.579  Sum_probs=85.0

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecC--Cc----EEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPC--GE----VIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE  533 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--~~----~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~  533 (570)
                      ..+.++++.+.||+|.||.||+|.+.+  |.    .||||.++.. +.+...+|++|+.+|++++|||||+++|+|.+..
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            446678889999999999999999643  32    4999999754 4566678999999999999999999999999999


Q ss_pred             eeEEEEecCCCCCHHHHHhcCCCCc
Q 008332          534 ERMLIYEYMPNKSLDCYLFGLSHQK  558 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~~~~~  558 (570)
                      +.+|++|||++|+|..||++.|...
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~~  793 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPAP  793 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhccccc
Confidence            9999999999999999999886543

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.36  E-value=4e-13  Score=135.57  Aligned_cols=99  Identities=32%  Similarity=0.522  Sum_probs=86.8

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      .+++..+.++.....||-|.+|.||.|.+ +-...||||.|+.. ....++|+.|+.+|+.++|||+|+|+|+|....+.
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            45666677788889999999999999995 44678999999643 34568999999999999999999999999999999


Q ss_pred             EEEEecCCCCCHHHHHhcCCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      |||+|||..|+|.+||++..+
T Consensus       339 YIiTEfM~yGNLLdYLRecnr  359 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECNR  359 (1157)
T ss_pred             EEEEecccCccHHHHHHHhch
Confidence            999999999999999997644

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.36  E-value=4.9e-13  Score=139.11  Aligned_cols=90  Identities=37%  Similarity=0.575  Sum_probs=76.2

Q ss_pred             ccceeeeccCCccEEEEE-ecCCc----EEEEEEecC-CCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          467 SIRNKLGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~-~~~~~----~vavK~l~~-~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +..++||+|+||.||+|. +..|+    +||+|++.. ...+...++++|+-+|.+++|||+++|+|+|.... +.||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            345899999999999998 34343    799999864 44455679999999999999999999999998665 889999


Q ss_pred             cCCCCCHHHHHhcCCCC
Q 008332          541 YMPNKSLDCYLFGLSHQ  557 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~  557 (570)
                      ||+.|+|.+|++..|.+
T Consensus       778 ~mP~G~LlDyvr~hr~~  794 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHRDN  794 (1177)
T ss_pred             hcccchHHHHHHHhhcc
Confidence            99999999999976643

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.29  E-value=3.4e-11  Score=139.44  Aligned_cols=86  Identities=28%  Similarity=0.452  Sum_probs=73.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ..+...++||+|+||.||+|.. .++..||||.+......    ...|+..+.+++|||||+++|+|......++||||+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            4466678999999999999995 56889999998643322    234678899999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 008332          543 PNKSLDCYLFG  553 (570)
Q Consensus       543 ~~GsL~~~L~~  553 (570)
                      ++|+|.++|++
T Consensus       766 ~~g~L~~~l~~  776 (968)
T PLN00113        766 EGKNLSEVLRN  776 (968)
T ss_pred             CCCcHHHHHhc
Confidence            99999999963

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.25  E-value=3.2e-12  Score=130.97  Aligned_cols=104  Identities=33%  Similarity=0.520  Sum_probs=85.3

Q ss_pred             hcCcccceeeeccCCccEEEEEec--CCc--EEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP--CGE--VIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~--~~~--~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+.+++.++||+|+||.|++|.+.  .|+  .||||+++..... ...+|++|+.+|-+|+|+|+++|+|+..+ .+.+|
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mM  187 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMM  187 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhH
Confidence            345667799999999999999953  344  6899999765443 66899999999999999999999999987 78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhhhcc
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY  569 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~~  569 (570)
                      |+|+++.|||.+.|++  .....+....+|+|
T Consensus       188 V~ELaplGSLldrLrk--a~~~~llv~~Lcdy  217 (1039)
T KOG0199|consen  188 VFELAPLGSLLDRLRK--AKKAILLVSRLCDY  217 (1039)
T ss_pred             HhhhcccchHHHHHhh--ccccceeHHHHHHH
Confidence            9999999999999998  33445555555554

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.24  E-value=1e-11  Score=125.79  Aligned_cols=97  Identities=28%  Similarity=0.518  Sum_probs=82.5

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEecC---C--cEEEEEEecC-CCcccHHHHHHHHHHHHccCCCCccceeEEEEeC
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLPC---G--EVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS  532 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~---~--~~vavK~l~~-~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~  532 (570)
                      .+..++.+.+.++||+|.||.||+|.+.+   |  -.||||..+. ..+...+.|+.|+.+|++++||||++|+|+|. .
T Consensus       384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e  462 (974)
T KOG4257|consen  384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-E  462 (974)
T ss_pred             ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-c
Confidence            45566778888999999999999999633   2  2589999874 55666788999999999999999999999996 5


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCCC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      .+.|||||+++.|.|.+||..++.
T Consensus       463 ~P~WivmEL~~~GELr~yLq~nk~  486 (974)
T KOG4257|consen  463 QPMWIVMELAPLGELREYLQQNKD  486 (974)
T ss_pred             cceeEEEecccchhHHHHHHhccc
Confidence            678999999999999999996543

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.24  E-value=2e-11  Score=118.29  Aligned_cols=93  Identities=23%  Similarity=0.393  Sum_probs=78.0

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc-------ccHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST-------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~-------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      .+.+.+.+.||+|+||.|-++. .++|+.||||.+.....       .......+|+++|++++|||||++.+.+..++.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            3456677999999999999998 67799999999953211       112235799999999999999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .|||+|||++|+|.+++-...
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk  271 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANK  271 (475)
T ss_pred             eEEEEEEecCccHHHHHHhcc
Confidence            999999999999999987544

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.23  E-value=3.5e-11  Score=122.39  Aligned_cols=90  Identities=29%  Similarity=0.420  Sum_probs=81.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|...++||+|+|+.||.++. ..|+.||+|+++..   ....++...+|+++.++|+|||||++++.+.+.+.+|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4588889999999999999995 88999999999642   3345567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhc
Q 008332          540 EYMPNKSLDCYLFG  553 (570)
Q Consensus       540 e~~~~GsL~~~L~~  553 (570)
                      |+|++|+|.++++.
T Consensus        98 ELC~~~sL~el~Kr  111 (592)
T KOG0575|consen   98 ELCHRGSLMELLKR  111 (592)
T ss_pred             EecCCccHHHHHHh
Confidence            99999999999983

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=2.4e-11  Score=120.64  Aligned_cols=95  Identities=28%  Similarity=0.428  Sum_probs=80.3

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv  538 (570)
                      +.|...+.||+|.||.||+++ ..+|+.||+|+++-..  .....-..+|+.+|++|+||||++|.+.....  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            446777899999999999999 7789999999997433  34445678999999999999999999999887  689999


Q ss_pred             EecCCCCCHHHHHhcCCCCcc
Q 008332          539 YEYMPNKSLDCYLFGLSHQKT  559 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~  559 (570)
                      +|||++ ||..+|....-.+.
T Consensus       197 FeYMdh-DL~GLl~~p~vkft  216 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSPGVKFT  216 (560)
T ss_pred             Eecccc-hhhhhhcCCCcccC
Confidence            999998 99999987654443

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=1.4e-12  Score=120.09  Aligned_cols=103  Identities=23%  Similarity=0.381  Sum_probs=84.2

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecC--CCcccHHHHHHHHHHHHccCCCCccceeE-EEEeCCe-eEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHVNLIRVLG-FCIDSEE-RMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~--~~~~~~~~f~~e~~~l~~l~h~niv~l~g-~~~~~~~-~~lv  538 (570)
                      .+|++.++||+|+||.||++. +.+|..+|.|.++-  .+...++....|+.+|++++|||||+.++ .+....+ +.||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            457778999999999999998 77899999999862  33445678999999999999999999998 4555555 8899


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      ||||..|+|...+..-+.....++...+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~V  126 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTV  126 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHH
Confidence            9999999999999866655655555443

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.16  E-value=9.6e-11  Score=114.08  Aligned_cols=88  Identities=39%  Similarity=0.683  Sum_probs=73.9

Q ss_pred             ccceeeeccCCccEEEEEec-----CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          467 SIRNKLGEGGYGPVYKGVLP-----CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~~-----~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++.+.||.|.||.||+|.+.     .+..|+||.+... .....+.|.+|+..+.+++||||++++|+|...++.++|+|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            35689999999999999976     2468999999643 33346789999999999999999999999998888999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|+..
T Consensus        82 ~~~~g~L~~~L~~~   95 (259)
T PF07714_consen   82 YCPGGSLDDYLKSK   95 (259)
T ss_dssp             --TTEBHHHHHHHT
T ss_pred             cccccccccccccc
Confidence            99999999999976

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.13  E-value=1.8e-10  Score=112.59  Aligned_cols=102  Identities=23%  Similarity=0.383  Sum_probs=82.6

Q ss_pred             hcCcccceeeeccCCccEEEEEec----CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..+|++.+.||+|+||.||+|...    .+..||+|.++... ......|.+|+.++.+++||||+++.|.+..+...++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            345788899999999999999842    35689999987543 2334579999999999999999999999998899999


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||||+++|+|.++|....   ..+++.+++
T Consensus        84 v~e~~~~~~L~~~l~~~~---~~l~~~~~~  110 (266)
T cd05064          84 VTEYMSNGALDSFLRKHE---GQLVAGQLM  110 (266)
T ss_pred             EEEeCCCCcHHHHHHhCC---CCCCHHHHH
Confidence            999999999999998643   234555443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.11  E-value=1.7e-10  Score=119.20  Aligned_cols=97  Identities=27%  Similarity=0.379  Sum_probs=81.2

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccC-CCCccceeEEEE
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCI  530 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~  530 (570)
                      +.....++.+.+.||+|+||.||+|...      .+..||||+++... ....+.|++|+.++.++. ||||++++++|.
T Consensus        32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~  111 (400)
T cd05105          32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT  111 (400)
T ss_pred             eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            3455678889999999999999999832      13469999996433 233467999999999995 999999999999


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .....+||||||++|+|.++|+..+
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~  136 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHKNR  136 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhh
Confidence            9899999999999999999998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.10  E-value=1.2e-10  Score=106.85  Aligned_cols=93  Identities=29%  Similarity=0.488  Sum_probs=78.3

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc-cc-HHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST-QG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~-~~-~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|...+.+|+|.||.||+|+ ..+|+.||||+++.... +. -...+||+..+++++|+||+.|+.++-..+.+.||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            45667899999999999999 67799999999964322 12 23578999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCCCc
Q 008332          542 MPNKSLDCYLFGLSHQK  558 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~  558 (570)
                      |+. +|...|+++..-.
T Consensus        83 m~t-dLe~vIkd~~i~l   98 (318)
T KOG0659|consen   83 MPT-DLEVVIKDKNIIL   98 (318)
T ss_pred             ccc-cHHHHhccccccc
Confidence            988 9999998754433

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.10  E-value=8.3e-11  Score=113.18  Aligned_cols=101  Identities=24%  Similarity=0.369  Sum_probs=83.7

Q ss_pred             ChHHHHHHhcCcccceeeeccCCccEEEEE------ecCCcEEEEEEecC-CCcccHHHHHHHHHHHHccCCCCccceeE
Q 008332          455 SLADIEAATERFSIRNKLGEGGYGPVYKGV------LPCGEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLG  527 (570)
Q Consensus       455 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~------~~~~~~vavK~l~~-~~~~~~~~f~~e~~~l~~l~h~niv~l~g  527 (570)
                      ...++...++++++..++.+|.||.||+|.      +++.+.|-||.++. ++.-....|+.|...+..+.|||+.++.+
T Consensus       275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            455667777889999999999999999995      34456788888863 44445678999999999999999999999


Q ss_pred             EEEeC-CeeEEEEecCCCCCHHHHHhcCC
Q 008332          528 FCIDS-EERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       528 ~~~~~-~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++... +..++++.++.-|+|+.||...|
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr  383 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICR  383 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhc
Confidence            99876 56899999999999999999443

>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis]

Probab=99.09  E-value=3e-08  Score=94.52  Aligned_cols=142  Identities=13%  Similarity=0.106  Sum_probs=86.0

Q ss_pred             hCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHH----------cCCCceeeeccCCCCCCCccchhhh
Q 008332           86 KNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARL----------YGFRGLDFAWTAPNTSTDMFNIGLL  155 (570)
Q Consensus        86 ~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~----------~~~DGidiDwE~p~~~~~~~~~~~l  155 (570)
                      +..|+|||+++||+.+.      ..+.+.+.-+.|++.+-+..-.          -=+||+|||.|.-    ....|.+|
T Consensus       100 QS~GiKVlLSLGG~~Gn------Ys~~~d~dA~~fA~~LWn~Fg~G~~S~RPfg~AVvDGfDF~IE~g----~~~~ysaL  169 (568)
T KOG4701|consen  100 QSNGIKVLLSLGGYNGN------YSLNNDDDATNFAFQLWNIFGSGEDSYRPFGKAVVDGFDFEIEKG----TNTAYSAL  169 (568)
T ss_pred             HhcCeEEEEeccCcccc------eeeccchhHHHHHHHHHHHhcCCccccCcccchhccceeeeeecC----CcchHHHH
Confidence            44589999999997652      2367778888999988765432          1289999999953    23578889


Q ss_pred             HHHHHHHHhhhhhcccccccceEEEEeecccCCCCCccChHHH-hhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC
Q 008332          156 FDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSI-QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR  234 (570)
Q Consensus       156 ~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~  234 (570)
                      -+.||..+..       + +..+.+++++.-.. .+..--..| .+..||+.++.|+..  .+....|           .
T Consensus       170 A~~L~~~Fa~-------~-~r~yYLsaAPQCP~-PD~~~G~aL~~~~fDf~~IQFYNN~--~CS~SsG-----------~  227 (568)
T KOG4701|consen  170 AKRLLEIFAS-------D-PRRYYLSAAPQCPV-PDHTLGKALSENSFDFLSIQFYNNS--TCSGSSG-----------S  227 (568)
T ss_pred             HHHHHHHHcc-------C-CceEEeccCCCCCC-CchhhhhhhhccccceEEEEeecCC--CcccccC-----------c
Confidence            9999988862       1 33344444332111 111111223 356899999999741  1111111           1


Q ss_pred             CccCHHHHHHHHHHcCCCCCc---eeeecc
Q 008332          235 FARSTDQVLKAWIERGLSADK---LVMCLP  261 (570)
Q Consensus       235 ~~~~v~~~v~~~~~~gvp~~K---lvlGip  261 (570)
                      .....|.-++|...  +.++|   +.||+|
T Consensus       228 ~Q~~fDsW~~ya~~--~a~nKn~~lFLGLP  255 (568)
T KOG4701|consen  228 RQSTFDAWVEYAED--SAYNKNTSLFLGLP  255 (568)
T ss_pred             ccccHHHHHHHHhh--hcccccceEEeecc
Confidence            12244444444332  67777   999999

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.08  E-value=2.4e-10  Score=114.61  Aligned_cols=94  Identities=23%  Similarity=0.359  Sum_probs=82.0

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..++|.++.+||+|+||.||.++ ..+|..+|+|+|++..-   ......+.|-.+|....+|+||+|+-.+.+.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            34678899999999999999999 56699999999975443   334567889999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      ||||+|||++..+|...+
T Consensus       219 iMEylPGGD~mTLL~~~~  236 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKD  236 (550)
T ss_pred             EEEecCCccHHHHHHhcC
Confidence            999999999999998643

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.08  E-value=5.2e-10  Score=111.69  Aligned_cols=91  Identities=32%  Similarity=0.529  Sum_probs=77.1

Q ss_pred             cCcccceeeeccCCccEEEEEecC-----------------CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccce
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC-----------------GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRV  525 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~-----------------~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l  525 (570)
                      .+|.+.+.||+|+||.||++..+.                 +..||+|.+.... ......|.+|+.++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            457778999999999999997432                 3369999986533 3335679999999999999999999


Q ss_pred             eEEEEeCCeeEEEEecCCCCCHHHHHhcC
Q 008332          526 LGFCIDSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       526 ~g~~~~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++.+...+..++||||+++|+|.++|...
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSH  113 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            99999989999999999999999999753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.08  E-value=1.8e-10  Score=118.45  Aligned_cols=97  Identities=26%  Similarity=0.400  Sum_probs=81.1

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      ....++|.+.+.||+|+||.||+|..      ..+..||||+++... ....+.+.+|+.++..+ +||||+++++.|..
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~  110 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV  110 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence            44456788889999999999999972      235589999996432 33446789999999999 89999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      ....++||||+++|+|.++|+..+.
T Consensus       111 ~~~~~lv~E~~~~g~L~~~l~~~~~  135 (375)
T cd05104         111 GGPTLVITEYCCYGDLLNFLRRKRD  135 (375)
T ss_pred             CCcceeeehhccCCcHHHHHHhccc
Confidence            9999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.08  E-value=7.3e-11  Score=106.60  Aligned_cols=92  Identities=32%  Similarity=0.454  Sum_probs=79.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|.+++.||+|.||.||.++. +++-.||+|++....   .+-..++.+|+++-+.++||||+++++.+.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            35688889999999999999994 556789999985321   12235789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      +||.++|+|...|.+.
T Consensus       101 lEya~~gel~k~L~~~  116 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEG  116 (281)
T ss_pred             EEecCCchHHHHHHhc
Confidence            9999999999999943

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.07  E-value=7.7e-11  Score=113.72  Aligned_cols=95  Identities=22%  Similarity=0.426  Sum_probs=82.1

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..++|.+.+.||+|.+|+|-++. -..|+.||||.++...-   +..-...+|+++|+.++||||++++.++...+-+.|
T Consensus        51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi  130 (668)
T KOG0611|consen   51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI  130 (668)
T ss_pred             hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence            45678888999999999999998 36699999999975433   334457899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcCCC
Q 008332          538 IYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~  556 (570)
                      ||||..+|.|.+|+.+++.
T Consensus       131 vMEYaS~GeLYDYiSer~~  149 (668)
T KOG0611|consen  131 VMEYASGGELYDYISERGS  149 (668)
T ss_pred             EEEecCCccHHHHHHHhcc
Confidence            9999999999999986543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.05  E-value=5e-10  Score=107.76  Aligned_cols=89  Identities=25%  Similarity=0.282  Sum_probs=77.7

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecC-CCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC-eeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~-~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e~~  542 (570)
                      +.....||+|..|.||++. ..+++.+|.|.+.. ..+...++..+|++++.+.+||+||.++|++.... .+.|+||||
T Consensus        81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM  160 (364)
T KOG0581|consen   81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM  160 (364)
T ss_pred             hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence            4445889999999999999 56688999999953 34455678999999999999999999999999998 599999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      .+|||++++...
T Consensus       161 DgGSLd~~~k~~  172 (364)
T KOG0581|consen  161 DGGSLDDILKRV  172 (364)
T ss_pred             CCCCHHHHHhhc
Confidence            999999999853

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.05  E-value=1.5e-10  Score=116.39  Aligned_cols=89  Identities=27%  Similarity=0.438  Sum_probs=77.4

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|.+.+.||+|+||.||||+ ..+.+.||+|.+.+...  .+.+...+|++++.+++||||+.++..+....++++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            356677899999999999999 45578999999965433  345679999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhc
Q 008332          541 YMPNKSLDCYLFG  553 (570)
Q Consensus       541 ~~~~GsL~~~L~~  553 (570)
                      |+.+ +|+.+|..
T Consensus        82 ~a~g-~L~~il~~   93 (808)
T KOG0597|consen   82 YAVG-DLFTILEQ   93 (808)
T ss_pred             hhhh-hHHHHHHh
Confidence            9977 99999975

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.05  E-value=3.3e-10  Score=117.06  Aligned_cols=97  Identities=25%  Similarity=0.404  Sum_probs=81.0

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccC-CCCccceeEEEE
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCI  530 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~  530 (570)
                      +....+++.+.+.||+|+||.||++..+      .+..||+|+++... ....+.+.+|+.++.++. ||||+++++.|.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            4455566888899999999999999853      24579999997432 233457899999999997 999999999999


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .....++|+||+++|+|.++|+..+
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~  136 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNK  136 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhcc
Confidence            9899999999999999999998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.04  E-value=1.2e-10  Score=108.55  Aligned_cols=89  Identities=24%  Similarity=0.367  Sum_probs=73.7

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcc--cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQ--GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~--~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .|...-.+|+|++|.|++|+ ..+|+.||||++......  -.+-.+||++++++++|+|+|.|+.+|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            35556789999999999999 677999999999654332  234578999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhc
Q 008332          542 MPNKSLDCYLFG  553 (570)
Q Consensus       542 ~~~GsL~~~L~~  553 (570)
                      |++--|+++=+.
T Consensus        83 ~dhTvL~eLe~~   94 (396)
T KOG0593|consen   83 CDHTVLHELERY   94 (396)
T ss_pred             cchHHHHHHHhc
Confidence            988656555443

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.04  E-value=3.7e-10  Score=114.57  Aligned_cols=95  Identities=22%  Similarity=0.436  Sum_probs=77.9

Q ss_pred             HHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeC
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS  532 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~  532 (570)
                      ...++|++.+.||+|+||.||++..      ..+..||+|.++... ......+.+|+.++.++ +||||+++++.|...
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP   83 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence            3456788889999999999999973      234679999986432 23346799999999999 899999999998765


Q ss_pred             C-eeEEEEecCCCCCHHHHHhcCC
Q 008332          533 E-ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~-~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      . ..+++|||+++|+|.++|+..+
T Consensus        84 ~~~~~lv~ey~~~g~L~~~l~~~~  107 (338)
T cd05102          84 NGPLMVIVEFCKYGNLSNFLRAKR  107 (338)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcc
Confidence            4 6889999999999999998654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.04  E-value=1.5e-10  Score=117.61  Aligned_cols=106  Identities=27%  Similarity=0.444  Sum_probs=90.3

Q ss_pred             cChHHHHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEe
Q 008332          454 YSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCID  531 (570)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~  531 (570)
                      .+.+++++..+.+.+.+.||+|+||+||+|.+. | .||||.+.-.  .+...+.|..|+.++++-+|.||+-+.|+|..
T Consensus       382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             ccccccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            345778888888999999999999999999987 3 5999999643  34456789999999999999999999999987


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCCCCccccc
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLSHQKTYFG  562 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~  562 (570)
                      ++. .||+.+|++-+|+.+||-.+..+++..
T Consensus       460 p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~  489 (678)
T KOG0193|consen  460 PPL-AIITQWCEGSSLYTHLHVQETKFDMNT  489 (678)
T ss_pred             Cce-eeeehhccCchhhhhccchhhhhhHHH
Confidence            776 999999999999999998765555443

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.04  E-value=7.5e-10  Score=113.56  Aligned_cols=90  Identities=22%  Similarity=0.314  Sum_probs=77.8

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|+..+.||+|+||.||++.. .+++.||||++....   ......+.+|+.++..++||||+++++.+..+...++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            577889999999999999994 468899999996321   2233567899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|...
T Consensus        82 ~~~~g~L~~~l~~~   95 (364)
T cd05599          82 YLPGGDMMTLLMKK   95 (364)
T ss_pred             CCCCcHHHHHHHHc
Confidence            99999999999753

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.03  E-value=5e-10  Score=109.01  Aligned_cols=103  Identities=26%  Similarity=0.419  Sum_probs=86.6

Q ss_pred             HhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +..+|++.+.||+|+||.||++....+..+++|.+..........+.+|+.++.+++|+||+++++.+......++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            34567788999999999999999777889999999765554566799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      +++|+|.+++++...  ..+++.++
T Consensus        84 ~~~~~L~~~~~~~~~--~~~~~~~~  106 (261)
T cd05148          84 MEKGSLLAFLRSPEG--QVLPVASL  106 (261)
T ss_pred             cccCCHHHHHhcCCC--CCCCHHHH
Confidence            999999999986432  23444443

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PHA02988 hypothetical protein; Provisional

Probab=99.03  E-value=1.3e-09  Score=107.70  Aligned_cols=84  Identities=21%  Similarity=0.334  Sum_probs=72.4

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCCccc---HHHHHHHHHHHHccCCCCccceeEEEEe----CCeeEEEEecC
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQG---FEEFKNEVMLTAKLQHVNLIRVLGFCID----SEERMLIYEYM  542 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~---~~~f~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv~e~~  542 (570)
                      ..+|+|++|.||+|.+. |+.||||.++......   .+.|.+|+.+|.+++||||++++|++..    ....++||||+
T Consensus        26 ~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            67999999999999985 8899999996543322   4678899999999999999999999877    34678999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.++|++.
T Consensus       105 ~~g~L~~~l~~~  116 (283)
T PHA02988        105 TRGYLREVLDKE  116 (283)
T ss_pred             CCCcHHHHHhhC
Confidence            999999999864

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.02  E-value=1.3e-09  Score=105.78  Aligned_cols=91  Identities=25%  Similarity=0.436  Sum_probs=78.6

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      ..|+..+.||+|+||.||++....+..+|+|.+.... .....|..|+.++.+++||||+++++.+......+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            3467778999999999999998777789999885332 234678999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCC
Q 008332          544 NKSLDCYLFGLS  555 (570)
Q Consensus       544 ~GsL~~~L~~~~  555 (570)
                      +|+|.++++...
T Consensus        83 ~~~L~~~~~~~~   94 (256)
T cd05114          83 NGCLLNYLRQRQ   94 (256)
T ss_pred             CCcHHHHHHhCc
Confidence            999999998643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.02  E-value=6.5e-10  Score=106.94  Aligned_cols=94  Identities=21%  Similarity=0.347  Sum_probs=81.5

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..++|++.++||+|+||+|+..+ .++++..|+|++++..   ....+...+|..+|.+++||.||+|.-.+.+.+.+|+
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            34678999999999999999999 5668899999996432   2334567899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      |+||+.||.|...|.+++
T Consensus       103 Vld~~~GGeLf~hL~~eg  120 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQREG  120 (357)
T ss_pred             EEeccCCccHHHHHHhcC
Confidence            999999999999998543

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.01  E-value=1.7e-09  Score=105.66  Aligned_cols=101  Identities=30%  Similarity=0.430  Sum_probs=82.2

Q ss_pred             cCcccceeeeccCCccEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++|+..+.||+|+||.||+|....    ...|++|.++... ......|.+|+.++.+++||||+++.+.+......+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            457888999999999999998532    3579999986433 33346799999999999999999999999988999999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |||+++|+|.+++.....   .+++.+++
T Consensus        84 ~e~~~~~~L~~~~~~~~~---~~~~~~~~  109 (266)
T cd05033          84 TEYMENGSLDKFLRENDG---KFTVGQLV  109 (266)
T ss_pred             EEcCCCCCHHHHHHhccC---CCCHHHHH
Confidence            999999999999986433   44554443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=1.3e-09  Score=107.07  Aligned_cols=93  Identities=18%  Similarity=0.344  Sum_probs=82.2

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEec-CCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~-~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ....|++.++||.|.-+.||++. ...+..||||++. .......+..++|+..|+.++||||++....+..+..+|+||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            34678899999999999999999 5668999999996 333444788999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      +||..||+.+.++..
T Consensus       104 pfMa~GS~ldIik~~  118 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTY  118 (516)
T ss_pred             hhhcCCcHHHHHHHH
Confidence            999999999998843

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.00  E-value=1.6e-09  Score=105.57  Aligned_cols=103  Identities=27%  Similarity=0.392  Sum_probs=85.2

Q ss_pred             HhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .+++|+..+.||+|++|.||++....++.||+|.++... ...++|.+|+.++.+++|||++++.+.+...+..++++||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            345688889999999999999997777889999986433 2356799999999999999999999999988999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +++|+|.+++....  ...+++.+++
T Consensus        83 ~~~~~L~~~~~~~~--~~~~~~~~~~  106 (261)
T cd05068          83 MKYGSLLEYLQGGA--GRALKLPQLI  106 (261)
T ss_pred             ccCCcHHHHHhccC--CCCCCHHHHH
Confidence            99999999998643  2334554443

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.00  E-value=5.9e-10  Score=118.44  Aligned_cols=108  Identities=19%  Similarity=0.318  Sum_probs=89.3

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCC-cEEEEEEecCCCcccHHHHHHHHHHHHccC-CCCccceeEEEE-eC----
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCG-EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCI-DS----  532 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~-~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~-~~----  532 (570)
                      .+...++++.+.|.+|+|+.||.+....+ ..+|+|++-..+....+...+|+.+|++|+ |+|||.+++... ..    
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~  112 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN  112 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence            45567788999999999999999997655 899999987667777788999999999995 999999999422 11    


Q ss_pred             --CeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhhcc
Q 008332          533 --EERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY  569 (570)
Q Consensus       533 --~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~~  569 (570)
                        -+++|+||||++|+|-+|+..+....  ++..++|+|
T Consensus       113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~--lte~eVLkI  149 (738)
T KOG1989|consen  113 GVWEVLLLMEYCKGGSLVDFMNTRLQTR--LTEDEVLKI  149 (738)
T ss_pred             ceeEEEeehhhccCCcHHHHHHHHHhcc--CChHHHHHH
Confidence              26789999999999999998654333  888888876

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.00  E-value=2.5e-10  Score=118.15  Aligned_cols=89  Identities=28%  Similarity=0.461  Sum_probs=76.2

Q ss_pred             ccceeeeccCCccEEEEE-ecCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC------eeEEE
Q 008332          467 SIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------ERMLI  538 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------~~~lv  538 (570)
                      ...+.||+|+||.||+|+ ...|+.||||.++.. ....++.+.+|+++|++++|+|||+++++-....      ...++
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence            345889999999999999 778999999999753 3455678999999999999999999998865543      56899


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      ||||++|||+..|.++.
T Consensus        96 mEyC~gGsL~~~L~~PE  112 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPE  112 (732)
T ss_pred             EeecCCCcHHHHhcCcc
Confidence            99999999999998754

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.99  E-value=1.9e-09  Score=109.07  Aligned_cols=90  Identities=27%  Similarity=0.429  Sum_probs=77.9

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|++.+.||+|+||.||++.. .+++.||+|++....   ......+.+|+.++..++||||+++++.+......++|||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            577889999999999999995 458899999986322   2234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus        82 ~~~g~~L~~~l~~~   95 (333)
T cd05600          82 YVPGGDFRTLLNNL   95 (333)
T ss_pred             CCCCCCHHHHHHHc
Confidence            99999999999753

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.99  E-value=1.8e-09  Score=111.37  Aligned_cols=90  Identities=19%  Similarity=0.310  Sum_probs=77.8

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .|...+.||+|+||.||++. ..+++.+|+|++....   ......+.+|+.++.+++||||+++++.+...+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            46778999999999999998 4567899999996432   2334568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|...
T Consensus        82 ~~~gg~L~~~l~~~   95 (381)
T cd05626          82 YIPGGDMMSLLIRM   95 (381)
T ss_pred             cCCCCcHHHHHHhc
Confidence            99999999999754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.99  E-value=1.7e-09  Score=109.51  Aligned_cols=92  Identities=22%  Similarity=0.236  Sum_probs=79.3

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .++|+..+.||+|+||.||++.. .++..+|+|.+... .......+.+|+.++.+++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            35688889999999999999995 45788999988643 22334578999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|...
T Consensus        84 ~~~~~~L~~~l~~~   97 (333)
T cd06650          84 HMDGGSLDQVLKKA   97 (333)
T ss_pred             cCCCCcHHHHHHHc
Confidence            99999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.98  E-value=2.3e-09  Score=108.37  Aligned_cols=93  Identities=22%  Similarity=0.207  Sum_probs=79.9

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .++|+..+.||+|+||.||++.. ..+..+|+|.+... .......+.+|+.++.+++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            35688889999999999999994 45788999998643 22334679999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcCC
Q 008332          541 YMPNKSLDCYLFGLS  555 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~  555 (570)
                      |+++|+|.+++....
T Consensus        84 ~~~~~~L~~~l~~~~   98 (331)
T cd06649          84 HMDGGSLDQVLKEAK   98 (331)
T ss_pred             cCCCCcHHHHHHHcC
Confidence            999999999997643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.98  E-value=2.1e-09  Score=114.16  Aligned_cols=100  Identities=12%  Similarity=0.116  Sum_probs=80.8

Q ss_pred             CcccceeeeccCCccEEEEEe-cC-CcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~-~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .|.+.+.||+|+||.||++.. .+ ++.|++|.+..........+.+|+.++..++||||+++++.+...+..+|||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            378889999999999999983 33 5678888775444444456888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCcccccHh
Q 008332          543 PNKSLDCYLFGLSHQKTYFGLE  564 (570)
Q Consensus       543 ~~GsL~~~L~~~~~~~~~~~~~  564 (570)
                      ++|+|.++|+.......+++..
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~  169 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEY  169 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHH
Confidence            9999999987543333344443

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.98  E-value=1.4e-09  Score=105.88  Aligned_cols=91  Identities=31%  Similarity=0.437  Sum_probs=79.9

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .++|++.+.||+|+||.||++...++..+++|.+.... ...+.+.+|+.++.+++|+||+++.+.+......++++||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            45688889999999999999998778889999885432 23567999999999999999999999998888999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.++++..
T Consensus        84 ~~~~L~~~l~~~   95 (261)
T cd05072          84 AKGSLLDFLKSD   95 (261)
T ss_pred             CCCcHHHHHHHh
Confidence            999999999754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=2e-09  Score=110.95  Aligned_cols=90  Identities=22%  Similarity=0.295  Sum_probs=77.5

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|.+.+.||+|+||.||++. ..+++.||+|.+....   ....+.+.+|+.++.+++||||+++++.+......++|||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            57778999999999999998 4568899999985321   2234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|...
T Consensus        82 ~~~gg~L~~~l~~~   95 (377)
T cd05629          82 FLPGGDLMTMLIKY   95 (377)
T ss_pred             CCCCCcHHHHHHhc
Confidence            99999999999753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.97  E-value=2.4e-09  Score=108.11  Aligned_cols=91  Identities=21%  Similarity=0.292  Sum_probs=78.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|.+.+.||+|+||.||++.. .+++.+|+|.+...   .....+.+.+|+.++.+++||||+++++.+...+..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            4578889999999999999995 45889999998632   1233457889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|.+.
T Consensus        98 e~~~~~~L~~~l~~~  112 (329)
T PTZ00263         98 EFVVGGELFTHLRKA  112 (329)
T ss_pred             cCCCCChHHHHHHHc
Confidence            999999999999864

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.97  E-value=3.3e-09  Score=107.57  Aligned_cols=91  Identities=19%  Similarity=0.274  Sum_probs=77.1

Q ss_pred             cCcccceeeeccCCccEEEEEecC--CcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC--GEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~--~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++|+..+.||+|+||.||++....  +..||+|.+...   .....+.+.+|+.++..++||||+++++++......++|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            457888999999999999998432  358999998532   223345788999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.++|...
T Consensus       110 ~Ey~~~g~L~~~i~~~  125 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRN  125 (340)
T ss_pred             EeCCCCCcHHHHHHHc
Confidence            9999999999999864

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.97  E-value=2.6e-09  Score=103.95  Aligned_cols=104  Identities=27%  Similarity=0.416  Sum_probs=85.5

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ...++|.+.+.||+|+||.||++....++.+++|.+.... ...+.+.+|+.++.+++|+|++++++.+......++++|
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            3456788889999999999999997777889999986433 345679999999999999999999999988889999999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |+++|+|.+++.+...  ..+++.+++
T Consensus        82 ~~~~~~L~~~i~~~~~--~~~~~~~~~  106 (261)
T cd05034          82 YMSKGSLLDFLKSGEG--KKLRLPQLV  106 (261)
T ss_pred             ccCCCCHHHHHhcccc--CCCCHHHHH
Confidence            9999999999986432  234444443

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.96  E-value=3.6e-09  Score=103.26  Aligned_cols=104  Identities=25%  Similarity=0.378  Sum_probs=85.3

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|+..+.||+|+||.||++... +++.+++|.++..   .....+.+.+|+.++.+++|+|++++++.+...+..++++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            46778899999999999999954 7899999988532   2233567999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          540 EYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||+++|+|.+++.........++..+++
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~  109 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIW  109 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHH
Confidence            9999999999997654444445555544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.96  E-value=2.3e-09  Score=110.75  Aligned_cols=90  Identities=20%  Similarity=0.297  Sum_probs=77.6

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .|...+.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.++.+++||||+++++.+......++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            467789999999999999984 568899999986422   2234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      ||++|+|.++|...
T Consensus        82 ~~~gg~L~~~l~~~   95 (382)
T cd05625          82 YIPGGDMMSLLIRM   95 (382)
T ss_pred             CCCCCcHHHHHHhc
Confidence            99999999999754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.96  E-value=2.9e-09  Score=109.17  Aligned_cols=90  Identities=20%  Similarity=0.290  Sum_probs=77.4

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|+..+.||+|+||.||++.. .+++.+|+|+++...   ......+.+|+.++.+++|+||+++++.+......++|||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            577789999999999999984 558899999986422   2233567889999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|...
T Consensus        82 ~~~gg~L~~~l~~~   95 (363)
T cd05628          82 FLPGGDMMTLLMKK   95 (363)
T ss_pred             CCCCCcHHHHHHhc
Confidence            99999999999854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.96  E-value=2.8e-09  Score=103.48  Aligned_cols=100  Identities=26%  Similarity=0.395  Sum_probs=81.9

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      .+|...+.||+|+||.||.+....+..+|+|.+.... .....|.+|+.++.+++||||+++++++......+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            3467778999999999999987766679999986432 234679999999999999999999999988888999999999


Q ss_pred             CCCHHHHHhcCCCCcccccHhhhh
Q 008332          544 NKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       544 ~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +|+|.+++.....   .+++.+++
T Consensus        83 ~~~l~~~i~~~~~---~~~~~~~~  103 (256)
T cd05113          83 NGCLLNYLREHGK---RFQPSQLL  103 (256)
T ss_pred             CCcHHHHHHhcCC---CCCHHHHH
Confidence            9999999986432   34544443

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.96  E-value=7.6e-10  Score=104.72  Aligned_cols=93  Identities=23%  Similarity=0.373  Sum_probs=75.4

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc-c-cHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST-Q-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLIY  539 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~-~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~  539 (570)
                      .|+..+.|++|.||.||+|. .++++.||.|+++-... . -.-.-+||+.++.+++|||||.+..+....  +..||||
T Consensus        77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM  156 (419)
T KOG0663|consen   77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM  156 (419)
T ss_pred             HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence            46667899999999999999 56788999999963221 1 112457999999999999999999888765  5799999


Q ss_pred             ecCCCCCHHHHHhcCCCCc
Q 008332          540 EYMPNKSLDCYLFGLSHQK  558 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~  558 (570)
                      |||++ +|...|..-++.+
T Consensus       157 e~~Eh-DLksl~d~m~q~F  174 (419)
T KOG0663|consen  157 EYVEH-DLKSLMETMKQPF  174 (419)
T ss_pred             HHHHh-hHHHHHHhccCCC
Confidence            99998 9999999765443

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.96  E-value=3.6e-09  Score=103.32  Aligned_cols=101  Identities=24%  Similarity=0.353  Sum_probs=81.6

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||++. ..+++.+|+|.+....   ......|.+|+.++++++|||++++++.+......++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            357788999999999999999 4568899999875322   233456899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCCCcccccHh
Q 008332          540 EYMPNKSLDCYLFGLSHQKTYFGLE  564 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~~~~~~~  564 (570)
                      ||+++|+|.+++.........++..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~  106 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPER  106 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHH
Confidence            9999999999987543333334433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.95  E-value=4.2e-09  Score=102.89  Aligned_cols=91  Identities=24%  Similarity=0.426  Sum_probs=79.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+|++.+.||+|+||.||++.. .+++.+++|.+..........+.+|+.++.+++||||+++.+.+...+..++|+||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            4577889999999999999994 568899999986444344456889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.++++..
T Consensus        89 ~~~~L~~~~~~~  100 (267)
T cd06646          89 GGGSLQDIYHVT  100 (267)
T ss_pred             CCCcHHHHHHhc
Confidence            999999999753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.95  E-value=4e-09  Score=105.52  Aligned_cols=90  Identities=22%  Similarity=0.213  Sum_probs=77.7

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|+..+.||+|+||.||++.. .++..+++|.+... .......+.+|+.++.+++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            577789999999999999984 45788999988643 2233456889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.++++..
T Consensus        82 ~~~~L~~~l~~~   93 (308)
T cd06615          82 DGGSLDQVLKKA   93 (308)
T ss_pred             CCCcHHHHHHhc
Confidence            999999999764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.95  E-value=2.7e-09  Score=104.32  Aligned_cols=95  Identities=26%  Similarity=0.364  Sum_probs=81.2

Q ss_pred             HHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +.++.++.....||+|+||.||++. .+++..|++|.+........+.+.+|+.++.+++|+||+++++.+...+..+++
T Consensus         4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   83 (268)
T cd06624           4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF   83 (268)
T ss_pred             ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence            3345555556789999999999999 455778999998755555566899999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      +||+++++|.++++..
T Consensus        84 ~e~~~~~~L~~~l~~~   99 (268)
T cd06624          84 MEQVPGGSLSALLRSK   99 (268)
T ss_pred             EecCCCCCHHHHHHHh
Confidence            9999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.95  E-value=3.4e-09  Score=109.20  Aligned_cols=90  Identities=19%  Similarity=0.289  Sum_probs=77.7

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|++.+.||+|+||.||++. ...++.+|+|.+....   ......+.+|+.++.+++|+||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            57788999999999999999 4558899999985321   2234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|.+.
T Consensus        82 ~~~~g~L~~~i~~~   95 (376)
T cd05598          82 YIPGGDMMSLLIRL   95 (376)
T ss_pred             CCCCCcHHHHHHhc
Confidence            99999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=98.95  E-value=4.5e-10  Score=112.95  Aligned_cols=87  Identities=30%  Similarity=0.384  Sum_probs=73.9

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++.+.+..++-||.|+-|.||+|+++ ++.||||+++....       .++.-|++|+|+||+.|.|+|....-.+||||
T Consensus       121 iPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtqsPcyCIiME  192 (904)
T KOG4721|consen  121 IPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQSPCYCIIME  192 (904)
T ss_pred             CCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence            33334455688999999999999998 78999999864432       46788999999999999999999888999999


Q ss_pred             cCCCCCHHHHHhcCC
Q 008332          541 YMPNKSLDCYLFGLS  555 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~  555 (570)
                      ||+.|.|.+.|+..+
T Consensus       193 fCa~GqL~~VLka~~  207 (904)
T KOG4721|consen  193 FCAQGQLYEVLKAGR  207 (904)
T ss_pred             ccccccHHHHHhccC
Confidence            999999999999654

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.95  E-value=2.1e-09  Score=105.51  Aligned_cols=84  Identities=24%  Similarity=0.400  Sum_probs=70.5

Q ss_pred             eeeccCCccEEEEEecC-------------------------CcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccce
Q 008332          471 KLGEGGYGPVYKGVLPC-------------------------GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV  525 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~~~-------------------------~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l  525 (570)
                      .||+|+||.||+|....                         ...|++|.+.........+|.+|+.++.+++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999997421                         12588998865444444678899999999999999999


Q ss_pred             eEEEEeCCeeEEEEecCCCCCHHHHHhcC
Q 008332          526 LGFCIDSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       526 ~g~~~~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      +++|......++||||+++|+|..++++.
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~  110 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE  110 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc
Confidence            99999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=1.7e-09  Score=107.17  Aligned_cols=91  Identities=20%  Similarity=0.212  Sum_probs=77.5

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|+..+.||+|+||.||++.. .+++.+|+|.+....   ....+.+.+|+.++.+++||||+++++.+......++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            567789999999999999995 468899999985322   1234568899999999999999999999988899999999


Q ss_pred             cCCCCCHHHHHhcCC
Q 008332          541 YMPNKSLDCYLFGLS  555 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~  555 (570)
                      |+++|+|.+++...+
T Consensus        82 ~~~~~~L~~~~~~~~   96 (291)
T cd05612          82 YVPGGELFSYLRNSG   96 (291)
T ss_pred             CCCCCCHHHHHHHcC
Confidence            999999999997643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.94  E-value=4e-09  Score=104.24  Aligned_cols=89  Identities=22%  Similarity=0.301  Sum_probs=75.8

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      |+..+.||+|+||.||++. ..+++.||+|.+....   ......+.+|+.++.+++|+|++++.+.+...+..++|+||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            5667899999999999998 4678999999985322   12234678999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        82 ~~~g~L~~~~~~~   94 (285)
T cd05631          82 MNGGDLKFHIYNM   94 (285)
T ss_pred             cCCCcHHHHHHhh
Confidence            9999999988653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.94  E-value=4.1e-09  Score=103.99  Aligned_cols=91  Identities=32%  Similarity=0.571  Sum_probs=77.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-----cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~  536 (570)
                      .+++..+.||+|+||.||++..     ..+..|++|.+........+.|.+|+.++.+++||||+++.+++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            3577789999999999999974     34778999998765555567899999999999999999999987654  4688


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +|+||+++|+|.+++.+.
T Consensus        84 lv~e~~~~~~L~~~l~~~  101 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH  101 (284)
T ss_pred             EEEEecCCCCHHHHHHhc
Confidence            999999999999999754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.94  E-value=4.2e-09  Score=102.94  Aligned_cols=101  Identities=27%  Similarity=0.413  Sum_probs=80.7

Q ss_pred             cCcccceeeeccCCccEEEEEec-C---CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-C---GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~---~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .+|++.+.||+|+||.||+|... .   +..+++|.++... ......|..|+.++.+++||||+++.+.+...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45777899999999999999842 2   3379999986432 23346799999999999999999999999988999999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |||+++|+|.+++.....   .+++.+++
T Consensus        84 ~e~~~~~~L~~~~~~~~~---~~~~~~~~  109 (267)
T cd05066          84 TEYMENGSLDAFLRKHDG---QFTVIQLV  109 (267)
T ss_pred             EEcCCCCCHHHHHHhcCC---CCCHHHHH
Confidence            999999999999986432   34444443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.94  E-value=3.3e-09  Score=104.57  Aligned_cols=97  Identities=23%  Similarity=0.368  Sum_probs=77.3

Q ss_pred             eeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          472 LGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       472 lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      ||+|+||.||++.. .+++.+|+|.+.....   ...+.+..|+.++.+++|+||+++.+++......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            69999999999984 5688999999853221   2235678899999999999999999999888999999999999999


Q ss_pred             HHHHhcCCCCcccccHhhhhc
Q 008332          548 DCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       548 ~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      ..++.........+++.+++.
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~  101 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACF  101 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHH
Confidence            999875444444455555443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.94  E-value=2.7e-09  Score=105.08  Aligned_cols=92  Identities=23%  Similarity=0.423  Sum_probs=80.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .++|++.+.||+|++|.||++.. .++..+++|.+........+.|.+|+.++.+++|||++++++.+..+...++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            34577888999999999999995 45789999998655555556899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++.+.
T Consensus        84 ~~~~~L~~~~~~~   96 (280)
T cd06611          84 CDGGALDSIMLEL   96 (280)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.94  E-value=2.9e-09  Score=104.75  Aligned_cols=91  Identities=29%  Similarity=0.618  Sum_probs=78.3

Q ss_pred             cCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      .+|.+.+.||+|+||.||+|...      .+..+|+|.+...... ..+.|.+|+.++.+++|+|++++.+.+......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            45677799999999999999853      2468999998654333 4568999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      ++|||+++|+|.++|+..
T Consensus        85 lv~e~~~~~~L~~~i~~~  102 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSH  102 (280)
T ss_pred             EEEecCCCCCHHHHHHhc
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.94  E-value=2.4e-09  Score=108.54  Aligned_cols=93  Identities=23%  Similarity=0.360  Sum_probs=81.1

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~  536 (570)
                      ....|.+.+.||+|.||.||++.. .+|+.+|+|.+.....   .......+|+.+|.++. |||||.+.+.+......+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            345678889999999999999994 5599999999964333   24467899999999998 999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +|||++.+|.|.+.|...
T Consensus       113 lvmEL~~GGeLfd~i~~~  130 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK  130 (382)
T ss_pred             EEEEecCCchHHHHHHHc
Confidence            999999999999999875

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=2.2e-10  Score=113.20  Aligned_cols=98  Identities=29%  Similarity=0.469  Sum_probs=80.1

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHH--HHHHHHHHHccC-CCCccceeEEEEeCC-eeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE--FKNEVMLTAKLQ-HVNLIRVLGFCIDSE-ERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~--f~~e~~~l~~l~-h~niv~l~g~~~~~~-~~~l  537 (570)
                      .++|...+.||.|.||.||++. ...+..||||+++..-. ..++  =+||+..+.+++ ||||++|..+..+.+ .+++
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            4568888999999999999999 67789999999964322 1233  469999999998 999999999999887 8999


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhh
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      |||||+. +|.++++++   ...++..+
T Consensus        88 VfE~Md~-NLYqLmK~R---~r~fse~~  111 (538)
T KOG0661|consen   88 VFEFMDC-NLYQLMKDR---NRLFSESD  111 (538)
T ss_pred             eHHhhhh-hHHHHHhhc---CCcCCHHH
Confidence            9999976 999999975   33445443

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.93  E-value=1.3e-09  Score=112.08  Aligned_cols=96  Identities=26%  Similarity=0.386  Sum_probs=79.5

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      ....++|++.+.||+|+||.||++..      .++..||+|.++... ......+.+|+.++..+ +|+||+++++.|..
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~  113 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH  113 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence            34455788889999999999999872      223579999996433 23345688999999999 89999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ....++||||+++|+|.++|+...
T Consensus       114 ~~~~~lv~ey~~~g~L~~~l~~~~  137 (374)
T cd05106         114 GGPVLVITEYCCYGDLLNFLRKKA  137 (374)
T ss_pred             CCCeEEeHhhccCCcHHHHHHhhh
Confidence            999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.93  E-value=3.8e-09  Score=102.77  Aligned_cols=102  Identities=30%  Similarity=0.408  Sum_probs=82.2

Q ss_pred             HhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ..++|++.+.||+|+||.||++...+++.+|+|.+.... .....|.+|+.++.+++|+|++++.+.. ..+..++++||
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~   81 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY   81 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence            445678889999999999999998788999999986433 2346799999999999999999999876 45678999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +++|+|.+++.....  ..+++.+.+
T Consensus        82 ~~~~~L~~~~~~~~~--~~~~~~~~~  105 (260)
T cd05067          82 MENGSLVDFLKTPEG--IKLTINKLI  105 (260)
T ss_pred             CCCCCHHHHHHhcCC--CCCCHHHHH
Confidence            999999999976432  234444433

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=4.3e-09  Score=104.04  Aligned_cols=89  Identities=22%  Similarity=0.320  Sum_probs=75.4

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      |+..+.||+|+||.||++.. .+++.||+|.+.....   .....+.+|+.++.+++||||+++.+.+..++..++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            56678999999999999984 4688999999854221   2234578899999999999999999999988999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        82 ~~~~~L~~~~~~~   94 (285)
T cd05605          82 MNGGDLKFHIYNM   94 (285)
T ss_pred             cCCCcHHHHHHhc
Confidence            9999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.93  E-value=4e-09  Score=106.23  Aligned_cols=85  Identities=20%  Similarity=0.158  Sum_probs=72.9

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      +.||+|+||.||++.. .+|+.||+|.++..   .......+.+|+.++.+++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4689999999999984 56889999998642   2233456788999999999999999999999999999999999999


Q ss_pred             CHHHHHhcC
Q 008332          546 SLDCYLFGL  554 (570)
Q Consensus       546 sL~~~L~~~  554 (570)
                      +|..++...
T Consensus        81 ~L~~~l~~~   89 (323)
T cd05595          81 ELFFHLSRE   89 (323)
T ss_pred             cHHHHHHHc
Confidence            999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.92  E-value=2.4e-09  Score=104.49  Aligned_cols=91  Identities=27%  Similarity=0.457  Sum_probs=75.9

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC--eeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE--ERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv~e~  541 (570)
                      +....+.||+|+||.||.+.. ++|...|||.+........+.+.+|+.+|.+++|||||+..|.....+  .+++.|||
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy   97 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY   97 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence            456678999999999999995 448999999986443222567899999999999999999999855554  68999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      +++|+|.+++.+..
T Consensus        98 ~~~GsL~~~~~~~g  111 (313)
T KOG0198|consen   98 APGGSLSDLIKRYG  111 (313)
T ss_pred             cCCCcHHHHHHHcC
Confidence            99999999999754

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.92  E-value=1.7e-09  Score=105.28  Aligned_cols=98  Identities=22%  Similarity=0.274  Sum_probs=81.2

Q ss_pred             hcCcccceeeeccCCccEEEEEecC-CcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|++.+.||.|.-|.||.+++.. +...|+|++.+...   ......+.|.++|+.++||.++.|++.+......+++
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~  155 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV  155 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence            3457778999999999999999753 57899999964332   3334677889999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcCCCCccccc
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFG  562 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~  562 (570)
                      ||||+||+|+.+++++  ...+++
T Consensus       156 meyCpGGdL~~LrqkQ--p~~~fs  177 (459)
T KOG0610|consen  156 MEYCPGGDLHSLRQKQ--PGKRFS  177 (459)
T ss_pred             EecCCCccHHHHHhhC--CCCccc
Confidence            9999999999998863  444555

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.92  E-value=4.3e-09  Score=104.14  Aligned_cols=93  Identities=26%  Similarity=0.559  Sum_probs=79.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      .++|.+.+.||+|+||.||++..      .++..+++|.+........+.+.+|+.++.+++||||+++.+.+......+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            35678889999999999999974      124468999987655555667999999999999999999999999989999


Q ss_pred             EEEecCCCCCHHHHHhcCC
Q 008332          537 LIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~  555 (570)
                      +++||+++|+|.++|+...
T Consensus        84 lv~e~~~~~~L~~~i~~~~  102 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHG  102 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcC
Confidence            9999999999999998543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.92  E-value=5.8e-09  Score=101.23  Aligned_cols=100  Identities=28%  Similarity=0.462  Sum_probs=83.2

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      .+++..+.||+|+||.||++... ++.|++|.+..... ..+.+.+|+.++.+++|+|++++++.+......++|+||++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            45777899999999999999866 88999999965433 45689999999999999999999999988889999999999


Q ss_pred             CCCHHHHHhcCCCCcccccHhhhh
Q 008332          544 NKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       544 ~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +|+|.+++.....  ..+++.+++
T Consensus        84 ~~~L~~~~~~~~~--~~~~~~~~~  105 (256)
T cd05039          84 KGSLVDYLRSRGR--AVITLAQQL  105 (256)
T ss_pred             CCcHHHHHHhcCC--CCCCHHHHH
Confidence            9999999986432  234444444

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.92  E-value=5.3e-09  Score=105.72  Aligned_cols=89  Identities=21%  Similarity=0.229  Sum_probs=76.9

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|++.+.||+|+||.||++.. .+++.+|+|.+...   .....+.|.+|..++..++|+||+++.+++......++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            577889999999999999994 55889999998532   22234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhc
Q 008332          541 YMPNKSLDCYLFG  553 (570)
Q Consensus       541 ~~~~GsL~~~L~~  553 (570)
                      |+++|+|.+++.+
T Consensus        82 ~~~g~~L~~~l~~   94 (331)
T cd05597          82 YYVGGDLLTLLSK   94 (331)
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999999975

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.91  E-value=5.3e-09  Score=105.36  Aligned_cols=85  Identities=20%  Similarity=0.158  Sum_probs=73.1

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      ++||+|+||.||++.. .+++.+|+|.++..   .......+.+|+.++.+++||||+++.+.+......++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999984 56889999998642   2233456889999999999999999999999999999999999999


Q ss_pred             CHHHHHhcC
Q 008332          546 SLDCYLFGL  554 (570)
Q Consensus       546 sL~~~L~~~  554 (570)
                      +|.+++...
T Consensus        81 ~L~~~l~~~   89 (323)
T cd05571          81 ELFFHLSRE   89 (323)
T ss_pred             cHHHHHHHc
Confidence            999999754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.91  E-value=3.9e-09  Score=103.79  Aligned_cols=94  Identities=27%  Similarity=0.507  Sum_probs=78.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      ..++|++.+.||+|+||.||++...      .+..+|+|.+.... .....+|.+|+.++.+++||||+++++.+.....
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4456888899999999999998742      24579999985432 2334578999999999999999999999988889


Q ss_pred             eEEEEecCCCCCHHHHHhcCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .++|+||+++|+|.+++++.+
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~  104 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLR  104 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcC
Confidence            999999999999999998643

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.91  E-value=5e-09  Score=102.85  Aligned_cols=92  Identities=29%  Similarity=0.486  Sum_probs=77.9

Q ss_pred             cCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      .+|+....||+|+||.||++...      ..+.+++|.+...... ..+.|.+|+.++.+++|+||+++++.+......+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            46778899999999999999843      2457999988643333 3567999999999999999999999998888999


Q ss_pred             EEEecCCCCCHHHHHhcCC
Q 008332          537 LIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~  555 (570)
                      +|+||+++|+|.+++...+
T Consensus        85 lv~e~~~~~~L~~~i~~~~  103 (275)
T cd05046          85 MILEYTDLGDLKQFLRATK  103 (275)
T ss_pred             EEEEecCCCcHHHHHHhcc
Confidence            9999999999999998654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.90  E-value=6.4e-09  Score=102.59  Aligned_cols=91  Identities=29%  Similarity=0.554  Sum_probs=77.1

Q ss_pred             cCcccceeeeccCCccEEEEEe-----cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|++.+.||+|+||.||+|..     ..+..+++|.+.... ......|.+|+.++.+++||||+++++.+......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4577789999999999999983     235689999986433 3334678999999999999999999999998899999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      +|||+++|+|.+++...
T Consensus        85 v~e~~~~~~L~~~l~~~  101 (283)
T cd05090          85 LFEYLNQGDLHEFLIMR  101 (283)
T ss_pred             EEEcCCCCcHHHHHHhc
Confidence            99999999999999743

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.90  E-value=4.2e-09  Score=104.22  Aligned_cols=94  Identities=26%  Similarity=0.481  Sum_probs=78.1

Q ss_pred             HHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCC
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE  533 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~  533 (570)
                      ...++|++.+.||+|+||.||+|...      .+..||+|.+.... ......+.+|+.++..++||||+++++.+....
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            34567888899999999999999742      24479999886332 223346889999999999999999999999888


Q ss_pred             eeEEEEecCCCCCHHHHHhcC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..++||||+++|+|.+++++.
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~  103 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSL  103 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHh
Confidence            999999999999999999853

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.90  E-value=6.7e-09  Score=100.35  Aligned_cols=86  Identities=23%  Similarity=0.448  Sum_probs=74.6

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCHH
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD  548 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL~  548 (570)
                      ++||+|+||.||++...++..+|+|.+..... .....|.+|+.++.+++||||+++.+.+......++||||+++|+|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36899999999999987788999999865433 23346899999999999999999999999889999999999999999


Q ss_pred             HHHhcCC
Q 008332          549 CYLFGLS  555 (570)
Q Consensus       549 ~~L~~~~  555 (570)
                      +++....
T Consensus        81 ~~~~~~~   87 (250)
T cd05085          81 SFLRKKK   87 (250)
T ss_pred             HHHHhcC
Confidence            9997543

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.90  E-value=5.4e-09  Score=106.02  Aligned_cols=92  Identities=24%  Similarity=0.420  Sum_probs=77.9

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC----Cc-ccHHHHHHHHHHHHccC-CCCccceeEEEEeCCe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT----ST-QGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEE  534 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~----~~-~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~  534 (570)
                      ...++.+.+.||+|.||.|+.+. ..++..||+|.+...    .. ...+...+|+.++..++ ||||+++..+......
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            34568888999999999999998 566899999976532    11 12234558999999998 9999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhc
Q 008332          535 RMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~  553 (570)
                      .++||||+.+|+|.+++.+
T Consensus        95 ~~ivmEy~~gGdL~~~i~~  113 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVN  113 (370)
T ss_pred             EEEEEEecCCccHHHHHHH
Confidence            9999999999999999997

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.90  E-value=4e-09  Score=103.00  Aligned_cols=101  Identities=24%  Similarity=0.361  Sum_probs=81.9

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|++.+.||+|+||.||++. ..++..++||.+....   ......|.+|+.++..++|+||+++++.+......++++|
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            56777899999999999999 4578899999885422   2234578999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccHhh
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      |+++++|.+++.........+++.+
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~  107 (267)
T cd08229          83 LADAGDLSRMIKHFKKQKRLIPEKT  107 (267)
T ss_pred             ecCCCCHHHHHHHhhccCCCCCHHH
Confidence            9999999999975333333445444

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.90  E-value=5.7e-09  Score=102.12  Aligned_cols=85  Identities=29%  Similarity=0.470  Sum_probs=71.7

Q ss_pred             eeeccCCccEEEEEecC---CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          471 KLGEGGYGPVYKGVLPC---GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~~~---~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .||+|+||.||+|....   +..+++|.++... ......|.+|+.++.+++||||+++++.+......++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            58999999999998532   4579999886433 2334578899999999999999999999988889999999999999


Q ss_pred             HHHHHhcCC
Q 008332          547 LDCYLFGLS  555 (570)
Q Consensus       547 L~~~L~~~~  555 (570)
                      |.++|+..+
T Consensus        82 L~~~l~~~~   90 (269)
T cd05087          82 LKGYLRSCR   90 (269)
T ss_pred             HHHHHHHhh
Confidence            999998644

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.90  E-value=5.9e-09  Score=102.63  Aligned_cols=106  Identities=23%  Similarity=0.403  Sum_probs=83.7

Q ss_pred             HhcCcccceeeeccCCccEEEEEecC-----CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeC-Ce
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-EE  534 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~-----~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~~  534 (570)
                      ..++|.+.++||+|+||.||+|....     +..|++|.+.... ......+.+|+.++.+++|+|++++++.+... ..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            34668888999999999999999654     6789999986432 33356789999999999999999999988764 67


Q ss_pred             eEEEEecCCCCCHHHHHhcCCCCc----ccccHhhhh
Q 008332          535 RMLIYEYMPNKSLDCYLFGLSHQK----TYFGLEKTC  567 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~~~~----~~~~~~~~~  567 (570)
                      .++++||+++|+|.++|...+...    ..+++.+++
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~  120 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLV  120 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHH
Confidence            899999999999999998654321    345555444

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.89  E-value=5e-09  Score=107.49  Aligned_cols=93  Identities=22%  Similarity=0.253  Sum_probs=78.7

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..++|+..+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++..++||||+++++.+..+...++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            346688889999999999999995 45789999998532   12233458899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.+++...
T Consensus       121 v~Ey~~gg~L~~~l~~~  137 (370)
T cd05621         121 VMEYMPGGDLVNLMSNY  137 (370)
T ss_pred             EEcCCCCCcHHHHHHhc
Confidence            99999999999999753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.89  E-value=3e-09  Score=108.11  Aligned_cols=94  Identities=23%  Similarity=0.439  Sum_probs=77.1

Q ss_pred             HhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeC-
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS-  532 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~-  532 (570)
                      ..++|++.+.||+|+||.||+|..      ..++.||||.++... ......+.+|+.++.++ +||||+++++.|... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            345688889999999999999972      346789999996433 23345788999999999 789999999988755 


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ...++++||+++|+|.++|+..+
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~  107 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKR  107 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcC
Confidence            46789999999999999998654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.89  E-value=3.5e-09  Score=104.59  Aligned_cols=108  Identities=21%  Similarity=0.324  Sum_probs=82.9

Q ss_pred             hHHHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEe--
Q 008332          456 LADIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID--  531 (570)
Q Consensus       456 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~--  531 (570)
                      +..+....++|+..+.||+|+||.||++.. ..++.+++|.+.... .....+.+|+.++.++ +|||++++++.+..  
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            344556778889999999999999999984 557899999875422 2235688899999999 79999999998853  


Q ss_pred             ---CCeeEEEEecCCCCCHHHHHhcCCCCcccccHh
Q 008332          532 ---SEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLE  564 (570)
Q Consensus       532 ---~~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~  564 (570)
                         ....++||||+++|+|.++++........++..
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  124 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEP  124 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHH
Confidence               346899999999999999987543333334433

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.89  E-value=5.1e-09  Score=107.00  Aligned_cols=95  Identities=21%  Similarity=0.332  Sum_probs=81.8

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ...+.+...||+|.|+.|..+. ..++..||+|.+.+...  ...+.+.+|+++|..++|||||+|+++...+..+++||
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            3457788999999999999999 45689999999975433  33456889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCCC
Q 008332          540 EYMPNKSLDCYLFGLSHQ  557 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~  557 (570)
                      ||+.+|.+++||.+...-
T Consensus       135 eya~~ge~~~yl~~~gr~  152 (596)
T KOG0586|consen  135 EYASGGELFDYLVKHGRM  152 (596)
T ss_pred             EeccCchhHHHHHhcccc
Confidence            999999999999965443

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.89  E-value=7.4e-09  Score=104.51  Aligned_cols=85  Identities=20%  Similarity=0.174  Sum_probs=73.1

Q ss_pred             eeeeccCCccEEEEE-ecCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          470 NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      +.||+|+||.||++. ..+++.+|+|.+...   .......+.+|+.++..++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            368999999999998 456889999998642   2233457889999999999999999999999999999999999999


Q ss_pred             CHHHHHhcC
Q 008332          546 SLDCYLFGL  554 (570)
Q Consensus       546 sL~~~L~~~  554 (570)
                      +|.+++...
T Consensus        81 ~L~~~l~~~   89 (328)
T cd05593          81 ELFFHLSRE   89 (328)
T ss_pred             CHHHHHHhc
Confidence            999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.89  E-value=6.7e-09  Score=100.48  Aligned_cols=85  Identities=22%  Similarity=0.439  Sum_probs=73.6

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      +.||+|+||.||++.. .+++.+|+|.+.... ......|.+|+.++.+++||||+++++.+......++|+||+++|+|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            4689999999999995 468899999876433 33346799999999999999999999999999999999999999999


Q ss_pred             HHHHhcC
Q 008332          548 DCYLFGL  554 (570)
Q Consensus       548 ~~~L~~~  554 (570)
                      .++++..
T Consensus        81 ~~~~~~~   87 (252)
T cd05084          81 LTFLRTE   87 (252)
T ss_pred             HHHHHhC
Confidence            9999753

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=5.2e-09  Score=106.68  Aligned_cols=90  Identities=24%  Similarity=0.350  Sum_probs=78.3

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|.+.+.||+|+||.||++.. .+++.||+|++....   ......+.+|+.++..++||||+++++.+......++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            577889999999999999995 468899999986321   2334578899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++.+.
T Consensus        82 ~~~~~~L~~~l~~~   95 (350)
T cd05573          82 YMPGGDLMNLLIRK   95 (350)
T ss_pred             CCCCCCHHHHHHHc
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.89  E-value=6.9e-09  Score=100.71  Aligned_cols=89  Identities=27%  Similarity=0.444  Sum_probs=76.8

Q ss_pred             CcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ++.+.+.||+|+||.||++....+..+++|.+.... .....|.+|+.++.+++||||+++.+.+......++|+||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            366778999999999999987767789999885332 2345788999999999999999999999888899999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      ++|.++++..
T Consensus        84 ~~L~~~l~~~   93 (256)
T cd05059          84 GCLLNYLRER   93 (256)
T ss_pred             CCHHHHHHhc
Confidence            9999999854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.89  E-value=4.4e-09  Score=108.02  Aligned_cols=92  Identities=23%  Similarity=0.260  Sum_probs=78.1

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|+..+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++..++||||+++.+.+......++|
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            45688889999999999999984 56889999998532   122334578899999999999999999999988999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.+++++.
T Consensus       122 ~Ey~~gg~L~~~l~~~  137 (370)
T cd05596         122 MEYMPGGDLVNLMSNY  137 (370)
T ss_pred             EcCCCCCcHHHHHHhc
Confidence            9999999999999754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.88  E-value=8.4e-09  Score=113.94  Aligned_cols=90  Identities=26%  Similarity=0.456  Sum_probs=78.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|.+.+.||+|+||.||+|.. ..++.||+|+++....   ...+.|.+|+.++.+++||||+++++.+...+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            3577889999999999999984 4588999999864321   22457999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhc
Q 008332          540 EYMPNKSLDCYLFG  553 (570)
Q Consensus       540 e~~~~GsL~~~L~~  553 (570)
                      ||+++|+|.++|..
T Consensus        82 EY~eGGSL~~lL~s   95 (932)
T PRK13184         82 PYIEGYTLKSLLKS   95 (932)
T ss_pred             EcCCCCCHHHHHHH
Confidence            99999999999975

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.88  E-value=4e-09  Score=98.38  Aligned_cols=93  Identities=26%  Similarity=0.366  Sum_probs=79.0

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|.....||.|+||+|...+ ..+|...|.|++.....   ...+....|..+++.+.||.+++|.+.+.+...++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            346667899999999999998 45688999999964322   22345678999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCC
Q 008332          540 EYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~  556 (570)
                      ||+++|.|..+|++.++
T Consensus       124 eyv~GGElFS~Lrk~~r  140 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGR  140 (355)
T ss_pred             eccCCccHHHHHHhcCC
Confidence            99999999999997554

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.88  E-value=2.2e-09  Score=107.60  Aligned_cols=104  Identities=15%  Similarity=0.236  Sum_probs=85.7

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe-eEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE-RMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~-~~lv~  539 (570)
                      ++|...+.+|+|+||.++... ..++..+++|.+.-..  ...++....|+.++++++|||||.....+...+. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            456677999999999998877 4557789999886333  3334578899999999999999999999998887 99999


Q ss_pred             ecCCCCCHHHHHhcCCCCcccccHhhhhcc
Q 008332          540 EYMPNKSLDCYLFGLSHQKTYFGLEKTCSY  569 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~~~~~~~~~~~~  569 (570)
                      +||+||+|.+.|.+.+  ..-++..++|.|
T Consensus        84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~  111 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK--GVLFPEERILKW  111 (426)
T ss_pred             eecCCCCHHHHHHHHh--hccccHHHHHHH
Confidence            9999999999999765  556777777765

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.88  E-value=7.9e-09  Score=104.48  Aligned_cols=90  Identities=19%  Similarity=0.183  Sum_probs=76.8

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|.+.+.||+|+||.||++.. ..++.+|+|.+....   ......+.+|..++..++|+||+++.+.+...+..++|||
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            577889999999999999994 457889999985321   2223458889999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|+..
T Consensus        82 y~~gg~L~~~l~~~   95 (331)
T cd05624          82 YYVGGDLLTLLSKF   95 (331)
T ss_pred             CCCCCcHHHHHHHh
Confidence            99999999999853

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.88  E-value=6.9e-09  Score=100.96  Aligned_cols=92  Identities=26%  Similarity=0.383  Sum_probs=78.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ..+++.+.+.||+|+||.||++....+..+++|.+... ....+.|.+|+.++.+++|+|++++.+.+.. ...++++||
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            45678888999999999999999777778999988643 2234679999999999999999999998876 778999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      +++|+|.+++.+..
T Consensus        82 ~~~~~L~~~~~~~~   95 (260)
T cd05073          82 MAKGSLLDFLKSDE   95 (260)
T ss_pred             CCCCcHHHHHHhCC
Confidence            99999999998643

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.88  E-value=8.9e-09  Score=104.08  Aligned_cols=90  Identities=20%  Similarity=0.277  Sum_probs=77.6

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|.+.+.||+|+||.||++.. .+++.+|+|.++...   ....+.+.+|+.++..++|+||+++.+.+......++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            577889999999999999984 568899999996422   2234568899999999999999999999998899999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++.+.
T Consensus        82 ~~~~~~L~~~l~~~   95 (330)
T cd05601          82 YQPGGDLLSLLNRY   95 (330)
T ss_pred             CCCCCCHHHHHHHh
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.88  E-value=6.6e-09  Score=104.12  Aligned_cols=83  Identities=17%  Similarity=0.177  Sum_probs=71.7

Q ss_pred             eeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          472 LGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       472 lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      ||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++.+++||||+++.+.+...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999999995 45789999998632   223345788999999999999999999999999999999999999999


Q ss_pred             HHHHhcC
Q 008332          548 DCYLFGL  554 (570)
Q Consensus       548 ~~~L~~~  554 (570)
                      .+++...
T Consensus        81 ~~~l~~~   87 (312)
T cd05585          81 FHHLQRE   87 (312)
T ss_pred             HHHHHhc
Confidence            9999753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.88  E-value=6.8e-09  Score=102.47  Aligned_cols=91  Identities=21%  Similarity=0.249  Sum_probs=78.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|++.+.||+|+||.||++.. .+++.+|+|.+.... ......+.+|+.++..++||||+++++.+......++|+||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            4567779999999999999994 468889999886432 33456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++++.
T Consensus        85 ~~~~~L~~~~~~~   97 (284)
T cd06620          85 MDCGSLDRIYKKG   97 (284)
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999998763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.88  E-value=5.4e-09  Score=115.99  Aligned_cols=107  Identities=15%  Similarity=0.226  Sum_probs=84.2

Q ss_pred             HHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC--Cee
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EER  535 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~  535 (570)
                      ....+|.+.+.||+|+||.||++.. ..+..+|+|.+...  .......|..|+.++.+++|||||++++.+...  ..+
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            3446788999999999999999994 55778999988632  233446799999999999999999999987654  468


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          536 MLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +|||||+++|+|.++|.........+++..++
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il  121 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIV  121 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHH
Confidence            99999999999999998644434445554443

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.88  E-value=7.9e-09  Score=103.04  Aligned_cols=105  Identities=25%  Similarity=0.369  Sum_probs=82.8

Q ss_pred             HHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeC
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS  532 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~  532 (570)
                      ...++|...+.||+|+||.||++..      ..+..+|+|.++... ....+.+.+|+.++.++ +||||+++++.+...
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  111 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG  111 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence            3345688889999999999999973      124479999986443 23345789999999999 799999999999999


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +..++++||+++|+|.++++....  ..+++.+++
T Consensus       112 ~~~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~  144 (302)
T cd05055         112 GPILVITEYCCYGDLLNFLRRKRE--SFLTLEDLL  144 (302)
T ss_pred             CceEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHH
Confidence            999999999999999999986432  224554443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.87  E-value=6.9e-09  Score=101.37  Aligned_cols=91  Identities=23%  Similarity=0.431  Sum_probs=78.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ++|+..+.||+|+||.||++.. .+++.+++|.++.........+.+|+.++..++||||+++++.+...+..++++||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            4567778999999999999984 568899999986544444556889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+++...
T Consensus        89 ~~~~L~~~~~~~  100 (267)
T cd06645          89 GGGSLQDIYHVT  100 (267)
T ss_pred             CCCcHHHHHHhc
Confidence            999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.87  E-value=9.4e-09  Score=105.23  Aligned_cols=90  Identities=19%  Similarity=0.293  Sum_probs=77.4

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|+..+.||+|+||.||++.. .+++.+|+|.++...   ......+.+|+.++.+++||||+++++.+......++|||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            567789999999999999984 468899999986321   2234568889999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|.+.
T Consensus        82 ~~~gg~L~~~l~~~   95 (360)
T cd05627          82 FLPGGDMMTLLMKK   95 (360)
T ss_pred             CCCCccHHHHHHhc
Confidence            99999999999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.87  E-value=5.5e-09  Score=103.33  Aligned_cols=92  Identities=26%  Similarity=0.512  Sum_probs=78.3

Q ss_pred             hcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      .++|+..+.||+|+||.||++...      .+..+|+|.+.... ......|.+|+.++.+++|||++++.+.+......
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            456778899999999999999843      35789999986433 23346799999999999999999999999988899


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++++||+++|+|.++++..
T Consensus        84 ~lv~e~~~~~~L~~~l~~~  102 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHR  102 (288)
T ss_pred             EEEEecCCCCCHHHHHHHc
Confidence            9999999999999999854

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.87  E-value=1.3e-08  Score=98.79  Aligned_cols=90  Identities=20%  Similarity=0.257  Sum_probs=77.6

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..++||+|+||.|+.+. ..+++.+++|.+...  .......+.+|+.++++++|+||+++++.+......++++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            36677999999999999888 455889999988533  334456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        81 ~~~~~L~~~~~~~   93 (256)
T cd08221          81 ANGGTLYDKIVRQ   93 (256)
T ss_pred             cCCCcHHHHHHhc
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.87  E-value=8.6e-09  Score=100.83  Aligned_cols=85  Identities=26%  Similarity=0.438  Sum_probs=70.2

Q ss_pred             eeeccCCccEEEEEecCC---cEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          471 KLGEGGYGPVYKGVLPCG---EVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~~~~---~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .||+|+||.||++....+   ..+++|.+.... ....+.|.+|+.++..++||||+++++.|....+.++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            589999999999984333   246677665332 2345679999999999999999999999999899999999999999


Q ss_pred             HHHHHhcCC
Q 008332          547 LDCYLFGLS  555 (570)
Q Consensus       547 L~~~L~~~~  555 (570)
                      |.+++++..
T Consensus        82 L~~~l~~~~   90 (268)
T cd05086          82 LKSYLSQEQ   90 (268)
T ss_pred             HHHHHHhhh
Confidence            999998643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.87  E-value=9e-09  Score=101.22  Aligned_cols=93  Identities=26%  Similarity=0.523  Sum_probs=79.0

Q ss_pred             hcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      .++|++.+.||+|++|.||++...      .+..|++|.+.... ......|.+|+.++.+++|+||+++++.+......
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            356788899999999999999954      35679999886433 33345799999999999999999999999988899


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++|+||+++|+|.++++..+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~  104 (277)
T cd05036          85 FILLELMAGGDLKSFLRENR  104 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhC
Confidence            99999999999999998654

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.87  E-value=8.3e-09  Score=100.96  Aligned_cols=91  Identities=29%  Similarity=0.485  Sum_probs=77.0

Q ss_pred             CcccceeeeccCCccEEEEEec-CC---cEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CG---EVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~---~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++++.+.||+|+||.||+|... ++   ..|++|.+... .......|..|+.++.+++||||+++.+.+....+.++|+
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            4677899999999999999853 23   36999998643 3334568999999999999999999999998888999999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      ||+++|+|.++++...
T Consensus        85 e~~~~~~L~~~l~~~~  100 (269)
T cd05065          85 EFMENGALDSFLRQND  100 (269)
T ss_pred             ecCCCCcHHHHHhhCC
Confidence            9999999999998643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.86  E-value=8.8e-09  Score=100.76  Aligned_cols=86  Identities=29%  Similarity=0.434  Sum_probs=71.6

Q ss_pred             eeeccCCccEEEEEecC---CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          471 KLGEGGYGPVYKGVLPC---GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~~~---~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .||+|+||.||+|....   ...+++|.+.... ......|.+|+.++..++||||+++++.+......++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999997432   3468888875432 2334578999999999999999999999998999999999999999


Q ss_pred             HHHHHhcCCC
Q 008332          547 LDCYLFGLSH  556 (570)
Q Consensus       547 L~~~L~~~~~  556 (570)
                      |.++|...+.
T Consensus        82 L~~~l~~~~~   91 (269)
T cd05042          82 LKNYLRSNRG   91 (269)
T ss_pred             HHHHHHhccc
Confidence            9999987543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.86  E-value=8.9e-09  Score=103.94  Aligned_cols=87  Identities=16%  Similarity=0.258  Sum_probs=73.2

Q ss_pred             cceeeecc--CCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          468 IRNKLGEG--GYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       468 ~~~~lg~G--~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +.++||+|  +|+.||++. ..+|+.||+|.+....  ......+.+|+.+++.++||||+++++.+..++..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45789999  688999998 4668899999986432  222345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+++...
T Consensus        82 ~~~~l~~~~~~~   93 (327)
T cd08227          82 AYGSAKDLICTH   93 (327)
T ss_pred             CCCcHHHHHHhh
Confidence            999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.86  E-value=1.1e-08  Score=103.31  Aligned_cols=85  Identities=20%  Similarity=0.151  Sum_probs=72.7

Q ss_pred             eeeeccCCccEEEEE-ecCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          470 NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      +.||+|+||.||++. ..+++.+|+|.+...   .......+..|+.++..++||||+++.+.+......++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            468999999999998 456889999998642   2233456788999999999999999999999999999999999999


Q ss_pred             CHHHHHhcC
Q 008332          546 SLDCYLFGL  554 (570)
Q Consensus       546 sL~~~L~~~  554 (570)
                      +|..++...
T Consensus        81 ~L~~~l~~~   89 (325)
T cd05594          81 ELFFHLSRE   89 (325)
T ss_pred             cHHHHHHhc
Confidence            999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.86  E-value=8e-09  Score=106.09  Aligned_cols=96  Identities=21%  Similarity=0.241  Sum_probs=80.4

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      +....++|++.+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++..++||||+++++.+.....
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            344557789999999999999999994 45789999998532   12223457889999999999999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++||||+++|+|.+++...
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~~  137 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSNY  137 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHhc
Confidence            99999999999999999754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.86  E-value=1.3e-08  Score=101.29  Aligned_cols=90  Identities=21%  Similarity=0.389  Sum_probs=79.4

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++..++|+|++++++.+......++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            5677889999999999999994 568999999986544444567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 008332          543 PNKSLDCYLFG  553 (570)
Q Consensus       543 ~~GsL~~~L~~  553 (570)
                      ++|+|.+++.+
T Consensus        99 ~~~~L~~~~~~  109 (297)
T cd06656          99 AGGSLTDVVTE  109 (297)
T ss_pred             CCCCHHHHHHh
Confidence            99999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.86  E-value=1.1e-08  Score=102.94  Aligned_cols=85  Identities=21%  Similarity=0.258  Sum_probs=72.1

Q ss_pred             eeeeccCCccEEEEEe----cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          470 NKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      +.||+|+||.||++..    ..|+.+|+|++....  ......+..|+.++.+++||||+++.+.+......++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999873    357899999986432  2233457789999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcC
Q 008332          544 NKSLDCYLFGL  554 (570)
Q Consensus       544 ~GsL~~~L~~~  554 (570)
                      +|+|.+++.+.
T Consensus        82 ~~~L~~~l~~~   92 (318)
T cd05582          82 GGDLFTRLSKE   92 (318)
T ss_pred             CCcHHHHHHHc
Confidence            99999999753

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.86  E-value=7.6e-09  Score=100.83  Aligned_cols=90  Identities=29%  Similarity=0.442  Sum_probs=75.7

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ..+|.+.+.||+|+||.||++.......|++|.++... ...+.|.+|+.++.+++||||+++.+.+. ....++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence            34588889999999999999987666679999986432 23467899999999999999999998764 45678999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+++++.
T Consensus        83 ~~~~L~~~~~~~   94 (262)
T cd05071          83 SKGSLLDFLKGE   94 (262)
T ss_pred             CCCcHHHHHhhc
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.86  E-value=9.1e-09  Score=102.25  Aligned_cols=92  Identities=32%  Similarity=0.530  Sum_probs=77.2

Q ss_pred             cCcccceeeeccCCccEEEEEec-----------------CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccce
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-----------------CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRV  525 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-----------------~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l  525 (570)
                      .+|++.+.||+|+||.||++...                 ++..+|+|.+... .......|.+|+.++.+++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            45788899999999999988521                 2346899998643 23345679999999999999999999


Q ss_pred             eEEEEeCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       526 ~g~~~~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++.+...+..++++||+++|+|.+++....
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHE  114 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcC
Confidence            999999999999999999999999998644

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.86  E-value=8.2e-09  Score=103.19  Aligned_cols=93  Identities=26%  Similarity=0.423  Sum_probs=77.8

Q ss_pred             hcCcccceeeeccCCccEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP--------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS  532 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~  532 (570)
                      .++|.+.+.||+|+||.||++...        ....+|+|.+.... ......+.+|+.++.++ +||||+++.+.+...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            456888999999999999998732        23469999986432 23345788999999999 799999999999999


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ...++|+||+++|+|.++|+..+
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~  119 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARR  119 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcC
Confidence            99999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.86  E-value=8.6e-09  Score=102.20  Aligned_cols=95  Identities=25%  Similarity=0.472  Sum_probs=79.2

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      ....++|+..+.||+|+||.||++...      ....+++|.+... .......+.+|+.++.++ +|+||+++++.+..
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   87 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ   87 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence            445566888899999999999999843      2357999998643 223345688999999999 89999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ....+++|||+++|+|.++++..
T Consensus        88 ~~~~~li~e~~~~~~L~~~l~~~  110 (293)
T cd05053          88 EGPLYVVVEYAAHGNLRDFLRAR  110 (293)
T ss_pred             CCCeEEEEEeCCCCcHHHHHHhc
Confidence            89999999999999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.86  E-value=3.6e-09  Score=108.74  Aligned_cols=91  Identities=23%  Similarity=0.389  Sum_probs=80.0

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +++++.||.|+-|.|..|+ ..+|+.+|||.+.....   .......+|+.+|+-+.|||+++|+.++....++|+|.||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            6778999999999999998 67899999999975422   2235688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCC
Q 008332          542 MPNKSLDCYLFGLSH  556 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~  556 (570)
                      +++|.|.++|..+..
T Consensus        94 v~gGELFdylv~kG~  108 (786)
T KOG0588|consen   94 VPGGELFDYLVRKGP  108 (786)
T ss_pred             cCCchhHHHHHhhCC
Confidence            999999999986543

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.86  E-value=1.4e-08  Score=99.14  Aligned_cols=89  Identities=33%  Similarity=0.649  Sum_probs=76.3

Q ss_pred             cccceeeeccCCccEEEEEecCCcEEEEEEecCCCc------ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++..+.||+|+||.||++...+++.+|+|.+.....      .....+.+|+.++.+++|+||+++.+.+......++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            556789999999999999977789999998853221      12345889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++.+.
T Consensus        82 e~~~~~~L~~~l~~~   96 (265)
T cd06631          82 EFVPGGSISSILNRF   96 (265)
T ss_pred             ecCCCCcHHHHHHhc
Confidence            999999999999753

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.86  E-value=1.2e-08  Score=98.92  Aligned_cols=89  Identities=30%  Similarity=0.387  Sum_probs=77.6

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      |...+.||+|++|.||++.. .+++.+++|.+...  .......+.+|+.++++++|||++++++.+......++|+||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            56678999999999999995 46889999998532  3344567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++++|.++++..
T Consensus        82 ~~~~L~~~l~~~   93 (256)
T cd08529          82 ENGDLHKLLKMQ   93 (256)
T ss_pred             CCCcHHHHHHHh
Confidence            999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.86  E-value=6.9e-09  Score=103.09  Aligned_cols=91  Identities=30%  Similarity=0.538  Sum_probs=76.3

Q ss_pred             cCcccceeeeccCCccEEEEEecC---------------CcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC---------------GEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLG  527 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~---------------~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g  527 (570)
                      .+|.+.+.||+|+||.||++....               ...||+|.++.. .......|.+|+.++.+++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            467788999999999999987421               235899998643 2334457999999999999999999999


Q ss_pred             EEEeCCeeEEEEecCCCCCHHHHHhcC
Q 008332          528 FCIDSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       528 ~~~~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .+......++||||+++|+|.+++...
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~  111 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQR  111 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhc
Confidence            999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.85  E-value=1e-09  Score=99.73  Aligned_cols=109  Identities=24%  Similarity=0.296  Sum_probs=95.0

Q ss_pred             HHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC-----Ce
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-----EE  534 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-----~~  534 (570)
                      +...+|.+.+.||+|+|..|+.+. +.++..+|+|++.....++.+..++|++..++++|||+++++..+..+     ..
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            345678888999999999999999 788999999999776666778899999999999999999998776543     35


Q ss_pred             eEEEEecCCCCCHHHHHhcCCCCcccccHhhhhcc
Q 008332          535 RMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY  569 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~~  569 (570)
                      .||+++|...|+|.+.+...+...+-++.++++.|
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~i  132 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWI  132 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHH
Confidence            89999999999999999988888888998888765

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.85  E-value=7.3e-09  Score=101.75  Aligned_cols=94  Identities=23%  Similarity=0.462  Sum_probs=78.9

Q ss_pred             HhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      ..++|.+.+.||+|+||.||++...      .+..+++|.+.... ......+.+|+.++..++||||+++++.+.....
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            3456788899999999999999853      23679999986432 2334578899999999999999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .++|+||+++|+|.++|....
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~  104 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRR  104 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcc
Confidence            999999999999999998644

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.85  E-value=1.7e-08  Score=100.38  Aligned_cols=90  Identities=20%  Similarity=0.403  Sum_probs=79.0

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+|+..+.||+|+||.||++. ..+++.+++|.+........+.+.+|+.++..++|+|++++.+.+......++|+||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            457778899999999999998 4568899999986544444567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 008332          543 PNKSLDCYLFG  553 (570)
Q Consensus       543 ~~GsL~~~L~~  553 (570)
                      ++|+|.+++.+
T Consensus       100 ~~~~L~~~~~~  110 (296)
T cd06654         100 AGGSLTDVVTE  110 (296)
T ss_pred             CCCCHHHHHHh
Confidence            99999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.85  E-value=1.5e-08  Score=98.34  Aligned_cols=89  Identities=29%  Similarity=0.502  Sum_probs=76.3

Q ss_pred             cccceeeeccCCccEEEEEec-CCcEEEEEEecCCC-----cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS-----TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~-----~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      |+..+.||+|++|.||+|... ++..+++|.+....     ....+.+.+|+.++.+++|+|++++.+.+......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            456689999999999999954 68899999885322     123457899999999999999999999999889999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++++|.+++++.
T Consensus        82 e~~~~~~L~~~~~~~   96 (258)
T cd06632          82 ELVPGGSLAKLLKKY   96 (258)
T ss_pred             EecCCCcHHHHHHhc
Confidence            999999999999753

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.85  E-value=1.3e-08  Score=100.89  Aligned_cols=91  Identities=25%  Similarity=0.484  Sum_probs=79.9

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +.|++.+.||+|+||.||++.. .++..+++|.+........+.+.+|+.++..++|||++++.+.+......++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            5577789999999999999995 457899999987655555678999999999999999999999999899999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|..++.+.
T Consensus        92 ~~~~l~~~~~~~  103 (292)
T cd06644          92 PGGAVDAIMLEL  103 (292)
T ss_pred             CCCcHHHHHHhh
Confidence            999999988754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.85  E-value=2e-08  Score=97.32  Aligned_cols=90  Identities=19%  Similarity=0.282  Sum_probs=77.2

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecC-CCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~-~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|++.+.||+|+||.||++. ..+++.+++|.++. ......+.+.+|+.++.+++|+|++++.+.+......++++||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            35677999999999999998 45688999999853 22334567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+++...
T Consensus        81 ~~~~l~~~~~~~   92 (255)
T cd08219          81 DGGDLMQKIKLQ   92 (255)
T ss_pred             CCCcHHHHHHhc
Confidence            999999999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.85  E-value=1.1e-08  Score=100.68  Aligned_cols=92  Identities=27%  Similarity=0.532  Sum_probs=79.1

Q ss_pred             cCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .++...+.||+|+||.||++...      .+..+++|.+..........|.+|+.++..++|+||+++++.+......++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            45677799999999999999732      355799999876655556789999999999999999999999998889999


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      ++||+++|+|.++++...
T Consensus        85 v~e~~~~~~L~~~i~~~~  102 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHG  102 (280)
T ss_pred             EEecCCCCCHHHHHHhcC
Confidence            999999999999998653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=2.4e-09  Score=108.38  Aligned_cols=91  Identities=23%  Similarity=0.387  Sum_probs=79.0

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ..|..-+.||+|+-|.||.+. ...++.||||++........+-.+.|+.+|...+|+|||+++..+...+++|+|||||
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            345556789999999999998 6678899999996554444556789999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+.+.+.
T Consensus       353 ~ggsLTDvVt~~  364 (550)
T KOG0578|consen  353 EGGSLTDVVTKT  364 (550)
T ss_pred             CCCchhhhhhcc
Confidence            999999998754

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.84  E-value=8.2e-09  Score=100.62  Aligned_cols=91  Identities=34%  Similarity=0.571  Sum_probs=78.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .++...+.||+|++|.||++.. ..++.+++|.+... .....++.+|+.++.+++|+|++++++.+......+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            3467778999999999999995 45788999998643 234567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC
Q 008332          543 PNKSLDCYLFGLS  555 (570)
Q Consensus       543 ~~GsL~~~L~~~~  555 (570)
                      ++|+|.+++....
T Consensus        85 ~~~~L~~~~~~~~   97 (263)
T cd05052          85 TYGNLLDYLRECN   97 (263)
T ss_pred             CCCcHHHHHHhCC
Confidence            9999999997643

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.84  E-value=9.8e-09  Score=99.89  Aligned_cols=90  Identities=29%  Similarity=0.426  Sum_probs=76.3

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+++++.+.||+|+||.||++....+..+++|.+..... ..+.|.+|+.++.+++|+|++++++.+. ....+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM   82 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence            345777899999999999999987788899999864332 3467999999999999999999998774 45688999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+++++.
T Consensus        83 ~~~~L~~~~~~~   94 (260)
T cd05070          83 SKGSLLDFLKDG   94 (260)
T ss_pred             CCCcHHHHHHhc
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.84  E-value=1.4e-08  Score=100.32  Aligned_cols=99  Identities=20%  Similarity=0.285  Sum_probs=78.5

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  540 (570)
                      +|...+.||.|.+|.||++.. ..++.+++|.+.... ......+.+|+.++++++||||+++++.+...  ...++|||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            466778999999999999995 457889999986432 23446789999999999999999999988654  36899999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccH
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGL  563 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~  563 (570)
                      |+++|+|.+++.........++.
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~  104 (287)
T cd06621          82 YCEGGSLDSIYKKVKKRGGRIGE  104 (287)
T ss_pred             ecCCCCHHHHHHHHHhcCCCCCH
Confidence            99999999998754333333443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.84  E-value=1.8e-08  Score=100.58  Aligned_cols=90  Identities=27%  Similarity=0.383  Sum_probs=76.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|.+.+.||+|+||.||++.. .+++.+|+|.+..... .....+.+|+.++.+++||||+++.+++......++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            5688889999999999999995 4688999999864322 2234678899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      ++ |+|.+++...
T Consensus        85 ~~-~~l~~~~~~~   96 (303)
T cd07869          85 VH-TDLCQYMDKH   96 (303)
T ss_pred             CC-cCHHHHHHhC
Confidence            95 6899988754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.83  E-value=1.2e-08  Score=99.69  Aligned_cols=89  Identities=26%  Similarity=0.464  Sum_probs=76.4

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc------ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      |+..+.||+|++|.||++. ..+++.+++|.+.....      ...+.+.+|+.++++++|+||+++++.+...+..++|
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            5667899999999999998 46688999999863221      1245789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      +||+++++|.++|.+.
T Consensus        82 ~e~~~~~~L~~~l~~~   97 (268)
T cd06630          82 VEWMAGGSVSHLLSKY   97 (268)
T ss_pred             EeccCCCcHHHHHHHh
Confidence            9999999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.83  E-value=1.7e-08  Score=101.91  Aligned_cols=85  Identities=15%  Similarity=0.202  Sum_probs=72.0

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ++||+|+||.||++.. .+++.+|+|.++...   ......+.+|..++.++ +||||+++.+++......++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4689999999999984 568899999996422   22345688999999988 799999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|.+++...
T Consensus        81 g~L~~~~~~~   90 (329)
T cd05588          81 GDLMFHMQRQ   90 (329)
T ss_pred             CCHHHHHHHc
Confidence            9999998754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.82  E-value=1.8e-08  Score=99.67  Aligned_cols=90  Identities=27%  Similarity=0.398  Sum_probs=75.8

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|...+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.++.+++||||+++.+++......++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            4577789999999999999984 468899999986432 22345678999999999999999999999888889999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      ++ |+|.+++...
T Consensus        85 ~~-~~l~~~l~~~   96 (288)
T cd07871          85 LD-SDLKQYLDNC   96 (288)
T ss_pred             CC-cCHHHHHHhc
Confidence            97 4999998754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.82  E-value=1.9e-08  Score=99.37  Aligned_cols=99  Identities=21%  Similarity=0.316  Sum_probs=78.9

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      |+..+.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.++..++|+|++++.+.+...+..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            45568899999999999984 568899999985432   12234578899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      +++|+|.+++....  ...+++.++
T Consensus        82 ~~~~~L~~~~~~~~--~~~~~~~~~  104 (285)
T cd05632          82 MNGGDLKFHIYNMG--NPGFEEERA  104 (285)
T ss_pred             ccCccHHHHHHHhc--CCCCCHHHH
Confidence            99999999987532  223454443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.82  E-value=1.3e-08  Score=99.24  Aligned_cols=85  Identities=19%  Similarity=0.394  Sum_probs=71.2

Q ss_pred             eeeeccCCccEEEEEecC-------------CcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          470 NKLGEGGYGPVYKGVLPC-------------GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~-------------~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      +.||+|+||.||+|....             ...|++|.+..........|.+|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999998432             2258899886544444557889999999999999999999999988999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +++||+++|+|..+++..
T Consensus        81 lv~e~~~~~~l~~~~~~~   98 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK   98 (262)
T ss_pred             EEEecccCCCHHHHHHhc
Confidence            999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.82  E-value=2.1e-08  Score=99.36  Aligned_cols=90  Identities=28%  Similarity=0.360  Sum_probs=77.7

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|++.+.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.++.+++||||+++++.+......++|||
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            577789999999999999994 458899999985322   2234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus        82 ~~~~~~L~~~~~~~   95 (290)
T cd05580          82 YVPGGELFSHLRKS   95 (290)
T ss_pred             cCCCCCHHHHHHHc
Confidence            99999999999764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.82  E-value=1.7e-08  Score=98.59  Aligned_cols=91  Identities=30%  Similarity=0.556  Sum_probs=76.8

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCc---EEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGE---VIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~---~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .+|+..+.||+|+||.||++... +++   .+++|.+... .....+.+..|+.++.+++|||++++.+.+...+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            35677799999999999999853 333   6999998643 233356799999999999999999999999988999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.+++++.
T Consensus        85 ~e~~~~~~L~~~~~~~  100 (268)
T cd05063          85 TEYMENGALDKYLRDH  100 (268)
T ss_pred             EEcCCCCCHHHHHHhc
Confidence            9999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.82  E-value=1.6e-08  Score=99.65  Aligned_cols=90  Identities=31%  Similarity=0.612  Sum_probs=76.3

Q ss_pred             CcccceeeeccCCccEEEEEecC-C-----cEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPC-G-----EVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~-~-----~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      +|++.+.||+|+||.||+|.... +     ..+++|.+.... ......|.+|+.++.+++||||+++++.+......++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   85 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM   85 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence            57778999999999999998532 2     579999986433 2334578999999999999999999999998889999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ++||+++|+|.++|...
T Consensus        86 ~~e~~~~~~L~~~l~~~  102 (283)
T cd05048          86 LFEYLAHGDLHEFLVRN  102 (283)
T ss_pred             EEecCCCCcHHHHHHhc
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.82  E-value=1.6e-08  Score=102.27  Aligned_cols=90  Identities=21%  Similarity=0.225  Sum_probs=76.2

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|++.+.||+|+||.||++.. ..++.+|+|.+....   ......|.+|+.++..++|+||+++.+.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            577889999999999999995 447789999985321   2223458889999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|++.
T Consensus        82 y~~~g~L~~~l~~~   95 (332)
T cd05623          82 YYVGGDLLTLLSKF   95 (332)
T ss_pred             ccCCCcHHHHHHHh
Confidence            99999999999853

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.82  E-value=1.3e-08  Score=98.81  Aligned_cols=84  Identities=27%  Similarity=0.554  Sum_probs=69.6

Q ss_pred             eeeeccCCccEEEEEecC-C----------cEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          470 NKLGEGGYGPVYKGVLPC-G----------EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~-~----------~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +.||+|+||.||++.... +          ..+++|.+...... ...|.+|+.++.+++|||++++++.+.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            468999999999999643 2          24778877543322 5789999999999999999999999988 778999


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      +||+++|+|.+++....
T Consensus        79 ~e~~~~~~L~~~l~~~~   95 (259)
T cd05037          79 EEYVKFGPLDVFLHREK   95 (259)
T ss_pred             EEcCCCCcHHHHHHhhc
Confidence            99999999999998643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.82  E-value=2.1e-08  Score=98.65  Aligned_cols=91  Identities=31%  Similarity=0.529  Sum_probs=75.5

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCc----EEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGE----VIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~----~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|+..+.||+|+||.||+|... ++.    .+++|.+.... ......+.+|+.++.+++|||++++++.|.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            45677899999999999999843 333    58999886443 3344678999999999999999999999987 78899


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      ++||+++|+|.++|+...
T Consensus        86 v~e~~~~g~L~~~l~~~~  103 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHK  103 (279)
T ss_pred             EEecCCCCcHHHHHHhcc
Confidence            999999999999998643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.82  E-value=4.7e-09  Score=102.03  Aligned_cols=86  Identities=27%  Similarity=0.469  Sum_probs=71.8

Q ss_pred             eeeeccCCccEEEEEecC--------CcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          470 NKLGEGGYGPVYKGVLPC--------GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~--------~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +.||+|+||.||+|....        ...+++|.+........+.|.+|+.++..++|||++++.+.+..+...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            468999999999998421        234888887544444456789999999999999999999999998899999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      +++|+|.++|+...
T Consensus        81 ~~~g~L~~~l~~~~   94 (258)
T cd05078          81 VKFGSLDTYLKKNK   94 (258)
T ss_pred             CCCCcHHHHHhcCC
Confidence            99999999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.82  E-value=2.2e-08  Score=99.50  Aligned_cols=90  Identities=21%  Similarity=0.444  Sum_probs=79.3

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+|+..+.||.|++|.||++. ..+++.|++|.+........+.+.+|+.++..++|||++++++.+......++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            457888999999999999998 4668899999986544444567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 008332          543 PNKSLDCYLFG  553 (570)
Q Consensus       543 ~~GsL~~~L~~  553 (570)
                      ++|+|.+++.+
T Consensus        99 ~~~~L~~~~~~  109 (296)
T cd06655          99 AGGSLTDVVTE  109 (296)
T ss_pred             CCCcHHHHHHh
Confidence            99999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.82  E-value=2.3e-08  Score=96.81  Aligned_cols=91  Identities=19%  Similarity=0.306  Sum_probs=77.9

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|...+.||+|++|.||++.. .+++.+++|.+...  .......+.+|+.++++++|||++++.+.+......++|+||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            366779999999999999984 56889999998643  223456789999999999999999999999888899999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      +++++|.+++....
T Consensus        81 ~~~~~L~~~~~~~~   94 (256)
T cd08220          81 APGGTLAEYIQKRC   94 (256)
T ss_pred             CCCCCHHHHHHHhc
Confidence            99999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.81  E-value=2.4e-08  Score=98.14  Aligned_cols=88  Identities=22%  Similarity=0.388  Sum_probs=75.8

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      |+..+.||+|+||.||++.. .++..+|+|.+.... ......+.+|+.++.+++||||+++++.+......++|+||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            55668899999999999984 457899999885332 2334678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhc
Q 008332          544 NKSLDCYLFG  553 (570)
Q Consensus       544 ~GsL~~~L~~  553 (570)
                      +|+|.+++..
T Consensus        86 ~~~l~~~i~~   95 (277)
T cd06641          86 GGSALDLLEP   95 (277)
T ss_pred             CCcHHHHHhc
Confidence            9999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.81  E-value=7.7e-09  Score=112.34  Aligned_cols=98  Identities=27%  Similarity=0.411  Sum_probs=83.9

Q ss_pred             HHHHHhcCcccceeeeccCCccEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeE
Q 008332          458 DIEAATERFSIRNKLGEGGYGPVYKGVLP--------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLG  527 (570)
Q Consensus       458 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g  527 (570)
                      .++...+++.+.+.||+|.||.|++|.+.        ....||||.++... ....+.+..|+.+|..+ +|+|++.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            45666777777789999999999999842        13479999997433 34567899999999999 6999999999


Q ss_pred             EEEeCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          528 FCIDSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       528 ~~~~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      +|....+.++|+||+++|+|.+||+..+
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhcc
Confidence            9999999999999999999999999877

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.81  E-value=2.3e-08  Score=96.95  Aligned_cols=91  Identities=18%  Similarity=0.285  Sum_probs=77.8

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..+.||+|+||.+|++.. .+++.+++|.+...  ......++.+|+.++++++||||+++.+.+...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            366779999999999999984 56889999998532  233445789999999999999999999999988999999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      +++++|.+++...+
T Consensus        81 ~~~~~l~~~~~~~~   94 (256)
T cd08218          81 CEGGDLYKKINAQR   94 (256)
T ss_pred             CCCCcHHHHHHhcc
Confidence            99999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.81  E-value=1.7e-08  Score=100.65  Aligned_cols=92  Identities=27%  Similarity=0.466  Sum_probs=76.1

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCc--EEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGE--VIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~--~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .+|++.+.||+|+||.||++... ++.  .+++|.++... ......+.+|+.++.++ +|+||+++.+.+...+..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            35777899999999999999953 344  46888775432 23445788999999999 899999999999988999999


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      +||+++|+|.++|+..+
T Consensus        87 ~e~~~~~~L~~~l~~~~  103 (303)
T cd05088          87 IEYAPHGNLLDFLRKSR  103 (303)
T ss_pred             EEeCCCCcHHHHHHhcc
Confidence            99999999999998653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.81  E-value=1.4e-08  Score=108.12  Aligned_cols=105  Identities=17%  Similarity=0.204  Sum_probs=82.2

Q ss_pred             HHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC----
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE----  533 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~----  533 (570)
                      ....+|.+.+.||+|+||.||++. ..+++.||||.+...  .......+.+|+.++..++|+|++++...+....    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            345678999999999999999998 556899999998643  2334457889999999999999999887665432    


Q ss_pred             ----eeEEEEecCCCCCHHHHHhcCCCCcccccHhh
Q 008332          534 ----ERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       534 ----~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                          ..++||||+++|+|.++|+........++...
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~  144 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHE  144 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHH
Confidence                36799999999999999986554444555443

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.81  E-value=2e-08  Score=99.77  Aligned_cols=93  Identities=30%  Similarity=0.447  Sum_probs=78.0

Q ss_pred             hcCcccceeeeccCCccEEEEEecC-----------------CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccc
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPC-----------------GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIR  524 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~-----------------~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~  524 (570)
                      ..+|.+.+.||+|+||.||++....                 +..||+|.+.... ....+.|.+|+.++.+++|||+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3467788999999999999987421                 2468999986433 334567999999999999999999


Q ss_pred             eeEEEEeCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          525 VLGFCIDSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       525 l~g~~~~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      +++.+...+..++++||+++++|.++|.+..
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHV  114 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence            9999998899999999999999999998654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.81  E-value=1.9e-08  Score=101.44  Aligned_cols=88  Identities=22%  Similarity=0.307  Sum_probs=71.4

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHH---HccCCCCccceeEEEEeCCeeEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLT---AKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l---~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      |.+.+.||+|+||.||++.. .+++.||+|.++...   ....+.+.+|..++   .+++||||+++++++......++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            35578999999999999984 568899999996321   22334566676654   567899999999999999999999


Q ss_pred             EecCCCCCHHHHHhc
Q 008332          539 YEYMPNKSLDCYLFG  553 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~  553 (570)
                      |||+++|+|..++++
T Consensus        81 ~E~~~~~~L~~~~~~   95 (324)
T cd05589          81 MEYAAGGDLMMHIHT   95 (324)
T ss_pred             EcCCCCCcHHHHhhc
Confidence            999999999998864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.81  E-value=1.5e-08  Score=99.32  Aligned_cols=89  Identities=28%  Similarity=0.502  Sum_probs=74.5

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---c-------cHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---Q-------GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~-------~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      +...+.||+|+||.||+|.. .+++.+|+|.++....   .       ..+.+.+|+.++.+++|||++++++.+...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            45668999999999999984 4688999998752111   0       12457889999999999999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++|+||+++|+|.+++++.
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~  102 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTY  102 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhc
Confidence            99999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.81  E-value=1.4e-08  Score=100.56  Aligned_cols=111  Identities=25%  Similarity=0.339  Sum_probs=85.4

Q ss_pred             ChHHHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeC
Q 008332          455 SLADIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS  532 (570)
Q Consensus       455 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~  532 (570)
                      .+.++..+.++|...+.||+|+||.||++.. .+++.+++|.+.... .....+.+|+.++.++ +|||++++++.+...
T Consensus        13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            3344555678899999999999999999995 568899999985432 2235677899999998 899999999998754


Q ss_pred             C-----eeEEEEecCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          533 E-----ERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       533 ~-----~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      +     ..++|+||+++|+|.++++........+++..+
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~  130 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMI  130 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHH
Confidence            3     579999999999999998754333344454443

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.81  E-value=1.9e-08  Score=98.45  Aligned_cols=90  Identities=27%  Similarity=0.511  Sum_probs=73.4

Q ss_pred             cccceeeeccCCccEEEEEecC----CcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe-----
Q 008332          466 FSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE-----  534 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~-----  534 (570)
                      |++.+.||+|+||.||+|....    +..+|+|.++...  ......+.+|+..+.+++|||++++++.+.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4567899999999999998532    3679999986432  2334679999999999999999999999876554     


Q ss_pred             -eEEEEecCCCCCHHHHHhcCC
Q 008332          535 -RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 -~~lv~e~~~~GsL~~~L~~~~  555 (570)
                       .++++||+++|+|..++...+
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~  102 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSR  102 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhh
Confidence             789999999999999997543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.81  E-value=1.9e-08  Score=99.73  Aligned_cols=91  Identities=26%  Similarity=0.529  Sum_probs=77.8

Q ss_pred             cCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|.+.+.||+|+||.||++...      ++..+++|.+........+.+.+|+.++.+++|+||+++.+.+......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            34777899999999999999732      245689999865555555679999999999999999999999998899999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.++++..
T Consensus        85 v~e~~~~~~L~~~i~~~  101 (291)
T cd05094          85 VFEYMKHGDLNKFLRAH  101 (291)
T ss_pred             EEecCCCCcHHHHHHhc
Confidence            99999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.81  E-value=1.1e-08  Score=101.07  Aligned_cols=90  Identities=24%  Similarity=0.364  Sum_probs=77.8

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|++.+.||+|+||.||++... .+..+|+|.+... .......+.+|+.++.+++||||+++++.+......++|+||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            4677789999999999999954 6889999988643 2333467999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++++|.++++..
T Consensus        82 ~~~~l~~~~~~~   93 (286)
T cd06622          82 DAGSLDKLYAGG   93 (286)
T ss_pred             CCCCHHHHHHhc
Confidence            999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.81  E-value=2.4e-08  Score=98.68  Aligned_cols=89  Identities=22%  Similarity=0.315  Sum_probs=75.0

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      |+..+.||+|+||.||++.. .+++.+|+|.+.....   .....+.+|+.++.+++|+|++++.+.+...+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            55668899999999999984 5688999999853321   2234578899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        82 ~~g~~L~~~l~~~   94 (285)
T cd05630          82 MNGGDLKFHIYHM   94 (285)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999999653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.81  E-value=1.8e-08  Score=100.50  Aligned_cols=94  Identities=24%  Similarity=0.446  Sum_probs=78.1

Q ss_pred             HhcCcccceeeeccCCccEEEEEe--------cCCcEEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL--------PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~--------~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      ...++.+.+.||+|+||.||++..        ..+..+++|.+... .......+.+|+.++..+ +||||+++++.+..
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            345677889999999999999973        12347999988643 233456789999999999 89999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ....+++|||+++|+|.++|...+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~  116 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARR  116 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcC
Confidence            899999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.81  E-value=2e-08  Score=99.14  Aligned_cols=100  Identities=29%  Similarity=0.443  Sum_probs=79.3

Q ss_pred             CcccceeeeccCCccEEEEEe-----cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERM  536 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~  536 (570)
                      .|+..+.||+|+||.||++.+     ..+..|++|.++... ......+.+|+.++++++|||++++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            356778999999999999974     346789999986443 33346799999999999999999999998775  5688


Q ss_pred             EEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +||||+++|+|.+++.+..   ..+++.+++
T Consensus        85 lv~e~~~g~~L~~~l~~~~---~~~~~~~~~  112 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNK---NKINLKQQL  112 (284)
T ss_pred             EEEEccCCCCHHHHHHhcc---CCCCHHHHH
Confidence            9999999999999997532   234555444

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.81  E-value=1.7e-08  Score=99.75  Aligned_cols=87  Identities=23%  Similarity=0.378  Sum_probs=73.3

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|++.+.||+|+||.||++.. .+++.+|+|++....  ....+.+.+|+.++.+++||||+++.+++...+..++||||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            577889999999999999995 457889999986432  23345788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHH
Q 008332          542 MPNKSLDCYL  551 (570)
Q Consensus       542 ~~~GsL~~~L  551 (570)
                      ++++.|..+.
T Consensus        82 ~~~~~l~~~~   91 (287)
T cd07848          82 VEKNMLELLE   91 (287)
T ss_pred             CCCCHHHHHH
Confidence            9987666554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.80  E-value=2.1e-08  Score=98.38  Aligned_cols=90  Identities=20%  Similarity=0.339  Sum_probs=77.6

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|+..+.||.|++|.||++.. .+++.+++|.+.... ......+.+|+.++++++|+|++++.+.+......++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            466678899999999999995 458899999986432 334467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.++++..
T Consensus        82 ~~~~L~~~~~~~   93 (274)
T cd06609          82 GGGSCLDLLKPG   93 (274)
T ss_pred             CCCcHHHHHhhc
Confidence            999999999853

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.80  E-value=1.6e-08  Score=101.54  Aligned_cols=94  Identities=26%  Similarity=0.450  Sum_probs=77.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEe--------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL--------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~--------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      ..++|.+.+.||+|+||.||++..        .....+|+|.++... ......+..|+.++.++ +||||+++++++..
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            345678889999999999999973        124468999986432 23346788999999999 69999999999998


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ....++++||+++|+|.++|....
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~~  113 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRARR  113 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcC
Confidence            889999999999999999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.80  E-value=2.1e-08  Score=98.82  Aligned_cols=89  Identities=24%  Similarity=0.461  Sum_probs=76.9

Q ss_pred             cccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +++.+.||+|+||.||++... .+..+++|.+..........+.+|+.++..++|||++++.+.+......++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            455678999999999999954 4778899998655555566799999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|..++++.
T Consensus        87 ~~l~~~~~~~   96 (282)
T cd06643          87 GAVDAVMLEL   96 (282)
T ss_pred             CcHHHHHHhc
Confidence            9999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.80  E-value=2.5e-08  Score=98.76  Aligned_cols=90  Identities=27%  Similarity=0.429  Sum_probs=75.4

Q ss_pred             cccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      |++.+.||+|+||.||+|...      ....+++|.+.... ......+.+|+.++..++||||+++++.+......+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            567789999999999999842      23468999886433 23346799999999999999999999999988999999


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      +||+++|+|.++|...+
T Consensus        82 ~e~~~~~~L~~~l~~~~   98 (290)
T cd05045          82 VEYAKYGSLRSFLRESR   98 (290)
T ss_pred             EEecCCCCHHHHHHhcC
Confidence            99999999999998643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.80  E-value=2.9e-08  Score=96.29  Aligned_cols=90  Identities=24%  Similarity=0.493  Sum_probs=77.8

Q ss_pred             CcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +++..+.||+|+||.||++....+..+++|.+.... .....|.+|+.++.+++|||++++++.+......++++||+++
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            466779999999999999987667889999885432 2345799999999999999999999999888899999999999


Q ss_pred             CCHHHHHhcCC
Q 008332          545 KSLDCYLFGLS  555 (570)
Q Consensus       545 GsL~~~L~~~~  555 (570)
                      |+|.++++...
T Consensus        84 ~~L~~~~~~~~   94 (256)
T cd05112          84 GCLSDYLRAQR   94 (256)
T ss_pred             CcHHHHHHhCc
Confidence            99999998643

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.80  E-value=1.9e-08  Score=101.03  Aligned_cols=91  Identities=32%  Similarity=0.553  Sum_probs=74.8

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCc----EEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~----~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|+..+.||+|+||.||+|.. .++.    .||+|.++... ....+.|.+|+.++..++||||++++|.|... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            3578889999999999999984 3343    48999986433 33456799999999999999999999998764 5679


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      ++||+++|+|.+++++..
T Consensus        86 v~e~~~~g~l~~~l~~~~  103 (316)
T cd05108          86 ITQLMPFGCLLDYVREHK  103 (316)
T ss_pred             eeecCCCCCHHHHHHhcc
Confidence            999999999999998643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.79  E-value=2.2e-08  Score=97.12  Aligned_cols=90  Identities=26%  Similarity=0.406  Sum_probs=77.1

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..+.||+|+||.||++.. .++..+++|.+...  .....+.+.+|+.++++++|+|++++++.+......++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            366779999999999999995 45788999998532  223445788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~~~~~   93 (257)
T cd08225          81 CDGGDLMKRINRQ   93 (257)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.79  E-value=3.3e-08  Score=95.65  Aligned_cols=104  Identities=21%  Similarity=0.327  Sum_probs=85.1

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|...+.||+|+||.||++.. .+++.+++|++.....  .....+.+|++++.+++|+|++++.+.+......++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            356778999999999999995 4588999999864332  4456789999999999999999999999888999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      +++++|.+++.........+++.++++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~  107 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILD  107 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHH
Confidence            999999999987654345556555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.79  E-value=3.1e-08  Score=96.28  Aligned_cols=92  Identities=24%  Similarity=0.443  Sum_probs=80.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .++|+..+.||+|+||.||++.. .+++.+++|.+........+.+.+|+.++.+++|||++++.+.+......+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            35678889999999999999984 45788999998755444567899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++++|.+++...
T Consensus        82 ~~~~~l~~~~~~~   94 (262)
T cd06613          82 CGGGSLQDIYQVT   94 (262)
T ss_pred             CCCCcHHHHHHhh
Confidence            9999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.79  E-value=2.4e-08  Score=99.29  Aligned_cols=89  Identities=28%  Similarity=0.399  Sum_probs=75.4

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcc-----cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQ-----GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~-----~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      |+..+.||+|++|.||+|.. .+++.|++|.++.....     ....+..|+.++.+++|+||+++++.+......++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            56678999999999999995 46889999999643322     2345778999999999999999999999988999999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      ||+ +|+|.+++....
T Consensus        82 e~~-~~~L~~~i~~~~   96 (298)
T cd07841          82 EFM-ETDLEKVIKDKS   96 (298)
T ss_pred             ccc-CCCHHHHHhccC
Confidence            999 999999998643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.79  E-value=2.6e-08  Score=97.95  Aligned_cols=89  Identities=20%  Similarity=0.385  Sum_probs=76.5

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .|+..+.||+|+||.||++.. ..+..+|+|.+.... ......+.+|+.++.++.|||++++.+.+......++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            355668899999999999985 457899999986332 334567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 008332          543 PNKSLDCYLFG  553 (570)
Q Consensus       543 ~~GsL~~~L~~  553 (570)
                      ++|+|.++++.
T Consensus        85 ~~~~L~~~i~~   95 (277)
T cd06640          85 GGGSALDLLRA   95 (277)
T ss_pred             CCCcHHHHHhc
Confidence            99999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.79  E-value=2.2e-08  Score=100.82  Aligned_cols=85  Identities=25%  Similarity=0.338  Sum_probs=72.1

Q ss_pred             eeeeccCCccEEEEEe----cCCcEEEEEEecCCC----cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          470 NKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTS----TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~----~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +.||+|+||.||++..    ..++.+|+|.++...    ......+.+|+.++..++||||+++++.+......++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            6799999999999984    357889999986321    12234578899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        82 ~~~~~L~~~~~~~   94 (323)
T cd05584          82 LSGGELFMHLERE   94 (323)
T ss_pred             CCCchHHHHHHHc
Confidence            9999999999754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.79  E-value=1.2e-08  Score=104.29  Aligned_cols=86  Identities=22%  Similarity=0.361  Sum_probs=72.9

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +++..+.||+|+||.||++.. .+++.||+|.+..... .....+.+|+.++.+++|+||+++++.+......++|+||+
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            345568899999999999984 4688999999864322 33467899999999999999999999999899999999999


Q ss_pred             CCCCHHHH
Q 008332          543 PNKSLDCY  550 (570)
Q Consensus       543 ~~GsL~~~  550 (570)
                      ++|+|...
T Consensus       155 ~~~~L~~~  162 (353)
T PLN00034        155 DGGSLEGT  162 (353)
T ss_pred             CCCccccc
Confidence            99998754

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.79  E-value=2.8e-08  Score=97.93  Aligned_cols=91  Identities=31%  Similarity=0.511  Sum_probs=76.3

Q ss_pred             CcccceeeeccCCccEEEEEec-----CCcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEe--CCeeE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-----CGEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCID--SEERM  536 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-----~~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~--~~~~~  536 (570)
                      .++..+.||+|+||.||++...     .+..+|+|.+...... ..+.|.+|+.++.+++|+||+++.+.+..  ....+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4666789999999999999853     3678999999644332 45689999999999999999999998877  45789


Q ss_pred             EEEecCCCCCHHHHHhcCC
Q 008332          537 LIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~  555 (570)
                      +++||+++|+|.+++....
T Consensus        85 lv~e~~~~~~l~~~l~~~~  103 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHR  103 (284)
T ss_pred             EEEecCCCCCHHHHHHhCc
Confidence            9999999999999998644

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.79  E-value=2.1e-08  Score=99.44  Aligned_cols=91  Identities=22%  Similarity=0.418  Sum_probs=78.9

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+|...+.||+|+||.||++. ..++..+++|.+........+.+.+|+.++.+++|||++++.+.+...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            467778999999999999998 4567899999986444444567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+++.+.
T Consensus        99 ~~~~L~~~~~~~  110 (293)
T cd06647          99 AGGSLTDVVTET  110 (293)
T ss_pred             CCCcHHHHHhhc
Confidence            999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.79  E-value=2.2e-08  Score=97.08  Aligned_cols=94  Identities=30%  Similarity=0.401  Sum_probs=76.2

Q ss_pred             eeeeccCCccEEEEEecC--C--cEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVLPC--G--EVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~--~--~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|++|.||++....  +  ..+|+|.+..... ...+.|.+|+.++.+++||||+++++.+.. ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999998532  3  2699999975544 455689999999999999999999999887 889999999999


Q ss_pred             CCHHHHHhcCCCCcccccHhhh
Q 008332          545 KSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       545 GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      |+|.+++.+...  ..+++.++
T Consensus        80 ~~L~~~l~~~~~--~~~~~~~~   99 (257)
T cd05040          80 GSLLDRLRKDAL--GHFLISTL   99 (257)
T ss_pred             CcHHHHHHhccc--ccCcHHHH
Confidence            999999987542  33454443

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.79  E-value=3e-08  Score=98.96  Aligned_cols=90  Identities=16%  Similarity=0.214  Sum_probs=77.1

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|+..+.||+|+||.||++.. ..++.|++|.+....   ......+.+|+.++..++||||+++++.+..+...++|||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            567789999999999999984 457899999986432   2234578899999999999999999999998899999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|...
T Consensus        82 ~~~g~~L~~~l~~~   95 (305)
T cd05609          82 YVEGGDCATLLKNI   95 (305)
T ss_pred             cCCCCcHHHHHHHc
Confidence            99999999999754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.78  E-value=2.7e-08  Score=99.82  Aligned_cols=85  Identities=21%  Similarity=0.273  Sum_probs=70.3

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++.. .+++.||+|.++...   ......+..|..++..+ +||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4689999999999995 457899999986431   22344567788888764 899999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|.+++...
T Consensus        81 g~L~~~l~~~   90 (316)
T cd05619          81 GDLMFHIQSC   90 (316)
T ss_pred             CcHHHHHHHc
Confidence            9999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.78  E-value=2.5e-08  Score=98.22  Aligned_cols=102  Identities=20%  Similarity=0.263  Sum_probs=78.8

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHH-HHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVML-TAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~-l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..+.||+|+||.||++.. .+|+.||+|+++... ......+..|... ++.++|||++++++.+......++++||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            577789999999999999994 468999999986432 2233456667665 5556899999999999988999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++ |+|.+++.........+++.++.
T Consensus        82 ~~-~~l~~~l~~~~~~~~~~~~~~~~  106 (283)
T cd06617          82 MD-TSLDKFYKKVYDKGLTIPEDILG  106 (283)
T ss_pred             hc-ccHHHHHHHhccCCCCCCHHHHH
Confidence            97 69999987654444556665543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.78  E-value=3.4e-08  Score=97.49  Aligned_cols=90  Identities=26%  Similarity=0.337  Sum_probs=77.2

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|++.+.||+|++|.||++.. .+++.+++|.+....  ......+.+|+.++.+++|||++++++.+..+...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            366778999999999999995 568899999986433  23346799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      + +++|.+++....
T Consensus        81 ~-~~~L~~~~~~~~   93 (286)
T cd07832          81 M-PSDLSEVLRDEE   93 (286)
T ss_pred             c-CCCHHHHHHhcC
Confidence            9 999999997543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.78  E-value=2e-08  Score=101.65  Aligned_cols=94  Identities=24%  Similarity=0.424  Sum_probs=77.4

Q ss_pred             HhcCcccceeeeccCCccEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP--------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      ...++++.+.||+|+||.||++...        .+..+|+|.+.... ....+.+.+|+.++.++ +||||+++.+.|..
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            3445788899999999999999731        12368999886432 23456799999999999 89999999999998


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ....++++||+++|+|.++|...+
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~  113 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARR  113 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcC
Confidence            889999999999999999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.78  E-value=2.5e-08  Score=97.00  Aligned_cols=102  Identities=20%  Similarity=0.352  Sum_probs=80.6

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEEEe
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLIYE  540 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  540 (570)
                      |+..+.||.|+||.||++. ..+++.+++|.+...  .....+.+..|+.++++++|+|++++++.+...  ...++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            5667899999999999998 456789999998632  233445788999999999999999999877643  46789999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |+++|+|.+++...+.....+++.+++
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~  108 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFIW  108 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHHH
Confidence            999999999998655444555555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.78  E-value=3.6e-08  Score=97.22  Aligned_cols=101  Identities=28%  Similarity=0.435  Sum_probs=80.6

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|+..+.||+|++|.||+|.. .++..+++|.++... ......+.+|+.++.+++|+|++++.+.+...+..++|+||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            366779999999999999995 458899999986433 233456788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCcccccHhhhh
Q 008332          543 PNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       543 ~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++ +|.+++..... ...+++.+++
T Consensus        81 ~~-~l~~~~~~~~~-~~~~~~~~~~  103 (284)
T cd07836          81 DK-DLKKYMDTHGV-RGALDPNTVK  103 (284)
T ss_pred             Cc-cHHHHHHhcCC-CCCcCHHHHH
Confidence            85 89999875432 2334555443

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.78  E-value=1.5e-08  Score=98.36  Aligned_cols=90  Identities=20%  Similarity=0.256  Sum_probs=77.7

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|+..+.||.|+||.||++... ++..+++|.+....   ....+.+.+|+.++.+++||||+++.+.+......++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            3677899999999999999954 58899999986322   2345679999999999999999999999988889999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++++|.+++...
T Consensus        81 ~~~~~~L~~~l~~~   94 (258)
T cd05578          81 LLLGGDLRYHLSQK   94 (258)
T ss_pred             CCCCCCHHHHHHhc
Confidence            99999999999764

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.78  E-value=3.2e-08  Score=99.94  Aligned_cols=85  Identities=16%  Similarity=0.220  Sum_probs=71.3

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++.. .+++.+|+|.++..   .......+.+|..++.++ +||||+++++++......++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4699999999999994 55789999998642   222345677888888876 899999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|..++...
T Consensus        81 ~~L~~~~~~~   90 (329)
T cd05618          81 GDLMFHMQRQ   90 (329)
T ss_pred             CCHHHHHHHc
Confidence            9999998754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.78  E-value=3.6e-08  Score=95.96  Aligned_cols=90  Identities=29%  Similarity=0.485  Sum_probs=78.4

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..+.||+|+||.||++.. .+++.+++|.++....  ...+.+.+|+.++.+++|+||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            366779999999999999985 4688999999864433  2556899999999999999999999999888999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++++|.++++..
T Consensus        81 ~~~~~L~~~~~~~   93 (264)
T cd06626          81 CSGGTLEELLEHG   93 (264)
T ss_pred             CCCCcHHHHHhhc
Confidence            9999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.78  E-value=2.6e-08  Score=100.26  Aligned_cols=86  Identities=22%  Similarity=0.252  Sum_probs=71.6

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ++||+|+||.||+|.. ..++.+|+|++...   .......+..|..++..+ +||||+++.+++......++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3689999999999995 45789999998642   223345678899888876 899999999999999999999999999


Q ss_pred             CCHHHHHhcCC
Q 008332          545 KSLDCYLFGLS  555 (570)
Q Consensus       545 GsL~~~L~~~~  555 (570)
                      |+|..++...+
T Consensus        81 ~~L~~~l~~~~   91 (321)
T cd05591          81 GDLMFQIQRSR   91 (321)
T ss_pred             CcHHHHHHHcC
Confidence            99999987543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.78  E-value=3.3e-08  Score=97.29  Aligned_cols=87  Identities=24%  Similarity=0.325  Sum_probs=74.5

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|+..++||+|+||.||++. ..+++.+|+|.+... .......+.+|+.++.+++|||++++++.+...+..++|+||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            46677899999999999998 456889999998533 2333457899999999999999999999999999999999999


Q ss_pred             CCCCHHHHH
Q 008332          543 PNKSLDCYL  551 (570)
Q Consensus       543 ~~GsL~~~L  551 (570)
                      ++|+|..+.
T Consensus        82 ~~~~l~~~~   90 (279)
T cd06619          82 DGGSLDVYR   90 (279)
T ss_pred             CCCChHHhh
Confidence            999997653

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.78  E-value=2.4e-08  Score=97.10  Aligned_cols=89  Identities=27%  Similarity=0.372  Sum_probs=75.0

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      +++.+.+.||+|++|.||++....+..+++|.+.... ...+.|.+|+.++.+++|+|++++.+.+. ....+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            4577789999999999999997766789999885432 23467899999999999999999998774 456889999999


Q ss_pred             CCCHHHHHhcC
Q 008332          544 NKSLDCYLFGL  554 (570)
Q Consensus       544 ~GsL~~~L~~~  554 (570)
                      +|+|.+++++.
T Consensus        84 ~~~L~~~~~~~   94 (260)
T cd05069          84 KGSLLDFLKEG   94 (260)
T ss_pred             CCCHHHHHhhC
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.78  E-value=3.1e-08  Score=96.22  Aligned_cols=93  Identities=26%  Similarity=0.422  Sum_probs=72.6

Q ss_pred             eeeccCCccEEEEEec---CCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          471 KLGEGGYGPVYKGVLP---CGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~~---~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .||+|+||.||+|...   .+..||+|.+..... ...+.|.+|+.++.+++||||+++++.+. .+..++|+||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            3899999999999753   345699999864432 33457999999999999999999999875 457899999999999


Q ss_pred             HHHHHhcCCCCcccccHhhhh
Q 008332          547 LDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       547 L~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |.+++...+.   .+++.+++
T Consensus        81 L~~~l~~~~~---~~~~~~~~   98 (257)
T cd05115          81 LNKFLSGKKD---EITVSNVV   98 (257)
T ss_pred             HHHHHHhCCC---CCCHHHHH
Confidence            9999975432   34444443

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.77  E-value=4.5e-08  Score=95.39  Aligned_cols=90  Identities=20%  Similarity=0.362  Sum_probs=78.2

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|++.+.||.|+||.||++.. .++..+++|++.... ....+.+.+|+.+++.++|+|++++.+.+...+..++++|++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   81 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL   81 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence            577789999999999999994 467889999986322 234567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++++|.++++..
T Consensus        82 ~~~~l~~~~~~~   93 (267)
T cd06610          82 SGGSLLDIMKSS   93 (267)
T ss_pred             CCCcHHHHHHHh
Confidence            999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.77  E-value=3.3e-08  Score=95.79  Aligned_cols=89  Identities=38%  Similarity=0.644  Sum_probs=76.5

Q ss_pred             ccceeeeccCCccEEEEEecC-----CcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          467 SIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~~~-----~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++.+.||+|+||.||++....     +..+|+|.+...... ..+.+..|+.++.+++|+||+++++.+......+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456889999999999999542     378999999654433 45689999999999999999999999999899999999


Q ss_pred             cCCCCCHHHHHhcCC
Q 008332          541 YMPNKSLDCYLFGLS  555 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~  555 (570)
                      |+++++|.+++....
T Consensus        82 ~~~~~~l~~~~~~~~   96 (258)
T smart00219       82 YMEGGDLLDYLRKNR   96 (258)
T ss_pred             ccCCCCHHHHHHhhh
Confidence            999999999998643

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.77  E-value=3.7e-08  Score=98.50  Aligned_cols=90  Identities=26%  Similarity=0.406  Sum_probs=75.9

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|...+.||+|+||.||++.. .+++.+|+|.++... ......+.+|+.++.+++||||+++++.+...+..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            4577889999999999999984 457889999986432 22334678999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++ +|.+++...
T Consensus        86 ~~~-~l~~~~~~~   97 (309)
T cd07872          86 LDK-DLKQYMDDC   97 (309)
T ss_pred             CCC-CHHHHHHhc
Confidence            975 899998754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.77  E-value=3.9e-08  Score=98.66  Aligned_cols=100  Identities=23%  Similarity=0.254  Sum_probs=81.6

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +|+..+.||+|++|.||++... .++.+++|.+.....   ...+.+..|+.++..++|+||+++++.+......++|+|
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            5777899999999999999954 588999999864332   234578899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      |+++|+|.+++....  ..+++....
T Consensus        82 ~~~~~~L~~~~~~~~--~~~l~~~~~  105 (316)
T cd05574          82 YCPGGELFRLLQRQP--GKCLSEEVA  105 (316)
T ss_pred             ecCCCCHHHHHHhCC--CCccCHHHH
Confidence            999999999997532  234444433

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.77  E-value=4.2e-08  Score=95.49  Aligned_cols=90  Identities=22%  Similarity=0.281  Sum_probs=78.8

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|+..+.||+|++|.||++... +++.+++|.+..... .....+.+|+..+.+++|+|++++.+.+......++++||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            4677799999999999999954 588999999865433 34568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~l~~~   93 (264)
T cd06623          82 DGGSLADLLKKV   93 (264)
T ss_pred             CCCcHHHHHHHc
Confidence            999999999854

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.77  E-value=3.1e-08  Score=96.11  Aligned_cols=98  Identities=36%  Similarity=0.561  Sum_probs=79.6

Q ss_pred             eeeeccCCccEEEEEecC----CcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++....    +..+++|.+...... ..+.+.+|+.++..++|+|++++++.+......++++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            468999999999999543    778999999754332 357899999999999999999999999998899999999999


Q ss_pred             CCHHHHHhcCCCC-----cccccHhhhh
Q 008332          545 KSLDCYLFGLSHQ-----KTYFGLEKTC  567 (570)
Q Consensus       545 GsL~~~L~~~~~~-----~~~~~~~~~~  567 (570)
                      |+|.+++......     ...+++.+++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~  108 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLL  108 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHH
Confidence            9999999875322     2445555443

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.77  E-value=3.1e-08  Score=97.44  Aligned_cols=83  Identities=22%  Similarity=0.295  Sum_probs=69.6

Q ss_pred             eeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          472 LGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       472 lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      ||+|+||.||++.. .+|+.+|+|.+....   ......+..|+.++.+++||||+++.+.+......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999984 568899999985321   12234566799999999999999999999988999999999999999


Q ss_pred             HHHHhcC
Q 008332          548 DCYLFGL  554 (570)
Q Consensus       548 ~~~L~~~  554 (570)
                      .+++...
T Consensus        81 ~~~~~~~   87 (277)
T cd05607          81 KYHIYNV   87 (277)
T ss_pred             HHHHHhc
Confidence            9998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.77  E-value=2.7e-08  Score=100.02  Aligned_cols=86  Identities=21%  Similarity=0.263  Sum_probs=71.8

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++.. .+++.||+|.++..   .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999995 45789999998632   223345678888888876 799999999999999999999999999


Q ss_pred             CCHHHHHhcCC
Q 008332          545 KSLDCYLFGLS  555 (570)
Q Consensus       545 GsL~~~L~~~~  555 (570)
                      |+|.+++...+
T Consensus        81 g~L~~~i~~~~   91 (320)
T cd05590          81 GDLMFHIQKSR   91 (320)
T ss_pred             chHHHHHHHcC
Confidence            99999997643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.76  E-value=3.3e-08  Score=98.33  Aligned_cols=92  Identities=28%  Similarity=0.468  Sum_probs=76.1

Q ss_pred             cCcccceeeeccCCccEEEEEecC-Cc--EEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC-GE--VIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~-~~--~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++|+..++||+|+||.||++.... +.  .+++|.++.. .....+.|.+|+.++.++ +||||+++.+.+......+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            357778999999999999998643 33  4788888642 233446789999999999 799999999999888889999


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      +||+++|+|.++|++..
T Consensus        82 ~e~~~~~~L~~~l~~~~   98 (297)
T cd05089          82 IEYAPYGNLLDFLRKSR   98 (297)
T ss_pred             EEecCCCcHHHHHHhcc
Confidence            99999999999998643

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.76  E-value=4e-08  Score=95.85  Aligned_cols=91  Identities=23%  Similarity=0.370  Sum_probs=74.6

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-----cccHHHHHHHHHHHHccCCCCccceeEEEEeC--Cee
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-----TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EER  535 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-----~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~  535 (570)
                      .+|++.+.||+|+||.||++.. .++..|++|.+....     ....+.+.+|+.++.+++||||+++.+++...  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4577889999999999999984 558899999885221     12245788999999999999999999987654  357


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++++||+++|+|.+++...
T Consensus        82 ~~v~e~~~~~~L~~~l~~~  100 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY  100 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc
Confidence            8999999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.76  E-value=4.1e-08  Score=95.58  Aligned_cols=91  Identities=26%  Similarity=0.407  Sum_probs=77.6

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc-----ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST-----QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~-----~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ++|.+.+.||+|++|.||++.. .+++.+++|.++....     .....+.+|+.++.+++||||+++++.+......++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            4577889999999999999984 5688999998853221     123568899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ++||+++++|.+++...
T Consensus        82 v~e~~~~~~l~~~~~~~   98 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY   98 (263)
T ss_pred             EEEECCCCcHHHHHHHh
Confidence            99999999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.76  E-value=5.5e-08  Score=95.95  Aligned_cols=88  Identities=32%  Similarity=0.504  Sum_probs=74.8

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      |+..+.||+|++|.||++.. .+++.+++|.++...  ......+.+|+.++.+++|||++++.+.+..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            56678999999999999995 468899999986332  223457889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      + |+|.+++...
T Consensus        82 ~-~~l~~~~~~~   92 (285)
T cd07861          82 S-MDLKKYLDSL   92 (285)
T ss_pred             C-CCHHHHHhcC
Confidence            7 6999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.76  E-value=3.3e-08  Score=99.30  Aligned_cols=85  Identities=24%  Similarity=0.266  Sum_probs=71.5

Q ss_pred             eeeeccCCccEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++... +++.+|+|.++...   ......+..|..++..+ +||||+++.+++......++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46899999999999854 57899999986422   23345678898988887 799999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|..++...
T Consensus        81 ~~L~~~~~~~   90 (318)
T cd05570          81 GDLMFHIQRS   90 (318)
T ss_pred             CCHHHHHHHc
Confidence            9999998754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.75  E-value=1.6e-08  Score=102.41  Aligned_cols=94  Identities=24%  Similarity=0.480  Sum_probs=76.2

Q ss_pred             HhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeC-
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS-  532 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~-  532 (570)
                      +.++|++.+.||+|+||.||++..      ..++.||+|.++... ....+.+.+|+.++.++ +|+||+++++.|... 
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            445788899999999999999963      224689999986432 23345688999999999 899999999988755 


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ...++++||+++|+|.++|+...
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~  107 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKR  107 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhcc
Confidence            46889999999999999997543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.75  E-value=2.2e-08  Score=97.98  Aligned_cols=90  Identities=24%  Similarity=0.447  Sum_probs=74.3

Q ss_pred             cCcccceeeeccCCccEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++.+.+.||+|+||.||+|....    ...|++|...... ....+.|.+|+.++.+++|||++++++.+.. +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            457778999999999999998532    2468999886443 3445679999999999999999999998864 567899


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      +||+++|+|.+++...
T Consensus        85 ~e~~~~~~L~~~l~~~  100 (270)
T cd05056          85 MELAPLGELRSYLQVN  100 (270)
T ss_pred             EEcCCCCcHHHHHHhC
Confidence            9999999999999764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.75  E-value=4e-08  Score=99.02  Aligned_cols=90  Identities=20%  Similarity=0.199  Sum_probs=73.7

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCC-CccceeEEEEeCCeeEEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHV-NLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~-niv~l~g~~~~~~~~~lv~  539 (570)
                      +|.+.+.||+|+||.||++.. ..++.||+|++...   .....+.+..|..++..++|+ +|+++.+++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            366789999999999999995 45779999998632   223345688899999999764 5788888888888999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus        81 E~~~~g~L~~~~~~~   95 (324)
T cd05587          81 EYVNGGDLMYHIQQV   95 (324)
T ss_pred             cCCCCCcHHHHHHHc
Confidence            999999999999754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.75  E-value=4.7e-08  Score=97.37  Aligned_cols=90  Identities=29%  Similarity=0.433  Sum_probs=76.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|...+.||+|+||.||++.. .+++.||+|.++... ......+.+|+.++.+++||||+++++++......++|+||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            4577889999999999999984 457899999986332 23345678999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      ++ ++|.+++...
T Consensus        86 ~~-~~l~~~l~~~   97 (301)
T cd07873          86 LD-KDLKQYLDDC   97 (301)
T ss_pred             cc-cCHHHHHHhc
Confidence            97 5999998764

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.75  E-value=4.4e-08  Score=96.80  Aligned_cols=100  Identities=24%  Similarity=0.330  Sum_probs=83.1

Q ss_pred             hcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ...|...+.||+|.+|.||++... .++.+++|.+..... ....+.+|+.++.+++|+|++++.+.+......++++||
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   96 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY   96 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence            445667789999999999999964 588999999965433 456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      +++++|.+++....   ..+++.++
T Consensus        97 ~~~~~L~~~l~~~~---~~l~~~~~  118 (286)
T cd06614          97 MDGGSLTDIITQNF---VRMNEPQI  118 (286)
T ss_pred             cCCCcHHHHHHHhc---cCCCHHHH
Confidence            99999999998753   23444443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.75  E-value=5.1e-08  Score=95.14  Aligned_cols=89  Identities=29%  Similarity=0.544  Sum_probs=74.8

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcc---------cHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQ---------GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~---------~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      +.+...||+|++|.||+|.. ..++.+++|.+......         ..+.+.+|+.++.+++||||+++.+.+......
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            45668999999999999984 45789999988532211         124688999999999999999999999999999


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++++||+++++|.+++...
T Consensus        82 ~lv~e~~~~~~L~~~l~~~  100 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY  100 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc
Confidence            9999999999999999754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.75  E-value=2.5e-08  Score=96.83  Aligned_cols=87  Identities=33%  Similarity=0.569  Sum_probs=74.3

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccH--HHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~--~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      |++.+.||+|+||.||++.. .+++.+|+|.+........  ....+|+.++.+++||||+++.+.+......+++|||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            35678999999999999995 4566899999975543322  23456999999999999999999999999999999999


Q ss_pred             CCCCHHHHHh
Q 008332          543 PNKSLDCYLF  552 (570)
Q Consensus       543 ~~GsL~~~L~  552 (570)
                      ++++|.++|.
T Consensus        81 ~~~~L~~~l~   90 (260)
T PF00069_consen   81 PGGSLQDYLQ   90 (260)
T ss_dssp             TTEBHHHHHH
T ss_pred             cccccccccc
Confidence            9999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.75  E-value=4.3e-08  Score=94.73  Aligned_cols=85  Identities=29%  Similarity=0.537  Sum_probs=74.6

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCHH
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD  548 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL~  548 (570)
                      +.||+|+||.||++....++.|++|.+...... ....|.+|+.++.+++|+||+++++.+......++|+||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            368999999999999766899999998644332 4567999999999999999999999999999999999999999999


Q ss_pred             HHHhcC
Q 008332          549 CYLFGL  554 (570)
Q Consensus       549 ~~L~~~  554 (570)
                      +++++.
T Consensus        81 ~~l~~~   86 (251)
T cd05041          81 TFLRKK   86 (251)
T ss_pred             HHHHhc
Confidence            999764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.75  E-value=4.4e-08  Score=95.89  Aligned_cols=86  Identities=29%  Similarity=0.482  Sum_probs=71.9

Q ss_pred             eeeeccCCccEEEEEec-CCc--EEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVLP-CGE--VIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~-~~~--~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ++||+|+||.||++... ++.  .+++|.+.... ......+.+|+.++.++ +||||+++++.+......+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            36899999999999964 343  47888886432 33456788999999999 899999999999988899999999999


Q ss_pred             CCHHHHHhcCC
Q 008332          545 KSLDCYLFGLS  555 (570)
Q Consensus       545 GsL~~~L~~~~  555 (570)
                      |+|.++|++.+
T Consensus        81 ~~L~~~i~~~~   91 (270)
T cd05047          81 GNLLDFLRKSR   91 (270)
T ss_pred             CcHHHHHHhcc
Confidence            99999998654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.75  E-value=4.7e-08  Score=96.00  Aligned_cols=88  Identities=25%  Similarity=0.484  Sum_probs=75.5

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccC---CCCccceeEEEEeCCeeEEEEe
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQ---HVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~---h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      |+..+.||+|+||.||+|.. .+++.+++|.+... .......+.+|+.++.+++   |||++++.+.+......+++||
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            55668899999999999994 56889999998643 3334567889999999986   9999999999998889999999


Q ss_pred             cCCCCCHHHHHhc
Q 008332          541 YMPNKSLDCYLFG  553 (570)
Q Consensus       541 ~~~~GsL~~~L~~  553 (570)
                      |+++++|.++++.
T Consensus        83 ~~~~~~L~~~~~~   95 (277)
T cd06917          83 YAEGGSVRTLMKA   95 (277)
T ss_pred             cCCCCcHHHHHHc
Confidence            9999999999875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.75  E-value=4.1e-08  Score=98.92  Aligned_cols=89  Identities=20%  Similarity=0.207  Sum_probs=72.7

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeEEEEe
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      |...+.||+|+||.||++.. .+++.||+|.+...   .....+.+..|..++..+. |++|+++.+++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            55678999999999999984 56889999998632   1233456788999888885 5778889888888889999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus        82 y~~~g~L~~~i~~~   95 (323)
T cd05615          82 YVNGGDLMYHIQQV   95 (323)
T ss_pred             CCCCCcHHHHHHHc
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.74  E-value=2.8e-09  Score=99.26  Aligned_cols=89  Identities=25%  Similarity=0.438  Sum_probs=78.7

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      |.+.+.||+|++|.||++. ...|+.+|+|.++-  ....++...|+.+|.+.+.|++|+.+|.+.....++||||||-.
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            5567899999999999998 56799999999853  24567899999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCC
Q 008332          545 KSLDCYLFGLSH  556 (570)
Q Consensus       545 GsL~~~L~~~~~  556 (570)
                      |+..+.++-++.
T Consensus       113 GSiSDI~R~R~K  124 (502)
T KOG0574|consen  113 GSISDIMRARRK  124 (502)
T ss_pred             CcHHHHHHHhcC
Confidence            999999986544

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.74  E-value=6.9e-09  Score=89.63  Aligned_cols=87  Identities=24%  Similarity=0.426  Sum_probs=72.2

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +...+.||+|.+|+|++++ .++++.||.|+.+..  ...-....++|+.++++++|.|||+++.+......+-+|+|||
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            3445789999999999999 667889999998632  2223456889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 008332          543 PNKSLDCYLFG  553 (570)
Q Consensus       543 ~~GsL~~~L~~  553 (570)
                      .. +|..|...
T Consensus        84 dq-dlkkyfds   93 (292)
T KOG0662|consen   84 DQ-DLKKYFDS   93 (292)
T ss_pred             hH-HHHHHHHh
Confidence            65 78777654

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.74  E-value=3.7e-08  Score=96.27  Aligned_cols=100  Identities=20%  Similarity=0.406  Sum_probs=77.7

Q ss_pred             cccceeeeccCCccEEEEEecC--CcEEEEEEecCCC----------cccHHHHHHHHHHHHc-cCCCCccceeEEEEeC
Q 008332          466 FSIRNKLGEGGYGPVYKGVLPC--GEVIAVKKLSKTS----------TQGFEEFKNEVMLTAK-LQHVNLIRVLGFCIDS  532 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~~--~~~vavK~l~~~~----------~~~~~~f~~e~~~l~~-l~h~niv~l~g~~~~~  532 (570)
                      |+..+.||+|+||.||++....  ++.+|+|.+....          ......+.+|+.++.+ ++||||+++++.+...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5667899999999999999643  6789999875221          1223467788888875 6999999999999999


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCCCCcccccHhh
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      ...++++||+++++|.+++...+.....++..+
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~  114 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEER  114 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHH
Confidence            999999999999999999865333334455443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.74  E-value=5.2e-08  Score=96.48  Aligned_cols=90  Identities=27%  Similarity=0.441  Sum_probs=75.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|+..+.||+|++|.||++.. .+++.+++|.+..... .....+.+|+.++.+++|+||+++.+++......++|+||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            4577789999999999999995 4678999999864322 2234577899999999999999999999988999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++ +|.+++...
T Consensus        85 ~~~-~L~~~~~~~   96 (291)
T cd07844          85 LDT-DLKQYMDDC   96 (291)
T ss_pred             CCC-CHHHHHHhC
Confidence            984 999998754

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.74  E-value=3.7e-08  Score=95.41  Aligned_cols=89  Identities=26%  Similarity=0.448  Sum_probs=78.0

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ++|+..+.||+|+||.||++... +++.+++|.+.....  .+.+.+|+.++++++|+|++++.+.+......++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            45777889999999999999964 478999999854322  578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++++|.+++...
T Consensus        81 ~~~~L~~~l~~~   92 (256)
T cd06612          81 GAGSVSDIMKIT   92 (256)
T ss_pred             CCCcHHHHHHhC
Confidence            999999999753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.74  E-value=5.7e-08  Score=95.78  Aligned_cols=88  Identities=33%  Similarity=0.491  Sum_probs=72.5

Q ss_pred             cccceeeeccCCccEEEEEe-----cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERML  537 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  537 (570)
                      ++..+.||+|+||.||.+.+     .+++.||+|.++... ......|.+|+.++.+++||||+++.+.+...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            36678999999999988653     357789999986432 23456789999999999999999999988654  35789


Q ss_pred             EEecCCCCCHHHHHhc
Q 008332          538 IYEYMPNKSLDCYLFG  553 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~  553 (570)
                      +|||+++|+|.+++.+
T Consensus        86 v~e~~~~~~l~~~~~~  101 (283)
T cd05080          86 IMEYVPLGSLRDYLPK  101 (283)
T ss_pred             EecCCCCCCHHHHHHH
Confidence            9999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.74  E-value=4.2e-08  Score=98.50  Aligned_cols=85  Identities=24%  Similarity=0.271  Sum_probs=69.1

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ++||+|+||.||++.. .+++.||+|.++..   .....+.+..|..++... +||||+++++.+......++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999995 45788999998632   122334566677777654 899999999999989999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|..++...
T Consensus        81 g~L~~~~~~~   90 (316)
T cd05592          81 GDLMFHIQSS   90 (316)
T ss_pred             CcHHHHHHHc
Confidence            9999999754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.74  E-value=3.3e-08  Score=96.80  Aligned_cols=103  Identities=27%  Similarity=0.371  Sum_probs=81.9

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCC------
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSE------  533 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~------  533 (570)
                      +.++|++.+.||+|++|.||++.. ..++.+++|.+..... ..+.+.+|+.++.++ +|+||+++++.+....      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            456788899999999999999995 4578899999864332 346789999999999 7999999999987654      


Q ss_pred             eeEEEEecCCCCCHHHHHhcCCCCcccccHhh
Q 008332          534 ERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      ..++|+||+++++|.+++...+.....++..+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~  114 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEW  114 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHH
Confidence            48999999999999999876443334444443

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.74  E-value=1.9e-08  Score=98.85  Aligned_cols=88  Identities=24%  Similarity=0.418  Sum_probs=75.3

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      |+..+.||+|+||.||+|.. ..+..||+|.+.... ....+.+.+|+.++.+++||||+++.+.+......++|+||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            45567899999999999984 457789999986332 3344678999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhc
Q 008332          544 NKSLDCYLFG  553 (570)
Q Consensus       544 ~GsL~~~L~~  553 (570)
                      +|+|.+++..
T Consensus        86 ~~~L~~~~~~   95 (277)
T cd06642          86 GGSALDLLKP   95 (277)
T ss_pred             CCcHHHHhhc
Confidence            9999999864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.74  E-value=3.6e-08  Score=96.55  Aligned_cols=93  Identities=27%  Similarity=0.423  Sum_probs=76.0

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeC------C
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS------E  533 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~------~  533 (570)
                      +...|...+.||+|+||.||+|.. ..++.+|+|.+.... .....+.+|+.++.++ +|+|++++.+.+...      .
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            345577778999999999999984 457899999985432 3345788999999998 799999999998753      3


Q ss_pred             eeEEEEecCCCCCHHHHHhcCC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ..++++||+++|+|.+++...+
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~  104 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTK  104 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhcc
Confidence            5789999999999999998643

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.74  E-value=4.8e-08  Score=95.66  Aligned_cols=100  Identities=24%  Similarity=0.501  Sum_probs=75.2

Q ss_pred             ccceeeeccCCccEEEEEecC-Cc--EEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC------Cee
Q 008332          467 SIRNKLGEGGYGPVYKGVLPC-GE--VIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------EER  535 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~~~-~~--~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------~~~  535 (570)
                      .+.+.||+|+||.||+|.... +.  .+|+|.++..  .....+.|.+|+.++.+++|+||+++++.|...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456889999999999999643 33  5899988643  233456789999999999999999999988543      246


Q ss_pred             EEEEecCCCCCHHHHHhcCCC--CcccccHhhh
Q 008332          536 MLIYEYMPNKSLDCYLFGLSH--QKTYFGLEKT  566 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~--~~~~~~~~~~  566 (570)
                      ++++||+++|+|.+++...+.  ....+++.++
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~  114 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQML  114 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHH
Confidence            899999999999999864332  2233455444

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.74  E-value=4.4e-08  Score=98.79  Aligned_cols=85  Identities=20%  Similarity=0.223  Sum_probs=68.9

Q ss_pred             eeeeccCCccEEEEE-ecCCcEEEEEEecCC---CcccHHHHHHHHH-HHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVM-LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~---~~~~~~~f~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++. ..+|+.+|+|++...   .......+..|.. ++..++||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            468999999999998 456889999998532   1223345566655 46778999999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|..++...
T Consensus        81 ~~L~~~l~~~   90 (325)
T cd05604          81 GELFFHLQRE   90 (325)
T ss_pred             CCHHHHHHHc
Confidence            9999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.73  E-value=5.1e-08  Score=98.83  Aligned_cols=89  Identities=21%  Similarity=0.433  Sum_probs=72.6

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----eeE
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----ERM  536 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~  536 (570)
                      +|++.+.||+|+||.||++. ..+++.||+|.+...  .......+.+|+.++.+++||||+++.+++....     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            36778999999999999999 456889999998632  2223456889999999999999999999886542     479


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +||||+. ++|.+++...
T Consensus        81 lv~e~~~-~~L~~~l~~~   97 (338)
T cd07859          81 VVFELME-SDLHQVIKAN   97 (338)
T ss_pred             EEEecCC-CCHHHHHHhc
Confidence            9999996 6999998753

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.73  E-value=7.8e-09  Score=99.46  Aligned_cols=84  Identities=30%  Similarity=0.469  Sum_probs=67.0

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----eeEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----ERMLI  538 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~lv  538 (570)
                      .+...+++|.|+||.||+|.+ .+++.||||+.-....-    --+|+.+|+.++|||||+|+-.+....     ...+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            355668999999999999995 45789999987433221    137899999999999999998876542     23589


Q ss_pred             EecCCCCCHHHHHhc
Q 008332          539 YEYMPNKSLDCYLFG  553 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~  553 (570)
                      |||||. +|.++++.
T Consensus       101 leymP~-tL~~~~r~  114 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRH  114 (364)
T ss_pred             HHhchH-HHHHHHHH
Confidence            999998 99999984

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.73  E-value=3.5e-08  Score=96.13  Aligned_cols=90  Identities=22%  Similarity=0.271  Sum_probs=77.8

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +|+..+.||+|++|.||++... .++.+++|.+.... ......+.+|+.++.+++||||+++.+.+......++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            4566688999999999999954 58899999986443 344567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~~~~~   93 (265)
T cd06605          82 DGGSLDKILKEV   93 (265)
T ss_pred             CCCcHHHHHHHc
Confidence            999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=4.1e-09  Score=103.40  Aligned_cols=90  Identities=20%  Similarity=0.351  Sum_probs=79.0

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEec-CCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~-~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .|...++||+|+||.||+|. -..++.||+|.+. .......++..+|+.++.+++++||.+.+|.+..+..++++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            35566899999999999999 4568899999996 344455678899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      .+|++.+.|...
T Consensus        94 ~gGsv~~lL~~~  105 (467)
T KOG0201|consen   94 GGGSVLDLLKSG  105 (467)
T ss_pred             cCcchhhhhccC
Confidence            999999999853

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.72  E-value=5.4e-08  Score=98.05  Aligned_cols=85  Identities=20%  Similarity=0.242  Sum_probs=68.8

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHH-HHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVM-LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++.. .+++.||+|.+....   ......+..|.. ++..++||||+++.+.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4689999999999995 468899999986321   122344555554 56778999999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|..++...
T Consensus        81 g~L~~~l~~~   90 (323)
T cd05575          81 GELFFHLQRE   90 (323)
T ss_pred             CCHHHHHHhc
Confidence            9999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.72  E-value=1.8e-08  Score=98.42  Aligned_cols=85  Identities=35%  Similarity=0.561  Sum_probs=71.7

Q ss_pred             eeeeccCCccEEEEEecC-------CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          470 NKLGEGGYGPVYKGVLPC-------GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~-------~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +.||+|+||.||+|...+       ++.+++|.+.... ......|.+|+.+++.++||||+++++.+......++++||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998532       2578999885432 23456799999999999999999999999988899999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.++|+..
T Consensus        81 ~~~~~L~~~l~~~   93 (269)
T cd05044          81 MEGGDLLSYLRDA   93 (269)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999999854

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.72  E-value=2.8e-08  Score=98.05  Aligned_cols=89  Identities=22%  Similarity=0.354  Sum_probs=75.6

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..+.||+|+||.||++... .++.+|+|.+.....  ...+.+.+|+.++..++||||+++.+++......++|+||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            4677799999999999999964 588999998853222  2345688999999999999999999999988999999999


Q ss_pred             CCCCCHHHHHhc
Q 008332          542 MPNKSLDCYLFG  553 (570)
Q Consensus       542 ~~~GsL~~~L~~  553 (570)
                      +++++|.++.+.
T Consensus        82 ~~~~~l~~~~~~   93 (286)
T cd07846          82 VDHTVLDDLEKY   93 (286)
T ss_pred             CCccHHHHHHhc
Confidence            999999887764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.72  E-value=6.4e-08  Score=97.48  Aligned_cols=90  Identities=20%  Similarity=0.200  Sum_probs=73.4

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      +|...+.||+|+||.||++.. .+++.+|+|.+....   ......+..|..++..+ +|++|+++.+++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            366779999999999999984 457799999986422   22234567788888777 6899999999999889999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus        81 E~~~~g~L~~~~~~~   95 (323)
T cd05616          81 EYVNGGDLMYQIQQV   95 (323)
T ss_pred             cCCCCCCHHHHHHHc
Confidence            999999999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.72  E-value=2.8e-08  Score=98.45  Aligned_cols=89  Identities=22%  Similarity=0.417  Sum_probs=72.3

Q ss_pred             HHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc--------------ccHHHHHHHHHHHHccCCCCccce
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST--------------QGFEEFKNEVMLTAKLQHVNLIRV  525 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~--------------~~~~~f~~e~~~l~~l~h~niv~l  525 (570)
                      ...+.|.+.+.||+|.||.|-++. ..+++.+|+|++.+...              ...+...+|+.+|++++|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            344668889999999999999999 56688999999853210              112468899999999999999999


Q ss_pred             eEEEEeC--CeeEEEEecCCCCCHHH
Q 008332          526 LGFCIDS--EERMLIYEYMPNKSLDC  549 (570)
Q Consensus       526 ~g~~~~~--~~~~lv~e~~~~GsL~~  549 (570)
                      +.+..++  +.+|||+|||..|.+..
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w  199 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKW  199 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCcccc
Confidence            9988765  47899999999987653

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.72  E-value=7e-08  Score=95.21  Aligned_cols=89  Identities=24%  Similarity=0.399  Sum_probs=75.5

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..+.||+|++|.||++... +++.+++|++....  ....+.+.+|+.++.+++|+|++++++.+......++|+||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            5677789999999999999954 58899999985332  22335688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhc
Q 008332          542 MPNKSLDCYLFG  553 (570)
Q Consensus       542 ~~~GsL~~~L~~  553 (570)
                      ++++.|..++..
T Consensus        82 ~~~~~l~~~~~~   93 (286)
T cd07847          82 CDHTVLNELEKN   93 (286)
T ss_pred             cCccHHHHHHhC
Confidence            999988888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.71  E-value=6.4e-08  Score=97.66  Aligned_cols=85  Identities=16%  Similarity=0.205  Sum_probs=71.6

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++.. .+++.+|+|+++...   ....+.+.+|..++.++ +||||+++.+++......++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999994 557899999996432   22345688999999888 699999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|..++...
T Consensus        81 ~~L~~~~~~~   90 (327)
T cd05617          81 GDLMFHMQRQ   90 (327)
T ss_pred             CcHHHHHHHc
Confidence            9999988753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.71  E-value=6.2e-08  Score=95.25  Aligned_cols=84  Identities=23%  Similarity=0.351  Sum_probs=71.2

Q ss_pred             eeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          472 LGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       472 lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      ||+|+||.||++.. .+++.+++|.+....   ......+..|+.++..++|||++++.+.+...+..++|+||+++|+|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999984 468899999986322   12234678899999999999999999999988999999999999999


Q ss_pred             HHHHhcCC
Q 008332          548 DCYLFGLS  555 (570)
Q Consensus       548 ~~~L~~~~  555 (570)
                      .+++.+..
T Consensus        81 ~~~l~~~~   88 (277)
T cd05577          81 KYHIYNVG   88 (277)
T ss_pred             HHHHHHcC
Confidence            99998644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.71  E-value=1.5e-08  Score=101.10  Aligned_cols=90  Identities=24%  Similarity=0.303  Sum_probs=77.4

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcc--cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQ--GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~--~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      |.+.+.||+|.|+.|-.++ .-+|..||||++.+....  ....+.+|+++|+-++|||||+|+.+...+.-+|||+|+-
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG   99 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG   99 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence            5667899999999998887 445999999999754433  3356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC
Q 008332          543 PNKSLDCYLFGLS  555 (570)
Q Consensus       543 ~~GsL~~~L~~~~  555 (570)
                      .+|+|++||-+..
T Consensus       100 D~GDl~DyImKHe  112 (864)
T KOG4717|consen  100 DGGDLFDYIMKHE  112 (864)
T ss_pred             CCchHHHHHHhhh
Confidence            9999999998654

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.70  E-value=8.5e-08  Score=97.01  Aligned_cols=90  Identities=22%  Similarity=0.309  Sum_probs=74.9

Q ss_pred             CcccceeeeccCCccEEEEEe----cCCcEEEEEEecCCC----cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCee
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTS----TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~----~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~  535 (570)
                      +|.+.+.||+|+||.||++..    ..++.+|+|.+....    ....+.+..|+.++..+ +|+||+++.+.+......
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            366789999999999999874    357899999985321    12234678899999999 599999999999888899


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++||||+++|+|.+++...
T Consensus        81 ~lv~e~~~~g~L~~~l~~~   99 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQR   99 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHc
Confidence            9999999999999999754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.70  E-value=7.7e-08  Score=106.17  Aligned_cols=91  Identities=20%  Similarity=0.259  Sum_probs=78.3

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|.+.+.||+|+||.||+|... .++.||+|+++...   ......+.+|+.++..++||||+++++.+......+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            46788899999999999999954 68899999986432   222357889999999999999999999999899999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|+..
T Consensus        84 Ey~~g~~L~~li~~~   98 (669)
T cd05610          84 EYLIGGDVKSLLHIY   98 (669)
T ss_pred             eCCCCCCHHHHHHhc
Confidence            999999999999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.70  E-value=1.1e-07  Score=91.94  Aligned_cols=89  Identities=27%  Similarity=0.525  Sum_probs=77.5

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      |++.+.||+|.+|.||++.. ..++.+++|.+.....  ...+.+.+|+.++.+++|+|++++.+.+......++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            56678999999999999984 4578999999965433  34567999999999999999999999999889999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~~~~~   93 (254)
T cd06627          82 ENGSLRQIIKKF   93 (254)
T ss_pred             CCCcHHHHHHhc
Confidence            999999999754

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.70  E-value=5.3e-08  Score=95.98  Aligned_cols=88  Identities=32%  Similarity=0.542  Sum_probs=74.7

Q ss_pred             cccceeeeccCCccEEEEEec------CCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +.+.+.||+|+||.||+|...      .++.||+|++..... ...+.|.+|+.++..++||||+++++.+...+..+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            566788999999999999842      246899999964332 2345688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhc
Q 008332          539 YEYMPNKSLDCYLFG  553 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~  553 (570)
                      +||+++++|.+++..
T Consensus        87 ~e~~~~~~l~~~l~~  101 (283)
T cd05091          87 FSYCSHSDLHEFLVM  101 (283)
T ss_pred             EEcCCCCcHHHHHHh
Confidence            999999999999964

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.69  E-value=3.4e-08  Score=97.93  Aligned_cols=87  Identities=24%  Similarity=0.309  Sum_probs=75.0

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      .....||+|+||.||++.. .++..+|+|.+........+.+.+|+.++..++|+|++++++.+...+..++|+||++++
T Consensus        25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~  104 (292)
T cd06658          25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG  104 (292)
T ss_pred             hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence            3346799999999999984 458899999986544444567899999999999999999999999999999999999999


Q ss_pred             CHHHHHhc
Q 008332          546 SLDCYLFG  553 (570)
Q Consensus       546 sL~~~L~~  553 (570)
                      +|.+++..
T Consensus       105 ~L~~~~~~  112 (292)
T cd06658         105 ALTDIVTH  112 (292)
T ss_pred             cHHHHHhc
Confidence            99999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.69  E-value=9.9e-08  Score=92.31  Aligned_cols=89  Identities=28%  Similarity=0.483  Sum_probs=77.2

Q ss_pred             cccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEEEe
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLIYE  540 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  540 (570)
                      |+..+.||+|++|.||+|... ++..+++|.+.....  ...+.+.+|+.++.+++|+||+++.+.+...  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            566789999999999999954 688999999864332  3456799999999999999999999999888  78999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++++|.+++.+.
T Consensus        82 ~~~~~~L~~~~~~~   95 (260)
T cd06606          82 YVSGGSLSSLLKKF   95 (260)
T ss_pred             ecCCCcHHHHHHHc
Confidence            99999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.69  E-value=2.1e-08  Score=103.76  Aligned_cols=93  Identities=22%  Similarity=0.305  Sum_probs=76.9

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~  534 (570)
                      ....++|.+..+||+|+||+|+.+.+ .+++..|||++++..   ..+.+..+.|.+++.-. +||.+++|+.++.+.++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            33456789999999999999999995 567899999997543   34566778888888777 69999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHh
Q 008332          535 RMLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~  552 (570)
                      ++.||||+.+|++..+.+
T Consensus       444 l~fvmey~~Ggdm~~~~~  461 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIH  461 (694)
T ss_pred             EEEEEEecCCCcEEEEEe
Confidence            999999999999554443

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.69  E-value=5.7e-09  Score=105.62  Aligned_cols=100  Identities=25%  Similarity=0.351  Sum_probs=79.6

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      |..++.||.|+||.||-++ ..+.+.||||.+.-...   ..+++.+.|+..+.+++|||.+...|++......||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            5556889999999999998 56688999999964443   3456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      | -||-.+.|.-.+..-.-+.++-+
T Consensus       108 C-lGSAsDlleVhkKplqEvEIAAi  131 (948)
T KOG0577|consen  108 C-LGSASDLLEVHKKPLQEVEIAAI  131 (948)
T ss_pred             H-hccHHHHHHHHhccchHHHHHHH
Confidence            9 45888877654444444444433

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.69  E-value=3.8e-08  Score=95.31  Aligned_cols=101  Identities=26%  Similarity=0.390  Sum_probs=81.3

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|++.+.||+|++|.||++. ..+++.+++|.+....  ......+.+|+.++++++|+||+++.+.+......++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            36677899999999999998 4567899999986432  23345788999999999999999999999888999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      +++++|.+++.+.......+++.+
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~  104 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQE  104 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHH
Confidence            999999999986433333444443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.68  E-value=7.2e-08  Score=97.02  Aligned_cols=85  Identities=22%  Similarity=0.250  Sum_probs=68.7

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHH-HHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVM-LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ++||+|+||.||++.. .+++.+|+|.+....   ......+..|.. ++..++||||+++.+.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999995 558899999985321   122344556654 57788999999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|..++...
T Consensus        81 ~~L~~~l~~~   90 (321)
T cd05603          81 GELFFHLQRE   90 (321)
T ss_pred             CCHHHHHHHc
Confidence            9999988753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.68  E-value=1.1e-07  Score=92.32  Aligned_cols=89  Identities=27%  Similarity=0.475  Sum_probs=75.0

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEe-CCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID-SEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e~~  542 (570)
                      .++++.+.||+|+||.||++... +..+++|.++..  ...+.|.+|+.++.+++|+|++++.+.+.. ....++++||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            45777899999999999999865 788999998532  234578999999999999999999998654 45689999999


Q ss_pred             CCCCHHHHHhcCC
Q 008332          543 PNKSLDCYLFGLS  555 (570)
Q Consensus       543 ~~GsL~~~L~~~~  555 (570)
                      ++|+|.+++++..
T Consensus        83 ~~~~L~~~~~~~~   95 (256)
T cd05082          83 AKGSLVDYLRSRG   95 (256)
T ss_pred             CCCcHHHHHHhcC
Confidence            9999999998643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.68  E-value=6.2e-08  Score=99.66  Aligned_cols=88  Identities=18%  Similarity=0.269  Sum_probs=73.4

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----eeEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----ERML  537 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~l  537 (570)
                      |++.+.||+|+||.||++.. .+++.||+|.+...  .....+.+.+|+.++..++|+||+++++++....     ..++
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            66779999999999999994 56899999998643  2233457889999999999999999999988766     7899


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      |+||+. ++|.+++...
T Consensus        82 v~e~~~-~~l~~~~~~~   97 (372)
T cd07853          82 VTELMQ-SDLHKIIVSP   97 (372)
T ss_pred             Eeeccc-cCHHHHHhcC
Confidence            999997 5898888653

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.68  E-value=7.7e-08  Score=96.56  Aligned_cols=85  Identities=24%  Similarity=0.241  Sum_probs=70.3

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++.. .+++.||+|.++...   ......+..|..++... +||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4699999999999995 458899999986421   22344567788887764 899999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|.+++...
T Consensus        81 g~L~~~i~~~   90 (316)
T cd05620          81 GDLMFHIQDK   90 (316)
T ss_pred             CcHHHHHHHc
Confidence            9999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.67  E-value=9.2e-08  Score=92.85  Aligned_cols=83  Identities=28%  Similarity=0.464  Sum_probs=68.9

Q ss_pred             eeeccCCccEEEEEe---cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          471 KLGEGGYGPVYKGVL---PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~---~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      .||+|+||.||+|..   .++..+|+|.++...  ....+++.+|+.++.+++||||+++++.+. .+..++|+||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999999974   346789999986332  233567999999999999999999999875 45678999999999


Q ss_pred             CHHHHHhcC
Q 008332          546 SLDCYLFGL  554 (570)
Q Consensus       546 sL~~~L~~~  554 (570)
                      +|.+++...
T Consensus        81 ~L~~~l~~~   89 (257)
T cd05116          81 PLNKFLQKN   89 (257)
T ss_pred             cHHHHHHhc
Confidence            999999754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.67  E-value=1.2e-07  Score=92.46  Aligned_cols=90  Identities=24%  Similarity=0.389  Sum_probs=74.2

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--c---ccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--T---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERM  536 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~  536 (570)
                      +|+..+.||+|+||.||++.. ..+..+++|.+....  .   .....+.+|+.++.+++||||+++.+.+...  ...+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            577789999999999999984 568899999885321  1   2234688999999999999999999987653  5678


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +++||+++++|.+++.+.
T Consensus        83 l~~e~~~~~~L~~~l~~~  100 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAY  100 (266)
T ss_pred             EEEeCCCCCcHHHHHHHc
Confidence            999999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.67  E-value=6.4e-08  Score=96.25  Aligned_cols=85  Identities=26%  Similarity=0.307  Sum_probs=73.9

Q ss_pred             ceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          469 RNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      ...||+|+||.||++.. .+++.+++|.+........+.+.+|+.++..++|||++++++.+......++++||+++++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            35799999999999984 46889999998644444456788999999999999999999999999999999999999999


Q ss_pred             HHHHhc
Q 008332          548 DCYLFG  553 (570)
Q Consensus       548 ~~~L~~  553 (570)
                      .+++..
T Consensus       106 ~~~~~~  111 (297)
T cd06659         106 TDIVSQ  111 (297)
T ss_pred             HHHHhh
Confidence            998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.67  E-value=1e-07  Score=94.47  Aligned_cols=102  Identities=23%  Similarity=0.313  Sum_probs=78.6

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCe-----e
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEE-----R  535 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~-----~  535 (570)
                      +|+..+.||+|+||.||++.. .+++.||+|.++...  ......+.+|+.++..+ +||||+++.+++...+.     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            577789999999999999995 468899999885332  22335688999999999 56999999999887655     8


Q ss_pred             EEEEecCCCCCHHHHHhcCCCC-cccccHhhhh
Q 008332          536 MLIYEYMPNKSLDCYLFGLSHQ-KTYFGLEKTC  567 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~~-~~~~~~~~~~  567 (570)
                      +++|||+++ +|.+++...... ...+++.+++
T Consensus        82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~  113 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIK  113 (295)
T ss_pred             EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHH
Confidence            999999985 899998754432 3345555543

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.66  E-value=7.2e-08  Score=95.09  Aligned_cols=90  Identities=28%  Similarity=0.460  Sum_probs=75.4

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..+.||+|++|.||++.. .+++.+++|.+....  ......+.+|+.++.+++||||+++.+.+......++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            366778999999999999985 468899999886332  22335788999999999999999999999988999999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      ++ ++|.+++....
T Consensus        81 ~~-~~l~~~~~~~~   93 (284)
T cd07860          81 LH-QDLKKFMDASP   93 (284)
T ss_pred             cc-cCHHHHHHhCC
Confidence            96 68999987643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.66  E-value=8.3e-08  Score=92.95  Aligned_cols=88  Identities=27%  Similarity=0.506  Sum_probs=73.7

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      .+|++.+.||+|+||.||++.. .++.+++|.++...  ....+.+|+.++.+++|||++++.+.+.. +..++++||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence            3477789999999999999975 47889999985432  34578999999999999999999998764 45789999999


Q ss_pred             CCCHHHHHhcCC
Q 008332          544 NKSLDCYLFGLS  555 (570)
Q Consensus       544 ~GsL~~~L~~~~  555 (570)
                      +|+|.+++....
T Consensus        82 ~~~L~~~l~~~~   93 (254)
T cd05083          82 KGNLVNFLRTRG   93 (254)
T ss_pred             CCCHHHHHHhcC
Confidence            999999998643

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.66  E-value=6.3e-08  Score=93.23  Aligned_cols=91  Identities=29%  Similarity=0.457  Sum_probs=75.6

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCC-ccceeEEEEeCC------e
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVN-LIRVLGFCIDSE------E  534 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~n-iv~l~g~~~~~~------~  534 (570)
                      .|...+.||+|.||.||+|. ..+|+.||+|+++....  .......+|+.++.+++|+| |++|.+++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            35556789999999999999 67789999999964322  12245689999999999999 999999999887      7


Q ss_pred             eEEEEecCCCCCHHHHHhcCCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      +++|+||+.. +|..|+.....
T Consensus        92 l~lvfe~~d~-DL~~ymd~~~~  112 (323)
T KOG0594|consen   92 LYLVFEFLDR-DLKKYMDSLPK  112 (323)
T ss_pred             EEEEEEeecc-cHHHHHHhccc
Confidence            8899999977 99999986553

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.66  E-value=1.3e-07  Score=92.15  Aligned_cols=91  Identities=24%  Similarity=0.414  Sum_probs=75.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-----CcccHHHHHHHHHHHHccCCCCccceeEEEEeC--Cee
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-----STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EER  535 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-----~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~  535 (570)
                      .+|.+.+.||+|+||.||++.. .++..+++|.+...     .......+.+|+.++.+++|+||+++.+.+...  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4577889999999999999984 56889999987421     122345788999999999999999999988664  457


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++++||+++++|.+++.+.
T Consensus        82 ~~v~e~~~~~~L~~~~~~~  100 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY  100 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc
Confidence            8999999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.66  E-value=1.1e-07  Score=98.15  Aligned_cols=85  Identities=20%  Similarity=0.241  Sum_probs=73.8

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ..+|++.+.||+|+||.||++. ...++.||+|...      ...+.+|+.++.+++||||+++.+.+......++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            3568999999999999999999 4568899999753      23578999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +. ++|.+++...
T Consensus       165 ~~-~~L~~~l~~~  176 (391)
T PHA03212        165 YK-TDLYCYLAAK  176 (391)
T ss_pred             CC-CCHHHHHHhc
Confidence            95 6999998754

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.66  E-value=1.3e-07  Score=93.74  Aligned_cols=91  Identities=27%  Similarity=0.418  Sum_probs=75.5

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ..+|...+.||+|+||.||+|.. .+++.+++|.+.... ......+.+|+.++.+++|+||+++.+++......++|+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            35678889999999999999984 568899999986432 2223467899999999999999999999998889999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+. ++|.+++...
T Consensus        84 ~~~-~~l~~~~~~~   96 (291)
T cd07870          84 YMH-TDLAQYMIQH   96 (291)
T ss_pred             ccc-CCHHHHHHhC
Confidence            996 6888887643

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.65  E-value=1.2e-07  Score=94.07  Aligned_cols=84  Identities=26%  Similarity=0.386  Sum_probs=73.9

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCHH
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD  548 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL~  548 (570)
                      ..||+|+||.||++.. .+++.+++|.+..........+.+|+.++..++|+|++++++.+...+..+++|||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            6799999999999985 568899999986444444567899999999999999999999999999999999999999999


Q ss_pred             HHHhc
Q 008332          549 CYLFG  553 (570)
Q Consensus       549 ~~L~~  553 (570)
                      +++..
T Consensus       106 ~~~~~  110 (292)
T cd06657         106 DIVTH  110 (292)
T ss_pred             HHHhc
Confidence            98864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.65  E-value=1.2e-07  Score=93.18  Aligned_cols=90  Identities=30%  Similarity=0.502  Sum_probs=73.9

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCc----EEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~----~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|+..+.||+|+||.||+|.. .++.    .||+|.+... .......+.+|+.++..++|||++++++.+.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            4577789999999999999983 4444    4899998643 33345678999999999999999999999875 45679


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ++||+++|+|.+++++.
T Consensus        86 ~~~~~~~g~l~~~l~~~  102 (279)
T cd05109          86 VTQLMPYGCLLDYVREN  102 (279)
T ss_pred             EEEcCCCCCHHHHHhhc
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.65  E-value=1.8e-07  Score=90.07  Aligned_cols=89  Identities=29%  Similarity=0.501  Sum_probs=78.5

Q ss_pred             cccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      |...+.||+|++|.||++... +++.+++|++..........+.+|+.++.+++|+|++++.+.+......++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            556689999999999999964 6889999999755444567899999999999999999999999989999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      ++|.+++...
T Consensus        82 ~~L~~~~~~~   91 (253)
T cd05122          82 GSLKDLLKST   91 (253)
T ss_pred             CcHHHHHhhc
Confidence            9999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.65  E-value=1.5e-07  Score=93.06  Aligned_cols=87  Identities=25%  Similarity=0.318  Sum_probs=75.5

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      ...+.||+|++|.||++.. .+++.+++|.+........+.+.+|+.++..++|||++++++.+...+..++++||++++
T Consensus        22 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          22 DNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             hcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            3347999999999999984 568899999986444444567889999999999999999999999889999999999999


Q ss_pred             CHHHHHhc
Q 008332          546 SLDCYLFG  553 (570)
Q Consensus       546 sL~~~L~~  553 (570)
                      +|.+++..
T Consensus       102 ~L~~~~~~  109 (285)
T cd06648         102 ALTDIVTH  109 (285)
T ss_pred             CHHHHHHh
Confidence            99999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.65  E-value=9.8e-08  Score=93.97  Aligned_cols=90  Identities=28%  Similarity=0.472  Sum_probs=71.1

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCc----EEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~----~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +|+..+.||+|+||.||+|.. .+++    .+++|.+.... .....++..|+.++.++.||||+++++++. ....+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence            466778999999999999985 3344    47788775332 233457888888999999999999999875 4557889


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      +||+++|+|.++++...
T Consensus        87 ~e~~~~gsL~~~l~~~~  103 (279)
T cd05111          87 TQLSPLGSLLDHVRQHR  103 (279)
T ss_pred             EEeCCCCcHHHHHHhcc
Confidence            99999999999998643

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.64  E-value=3.1e-08  Score=99.83  Aligned_cols=95  Identities=23%  Similarity=0.302  Sum_probs=79.7

Q ss_pred             HHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCee
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~  535 (570)
                      ...++|..++.||+|+|.+|++++ ...++.+|||++.+..   ....+-..+|-.+|.+| .||.|++|+--+.+...+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            345678889999999999999999 6678999999985321   12233456788899999 899999999999999999


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      |+|+||++||+|.++|++..
T Consensus       150 YFvLe~A~nGdll~~i~K~G  169 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYG  169 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhC
Confidence            99999999999999999753

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.64  E-value=3.9e-08  Score=95.58  Aligned_cols=102  Identities=23%  Similarity=0.376  Sum_probs=77.3

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCC-----CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKT-----STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~-----~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +|.+.+.||+|+||.||++... .+...++|.++..     .......+.+|+.++.+++|||++++.+.+......++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            3667789999999999999843 3444556655421     122334577899999999999999999999888899999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      +||+++++|.++++........+++.++
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~  108 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQV  108 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHH
Confidence            9999999999999864444445555543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.64  E-value=1.2e-07  Score=91.98  Aligned_cols=85  Identities=35%  Similarity=0.532  Sum_probs=69.6

Q ss_pred             eeeeccCCccEEEEEec-C---CcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVLP-C---GEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~-~---~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||+|... .   +..+++|.+..... ...+.+.+|+.++.++.|+|++++++.+. .+..++|+||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            46899999999999742 2   26899999864433 24467999999999999999999999875 5568999999999


Q ss_pred             CCHHHHHhcCC
Q 008332          545 KSLDCYLFGLS  555 (570)
Q Consensus       545 GsL~~~L~~~~  555 (570)
                      |+|.++|.+..
T Consensus        80 ~~L~~~l~~~~   90 (257)
T cd05060          80 GPLLKYLKKRR   90 (257)
T ss_pred             CcHHHHHHhCC
Confidence            99999998643

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.64  E-value=1e-07  Score=95.28  Aligned_cols=90  Identities=27%  Similarity=0.380  Sum_probs=75.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ..|...+.||+|+||.||++.. .+++.|++|.+.....   ...+.+.+|+.++.+++|||++++.+++......++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            4477778999999999999984 4588999999853322   23357889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||++ |+|.+++...
T Consensus        95 e~~~-g~l~~~~~~~  108 (307)
T cd06607          95 EYCL-GSASDILEVH  108 (307)
T ss_pred             HhhC-CCHHHHHHHc
Confidence            9997 6888887643

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.64  E-value=6.2e-08  Score=95.15  Aligned_cols=90  Identities=24%  Similarity=0.340  Sum_probs=77.2

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeEEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~  539 (570)
                      +|.+.+.||+|+||.||++.. .+++.+++|.+...   .......+.+|..++.+++ ||||+++.+.+......+++|
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            577789999999999999995 46889999998542   2223456889999999998 999999999998889999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      |++++|+|.+++.+.
T Consensus        82 e~~~~~~L~~~l~~~   96 (280)
T cd05581          82 EYAPNGELLQYIRKY   96 (280)
T ss_pred             cCCCCCcHHHHHHHc
Confidence            999999999999864

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.64  E-value=1.7e-08  Score=95.06  Aligned_cols=95  Identities=25%  Similarity=0.318  Sum_probs=82.6

Q ss_pred             hHHHHHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCC
Q 008332          456 LADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSE  533 (570)
Q Consensus       456 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~  533 (570)
                      ++++-..+.     ++||+|+++.|-.|. +.+|..+|||++.+...+.+....+|++++.+. .|+||++|+..+.+.+
T Consensus        75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            455555544     889999999999998 778999999999877667778888999999988 6999999999999999


Q ss_pred             eeEEEEecCCCCCHHHHHhcCC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ..|||||-|.+|+|.+.|++++
T Consensus       150 ~FYLVfEKm~GGplLshI~~~~  171 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKRK  171 (463)
T ss_pred             eEEEEEecccCchHHHHHHHhh
Confidence            9999999999999999998643

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.64  E-value=6.6e-08  Score=96.79  Aligned_cols=84  Identities=24%  Similarity=0.391  Sum_probs=71.1

Q ss_pred             cceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          468 IRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       468 ~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ..++||+|.||.||-|. .++|+.||||.+.+..  ......+..|+.++.+++||.||.|--.|..++..++|||-+. 
T Consensus       568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-  646 (888)
T KOG4236|consen  568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-  646 (888)
T ss_pred             hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-
Confidence            35899999999999998 6779999999996432  2344678999999999999999999999999999999999995 


Q ss_pred             CCHHHHHh
Q 008332          545 KSLDCYLF  552 (570)
Q Consensus       545 GsL~~~L~  552 (570)
                      |+..+.|.
T Consensus       647 GDMLEMIL  654 (888)
T KOG4236|consen  647 GDMLEMIL  654 (888)
T ss_pred             chHHHHHH
Confidence            56666554

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.64  E-value=1.5e-07  Score=91.32  Aligned_cols=101  Identities=17%  Similarity=0.179  Sum_probs=78.3

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC-CeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-EERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e  540 (570)
                      +|++.+.||+|++|.||++.. .+++.+++|.+...  .....+.+.+|+.++.+++|+|++++.+.+... ...++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            367789999999999999984 45788999998532  223345788999999999999999999877543 46789999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |+++++|.++++....  ..+++.+++
T Consensus        81 ~~~~~~l~~~l~~~~~--~~l~~~~~~  105 (257)
T cd08223          81 FCEGGDLYHKLKEQKG--KLLPENQVV  105 (257)
T ss_pred             ccCCCcHHHHHHHhcC--CCCCHHHHH
Confidence            9999999999986432  234444443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.64  E-value=1.1e-07  Score=93.86  Aligned_cols=89  Identities=24%  Similarity=0.391  Sum_probs=74.9

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|++.+.||+|+||.||++.. .+++.|++|.++..  .....+.+.+|+.++++++|+||+++++.+...+..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            577789999999999999985 45789999988632  233346789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhc
Q 008332          542 MPNKSLDCYLFG  553 (570)
Q Consensus       542 ~~~GsL~~~L~~  553 (570)
                      ++++.|..++..
T Consensus        82 ~~~~~l~~~~~~   93 (288)
T cd07833          82 VERTLLELLEAS   93 (288)
T ss_pred             CCCCHHHHHHhc
Confidence            998777666543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.64  E-value=1.2e-07  Score=92.24  Aligned_cols=86  Identities=27%  Similarity=0.517  Sum_probs=69.6

Q ss_pred             eeeeccCCccEEEEEec----CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeC-CeeEEEEecCC
Q 008332          470 NKLGEGGYGPVYKGVLP----CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-EERMLIYEYMP  543 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e~~~  543 (570)
                      +.||+|+||.||+|...    .+..+|+|.+... .....+.+.+|+.+++.++|||++++++.+... ...++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999842    2347999988532 233456789999999999999999999988654 45789999999


Q ss_pred             CCCHHHHHhcCC
Q 008332          544 NKSLDCYLFGLS  555 (570)
Q Consensus       544 ~GsL~~~L~~~~  555 (570)
                      +|+|.+++.+..
T Consensus        81 ~~~L~~~~~~~~   92 (262)
T cd05058          81 HGDLRNFIRSET   92 (262)
T ss_pred             CCCHHHHHHhcC
Confidence            999999998643

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.63  E-value=1.3e-07  Score=92.09  Aligned_cols=83  Identities=22%  Similarity=0.217  Sum_probs=71.8

Q ss_pred             eeccCCccEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          472 LGEGGYGPVYKGVLP-CGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       472 lg~G~fg~V~~~~~~-~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      ||.|++|.||++... .++.+++|.+....   ....+.+.+|+.++.+++||||+++++.+..+...++++||+++|+|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999954 48899999986432   22346789999999999999999999999989999999999999999


Q ss_pred             HHHHhcC
Q 008332          548 DCYLFGL  554 (570)
Q Consensus       548 ~~~L~~~  554 (570)
                      .++|.+.
T Consensus        81 ~~~l~~~   87 (262)
T cd05572          81 WTILRDR   87 (262)
T ss_pred             HHHHhhc
Confidence            9999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.63  E-value=1.7e-07  Score=93.86  Aligned_cols=89  Identities=24%  Similarity=0.367  Sum_probs=73.6

Q ss_pred             cccceeeeccCCccEEEEEec---CCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP---CGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERML  537 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~---~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  537 (570)
                      |...+.||+|+||.||++...   .+..+|+|.+....   ......+.+|+.++.+++||||+++.+.+...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            566789999999999999953   47899999986532   23345678899999999999999999999888  78999


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      |+||+++ +|.+++....
T Consensus        82 v~e~~~~-~l~~~~~~~~   98 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHR   98 (316)
T ss_pred             EEeCCCc-CHHHHHHhhc
Confidence            9999975 7888876443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.62  E-value=1.8e-07  Score=93.98  Aligned_cols=88  Identities=26%  Similarity=0.393  Sum_probs=73.4

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      |...+.||+|+||.||++.. .++..+++|.+.....   .....+.+|+.++.+++|||++++.+++......++|+||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            56678899999999999994 5688999999863322   2335788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      ++ |+|.+++...
T Consensus       107 ~~-g~l~~~~~~~  118 (317)
T cd06635         107 CL-GSASDLLEVH  118 (317)
T ss_pred             CC-CCHHHHHHHh
Confidence            97 5888887643

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.62  E-value=1.6e-07  Score=98.69  Aligned_cols=96  Identities=20%  Similarity=0.221  Sum_probs=77.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ...|.+.+.||+|+||.||++.. ..++.||||...      ...+.+|+.++.+++|+||+++++++......++|+|+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            34678889999999999999994 457889999642      12467899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      +. |+|.+++....   ..+++.+++.
T Consensus       242 ~~-~~L~~~l~~~~---~~l~~~~~~~  264 (461)
T PHA03211        242 YR-SDLYTYLGARL---RPLGLAQVTA  264 (461)
T ss_pred             cC-CCHHHHHHhcC---CCCCHHHHHH
Confidence            95 79999987532   2455555543

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.61  E-value=1.6e-07  Score=94.70  Aligned_cols=85  Identities=19%  Similarity=0.212  Sum_probs=67.7

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHH-HHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVM-LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++.. .+++.+|+|++....   ......+..|.. ++..++||||+++.+.+...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4689999999999994 457789999985321   122234444544 56778999999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|.+++...
T Consensus        81 ~~L~~~~~~~   90 (325)
T cd05602          81 GELFYHLQRE   90 (325)
T ss_pred             CcHHHHHHhc
Confidence            9999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.61  E-value=1.4e-07  Score=99.09  Aligned_cols=98  Identities=19%  Similarity=0.414  Sum_probs=73.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC--------C
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--------E  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--------~  533 (570)
                      ..+|.+.+.||+|+||.||+|.. ..++.||||.+....    ....+|+.+|.+++||||+++.+.+...        .
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            45688999999999999999994 568899999884322    2345799999999999999998876432        2


Q ss_pred             eeEEEEecCCCCCHHHHHhcCCCCcccccHhh
Q 008332          534 ERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      .+++||||+++ +|.+++.........+++..
T Consensus       141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~  171 (440)
T PTZ00036        141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFL  171 (440)
T ss_pred             EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHH
Confidence            46799999985 78888764333333444443

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.61  E-value=1.7e-07  Score=92.41  Aligned_cols=89  Identities=28%  Similarity=0.463  Sum_probs=74.5

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      |+..+.||+|.+|.||++.. .+|..+++|++....  ......+.+|+.++.+++|||++++.+.+......++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            34568899999999999984 468999999986332  223356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC
Q 008332          543 PNKSLDCYLFGLS  555 (570)
Q Consensus       543 ~~GsL~~~L~~~~  555 (570)
                      + ++|.+++....
T Consensus        81 ~-~~l~~~~~~~~   92 (283)
T cd07835          81 D-LDLKKYMDSSP   92 (283)
T ss_pred             C-cCHHHHHhhCC
Confidence            5 69999997644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.60  E-value=1.7e-07  Score=93.38  Aligned_cols=92  Identities=28%  Similarity=0.433  Sum_probs=74.9

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----  533 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----  533 (570)
                      ..++|++.+.||+|+||.||+|.. .+++.|++|.++...  ......+.+|+.++.+++|||++++.+.+....     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            446688889999999999999995 458899999986332  223356788999999999999999999887654     


Q ss_pred             -----eeEEEEecCCCCCHHHHHhcC
Q 008332          534 -----ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 -----~~~lv~e~~~~GsL~~~L~~~  554 (570)
                           ..++|+||+++ +|..++...
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~  109 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESG  109 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcC
Confidence                 68999999986 788887754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.60  E-value=1.5e-07  Score=92.63  Aligned_cols=100  Identities=26%  Similarity=0.407  Sum_probs=79.7

Q ss_pred             ChHHHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEe-
Q 008332          455 SLADIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID-  531 (570)
Q Consensus       455 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~-  531 (570)
                      ++.++..+...|+..+.||+|+||.||++.. ..++.+++|.+.... .....+..|+.++.++ +|+|++++.+.+.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            3344455667788889999999999999994 567899999885332 2345688899999998 79999999998853 


Q ss_pred             -----CCeeEEEEecCCCCCHHHHHhcCC
Q 008332          532 -----SEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       532 -----~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                           ....+++|||+++|+|.+++...+
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~  114 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK  114 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHcc
Confidence                 346899999999999999998644

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.60  E-value=4e-08  Score=101.39  Aligned_cols=85  Identities=27%  Similarity=0.448  Sum_probs=76.3

Q ss_pred             eeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCHH
Q 008332          470 NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD  548 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL~  548 (570)
                      -+||+|.+|.||.|+ ..+...+|||.++.......+-+..|+.+.++++|.|||+.+|.|..++..-|.||-+|+|||.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            479999999999999 4555679999998777667777889999999999999999999999999999999999999999


Q ss_pred             HHHhcC
Q 008332          549 CYLFGL  554 (570)
Q Consensus       549 ~~L~~~  554 (570)
                      ++|+.+
T Consensus       661 sLLrsk  666 (1226)
T KOG4279|consen  661 SLLRSK  666 (1226)
T ss_pred             HHHHhc
Confidence            999954

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.59  E-value=2.4e-07  Score=90.72  Aligned_cols=89  Identities=29%  Similarity=0.500  Sum_probs=71.2

Q ss_pred             cccceeeeccCCccEEEEEec----CCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC------
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------  533 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------  533 (570)
                      |.+.+.||+|+||.||++...    .++.+|+|.+...  .....+.+.+|+.++.+++|||++++++.+....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            345688999999999999842    3678999998643  2234567899999999999999999999886542      


Q ss_pred             eeEEEEecCCCCCHHHHHhcC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..++++||+++|+|.+++...
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~  101 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMS  101 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHh
Confidence            247899999999999998644

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.59  E-value=1.2e-07  Score=92.07  Aligned_cols=83  Identities=19%  Similarity=0.364  Sum_probs=71.9

Q ss_pred             eeccCCccEEEEEec-CCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          472 LGEGGYGPVYKGVLP-CGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       472 lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      ||+|+||.||++... +++.+++|.+.....   ...+.+.+|+.++.+++|||++++.+.+......++++||+++|+|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            589999999999965 488999999864332   3446788999999999999999999999888899999999999999


Q ss_pred             HHHHhcC
Q 008332          548 DCYLFGL  554 (570)
Q Consensus       548 ~~~L~~~  554 (570)
                      .+++.+.
T Consensus        81 ~~~l~~~   87 (265)
T cd05579          81 ASLLENV   87 (265)
T ss_pred             HHHHHHc
Confidence            9999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.59  E-value=1.9e-07  Score=93.99  Aligned_cols=86  Identities=15%  Similarity=0.163  Sum_probs=67.0

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEec--CCcEEEEEEecCC-----CcccHHHHHHHHHHHHccCCCCccceeEEEEeC
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLP--CGEVIAVKKLSKT-----STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS  532 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~--~~~~vavK~l~~~-----~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~  532 (570)
                      .....+|.+.+.||+|+||.||+|...  +++.+|||++...     .......|.+|+.+|.+++|+|+++.+..   .
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence            334567889999999999999999853  5777899987532     11224568999999999999999864322   2


Q ss_pred             CeeEEEEecCCCCCHH
Q 008332          533 EERMLIYEYMPNKSLD  548 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~  548 (570)
                      ...++||||+++++|.
T Consensus        91 ~~~~LVmE~~~G~~L~  106 (365)
T PRK09188         91 GKDGLVRGWTEGVPLH  106 (365)
T ss_pred             CCcEEEEEccCCCCHH
Confidence            4679999999999997

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.59  E-value=3e-07  Score=90.93  Aligned_cols=89  Identities=25%  Similarity=0.440  Sum_probs=68.5

Q ss_pred             CcccceeeeccCCccEEEEEe--cCCcEEEEEEecCCC--cccHHHHHHHHHHHHcc---CCCCccceeEEEEe-----C
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKL---QHVNLIRVLGFCID-----S  532 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~--~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l---~h~niv~l~g~~~~-----~  532 (570)
                      +|.+.+.||+|+||.||++..  ..++.||+|.++...  ......+.+|+.++..+   +||||++++++|..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            567789999999999999984  346789999986322  22234566777777665   69999999999863     3


Q ss_pred             CeeEEEEecCCCCCHHHHHhcC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ...++|+||++ |+|.+++...
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~  102 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKV  102 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhC
Confidence            45889999996 6999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.57  E-value=1.5e-07  Score=98.94  Aligned_cols=93  Identities=19%  Similarity=0.392  Sum_probs=68.3

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-----------------cCCcEEEEEEecCCCcccHHH--------------HHHH
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-----------------PCGEVIAVKKLSKTSTQGFEE--------------FKNE  510 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-----------------~~~~~vavK~l~~~~~~~~~~--------------f~~e  510 (570)
                      ..++|.+.++||+|+||.||+|..                 ..++.||||++........++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            356789999999999999999963                 234679999986433222223              3457


Q ss_pred             HHHHHccCCCCc-----cceeEEEEe--------CCeeEEEEecCCCCCHHHHHhcC
Q 008332          511 VMLTAKLQHVNL-----IRVLGFCID--------SEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       511 ~~~l~~l~h~ni-----v~l~g~~~~--------~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      +.++.+++|.++     ++++++|..        ....+||+||+++|+|.++|+..
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~  279 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGK  279 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhc
Confidence            777777766654     567777653        34689999999999999999864

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.57  E-value=2.9e-09  Score=96.54  Aligned_cols=89  Identities=22%  Similarity=0.416  Sum_probs=75.7

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEec--CCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS--KTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~--~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +.+++.++||+|.|..|+++. ..+|+..|+|.+.  .......+++.+|+++...++|||||+|..........+||+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            456677999999999999998 5678888988874  2333466789999999999999999999998888889999999


Q ss_pred             cCCCCCHHHHHh
Q 008332          541 YMPNKSLDCYLF  552 (570)
Q Consensus       541 ~~~~GsL~~~L~  552 (570)
                      +|++|+|..=|-
T Consensus        91 ~m~G~dl~~eIV  102 (355)
T KOG0033|consen   91 LVTGGELFEDIV  102 (355)
T ss_pred             cccchHHHHHHH
Confidence            999999976554

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.57  E-value=2.3e-07  Score=92.59  Aligned_cols=90  Identities=33%  Similarity=0.631  Sum_probs=72.1

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCc----EEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~----~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|+..+.||+|+||.||++.. .++.    .+|+|.+.... .....++.+|+.++.+++||||++++|.|... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            3466778999999999999984 3444    47888886432 23334788999999999999999999998654 4678


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ++||+++|+|.+++...
T Consensus        86 v~e~~~~g~l~~~~~~~  102 (303)
T cd05110          86 VTQLMPHGCLLDYVHEH  102 (303)
T ss_pred             eehhcCCCCHHHHHHhc
Confidence            99999999999999854

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.57  E-value=1.2e-07  Score=93.40  Aligned_cols=89  Identities=25%  Similarity=0.436  Sum_probs=73.9

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +|+..+.||+|+||.||++.. .+|+.+++|.++...  ......+.+|+.++.+++|||++++++.+......++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            356678999999999999995 568899999986322  12234678899999999999999999999988999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      ++ |+|.+++...
T Consensus        81 ~~-~~l~~~~~~~   92 (284)
T cd07839          81 CD-QDLKKYFDSC   92 (284)
T ss_pred             CC-CCHHHHHHhc
Confidence            97 5899988753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.57  E-value=2.9e-07  Score=91.06  Aligned_cols=89  Identities=24%  Similarity=0.284  Sum_probs=74.8

Q ss_pred             cccceeeeccCCccEEEEEe----cCCcEEEEEEecCCCc----ccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeE
Q 008332          466 FSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTST----QGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~~----~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  536 (570)
                      |++.+.||+|+||.||++..    .+|+.+|+|+++....    ...+.+.+|+.++.++ +|+||+++.+.+......+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            56778999999999999984    3688999999864321    2235678899999999 6999999999988888899


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +|+||+++|+|.++|...
T Consensus        82 lv~e~~~~~~L~~~l~~~   99 (290)
T cd05613          82 LILDYINGGELFTHLSQR   99 (290)
T ss_pred             EEEecCCCCcHHHHHHHc
Confidence            999999999999999754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.57  E-value=2.3e-07  Score=93.69  Aligned_cols=86  Identities=20%  Similarity=0.307  Sum_probs=72.1

Q ss_pred             eeeecc--CCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEG--GYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G--~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|  +||.||++.. ..++.||+|.+....  ....+.+.+|+.++..++||||+++++++..++..++|+||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            456666  8899999984 568999999986332  22346788999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCC
Q 008332          545 KSLDCYLFGLS  555 (570)
Q Consensus       545 GsL~~~L~~~~  555 (570)
                      |+|.+++....
T Consensus        84 ~~l~~~l~~~~   94 (328)
T cd08226          84 GSANSLLKTYF   94 (328)
T ss_pred             CCHHHHHHhhc
Confidence            99999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.57  E-value=2.8e-07  Score=90.90  Aligned_cols=88  Identities=28%  Similarity=0.430  Sum_probs=74.0

Q ss_pred             cccceeeeccCCccEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEEEe
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLIYE  540 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  540 (570)
                      |+..+.||+|++|.||++... .++.+++|.+....  ......+.+|+.++.+++|+|++++.+.+...  ...++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            345688999999999999954 57899999997542  23345788999999999999999999999887  78999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++ +|.+++...
T Consensus        81 ~~~~-~l~~~~~~~   93 (287)
T cd07840          81 YMDH-DLTGLLDSP   93 (287)
T ss_pred             cccc-cHHHHHhcc
Confidence            9985 999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.56  E-value=2.4e-07  Score=91.90  Aligned_cols=90  Identities=27%  Similarity=0.414  Sum_probs=74.0

Q ss_pred             CcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLIY  539 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~  539 (570)
                      +|+..+.||+|+||.||++... +++.+++|.++....  .....+.+|+.++.+++||||+++.+.+...  ...++|+
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~   85 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM   85 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence            5677789999999999999954 578999999863322  2234577899999999999999999998877  7899999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      ||++ ++|.+++....
T Consensus        86 e~~~-~~L~~~~~~~~  100 (293)
T cd07843          86 EYVE-HDLKSLMETMK  100 (293)
T ss_pred             hhcC-cCHHHHHHhcc
Confidence            9997 59999987543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.55  E-value=3.6e-07  Score=89.88  Aligned_cols=89  Identities=25%  Similarity=0.359  Sum_probs=71.2

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccC-CCCccceeEEEEeC--CeeEEEEe
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDS--EERMLIYE  540 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~e  540 (570)
                      |++.+.||+|+||.||++.. .+++.+|+|.++... ........+|+.++.++. |+|++++.+.+...  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            34568899999999999994 568899999986432 222234567888999885 99999999999887  78999999


Q ss_pred             cCCCCCHHHHHhcCC
Q 008332          541 YMPNKSLDCYLFGLS  555 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~  555 (570)
                      |++ |+|.+++.+..
T Consensus        81 ~~~-~~l~~~l~~~~   94 (282)
T cd07831          81 LMD-MNLYELIKGRK   94 (282)
T ss_pred             cCC-ccHHHHHHhcc
Confidence            997 68999987643

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.55  E-value=1.8e-08  Score=109.54  Aligned_cols=100  Identities=21%  Similarity=0.243  Sum_probs=84.8

Q ss_pred             hHHHHHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEe
Q 008332          456 LADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCID  531 (570)
Q Consensus       456 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~  531 (570)
                      ..++...+++|.+.++||+|+||.|...+ ..+++.+|.|++..+.   .....-|..|-.+|..-+.++|++|.-.+.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            34556667889999999999999999998 4668889999996532   2233458899999999999999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ...+|+|||||+||+|..+|.+..
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~  170 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFD  170 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcC
Confidence            999999999999999999998754

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.55  E-value=4.2e-07  Score=90.16  Aligned_cols=90  Identities=27%  Similarity=0.386  Sum_probs=75.4

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|+..+.||+|.+|.||++.. .+++.+++|.+.....  .....+.+|+.++.+++|||++++.+.+......++|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            3577889999999999999995 4688999999854322  233568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |++ ++|.+++...
T Consensus        82 ~~~-~~l~~~~~~~   94 (294)
T PLN00009         82 YLD-LDLKKHMDSS   94 (294)
T ss_pred             ccc-ccHHHHHHhC
Confidence            996 5888888643

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.54  E-value=1.6e-07  Score=92.45  Aligned_cols=89  Identities=26%  Similarity=0.399  Sum_probs=73.3

Q ss_pred             cccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc-ccHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      |++.+.||+|++|.||+|... .++.|++|++..... .......+|+..+.+++ |+|++++.+.+......++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            345688999999999999964 478899999864322 22234567999999998 999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC
Q 008332          543 PNKSLDCYLFGLS  555 (570)
Q Consensus       543 ~~GsL~~~L~~~~  555 (570)
                       +|+|.++++...
T Consensus        81 -~~~l~~~~~~~~   92 (283)
T cd07830          81 -EGNLYQLMKDRK   92 (283)
T ss_pred             -CCCHHHHHHhcc
Confidence             889999998654

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.52  E-value=4.8e-07  Score=90.44  Aligned_cols=91  Identities=26%  Similarity=0.431  Sum_probs=73.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  537 (570)
                      .++|+..+.||+|+||.||++.. .+++.||+|.++....  .....+.+|+.++.+++|+|++++.+.+...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            35678889999999999999995 4588999999863322  2223567899999999999999999998755  46899


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      |+||+.+ +|.+++...
T Consensus        86 v~e~~~~-~l~~~l~~~  101 (309)
T cd07845          86 VMEYCEQ-DLASLLDNM  101 (309)
T ss_pred             EEecCCC-CHHHHHHhc
Confidence            9999974 899998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.51  E-value=1.9e-07  Score=96.59  Aligned_cols=92  Identities=21%  Similarity=0.385  Sum_probs=76.9

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC------CCCccceeEEEEeCCeeEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ------HVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~------h~niv~l~g~~~~~~~~~l  537 (570)
                      +|.+.++||+|.||+|.+|. ..+++.||||+++.... -..+-+.|+.+|..++      --|+|++++++...++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            67889999999999999999 56699999999964332 2345567888888885      3489999999999999999


Q ss_pred             EEecCCCCCHHHHHhcCCCCc
Q 008332          538 IYEYMPNKSLDCYLFGLSHQK  558 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~  558 (570)
                      |+|.+.. +|.+||+..+.+.
T Consensus       266 VfELL~~-NLYellK~n~f~G  285 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFRG  285 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCCC
Confidence            9999976 9999999866544

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.51  E-value=4.2e-07  Score=92.90  Aligned_cols=86  Identities=19%  Similarity=0.213  Sum_probs=72.3

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ...+|.+.+.||+|+||.||+|.. ..++.||+|.....      ....|+.++.+++||||+++++.+......++|+|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            345689999999999999999995 44678999975322      23568999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      ++. |+|.+++...
T Consensus       138 ~~~-~~l~~~l~~~  150 (357)
T PHA03209        138 HYS-SDLYTYLTKR  150 (357)
T ss_pred             ccC-CcHHHHHHhc
Confidence            995 6999998753

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.50  E-value=7.7e-07  Score=84.08  Aligned_cols=89  Identities=37%  Similarity=0.534  Sum_probs=77.5

Q ss_pred             ccceeeeccCCccEEEEEecC-CcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          467 SIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~~~-~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ...+.||+|++|.||++.... ++.+++|.+...... ..+.+.+|+..+.+++|+|++++++.+......++++|++++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            456889999999999999654 789999999754443 567889999999999999999999999888899999999999


Q ss_pred             CCHHHHHhcCC
Q 008332          545 KSLDCYLFGLS  555 (570)
Q Consensus       545 GsL~~~L~~~~  555 (570)
                      ++|.+++....
T Consensus        82 ~~L~~~~~~~~   92 (225)
T smart00221       82 GDLFDYLRKKG   92 (225)
T ss_pred             CCHHHHHHhcc
Confidence            99999998654

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.50  E-value=4.1e-07  Score=92.10  Aligned_cols=85  Identities=21%  Similarity=0.326  Sum_probs=70.6

Q ss_pred             cceeeeccCCccEEEEEe-cCCcEEEEEEecCCCccc--------------HHHHHHHHHHHHccCCCCccceeEEEEeC
Q 008332          468 IRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQG--------------FEEFKNEVMLTAKLQHVNLIRVLGFCIDS  532 (570)
Q Consensus       468 ~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~--------------~~~f~~e~~~l~~l~h~niv~l~g~~~~~  532 (570)
                      +.+.||+|+||.||++.. ..++.||+|.+.......              ...+.+|+.++.+++|+||+++++.+...
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            457899999999999994 468899999885322111              12477999999999999999999999999


Q ss_pred             CeeEEEEecCCCCCHHHHHhc
Q 008332          533 EERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      +..+++|||+. |+|.+++..
T Consensus        93 ~~~~lv~e~~~-~~l~~~l~~  112 (335)
T PTZ00024         93 DFINLVMDIMA-SDLKKVVDR  112 (335)
T ss_pred             CcEEEEEeccc-cCHHHHHHh
Confidence            99999999997 699999875

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.50  E-value=7.3e-07  Score=89.35  Aligned_cols=88  Identities=28%  Similarity=0.402  Sum_probs=72.7

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +...+.||+|+||.||+|.. ..++.+++|.+.....   .....+.+|+.++.+++|||++++.+++......++|+||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            44457899999999999984 4588999999863222   2335688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +. |+|.+++...
T Consensus       103 ~~-~~l~~~l~~~  114 (313)
T cd06633         103 CL-GSASDLLEVH  114 (313)
T ss_pred             CC-CCHHHHHHhc
Confidence            96 6888888653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.49  E-value=5.4e-07  Score=95.84  Aligned_cols=100  Identities=26%  Similarity=0.417  Sum_probs=81.3

Q ss_pred             ChHHHHHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEe-
Q 008332          455 SLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID-  531 (570)
Q Consensus       455 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~-  531 (570)
                      .++.+...++-+.+.+++|.|.+|.||++. .++++.+|+|++..... ..++...|..++... .|||++.++|++.. 
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            334445566778888999999999999999 77899999999864332 335567788888877 79999999999864 


Q ss_pred             ----CCeeEEEEecCCCCCHHHHHhcCC
Q 008332          532 ----SEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       532 ----~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                          ++++|||||||.+||.-+++.+-.
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~  116 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK  116 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhc
Confidence                368999999999999999998765

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.49  E-value=4.7e-07  Score=89.51  Aligned_cols=89  Identities=22%  Similarity=0.294  Sum_probs=74.2

Q ss_pred             cccceeeeccCCccEEEEEe----cCCcEEEEEEecCCCc----ccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeE
Q 008332          466 FSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTST----QGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~~----~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  536 (570)
                      |+..+.||+|++|.||++..    .+++.+|||.++....    ...+.+.+|+.++.++ +|||++++.+.+......+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            56678999999999999873    3467899999864321    2235688999999999 6999999999998888999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +||||+++|+|.+++...
T Consensus        82 lv~e~~~~~~L~~~~~~~   99 (288)
T cd05583          82 LILDYVNGGELFTHLYQR   99 (288)
T ss_pred             EEEecCCCCcHHHHHhhc
Confidence            999999999999999753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.48  E-value=8.4e-07  Score=86.72  Aligned_cols=97  Identities=18%  Similarity=0.196  Sum_probs=69.7

Q ss_pred             hcCccccee--eeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNK--LGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~--lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .+++.+.+.  ||+|+||.||++.. .++..+++|.+........     |+.....+ +|||++++++.+...+..++|
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence            344444454  59999999999994 5578899999854322111     22222222 799999999999999999999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      |||+++|+|.+++....    .+++.+++.
T Consensus        88 ~e~~~~~~L~~~l~~~~----~l~~~~~~~  113 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEG----KLSEAEVKK  113 (267)
T ss_pred             EEcCCCCcHHHHHHhcC----CCCHHHHHH
Confidence            99999999999998643    455555443

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.48  E-value=4.9e-07  Score=91.26  Aligned_cols=92  Identities=24%  Similarity=0.329  Sum_probs=75.5

Q ss_pred             HHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEe-CCeeE
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCID-SEERM  536 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~-~~~~~  536 (570)
                      ...++|+..+.||+|+||.||++. ..+++.+|+|++...  .....+.+.+|+.++.+++|||++++.+++.. ....+
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            355678889999999999999998 456889999988532  22234668899999999999999999998876 45788


Q ss_pred             EEEecCCCCCHHHHHhc
Q 008332          537 LIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~  553 (570)
                      +++||+ +++|.++++.
T Consensus        87 lv~e~~-~~~L~~~~~~  102 (328)
T cd07856          87 FVTELL-GTDLHRLLTS  102 (328)
T ss_pred             EEeehh-ccCHHHHHhc
Confidence            999998 5699998874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.47  E-value=6.7e-07  Score=86.88  Aligned_cols=85  Identities=18%  Similarity=0.279  Sum_probs=67.1

Q ss_pred             eeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHH-ccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTA-KLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~-~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||++.. ..++.+|+|.++....   .....+..|..++. ..+|+|++++++.+...+..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5689999999999985 4588999999864322   12233455555444 45899999999999988999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|.+++...
T Consensus        82 ~~L~~~l~~~   91 (260)
T cd05611          82 GDCASLIKTL   91 (260)
T ss_pred             CCHHHHHHHc
Confidence            9999999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.47  E-value=5.8e-07  Score=90.79  Aligned_cols=83  Identities=19%  Similarity=0.217  Sum_probs=66.7

Q ss_pred             eeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc---CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          472 LGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL---QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       472 lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l---~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      ||+|+||.||++.. .+++.+|+|++....   ......+..|..++...   +||||+++...+......++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999984 558899999985321   12223455676666654   699999999999999999999999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|.+++...
T Consensus        81 g~L~~~l~~~   90 (330)
T cd05586          81 GELFWHLQKE   90 (330)
T ss_pred             ChHHHHHHhc
Confidence            9999998753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.46  E-value=7e-07  Score=91.39  Aligned_cols=90  Identities=24%  Similarity=0.307  Sum_probs=72.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC------
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------  533 (570)
                      ..+|+..+.||+|+||.||++.. ..++.+|+|.+...  .......+.+|+.++..++||||+++++++....      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            46788899999999999999984 56889999998632  2233457889999999999999999999886543      


Q ss_pred             eeEEEEecCCCCCHHHHHhc
Q 008332          534 ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ..++||||+++ +|.+.++.
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~  118 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIHM  118 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHhc
Confidence            47999999975 67777653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.46  E-value=7.1e-07  Score=89.22  Aligned_cols=88  Identities=31%  Similarity=0.411  Sum_probs=73.0

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      |+..+.||+|+||.||++.. .+++.+++|.+...   .......+.+|+.++.+++|+|++++.+++......++|+||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            55567899999999999994 45788999988532   222345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +. |+|.+++...
T Consensus        97 ~~-~~l~~~~~~~  108 (308)
T cd06634          97 CL-GSASDLLEVH  108 (308)
T ss_pred             cC-CCHHHHHHHc
Confidence            96 6898887643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.46  E-value=8.2e-07  Score=87.72  Aligned_cols=89  Identities=27%  Similarity=0.460  Sum_probs=68.1

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHcc---CCCCccceeEEEEeC-----C
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKL---QHVNLIRVLGFCIDS-----E  533 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l---~h~niv~l~g~~~~~-----~  533 (570)
                      +|...+.||+|+||.||++.. .+++.||+|.++...  ......+.+|+.++..+   +||||+++++++...     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            366778999999999999984 568899999986422  12223456777776655   799999999987642     3


Q ss_pred             eeEEEEecCCCCCHHHHHhcC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..++++||++ ++|.+++...
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~  100 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKV  100 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhc
Confidence            5789999998 4899998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.46  E-value=8.4e-07  Score=88.60  Aligned_cols=91  Identities=20%  Similarity=0.359  Sum_probs=72.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCC------
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------  533 (570)
                      .++|+..+.||+|+||.||++.. .+++.+|+|.+....  ......+.+|+.++.+++||||++++++|....      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            34588889999999999999994 468899999885322  222345678999999999999999999987654      


Q ss_pred             --eeEEEEecCCCCCHHHHHhcC
Q 008332          534 --ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 --~~~lv~e~~~~GsL~~~L~~~  554 (570)
                        ..++|+||+.+ +|.+++...
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~~  112 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSNK  112 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHhc
Confidence              34999999974 899888754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.45  E-value=4.1e-07  Score=87.68  Aligned_cols=83  Identities=24%  Similarity=0.307  Sum_probs=71.5

Q ss_pred             eeccCCccEEEEEec-CCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCH
Q 008332          472 LGEGGYGPVYKGVLP-CGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL  547 (570)
Q Consensus       472 lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL  547 (570)
                      ||+|+||.||++... +++.+++|.+.....   .....+..|+.++.+++|||++++++.+......+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999953 588999999864322   2345788999999999999999999999888999999999999999


Q ss_pred             HHHHhcC
Q 008332          548 DCYLFGL  554 (570)
Q Consensus       548 ~~~L~~~  554 (570)
                      .+++...
T Consensus        81 ~~~l~~~   87 (250)
T cd05123          81 FSHLSKE   87 (250)
T ss_pred             HHHHHhc
Confidence            9999864

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.45  E-value=9.2e-07  Score=89.86  Aligned_cols=91  Identities=22%  Similarity=0.337  Sum_probs=73.7

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----  533 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----  533 (570)
                      ..++|+..+.||+|+||.||++. ..++..||||++....  ......+.+|+.++.+++||||+++.+++....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            35678888999999999999998 4568899999985322  222356889999999999999999999887553     


Q ss_pred             -eeEEEEecCCCCCHHHHHhc
Q 008332          534 -ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 -~~~lv~e~~~~GsL~~~L~~  553 (570)
                       ..++|+||+ +++|.+++..
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~  112 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKH  112 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhc
Confidence             358999999 6799988864

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.44  E-value=4e-07  Score=91.96  Aligned_cols=89  Identities=25%  Similarity=0.380  Sum_probs=74.6

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----eeE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----ERM  536 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~  536 (570)
                      +|.+.+.||+|++|.||++.. ..++.+++|.+....  ....+.+.+|+.++..++|+||+++.+++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            366779999999999999995 448899999986433  334467999999999999999999999987765     789


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +++||++ ++|.++++..
T Consensus        81 lv~e~~~-~~l~~~l~~~   97 (330)
T cd07834          81 IVTELME-TDLHKVIKSP   97 (330)
T ss_pred             EEecchh-hhHHHHHhCC
Confidence            9999998 4899998754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.43  E-value=7.3e-07  Score=92.36  Aligned_cols=85  Identities=14%  Similarity=0.150  Sum_probs=71.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEec---CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP---CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~---~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ...+|.+.+.||+|+||.||++...   .+..|++|.+...     ..+.+|+.++.+++||||+++++.+......+++
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv  164 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV  164 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence            3456889999999999999999743   3568999987532     2356899999999999999999999888999999


Q ss_pred             EecCCCCCHHHHHh
Q 008332          539 YEYMPNKSLDCYLF  552 (570)
Q Consensus       539 ~e~~~~GsL~~~L~  552 (570)
                      ||++. ++|.+++.
T Consensus       165 ~e~~~-~~l~~~l~  177 (392)
T PHA03207        165 MPKYK-CDLFTYVD  177 (392)
T ss_pred             ehhcC-CCHHHHHH
Confidence            99996 68999984

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.43  E-value=6.3e-07  Score=91.07  Aligned_cols=89  Identities=28%  Similarity=0.391  Sum_probs=74.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC----------
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS----------  532 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~----------  532 (570)
                      .+|...+.||+|+||.||+|.. .+++.|++|.+........+.+.+|+.++.+++||||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            5678889999999999999994 56889999998655555567788999999999999999998765543          


Q ss_pred             ----CeeEEEEecCCCCCHHHHHhc
Q 008332          533 ----EERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       533 ----~~~~lv~e~~~~GsL~~~L~~  553 (570)
                          ...++|+||++ ++|.+++..
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~  108 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ  108 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc
Confidence                35789999997 599998864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.41  E-value=3.1e-07  Score=88.43  Aligned_cols=90  Identities=23%  Similarity=0.376  Sum_probs=74.0

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecC--CCcccHHHHHHHHHHHHccCCCCccceeEEEEeC-----CeeE
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-----EERM  536 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~--~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-----~~~~  536 (570)
                      .+...+.||+|++|.|+++. ..+|+.||||++..  ......+.-.+|+.+++.++|+||+.+..+...+     ..+|
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence            34446889999999999998 56689999999963  3334456788999999999999999999988762     4789


Q ss_pred             EEEecCCCCCHHHHHhcCC
Q 008332          537 LIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~  555 (570)
                      +|+|+|+. +|+..|+...
T Consensus       103 iV~elMet-DL~~iik~~~  120 (359)
T KOG0660|consen  103 LVFELMET-DLHQIIKSQQ  120 (359)
T ss_pred             EehhHHhh-HHHHHHHcCc
Confidence            99999965 9999998654

>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins

Probab=98.41  E-value=2.1e-06  Score=85.39  Aligned_cols=158  Identities=11%  Similarity=0.068  Sum_probs=102.5

Q ss_pred             HHHHHHhhCCCceEEEEEcCCCCCCcccccccccC-hHHHHHHHHHHHHHHHHcCCCceeeeccCCC-CCCCccchhhhH
Q 008332           79 FADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRN-SSHRKSFIDSSIRIARLYGFRGLDFAWTAPN-TSTDMFNIGLLF  156 (570)
Q Consensus        79 ~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~-~~~r~~fi~siv~~~~~~~~DGidiDwE~p~-~~~~~~~~~~l~  156 (570)
                      .+++++++  ++||+-.|--...........++.+ ++.+..+|+.++++++.|||||+-||+|... ..+++.++..|+
T Consensus        51 ~idaAHkn--GV~Vlgti~~e~~~~~~~~~~lL~~~~~~~~~~a~kLv~lak~yGfDGw~iN~E~~~~~~~~~~~l~~F~  128 (339)
T cd06547          51 WINAAHRN--GVPVLGTFIFEWTGQVEWLEDFLKKDEDGSFPVADKLVEVAKYYGFDGWLINIETELGDAEKAKRLIAFL  128 (339)
T ss_pred             HHHHHHhc--CCeEEEEEEecCCCchHHHHHHhccCcccchHHHHHHHHHHHHhCCCceEeeeeccCCcHHHHHHHHHHH
Confidence            34446555  7999988863322234457888888 9999999999999999999999999999876 567889999999


Q ss_pred             HHHHHHHhhhhhcccccccceEEEEeecccCCC---C---CccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCC
Q 008332          157 DEWRIAATKLDAKNSTRQQSLLILTARFRYSPP---A---NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGS  230 (570)
Q Consensus       157 ~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~  230 (570)
                      ++|++++++.      .....++---++.....   .   ...+.. ..+.+|-+ ...|     ++..           
T Consensus       129 ~~L~~~~~~~------~~~~~v~WYDs~t~~G~l~wQn~Ln~~N~~-ff~~~D~~-FlNY-----~W~~-----------  184 (339)
T cd06547         129 RYLKAKLHEN------VPGSLVIWYDSMTEDGKLSWQNELNSKNKP-FFDVCDGI-FLNY-----WWTE-----------  184 (339)
T ss_pred             HHHHHHHhhc------CCCcEEEEEecCCCCCccchhhhhhHHHHH-HHhhhcce-eEec-----CCCc-----------
Confidence            9999999842      11222221111111100   0   111111 11334422 1122     1211           


Q ss_pred             CCCCCccCHHHHHHHHHHcCCCCCceeeecccccccee
Q 008332          231 ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWT  268 (570)
Q Consensus       231 ~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~  268 (570)
                            ...+.+++.....|..+.+|-+||=..||...
T Consensus       185 ------~~l~~s~~~a~~~g~~~~dvy~GiDv~grg~~  216 (339)
T cd06547         185 ------ESLERSVQLAEGLGRSPYDVYVGVDVWGRGTK  216 (339)
T ss_pred             ------chHHHHHHHHHHcCCCHhHEEEEEEEEcCCcc
Confidence                  14455566667789999999999999998873

The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment mod

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.41  E-value=4.8e-07  Score=88.99  Aligned_cols=87  Identities=31%  Similarity=0.441  Sum_probs=73.9

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      +..+.||+|.+|.||+|.. .+++.+++|.+....  ....+.+..|+.++.+++|+|++++.+.+......++|+||++
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            4457899999999999995 458899999986442  2334578899999999999999999999998899999999998


Q ss_pred             CCCHHHHHhcC
Q 008332          544 NKSLDCYLFGL  554 (570)
Q Consensus       544 ~GsL~~~L~~~  554 (570)
                       ++|.+++...
T Consensus        82 -~~l~~~i~~~   91 (282)
T cd07829          82 -MDLKKYLDKR   91 (282)
T ss_pred             -cCHHHHHHhh
Confidence             5999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.41  E-value=1.2e-06  Score=86.10  Aligned_cols=84  Identities=23%  Similarity=0.247  Sum_probs=64.3

Q ss_pred             eeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHH---ccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          471 KLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTA---KLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~---~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      +||+|+||.||++.. .+++.+|+|.+.....   .....+.+|..++.   ..+|||++.+.+.+...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999995 5588999998854221   11223444543333   3479999999999988889999999999


Q ss_pred             CCCHHHHHhcC
Q 008332          544 NKSLDCYLFGL  554 (570)
Q Consensus       544 ~GsL~~~L~~~  554 (570)
                      +|+|.+++...
T Consensus        81 ~~~L~~~i~~~   91 (279)
T cd05633          81 GGDLHYHLSQH   91 (279)
T ss_pred             CCCHHHHHHhc
Confidence            99999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.40  E-value=7.6e-07  Score=90.26  Aligned_cols=91  Identities=27%  Similarity=0.502  Sum_probs=73.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeC--CeeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS--EERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~--~~~~  536 (570)
                      ..+|...+.||+|+||.||+|.. .+++.+++|++...  .......+.+|+.++.++ +||||+++++++...  ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            35677789999999999999995 45789999988532  223345678899999999 999999999988654  3689


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +|+||++ ++|.+++.+.
T Consensus        86 lv~e~~~-~~L~~~~~~~  102 (337)
T cd07852          86 LVFEYME-TDLHAVIRAN  102 (337)
T ss_pred             EEecccc-cCHHHHHhcC
Confidence            9999997 5999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.40  E-value=1.3e-06  Score=89.60  Aligned_cols=90  Identities=21%  Similarity=0.267  Sum_probs=72.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC------C
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------E  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------~  533 (570)
                      ..+|+..+.||+|+||.||++.. ..++.+|||.+...  .......+.+|+.++..++||||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            46788899999999999999984 45789999998642  223345788999999999999999999987543      3


Q ss_pred             eeEEEEecCCCCCHHHHHhc
Q 008332          534 ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ..++||||+++ +|.+++..
T Consensus       103 ~~~lv~e~~~~-~l~~~~~~  121 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQM  121 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHHh
Confidence            57999999975 78887753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.40  E-value=7e-07  Score=90.74  Aligned_cols=91  Identities=25%  Similarity=0.332  Sum_probs=72.8

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC------
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------  532 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------  532 (570)
                      ..++|+..+.||+|+||.||++. ..+++.||||.+....  ......+.+|+.++.+++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            34668888999999999999998 4567899999986432  22345678999999999999999999887543      


Q ss_pred             CeeEEEEecCCCCCHHHHHhc
Q 008332          533 EERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ...++++|++ +++|.+++..
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~  112 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKC  112 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhc
Confidence            3568999988 7799988764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PRK10345 hypothetical protein; Provisional

Probab=98.40  E-value=1.4e-06  Score=81.15  Aligned_cols=85  Identities=18%  Similarity=0.196  Sum_probs=66.6

Q ss_pred             cceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-----CCCCccceeEEEEeCC---eeE-EE
Q 008332          468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-----QHVNLIRVLGFCIDSE---ERM-LI  538 (570)
Q Consensus       468 ~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-----~h~niv~l~g~~~~~~---~~~-lv  538 (570)
                      -.+.||+|+||.||. ...+... +||++........+.+.+|+.++..+     .||||++++|...+..   ..+ +|
T Consensus         6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            357899999999996 4444444 69988654444556799999999999     5799999999998763   333 78


Q ss_pred             Eec--CCCCCHHHHHhcC
Q 008332          539 YEY--MPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~--~~~GsL~~~L~~~  554 (570)
                      +||  ++.|+|.++|.+.
T Consensus        84 ~e~~G~~~~tL~~~l~~~  101 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC  101 (210)
T ss_pred             ecCCCCcchhHHHHHHcc
Confidence            999  6689999999753

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.40  E-value=1.4e-06  Score=88.59  Aligned_cols=96  Identities=25%  Similarity=0.331  Sum_probs=76.5

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC-
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-  532 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-  532 (570)
                      .++...+++|...+.||+|+||.||++. ..+++.||+|++....  ....+.+.+|+.++.+++||||+++.+++... 
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~   89 (345)
T cd07877          10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   89 (345)
T ss_pred             HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence            4455667889999999999999999998 4568899999986432  22345688999999999999999999987643 


Q ss_pred             -----CeeEEEEecCCCCCHHHHHhc
Q 008332          533 -----EERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       533 -----~~~~lv~e~~~~GsL~~~L~~  553 (570)
                           ...+++++++ +++|.+++..
T Consensus        90 ~~~~~~~~~lv~~~~-~~~L~~~~~~  114 (345)
T cd07877          90 SLEEFNDVYLVTHLM-GADLNNIVKC  114 (345)
T ss_pred             cccccccEEEEehhc-ccCHHHHHhc
Confidence                 2367888876 7899988764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.39  E-value=1e-06  Score=89.23  Aligned_cols=90  Identities=21%  Similarity=0.344  Sum_probs=73.0

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC-----Cee
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-----EER  535 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  535 (570)
                      .+|...+.||+|+||.||++. ..+++.|++|.+...  .......+.+|+.++..++|+||+++.+++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            457888999999999999998 456889999998642  223345678899999999999999999987654     247


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++++||+. ++|.+++...
T Consensus        85 ~lv~e~~~-~~L~~~~~~~  102 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSS  102 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcC
Confidence            99999996 6899998753

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.39  E-value=7.8e-07  Score=89.14  Aligned_cols=85  Identities=19%  Similarity=0.173  Sum_probs=68.6

Q ss_pred             ceeeeccCCccEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          469 RNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .+.+|.|+++.|+++.. +++.+|+|++...  .....+.+.+|+.++..++|+||+++++++...+..+++|||+++|+
T Consensus         7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            34445555555555554 5889999998643  33445679999999999999999999999999999999999999999


Q ss_pred             HHHHHhcC
Q 008332          547 LDCYLFGL  554 (570)
Q Consensus       547 L~~~L~~~  554 (570)
                      |.+++.+.
T Consensus        86 l~~~l~~~   93 (314)
T cd08216          86 CEDLLKTH   93 (314)
T ss_pred             HHHHHHHh
Confidence            99999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.39  E-value=7.9e-07  Score=90.01  Aligned_cols=90  Identities=18%  Similarity=0.320  Sum_probs=73.3

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEe----CCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCID----SEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~----~~~~~  536 (570)
                      .+|+..+.||+|+||.||++. ..++..|++|++....  ......+.+|+.++.+++||||+++.+.+..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            567788999999999999999 4568899999986432  2334667889999999999999999987753    24689


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +|+||+. |+|.+++...
T Consensus        85 lv~e~~~-~~l~~~~~~~  101 (334)
T cd07855          85 VVMDLME-SDLHHIIHSD  101 (334)
T ss_pred             EEEehhh-hhHHHHhccC
Confidence            9999996 6999998753

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.37  E-value=1.2e-07  Score=89.57  Aligned_cols=92  Identities=21%  Similarity=0.195  Sum_probs=78.0

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|..+++||+|.||+|..++ ...++.+|+|++++.-   ......-+.|-+++.+.+||.+..|.-.+...+.++.||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            457777999999999999998 6678999999997532   233344678999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      ||..+|.|.-+|...+
T Consensus       248 eyanGGeLf~HLsrer  263 (516)
T KOG0690|consen  248 EYANGGELFFHLSRER  263 (516)
T ss_pred             EEccCceEeeehhhhh
Confidence            9999999999887543

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.36  E-value=2e-06  Score=86.29  Aligned_cols=82  Identities=24%  Similarity=0.304  Sum_probs=66.2

Q ss_pred             ceeeeccCCccEEEEEec---CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEEEecCC
Q 008332          469 RNKLGEGGYGPVYKGVLP---CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLIYEYMP  543 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~---~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e~~~  543 (570)
                      .+.||+|+||.||+|...   .++.+|+|.+....  ....+.+|+.++.+++||||+++.+.+...  ...++++||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            367999999999999843   45789999986432  224578899999999999999999988643  46889999996


Q ss_pred             CCCHHHHHhc
Q 008332          544 NKSLDCYLFG  553 (570)
Q Consensus       544 ~GsL~~~L~~  553 (570)
                      + +|.+++..
T Consensus        84 ~-~l~~~~~~   92 (317)
T cd07868          84 H-DLWHIIKF   92 (317)
T ss_pred             C-CHHHHHHh
Confidence            4 89988864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.35  E-value=1.3e-06  Score=89.21  Aligned_cols=91  Identities=22%  Similarity=0.265  Sum_probs=72.9

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC------
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------  532 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------  532 (570)
                      ..++|+..+.||+|+||.||++.. ..++.+|+|.+....  ......+.+|+.++..++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            346788899999999999999984 458899999986432  23345788999999999999999999987644      


Q ss_pred             CeeEEEEecCCCCCHHHHHhc
Q 008332          533 EERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ...++||||+++ +|.+++..
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~~  114 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQM  114 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHhh
Confidence            247999999975 77777653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.35  E-value=1.2e-06  Score=86.06  Aligned_cols=87  Identities=29%  Similarity=0.405  Sum_probs=73.4

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      ...+.||+|++|.||++.. .+++.+++|.+.....  .....+.+|+.++.+++|+|++++.+.+..+...++++||++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence            3457899999999999985 4688999999864332  234678899999999999999999999999999999999997


Q ss_pred             CCCHHHHHhcC
Q 008332          544 NKSLDCYLFGL  554 (570)
Q Consensus       544 ~GsL~~~L~~~  554 (570)
                      + +|.+++...
T Consensus        82 ~-~l~~~l~~~   91 (283)
T cd05118          82 T-DLYKLIKDR   91 (283)
T ss_pred             C-CHHHHHHhh
Confidence            5 999998864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.35  E-value=6.2e-08  Score=98.98  Aligned_cols=88  Identities=22%  Similarity=0.411  Sum_probs=75.4

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.+.-.||.|+||.||++.- ..+-..|.|.+........++|+-|+++|....||+||+|++.+...+.++|+.|||.|
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence            34446789999999999984 44556788888666666778899999999999999999999999999999999999999


Q ss_pred             CCHHHHHhc
Q 008332          545 KSLDCYLFG  553 (570)
Q Consensus       545 GsL~~~L~~  553 (570)
                      |-....+.+
T Consensus       114 GAVDaimlE  122 (1187)
T KOG0579|consen  114 GAVDAIMLE  122 (1187)
T ss_pred             chHhHHHHH
Confidence            999888764

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.35  E-value=2.4e-06  Score=84.19  Aligned_cols=99  Identities=26%  Similarity=0.389  Sum_probs=74.0

Q ss_pred             cccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHHcc---CCCCccceeEEEEeCCe-----
Q 008332          466 FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST--QGFEEFKNEVMLTAKL---QHVNLIRVLGFCIDSEE-----  534 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l---~h~niv~l~g~~~~~~~-----  534 (570)
                      |++.+.||+|+||.||++... +++.+|+|.++....  .....+.+|+.++.++   +|+|++++.+.+...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            345689999999999999965 488999999963322  2234566787776655   69999999999988776     


Q ss_pred             eEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          535 RMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      .++++||++ ++|.+++.....  ..+++.+++
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~  110 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPK--PGLPPETIK  110 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccC--CCCCHHHHH
Confidence            899999997 489999875432  234554443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.34  E-value=2.7e-06  Score=85.27  Aligned_cols=82  Identities=24%  Similarity=0.309  Sum_probs=66.1

Q ss_pred             ceeeeccCCccEEEEEec---CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEe--CCeeEEEEecCC
Q 008332          469 RNKLGEGGYGPVYKGVLP---CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID--SEERMLIYEYMP  543 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~---~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e~~~  543 (570)
                      ...||+|+||.||+|...   .+..+|+|.+....  ....+.+|+.++.+++||||+++.+++..  ....++|+||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            367999999999999854   34689999885432  22457899999999999999999998864  356789999987


Q ss_pred             CCCHHHHHhc
Q 008332          544 NKSLDCYLFG  553 (570)
Q Consensus       544 ~GsL~~~L~~  553 (570)
                      + +|.+++..
T Consensus        84 ~-~l~~~~~~   92 (317)
T cd07867          84 H-DLWHIIKF   92 (317)
T ss_pred             C-cHHHHHHh
Confidence            5 88888763

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.34  E-value=1.7e-06  Score=87.60  Aligned_cols=89  Identities=24%  Similarity=0.365  Sum_probs=72.8

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----eeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----ERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~  536 (570)
                      ++|++.+.||+|+||.||++. ..+++.||+|.+.... ......+.+|+.++.+++|+||+++.+.+....     ..+
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence            568888999999999999998 4568899999986432 223456889999999999999999998876543     579


Q ss_pred             EEEecCCCCCHHHHHhc
Q 008332          537 LIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~  553 (570)
                      +++||+.+ +|.+++..
T Consensus        85 lv~e~~~~-~l~~~~~~  100 (336)
T cd07849          85 IVQELMET-DLYKLIKT  100 (336)
T ss_pred             EEehhccc-CHHHHHhc
Confidence            99999975 88888764

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.34  E-value=2.2e-06  Score=87.50  Aligned_cols=91  Identities=23%  Similarity=0.319  Sum_probs=73.7

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC------
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------  532 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------  532 (570)
                      ...+|+..+.||+|+||.||++. ..+++.+|+|.+...  .......+.+|+.++.+++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            34678888999999999999999 456889999998532  223345678899999999999999999987644      


Q ss_pred             CeeEEEEecCCCCCHHHHHhc
Q 008332          533 EERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ...++|+||+. |+|.+.+..
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~  113 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQM  113 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhh
Confidence            24699999996 589988764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.34  E-value=2.7e-06  Score=83.65  Aligned_cols=93  Identities=23%  Similarity=0.230  Sum_probs=68.3

Q ss_pred             eeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHH---HHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          471 KLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVM---LTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~---~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      +||+|+||.||++.. ..++.||+|.+.....   .....+..|..   .+....||+++++.+.+...+..++|+||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            479999999999984 5588999999864321   11122444433   3444589999999999998899999999999


Q ss_pred             CCCHHHHHhcCCCCcccccHhhhh
Q 008332          544 NKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       544 ~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +|+|.+++...    ..+++.+++
T Consensus        81 g~~L~~~l~~~----~~l~~~~~~  100 (278)
T cd05606          81 GGDLHYHLSQH----GVFSEAEMR  100 (278)
T ss_pred             CCcHHHHHHhc----CCCCHHHHH
Confidence            99999998643    235555443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.29  E-value=2.9e-06  Score=84.20  Aligned_cols=89  Identities=22%  Similarity=0.366  Sum_probs=71.7

Q ss_pred             cCcccceeeeccCCccEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|...+.||+|+||.||++.... ++.+|||.++... ......+.+|+.++.+. .||||+++++.+......++++|
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            456777999999999999999654 8899999986432 23345677788777776 59999999999999999999999


Q ss_pred             cCCCCCHHHHHhc
Q 008332          541 YMPNKSLDCYLFG  553 (570)
Q Consensus       541 ~~~~GsL~~~L~~  553 (570)
                      |++ ++|..++..
T Consensus        95 ~~~-~~l~~l~~~  106 (296)
T cd06618          95 LMS-TCLDKLLKR  106 (296)
T ss_pred             ccC-cCHHHHHHH
Confidence            985 477777654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.27  E-value=1.2e-07  Score=97.85  Aligned_cols=91  Identities=23%  Similarity=0.425  Sum_probs=79.9

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +.++|.+...+|.|.+|.|||++ .+.++.+|+|.++-.........+.|+-+++..+||||+.++|.....+.+++.||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            45678888999999999999999 67789999999975555556667889999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHh
Q 008332          541 YMPNKSLDCYLF  552 (570)
Q Consensus       541 ~~~~GsL~~~L~  552 (570)
                      ||.+|+|.+--+
T Consensus        93 ycgggslQdiy~  104 (829)
T KOG0576|consen   93 YCGGGSLQDIYH  104 (829)
T ss_pred             ecCCCcccceee
Confidence            999999998654

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.27  E-value=5.1e-07  Score=92.83  Aligned_cols=90  Identities=26%  Similarity=0.365  Sum_probs=72.2

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEec--C--CCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCe--eEEEE
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLS--K--TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE--RMLIY  539 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~--~--~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~--~~lv~  539 (570)
                      +..++||+|+|-+||+|.. ..|..||--.++  .  ..+...+.|..|+.+|+.|+||||++++..+.+...  .-+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            4558999999999999984 346666654442  1  234455789999999999999999999998887654  77899


Q ss_pred             ecCCCCCHHHHHhcCCC
Q 008332          540 EYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~  556 (570)
                      |++..|+|+.|+++.+.
T Consensus       123 EL~TSGtLr~Y~kk~~~  139 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHRR  139 (632)
T ss_pred             ecccCCcHHHHHHHhcc
Confidence            99999999999987654

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.25  E-value=6.4e-06  Score=76.49  Aligned_cols=83  Identities=33%  Similarity=0.499  Sum_probs=72.1

Q ss_pred             eeccCCccEEEEEecC-CcEEEEEEecCCCcc-cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCHHH
Q 008332          472 LGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDC  549 (570)
Q Consensus       472 lg~G~fg~V~~~~~~~-~~~vavK~l~~~~~~-~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL~~  549 (570)
                      ||+|.+|.||++.... ++.+++|.+...... ..+.+.+|+..+..++|++++++++.+......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999654 889999998644332 34679999999999999999999999998889999999999999999


Q ss_pred             HHhcC
Q 008332          550 YLFGL  554 (570)
Q Consensus       550 ~L~~~  554 (570)
                      ++...
T Consensus        81 ~~~~~   85 (215)
T cd00180          81 LLKEN   85 (215)
T ss_pred             HHHhc
Confidence            99864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.25  E-value=2.4e-06  Score=84.33  Aligned_cols=85  Identities=20%  Similarity=0.354  Sum_probs=68.8

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++...+.||+|+||.||++.. .+++.+|+|.+.... ......+.+|+.++.++. |+||+++++.+......++++||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            344567899999999999984 558899999986432 234457899999999995 99999999999888899999999


Q ss_pred             CCCCCHHHH
Q 008332          542 MPNKSLDCY  550 (570)
Q Consensus       542 ~~~GsL~~~  550 (570)
                      +.. +|.++
T Consensus        85 ~~~-~l~~l   92 (288)
T cd06616          85 MDI-SLDKF   92 (288)
T ss_pred             ccC-CHHHH
Confidence            864 66554

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.23  E-value=2.2e-06  Score=87.11  Aligned_cols=90  Identities=24%  Similarity=0.362  Sum_probs=73.2

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCe-----
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE-----  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~-----  534 (570)
                      .++|.....||+|++|.||++.. .+++.+++|.+...  .......+.+|+.++++++|+|++++.+.+...+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            45688889999999999999995 45789999998542  22233567889999999999999999987765554     


Q ss_pred             -eEEEEecCCCCCHHHHHhc
Q 008332          535 -RMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       535 -~~lv~e~~~~GsL~~~L~~  553 (570)
                       .++|+||+ +++|.+++..
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~  112 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC  112 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc
Confidence             89999999 5699999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.23  E-value=1.8e-07  Score=103.21  Aligned_cols=93  Identities=29%  Similarity=0.455  Sum_probs=78.2

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+....||.|.||.||.+. .++|...|+|.++-.  ........-+|+.++..++|||+|+.+|+....+..+|-||||
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            3456789999999999999 788999999988532  2233356778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCc
Q 008332          543 PNKSLDCYLFGLSHQK  558 (570)
Q Consensus       543 ~~GsL~~~L~~~~~~~  558 (570)
                      ++|+|.+.+.-.+...
T Consensus      1317 ~~GsLa~ll~~gri~d 1332 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGRIED 1332 (1509)
T ss_pred             ccCcHHHHHHhcchhh
Confidence            9999999998655443

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.22  E-value=5.4e-07  Score=88.56  Aligned_cols=93  Identities=23%  Similarity=0.370  Sum_probs=74.4

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecC---CCccc----HHHHHHHHHHHHccCCCCccceeEEEEeC-C
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK---TSTQG----FEEFKNEVMLTAKLQHVNLIRVLGFCIDS-E  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~---~~~~~----~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~  533 (570)
                      .++|.++.+||+|+|..||++. +...+.||||+-..   +....    .+...+|-++.+.|.||.||+++.++.-. +
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            4557778999999999999999 56678899997531   21111    23467899999999999999999987654 6


Q ss_pred             eeEEEEecCCCCCHHHHHhcCC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ..+-|+|||++-+|..||...+
T Consensus       542 sFCTVLEYceGNDLDFYLKQhk  563 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYLKQHK  563 (775)
T ss_pred             cceeeeeecCCCchhHHHHhhh
Confidence            7889999999999999998543

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.22  E-value=3.8e-06  Score=83.86  Aligned_cols=91  Identities=26%  Similarity=0.411  Sum_probs=72.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCC------
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------  533 (570)
                      .++|++.+.||+|+||.||++.. .+++.+++|.+.....  .....+.+|+.++.+++||||+++.+.+....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            45788889999999999999994 4688999998853322  22345778999999999999999998875443      


Q ss_pred             --eeEEEEecCCCCCHHHHHhcC
Q 008332          534 --ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 --~~~lv~e~~~~GsL~~~L~~~  554 (570)
                        ..++|+||+.. +|..++...
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~  108 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENP  108 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhcc
Confidence              46899999975 788887753

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.20  E-value=2.5e-06  Score=78.42  Aligned_cols=81  Identities=14%  Similarity=0.110  Sum_probs=57.1

Q ss_pred             ceeeeccCCccEEEEEecCCcEEEEEEecCCCc--cc-------HHH-----------------HHHHHHHHHccCCCCc
Q 008332          469 RNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST--QG-------FEE-----------------FKNEVMLTAKLQHVNL  522 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~--~~-------~~~-----------------f~~e~~~l~~l~h~ni  522 (570)
                      ...||+|+||.||+|...+|+.||||+++....  ..       ...                 ...|...+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            367999999999999976899999999964321  11       011                 2348999999988776


Q ss_pred             cceeEEEEeCCeeEEEEecCCCCCHHHHH
Q 008332          523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL  551 (570)
Q Consensus       523 v~l~g~~~~~~~~~lv~e~~~~GsL~~~L  551 (570)
                      ......  .....+|||||+++++|...+
T Consensus        82 ~~p~~~--~~~~~~iVmE~i~g~~l~~~~  108 (190)
T cd05147          82 PCPEPI--LLKSHVLVMEFIGDDGWAAPR  108 (190)
T ss_pred             CCCcEE--EecCCEEEEEEeCCCCCcchh
Confidence            443322  122348999999998876653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.19  E-value=6.8e-06  Score=83.47  Aligned_cols=88  Identities=28%  Similarity=0.426  Sum_probs=70.8

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCC------e
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------E  534 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------~  534 (570)
                      .+|...+.||+|+||.||+|. ..+++.+|+|.+....  ......+.+|+.++.+++||||+++.+++....      .
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            568888999999999999999 4568899999986422  222356889999999999999999999886542      4


Q ss_pred             eEEEEecCCCCCHHHHHh
Q 008332          535 RMLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~  552 (570)
                      .++|+||+.. +|..++.
T Consensus        95 ~~lv~e~~~~-~l~~~~~  111 (342)
T cd07879          95 FYLVMPYMQT-DLQKIMG  111 (342)
T ss_pred             EEEEeccccc-CHHHHHc
Confidence            6899999975 7877653

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.18  E-value=6.8e-06  Score=78.39  Aligned_cols=80  Identities=25%  Similarity=0.371  Sum_probs=69.6

Q ss_pred             CCccEEEEEec-CCcEEEEEEecCCCccc-HHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCHHHHHhc
Q 008332          476 GYGPVYKGVLP-CGEVIAVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       476 ~fg~V~~~~~~-~~~~vavK~l~~~~~~~-~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      +||.||++... +++.+++|.+....... .+.+.+|+..+.+++|+|++++.+.+......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            47999999964 48899999997544433 67899999999999999999999999999999999999999999999986


Q ss_pred             CC
Q 008332          554 LS  555 (570)
Q Consensus       554 ~~  555 (570)
                      ..
T Consensus        81 ~~   82 (244)
T smart00220       81 RG   82 (244)
T ss_pred             cc
Confidence            43

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PTZ00284 protein kinase; Provisional

Probab=98.17  E-value=5.7e-06  Score=87.85  Aligned_cols=93  Identities=20%  Similarity=0.299  Sum_probs=69.1

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCC------CCccceeEEEEeC
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH------VNLIRVLGFCIDS  532 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h------~niv~l~g~~~~~  532 (570)
                      .....+|++.+.||+|+||.||++.. ..++.||||+++... .....+..|+.++.+++|      .+++.+..++...
T Consensus       125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~  203 (467)
T PTZ00284        125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE  203 (467)
T ss_pred             ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence            34457799999999999999999984 557889999985322 223345667777666644      4578888777654


Q ss_pred             -CeeEEEEecCCCCCHHHHHhcC
Q 008332          533 -EERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       533 -~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                       ...++|+|++ +++|.++|.+.
T Consensus       204 ~~~~~iv~~~~-g~~l~~~l~~~  225 (467)
T PTZ00284        204 TGHMCIVMPKY-GPCLLDWIMKH  225 (467)
T ss_pred             CceEEEEEecc-CCCHHHHHHHc
Confidence             4788999988 67899998754

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.13  E-value=9.8e-06  Score=75.85  Aligned_cols=90  Identities=10%  Similarity=0.047  Sum_probs=71.0

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccH---HH------HHHHHHHHHccCCCCccceeEEEEe
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF---EE------FKNEVMLTAKLQHVNLIRVLGFCID  531 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~---~~------f~~e~~~l~~l~h~niv~l~g~~~~  531 (570)
                      ....+|+..+++|.|+||.||.... ++..+++|.+++......   ..      |.+|+..+.++.|++|..+......
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            3457799999999999999998766 467899999964332222   12      6899999999999999998876443


Q ss_pred             C--------CeeEEEEecCCCCCHHHHH
Q 008332          532 S--------EERMLIYEYMPNKSLDCYL  551 (570)
Q Consensus       532 ~--------~~~~lv~e~~~~GsL~~~L  551 (570)
                      .        ...+|+|||+++.+|.++.
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhh
Confidence            3        3578999999999998874

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.13  E-value=7.4e-07  Score=83.96  Aligned_cols=92  Identities=23%  Similarity=0.290  Sum_probs=72.1

Q ss_pred             cCcccceeeeccCCccEEEEEe-c--C--CcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEe-CCee
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-P--C--GEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCID-SEER  535 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~--~--~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~-~~~~  535 (570)
                      ..|+....||+|.+|.||++.. +  +  ...+|+|.++....  .-.....+|+.++++++|||++.|..++.. ...+
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            3466668899999999999963 2  2  23689999864322  112457899999999999999999999887 5678


Q ss_pred             EEEEecCCCCCHHHHHhcCCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      ++++||.++ +|.+.|+-.+.
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~  123 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRA  123 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhcc
Confidence            999999998 99999885443

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.12  E-value=1.4e-05  Score=80.86  Aligned_cols=89  Identities=24%  Similarity=0.273  Sum_probs=69.4

Q ss_pred             CcccceeeeccCCccEEEEEec-C--CcEEEEEEecCCC--cccHHHHHHHHHHHHcc-CCCCccceeEEEEeC----Ce
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP-C--GEVIAVKKLSKTS--TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS----EE  534 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~-~--~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~----~~  534 (570)
                      +|.+.+.||+|+||.||++... .  +..+|+|.+....  ....+.+.+|+.++.++ +||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            3667789999999999999953 3  6789999986422  22345688999999999 599999999876543    34


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++++||+. ++|.+++...
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~   99 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG   99 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC
Confidence            688899986 6999998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.09  E-value=1.1e-05  Score=75.62  Aligned_cols=83  Identities=14%  Similarity=0.230  Sum_probs=67.6

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCCcc--------cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ--------GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~--------~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +.||+|++|.||+|.. .+..+++|........        ....+.+|+.++..+.|+++.....++......+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5789999999999987 4778999986532211        123578899999999999998877777777888999999


Q ss_pred             CCCCCHHHHHhc
Q 008332          542 MPNKSLDCYLFG  553 (570)
Q Consensus       542 ~~~GsL~~~L~~  553 (570)
                      +++++|.+++..
T Consensus        81 ~~G~~L~~~~~~   92 (211)
T PRK14879         81 IEGEPLKDLINS   92 (211)
T ss_pred             eCCcCHHHHHHh
Confidence            999999999865

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.06  E-value=2.1e-06  Score=79.47  Aligned_cols=90  Identities=21%  Similarity=0.303  Sum_probs=74.0

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC-----cc---cHHHHHHHHHHHHcc-CCCCccceeEEEEeCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS-----TQ---GFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSE  533 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~-----~~---~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~  533 (570)
                      ..+...++||+|..+.|.+|. ..+|+..|+|++....     ..   -.++-++|+.+++++ .||+|+.+...+..+.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            345667899999999998887 5668889999885221     11   123456899999998 7999999999999999


Q ss_pred             eeEEEEecCCCCCHHHHHhc
Q 008332          534 ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ..++|+|.|+.|.|.+||.+
T Consensus        97 F~FlVFdl~prGELFDyLts  116 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTS  116 (411)
T ss_pred             hhhhhhhhcccchHHHHhhh
Confidence            99999999999999999985

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.06  E-value=1e-05  Score=77.42  Aligned_cols=75  Identities=15%  Similarity=0.160  Sum_probs=61.8

Q ss_pred             cCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCHHHHHhc
Q 008332          475 GGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       475 G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      |.+|.||++. ..+++.+|+|.++...     .+.+|...+....|||++++.+.+......+++|||+++|+|.+++.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            7899999999 4568899999986432     234455555566799999999999988999999999999999999975


Q ss_pred             C
Q 008332          554 L  554 (570)
Q Consensus       554 ~  554 (570)
                      .
T Consensus        79 ~   79 (237)
T cd05576          79 F   79 (237)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.05  E-value=6.8e-06  Score=87.83  Aligned_cols=91  Identities=16%  Similarity=0.356  Sum_probs=67.7

Q ss_pred             hcCcccceeeeccCCccEEEEEecC--CcEEEEEE--------------ec---CCCcccHHHHHHHHHHHHccCCCCcc
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPC--GEVIAVKK--------------LS---KTSTQGFEEFKNEVMLTAKLQHVNLI  523 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~--~~~vavK~--------------l~---~~~~~~~~~f~~e~~~l~~l~h~niv  523 (570)
                      ..+|++.+.||+|+||.||+|..+.  +...+.|.              +.   .........+.+|+.++.+++||||+
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence            4678999999999999999987432  21222221              10   01112234688999999999999999


Q ss_pred             ceeEEEEeCCeeEEEEecCCCCCHHHHHhcC
Q 008332          524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       524 ~l~g~~~~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++++++...+..++++|++. ++|.+++...
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~  256 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYD-FDLYSFMYDE  256 (501)
T ss_pred             cEeEEEEECCeeEEEEeccc-cCHHHHHhhc
Confidence            99999999999999999985 5888887653

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.04  E-value=3.6e-06  Score=86.55  Aligned_cols=90  Identities=19%  Similarity=0.266  Sum_probs=74.8

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcc---cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQ---GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~---~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .-|...+.||-|+||+|..++. .+...+|.|.|++.+.-   .......|-.+|.+...++||+|+-.+.+.+.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            3466778999999999999984 44567899998754432   2334568889999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhc
Q 008332          540 EYMPNKSLDCYLFG  553 (570)
Q Consensus       540 e~~~~GsL~~~L~~  553 (570)
                      ||+++|++..+|-.
T Consensus       709 dYIPGGDmMSLLIr  722 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIR  722 (1034)
T ss_pred             eccCCccHHHHHHH
Confidence            99999999999874

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.02  E-value=1.6e-05  Score=73.87  Aligned_cols=82  Identities=18%  Similarity=0.287  Sum_probs=63.9

Q ss_pred             eeeccCCccEEEEEecCCcEEEEEEecCCCc-c-------cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTST-Q-------GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       471 ~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~-~-------~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +||+|+||.||++... +..+++|....... .       ....+.+|+.++..++|+++......+......+++|||+
T Consensus         1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            4799999999999854 78899998643211 1       1245778999999999887766555666677789999999


Q ss_pred             CCCCHHHHHhc
Q 008332          543 PNKSLDCYLFG  553 (570)
Q Consensus       543 ~~GsL~~~L~~  553 (570)
                      ++++|.+++..
T Consensus        80 ~g~~l~~~~~~   90 (199)
T TIGR03724        80 EGKPLKDVIEE   90 (199)
T ss_pred             CCccHHHHHhh
Confidence            99999998865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.00  E-value=1.6e-06  Score=80.02  Aligned_cols=85  Identities=22%  Similarity=0.339  Sum_probs=69.4

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc-ccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      +++.+..||.|.||.|++-. .+.|+.+|||+++.... .+.++++.|.++..+- +.||||+++|.+...+..||-||+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL  144 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL  144 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence            34455789999999999988 56699999999975544 4456789998865554 789999999999999999999999


Q ss_pred             CCCCCHHHH
Q 008332          542 MPNKSLDCY  550 (570)
Q Consensus       542 ~~~GsL~~~  550 (570)
                      |.- ||..+
T Consensus       145 Md~-SlDkl  152 (361)
T KOG1006|consen  145 MDI-SLDKL  152 (361)
T ss_pred             Hhh-hHHHH
Confidence            965 77655

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.00  E-value=2.3e-06  Score=94.29  Aligned_cols=80  Identities=28%  Similarity=0.405  Sum_probs=62.9

Q ss_pred             HHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +...+|...++||+|+||.||+++ .-+|+.+|||+++... ........+|+.++.+++|||||+.+..+.......-+
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~  555 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV  555 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence            445668888999999999999999 5569999999997432 33345688999999999999999999887765444433


Q ss_pred             Ee
Q 008332          539 YE  540 (570)
Q Consensus       539 ~e  540 (570)
                      +|
T Consensus       556 ~e  557 (1351)
T KOG1035|consen  556 LE  557 (1351)
T ss_pred             cc
Confidence            33

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.00  E-value=1.4e-07  Score=86.16  Aligned_cols=98  Identities=18%  Similarity=0.319  Sum_probs=74.0

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecC-C-CcccHHHHHHHHHHHHccCCCCccceeEEEEeC--------Ce
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK-T-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--------EE  534 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~-~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--------~~  534 (570)
                      +.....+|+|.||.||+++ .+.|+.||+|...- . ...-...-++|+.++..++|+|++.++.+|...        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            4445789999999999998 56678889886531 1 111223468999999999999999999988653        24


Q ss_pred             eEEEEecCCCCCHHHHHhcCCCCcccccHh
Q 008332          535 RMLIYEYMPNKSLDCYLFGLSHQKTYFGLE  564 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~  564 (570)
                      .++|+++|++ +|...|.+...+.....+.
T Consensus        99 ~ylVf~~ceh-DLaGlLsn~~vr~sls~Ik  127 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSNRKVRFSLSEIK  127 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcCccccccHHHHH
Confidence            7999999998 9999998765555544433

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.95  E-value=1e-05  Score=82.24  Aligned_cols=95  Identities=21%  Similarity=0.345  Sum_probs=80.6

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEec--CCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS--KTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~--~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ...|++.+.||+|+..+||++...+.+.+|+|++.  ..+.+....|..|+..|.+| .|.+|++|+.+....+.+||||
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            34477789999999999999998777888888764  45556678899999999999 5999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCCCc
Q 008332          540 EYMPNKSLDCYLFGLSHQK  558 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~  558 (570)
                      ||-+. +|...|.++....
T Consensus       440 E~Gd~-DL~kiL~k~~~~~  457 (677)
T KOG0596|consen  440 ECGDI-DLNKILKKKKSID  457 (677)
T ss_pred             ecccc-cHHHHHHhccCCC
Confidence            98765 9999999765443

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.94  E-value=1.3e-06  Score=80.66  Aligned_cols=86  Identities=28%  Similarity=0.415  Sum_probs=71.2

Q ss_pred             ceeeeccCCccEEEEEecCCcEEEEEEec--CCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          469 RNKLGEGGYGPVYKGVLPCGEVIAVKKLS--KTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~~~vavK~l~--~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      ...|.+...|+.|+|++. |..+++|++.  .......++|..|...++-+.||||+.++|.|..+..+.++..||+.||
T Consensus       195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            355777888999999987 5556677774  3333334679999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCC
Q 008332          547 LDCYLFGLS  555 (570)
Q Consensus       547 L~~~L~~~~  555 (570)
                      |...||+..
T Consensus       274 lynvlhe~t  282 (448)
T KOG0195|consen  274 LYNVLHEQT  282 (448)
T ss_pred             HHHHHhcCc
Confidence            999999743

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.92  E-value=4.4e-05  Score=70.35  Aligned_cols=80  Identities=16%  Similarity=0.187  Sum_probs=57.9

Q ss_pred             ceeeeccCCccEEEEEecCCcEEEEEEecCCCcc--c------------------------HHHHHHHHHHHHccCCCCc
Q 008332          469 RNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ--G------------------------FEEFKNEVMLTAKLQHVNL  522 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~--~------------------------~~~f~~e~~~l~~l~h~ni  522 (570)
                      ...||+|++|.||+|...+|+.||||.++.....  .                        ...+.+|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999768999999998643211  0                        1124578899999999987


Q ss_pred             cceeEEEEeCCeeEEEEecCCCCCHHHH
Q 008332          523 IRVLGFCIDSEERMLIYEYMPNKSLDCY  550 (570)
Q Consensus       523 v~l~g~~~~~~~~~lv~e~~~~GsL~~~  550 (570)
                      .........  ..+|||||++++++...
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~  107 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAP  107 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhh
Confidence            554433322  34899999998865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=97.87  E-value=2.5e-05  Score=79.74  Aligned_cols=91  Identities=22%  Similarity=0.297  Sum_probs=71.2

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc--c------cHHHHHHHHHHHHccC---CCCccceeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST--Q------GFEEFKNEVMLTAKLQ---HVNLIRVLGFCID  531 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~--~------~~~~f~~e~~~l~~l~---h~niv~l~g~~~~  531 (570)
                      .+|.....||+|+||+|+.|..+ +...|.||.+.+..-  .      .....-.|+.+|..++   |+||++++..+.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            34777899999999999999954 356799998853211  0      1112346999999996   9999999999999


Q ss_pred             CCeeEEEEecC-CCCCHHHHHhcC
Q 008332          532 SEERMLIYEYM-PNKSLDCYLFGL  554 (570)
Q Consensus       532 ~~~~~lv~e~~-~~GsL~~~L~~~  554 (570)
                      ++..+|+||-. ++-+|.+||.-+
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~k  664 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFK  664 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhcc
Confidence            99999999865 677999998743

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.86  E-value=5.5e-05  Score=81.57  Aligned_cols=85  Identities=20%  Similarity=0.239  Sum_probs=65.2

Q ss_pred             ccceeeeccCCccEEEEEecCCcEEEEEEe-cCC-Cc------ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKL-SKT-ST------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~~~~~~vavK~l-~~~-~~------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ...+.||+|+||.||++..... .+++|.. ... ..      ...+.+.+|+.++..++|++++.....+......++|
T Consensus       336 ~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv  414 (535)
T PRK09605        336 IPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV  414 (535)
T ss_pred             CccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence            4568999999999999987533 3444432 211 11      1124688999999999999999887777777788999


Q ss_pred             EecCCCCCHHHHHh
Q 008332          539 YEYMPNKSLDCYLF  552 (570)
Q Consensus       539 ~e~~~~GsL~~~L~  552 (570)
                      |||+++++|.+++.
T Consensus       415 ~E~~~g~~L~~~l~  428 (535)
T PRK09605        415 MEYIGGKDLKDVLE  428 (535)
T ss_pred             EEecCCCcHHHHHH
Confidence            99999999999885

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.84  E-value=5.6e-06  Score=82.04  Aligned_cols=92  Identities=22%  Similarity=0.305  Sum_probs=76.6

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      +.|..-++||+|+||.|+-|. ..+|+.+|.|++....   .......+.|-.++.+++.+.||.|--++.+.+.+++|+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            446677999999999999998 4568888999884322   233345778999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      ..|++|+|+-+|.+..
T Consensus       265 tlMNGGDLkfHiyn~g  280 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHG  280 (591)
T ss_pred             EeecCCceeEEeeccC
Confidence            9999999999988643

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.83  E-value=1.3e-05  Score=85.34  Aligned_cols=84  Identities=30%  Similarity=0.377  Sum_probs=70.7

Q ss_pred             cccceeeeccCCcc-EEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCC
Q 008332          466 FSIRNKLGEGGYGP-VYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       466 ~~~~~~lg~G~fg~-V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      |...+++|.|+-|. ||+|.+. |+.||||++-.   ....-..+|+..+..- .|||||+.++...+++..||..|.|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            45568899999988 7999998 89999999842   2334567999999888 79999999998888899999999996


Q ss_pred             CCCHHHHHhcC
Q 008332          544 NKSLDCYLFGL  554 (570)
Q Consensus       544 ~GsL~~~L~~~  554 (570)
                      - +|.+++...
T Consensus       587 ~-sL~dlie~~  596 (903)
T KOG1027|consen  587 C-SLQDLIESS  596 (903)
T ss_pred             h-hHHHHHhcc
Confidence            5 999999874

>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3

Probab=97.77  E-value=3.6e-05  Score=75.79  Aligned_cols=156  Identities=16%  Similarity=0.167  Sum_probs=89.1

Q ss_pred             HHHHHHhhCCCceEEEEEcCCCCCCccccccccc-ChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCC-CCccchhhhH
Q 008332           79 FADTVKKKNPSITTILSIGQGKDTNYSIYSSMVR-NSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS-TDMFNIGLLF  156 (570)
Q Consensus        79 ~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~-~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~-~~~~~~~~l~  156 (570)
                      .+++++++  ++||+=.|--..+.....+..++. +++....+|+.++++++.|||||.-|++|.+... .+..++..|+
T Consensus        47 widaAHrn--GV~vLGTiife~~~~~~~~~~ll~~~~~g~~~~A~kLi~ia~~yGFDGw~iN~E~~~~~~~~~~~l~~F~  124 (311)
T PF03644_consen   47 WIDAAHRN--GVKVLGTIIFEWGGGAEWCEELLEKDEDGSFPYADKLIEIAKYYGFDGWLINIETPLSGPEDAENLIDFL  124 (311)
T ss_dssp             HHHHHHHT--T--EEEEEEEEEE--HHHHHHHT---TTS--HHHHHHHHHHHHHT--EEEEEEEESSTTGGGHHHHHHHH
T ss_pred             hHHHHHhc--CceEEEEEEecCCchHHHHHHHHcCCcccccHHHHHHHHHHHHcCCCceEEEecccCCchhHHHHHHHHH
Confidence            45556555  799986665322223456778888 8888899999999999999999999999987554 5778999999


Q ss_pred             HHHHHHHhhhhhcccccccceEEEEeecccCCC---CCccCh--HHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCC
Q 008332          157 DEWRIAATKLDAKNSTRQQSLLILTARFRYSPP---ANSYLL--NSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSI  231 (570)
Q Consensus       157 ~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~  231 (570)
                      ++|++++++ ..      ...++---++.....   .....-  ....+.+|-+   .-+|.  |.              
T Consensus       125 ~~l~~~~~~-~~------~~~v~WYDs~t~~G~l~~qn~Ln~~N~~f~~~~d~i---FlNY~--W~--------------  178 (311)
T PF03644_consen  125 KYLRKEAHE-NP------GSEVIWYDSVTNSGRLSWQNELNDKNKPFFDVCDGI---FLNYN--WN--------------  178 (311)
T ss_dssp             HHHHHHHHH-T-------T-EEEEES-B-SSSSB---SSS-TTTGGGBES-SEE---EE-S----S--------------
T ss_pred             HHHHHHhhc-CC------CcEEEEeecCCcCCccchHHHHHhhCcchhhhccee---eEecC--CC--------------
Confidence            999998873 11      122222111111100   000000  0001222221   11111  11              


Q ss_pred             CCCCccCHHHHHHHHHHcCCCCCceeeeccccccc
Q 008332          232 SGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYA  266 (570)
Q Consensus       232 ~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~  266 (570)
                          ......+++...+.|.+|.+|-+||=..||.
T Consensus       179 ----~~~l~~s~~~A~~~~~~~~~vy~GiDv~grg  209 (311)
T PF03644_consen  179 ----PDSLESSVANAKSRGRDPYDVYAGIDVFGRG  209 (311)
T ss_dssp             ----HHHHHHHHHHHHHHTS-GGGEEEEEEHHHHT
T ss_pred             ----cccHHHHHHHHHHcCCCHHHEEEEEEEEcCC
Confidence                1256778888888999999999999999998

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of endo-beta-N-acetylglucosaminidases belong to the glycoside hydrolase family 85 (GH85 from CAZY). These enzymes work on a broad spectrum of substrates.; GO: 0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity, 0005737 cytoplasm; PDB: 2W92_A 2W91_A 2VTF_B 3FHQ_B 3FHA_D 3GDB_A.

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.76  E-value=1.3e-05  Score=76.36  Aligned_cols=95  Identities=14%  Similarity=0.198  Sum_probs=76.1

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC---CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  536 (570)
                      ...+|.+..+||+|++++|..++ .++.+.+|+|++++.   .....+..+.|-.+.... +||.+|.|..++.....++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            34568889999999999999998 466788999998632   223334456676677665 7999999999998889999


Q ss_pred             EEEecCCCCCHHHHHhcCCC
Q 008332          537 LIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~  556 (570)
                      .|.||+++|+|..++..+|+
T Consensus       328 fvieyv~ggdlmfhmqrqrk  347 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQRK  347 (593)
T ss_pred             EEEEEecCcceeeehhhhhc
Confidence            99999999999988876554

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.68  E-value=1.2e-05  Score=72.67  Aligned_cols=84  Identities=27%  Similarity=0.525  Sum_probs=70.2

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-CCCccceeEEEEeCC--eeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSE--ERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~--~~~lv~  539 (570)
                      +++++.+.+|+|.+++|+.|. ..+.+.+.||.+++-.   .+...+|+.++..+. ||||++|+.+..++.  ...||+
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF  114 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF  114 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence            557788899999999999998 6668889999996433   356789999999996 999999999988764  467999


Q ss_pred             ecCCCCCHHHH
Q 008332          540 EYMPNKSLDCY  550 (570)
Q Consensus       540 e~~~~GsL~~~  550 (570)
                      ||++|-+...+
T Consensus       115 E~v~n~Dfk~l  125 (338)
T KOG0668|consen  115 EYVNNTDFKQL  125 (338)
T ss_pred             hhhccccHHHH
Confidence            99998876654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.63  E-value=0.00015  Score=67.37  Aligned_cols=83  Identities=19%  Similarity=0.179  Sum_probs=60.6

Q ss_pred             CcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcc----------------------cHHHHHHHHHHHHccCCCC-
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ----------------------GFEEFKNEVMLTAKLQHVN-  521 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~----------------------~~~~f~~e~~~l~~l~h~n-  521 (570)
                      .+.+.+.||+|+||.||++...+|+.||||+++.....                      ....+.+|..++..+.|++ 
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            35667899999999999999777999999987532100                      0113667888888887774 


Q ss_pred             -ccceeEEEEeCCeeEEEEecCCCCCHHHHH
Q 008332          522 -LIRVLGFCIDSEERMLIYEYMPNKSLDCYL  551 (570)
Q Consensus       522 -iv~l~g~~~~~~~~~lv~e~~~~GsL~~~L  551 (570)
                       +.+.++    ....+++|||+++++|...+
T Consensus        96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          96 PVPKPID----WNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CCCceee----cCCceEEEEEeCCcchhhcc
Confidence             444433    34568999999999987764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.60  E-value=2.6e-05  Score=76.38  Aligned_cols=93  Identities=19%  Similarity=0.206  Sum_probs=70.6

Q ss_pred             HhcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc---ccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST---QGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  536 (570)
                      ...+|....+||+|+||+|..+..+ +.+.+|||+++....   ...+--+.|-++|.-. +-|.+++|..++...+.++
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy  426 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY  426 (683)
T ss_pred             eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence            3456778899999999999999854 456799999864321   1222234555666555 5789999999999899999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      .||||+.+|+|.-.+..-
T Consensus       427 FVMEyvnGGDLMyhiQQ~  444 (683)
T KOG0696|consen  427 FVMEYVNGGDLMYHIQQV  444 (683)
T ss_pred             eEEEEecCchhhhHHHHh
Confidence            999999999999888743

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.56  E-value=2.3e-05  Score=73.84  Aligned_cols=89  Identities=21%  Similarity=0.230  Sum_probs=68.9

Q ss_pred             eeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeC----CeeEEEEecCC
Q 008332          470 NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS----EERMLIYEYMP  543 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~----~~~~lv~e~~~  543 (570)
                      ++||-|-.|.|..|. ..+++..|+|+|.+.     ...++|+++.-.. .|||||+++.++...    .-+++|||+|+
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me  142 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME  142 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence            689999999999998 567889999998543     2356788876665 799999999887542    35789999999


Q ss_pred             CCCHHHHHhcCCCCcccccHhh
Q 008332          544 NKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       544 ~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      +|.|.+.+.+++  ...++..+
T Consensus       143 GGeLfsriq~~g--~~afTEre  162 (400)
T KOG0604|consen  143 GGELFSRIQDRG--DQAFTERE  162 (400)
T ss_pred             chHHHHHHHHcc--cccchHHH
Confidence            999999998754  33444443

>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function

Probab=97.54  E-value=0.00048  Score=68.21  Aligned_cols=127  Identities=14%  Similarity=0.131  Sum_probs=83.2

Q ss_pred             ChHHHHHHHHHHHHHHHHcCCCceeee-ccCCC-----------------------CCCC-------ccchhhhHHHHHH
Q 008332          113 NSSHRKSFIDSSIRIARLYGFRGLDFA-WTAPN-----------------------TSTD-------MFNIGLLFDEWRI  161 (570)
Q Consensus       113 ~~~~r~~fi~siv~~~~~~~~DGidiD-wE~p~-----------------------~~~~-------~~~~~~l~~~lr~  161 (570)
                      .|+.|+-.++-+.+++++|.+|||.|| .-||.                       ...|       +.+.+.|+++++.
T Consensus       135 ~PeVr~~i~~~v~Eiv~~YdvDGIhlDdy~yp~~~~g~~~~~~~~y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~  214 (311)
T PF02638_consen  135 HPEVRDYIIDIVKEIVKNYDVDGIHLDDYFYPPPSFGYDFPDVAAYEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYD  214 (311)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCeEEecccccccccCCCCCccHHHHHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999999999 44542                       1133       4578889999999


Q ss_pred             HHhhhhhcccccccceEEEEeecccCC--C--CCccChHHH--hhhhceeeeecccC-CCCCCCCCCCCCCCCCCCCCCC
Q 008332          162 AATKLDAKNSTRQQSLLILTARFRYSP--P--ANSYLLNSI--QRNLNWIHAVTASY-YEPVSTNFTAPPAALYGSISGR  234 (570)
Q Consensus       162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~l--~~~vD~i~vm~yd~-~~~~~~~~~~~~a~l~~~~~~~  234 (570)
                      ++++.        .+.+.+++++.+..  .  ...-|...-  ..++|++..|.|-. .+.       .           
T Consensus       215 ~ik~~--------kP~v~~sisp~g~~~~~y~~~~qD~~~W~~~G~iD~i~Pq~Y~~~~~~-------~-----------  268 (311)
T PF02638_consen  215 AIKAI--------KPWVKFSISPFGIWNSAYDDYYQDWRNWLKEGYIDYIVPQIYWSDFSH-------F-----------  268 (311)
T ss_pred             HHHHh--------CCCCeEEEEeecchhhhhhheeccHHHHHhcCCccEEEeeecccccch-------h-----------
Confidence            99864        33344444333221  1  112222222  47899999999943 110       0           


Q ss_pred             CccCHHHHHHHHHHcCCCC-Cceeeeccccccc
Q 008332          235 FARSTDQVLKAWIERGLSA-DKLVMCLPFYGYA  266 (570)
Q Consensus       235 ~~~~v~~~v~~~~~~gvp~-~KlvlGip~yG~~  266 (570)
                       ....+..+..|.+.-.+. -+|.+|+.+|-..
T Consensus       269 -~~~~~~~~~~w~~~~~~~~v~ly~G~~~y~~~  300 (311)
T PF02638_consen  269 -TAPYEQLAKWWAKQVKPTNVHLYIGLALYKVG  300 (311)
T ss_pred             -HHHHHHHHHHHHHhhcCCCceEEEccCcCCCC
Confidence             125667777777764443 4899999988543

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.45  E-value=0.00024  Score=76.77  Aligned_cols=89  Identities=22%  Similarity=0.292  Sum_probs=57.8

Q ss_pred             HhcCcccceeeeccCCccEEEEEec-C----CcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEE------EE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP-C----GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGF------CI  530 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~-~----~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~------~~  530 (570)
                      ..++|.+.+.||+|+||.||+|... +    +..||+|++.....  .+.+..|.  +....+.++..+...      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNER--VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHHH--HHhhchhhHHHHHHhhhcccccc
Confidence            3467888999999999999999954 4    67899998853322  11222221  111222222222111      23


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .....++|+||+++|+|.+++...
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSK  229 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhc
Confidence            456789999999999999999854

>PF13200 DUF4015: Putative glycosyl hydrolase domain

Probab=97.42  E-value=0.055  Score=53.16  Aligned_cols=90  Identities=12%  Similarity=0.050  Sum_probs=60.6

Q ss_pred             ChHHHHHHHHHHHHHHHHcCCCceeeecc-CCCC----------CCC----ccchhhhHHHHHHHHhhhhhcccccccce
Q 008332          113 NSSHRKSFIDSSIRIARLYGFRGLDFAWT-APNT----------STD----MFNIGLLFDEWRIAATKLDAKNSTRQQSL  177 (570)
Q Consensus       113 ~~~~r~~fi~siv~~~~~~~~DGidiDwE-~p~~----------~~~----~~~~~~l~~~lr~~l~~~~~~~~~~~~~~  177 (570)
                      +++.++-.+ .|..-+.+.|||.|.||.- ||..          ...    ...++.|++..|++|+.          ..
T Consensus       119 ~~evw~Y~i-~IA~Eaa~~GFdEIqfDYIRFP~~~~~~~l~y~~~~~~~~r~~aI~~Fl~~a~~~l~~----------~~  187 (316)
T PF13200_consen  119 SKEVWDYNI-DIAKEAAKLGFDEIQFDYIRFPDEGRLSGLDYSENDTEESRVDAITDFLAYAREELHP----------YG  187 (316)
T ss_pred             CHHHHHHHH-HHHHHHHHcCCCEEEeeeeecCCCCcccccccCCCCCcchHHHHHHHHHHHHHHHHhH----------cC
Confidence            344444444 4777777889999999985 7751          011    14578899999999973          33


Q ss_pred             EEEEeecccCC------CCCccChHHHhhhhceeeeecccCC
Q 008332          178 LILTARFRYSP------PANSYLLNSIQRNLNWIHAVTASYY  213 (570)
Q Consensus       178 ~~~~~~~~~~~------~~~~~~~~~l~~~vD~i~vm~yd~~  213 (570)
                      ..+++.+....      ..-+-++..+++++|+|..|-|--|
T Consensus       188 v~vSaDVfG~~~~~~~~~~iGQ~~~~~a~~vD~IsPMiYPSh  229 (316)
T PF13200_consen  188 VPVSADVFGYVAWSPDDMGIGQDFEKIAEYVDYISPMIYPSH  229 (316)
T ss_pred             CCEEEEecccccccCCCCCcCCCHHHHhhhCCEEEecccccc
Confidence            34444443321      1246779999999999999999543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.42  E-value=9.5e-05  Score=72.06  Aligned_cols=98  Identities=19%  Similarity=0.241  Sum_probs=73.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCC--C----CccceeEEEEeCCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH--V----NLIRVLGFCIDSEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h--~----niv~l~g~~~~~~~~  535 (570)
                      ..+|.+...+|+|.||+|..+.. ..+..||+|+++.-. .-.++.+-|++++.++.+  |    .+|++.+.+.-.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            56788889999999999999984 337889999985322 234566789999999832  2    245555556667899


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCcccccHh
Q 008332          536 MLIYEYMPNKSLDCYLFGLSHQKTYFGLE  564 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~~~~~~~~~  564 (570)
                      +||+|.+ +-|+.+||.+  ++..+++++
T Consensus       167 Civfell-G~S~~dFlk~--N~y~~fpi~  192 (415)
T KOG0671|consen  167 CIVFELL-GLSTFDFLKE--NNYIPFPID  192 (415)
T ss_pred             EEEEecc-ChhHHHHhcc--CCccccchH
Confidence            9999998 4499999987  345666766

>smart00090 RIO RIO-like kinase

Probab=97.40  E-value=0.00037  Score=66.45  Aligned_cols=83  Identities=16%  Similarity=0.152  Sum_probs=59.9

Q ss_pred             CcccceeeeccCCccEEEEE--ecCCcEEEEEEecCCCcc------------------------cHHHHHHHHHHHHccC
Q 008332          465 RFSIRNKLGEGGYGPVYKGV--LPCGEVIAVKKLSKTSTQ------------------------GFEEFKNEVMLTAKLQ  518 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~--~~~~~~vavK~l~~~~~~------------------------~~~~f~~e~~~l~~l~  518 (570)
                      .+.+.+.||+|+||.||+|.  ..+|+.||+|.++.....                        ....+.+|...+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            36778999999999999998  567999999998632210                        0123568999999997


Q ss_pred             CCC--ccceeEEEEeCCeeEEEEecCCCCCHHHHH
Q 008332          519 HVN--LIRVLGFCIDSEERMLIYEYMPNKSLDCYL  551 (570)
Q Consensus       519 h~n--iv~l~g~~~~~~~~~lv~e~~~~GsL~~~L  551 (570)
                      +..  +.++++.    ...++||||+++++|..++
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccc
Confidence            533  3333332    2358999999998887765

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.37  E-value=0.00019  Score=70.85  Aligned_cols=92  Identities=21%  Similarity=0.360  Sum_probs=76.4

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe-c---CCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL-P---CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~-~---~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~  534 (570)
                      ......+...+.||+|.|+.||++.. .   ..+.||+|.+.....  ......|+++|..+ .+.||+++.++....+.
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            33445577789999999999999994 3   467899999864432  34578999999999 69999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhc
Q 008332          535 RMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~  553 (570)
                      ..+|+||+++-+-.+++.+
T Consensus       110 v~ivlp~~~H~~f~~l~~~  128 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYRS  128 (418)
T ss_pred             eEEEecccCccCHHHHHhc
Confidence            9999999999999888875

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.35  E-value=0.00038  Score=70.04  Aligned_cols=99  Identities=15%  Similarity=0.214  Sum_probs=75.6

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-----C---CCccceeEEEEeC--
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-----H---VNLIRVLGFCIDS--  532 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-----h---~niv~l~g~~~~~--  532 (570)
                      .+|.+.+.||=|.|.+||.+. ....+.||+|+.+.+ .+-.+..+.|+.+|++++     |   ..||+|+..+.-.  
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            567888999999999999999 455778999998543 334456789999999873     2   3688999887643  


Q ss_pred             --CeeEEEEecCCCCCHHHHHhcCCCCcccccHh
Q 008332          533 --EERMLIYEYMPNKSLDCYLFGLSHQKTYFGLE  564 (570)
Q Consensus       533 --~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~  564 (570)
                        .+++||+|++ +-+|..+|....-+..+++.-
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~V  189 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCV  189 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHH
Confidence              4799999999 558999998665555554443

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.30  E-value=0.00051  Score=60.04  Aligned_cols=78  Identities=19%  Similarity=0.121  Sum_probs=63.6

Q ss_pred             ceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCC--CCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          469 RNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH--VNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h--~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .+.||+|.++.||++... +..+++|.......  ...+.+|+..+..++|  .++.++++....++..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            467999999999999976 47899998854332  4578899999999976  588888887777778999999999887


Q ss_pred             HHH
Q 008332          547 LDC  549 (570)
Q Consensus       547 L~~  549 (570)
                      +..
T Consensus        80 ~~~   82 (155)
T cd05120          80 LDE   82 (155)
T ss_pred             ccc
Confidence            764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.21  E-value=0.00028  Score=63.19  Aligned_cols=93  Identities=22%  Similarity=0.331  Sum_probs=74.0

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC-CcccHHHHHHHHHHHHc-cCCCCccceeEEEEeCCee
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAK-LQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~-l~h~niv~l~g~~~~~~~~  535 (570)
                      ++...+.+.-.+.||+|++|.|-+-+ ..+|+..|||+++.. ..+..+..++|+.+..+ ...|.+|+++|...+....
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            34455556666889999999998777 466999999999743 33455678889986655 5899999999999999999


Q ss_pred             EEEEecCCCCCHHHHHh
Q 008332          536 MLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~  552 (570)
                      +|-||.|.. ||..|-+
T Consensus       121 wIcME~M~t-Sldkfy~  136 (282)
T KOG0984|consen  121 WICMELMDT-SLDKFYR  136 (282)
T ss_pred             EEeHHHhhh-hHHHHHH
Confidence            999999976 8887755

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.16  E-value=0.0007  Score=62.13  Aligned_cols=94  Identities=21%  Similarity=0.383  Sum_probs=70.0

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCC-CCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH-VNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ..++.+.+.||.|+||.+|.|. ...|..||+|.=.....+  ..+..|..+..-++| ..|..+.........-.+|||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            3568889999999999999999 778999999975322222  246788888888865 556666656666677889999


Q ss_pred             cCCCCCHHHHHhcCCCCcc
Q 008332          541 YMPNKSLDCYLFGLSHQKT  559 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~  559 (570)
                      ++ +-||.++..-..+++.
T Consensus        92 LL-GPsLEdLfnfC~R~ft  109 (341)
T KOG1163|consen   92 LL-GPSLEDLFNFCSRRFT  109 (341)
T ss_pred             cc-CccHHHHHHHHhhhhh
Confidence            88 6699988764434443

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.15  E-value=0.00048  Score=71.90  Aligned_cols=84  Identities=20%  Similarity=0.203  Sum_probs=57.5

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCCcccH----------------------------------------HHHHH
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF----------------------------------------EEFKN  509 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~----------------------------------------~~f~~  509 (570)
                      +.||.|++|+||+|++.+|+.||||+.++......                                        -+|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            67999999999999999999999999864321100                                        02455


Q ss_pred             HHHHHHcc----CCCCccceeEEEEe-CCeeEEEEecCCCCCHHHHHhc
Q 008332          510 EVMLTAKL----QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       510 e~~~l~~l----~h~niv~l~g~~~~-~~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      |+..+.++    +|.+-+.+-.++.. ....+|||||+++++|.+++..
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~  251 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL  251 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH
Confidence            66555554    33333443334432 3457899999999999988763

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.13  E-value=0.00025  Score=66.11  Aligned_cols=88  Identities=19%  Similarity=0.350  Sum_probs=67.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEE-EEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGF-CIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~-~~~~~~~~lv~e  540 (570)
                      +.|.+.+.||+|.||.+..++- ...+.+++|.++.. .....+|.+|..---.| .|.||+.-+.+ +...+....++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            4467778999999999999984 44667899988532 23457899998655556 58999987755 445567789999


Q ss_pred             cCCCCCHHHHHh
Q 008332          541 YMPNKSLDCYLF  552 (570)
Q Consensus       541 ~~~~GsL~~~L~  552 (570)
                      |+|.|+|.+-+.
T Consensus       103 ~aP~gdL~snv~  114 (378)
T KOG1345|consen  103 FAPRGDLRSNVE  114 (378)
T ss_pred             cCccchhhhhcC
Confidence            999999988665

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.05  E-value=0.0034  Score=62.11  Aligned_cols=90  Identities=13%  Similarity=0.150  Sum_probs=58.8

Q ss_pred             hcCcccceeeeccCCccEEEEEecC----CcEEEEEEecCCCccc-H----------HHHHHHHHHHHccCCCCccceeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTSTQG-F----------EEFKNEVMLTAKLQHVNLIRVLG  527 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~~~~~-~----------~~f~~e~~~l~~l~h~niv~l~g  527 (570)
                      ..+|++.+.||+|+||.||+|....    +..+++|......... .          .....+...+..+.|+|++++.+
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            3568889999999999999999543    3456666543221111 0          11223344556779999999999


Q ss_pred             EEEeCC----eeEEEEecCCCCCHHHHHhc
Q 008332          528 FCIDSE----ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       528 ~~~~~~----~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ++....    ..++++|++.. ++.+.+..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  119 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR  119 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHh
Confidence            776553    34678887744 67666653

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.01  E-value=4e-05  Score=71.09  Aligned_cols=87  Identities=18%  Similarity=0.345  Sum_probs=68.5

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecC--CCcccHHHHHHHHHHHHccCCCCccceeEEEEeC-----CeeEE
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-----EERML  537 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~--~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-----~~~~l  537 (570)
                      ++..+.||-|+||.||..+ .++|+.|+.|++..  ......+.+.+|+.++.-++|.|++.++.....+     +++|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            4445889999999999998 56799999999853  2334457788999999999999999998877654     35788


Q ss_pred             EEecCCCCCHHHHHhc
Q 008332          538 IYEYMPNKSLDCYLFG  553 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~  553 (570)
                      ++|+|.. +|+..|-.
T Consensus       135 ~TELmQS-DLHKIIVS  149 (449)
T KOG0664|consen  135 LTELMQS-DLHKIIVS  149 (449)
T ss_pred             HHHHHHh-hhhheecc
Confidence            8898854 77766654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.93  E-value=0.0035  Score=57.74  Aligned_cols=79  Identities=14%  Similarity=0.125  Sum_probs=59.4

Q ss_pred             cceeeeccCCccEEEEEecCCcEEEEEEecCCCcc----cHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeEEEEecC
Q 008332          468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ----GFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       468 ~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~----~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ....|++|+||+|+...- .+..++.+.+......    ....|.+|+.+|.++. |+++.++++.    ...+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            347899999999996665 4777887777533221    1225789999999995 5888888875    4469999999


Q ss_pred             CCCCHHHHH
Q 008332          543 PNKSLDCYL  551 (570)
Q Consensus       543 ~~GsL~~~L  551 (570)
                      ++.+|.+.+
T Consensus        81 ~G~~L~~~~   89 (218)
T PRK12274         81 AGAAMYQRP   89 (218)
T ss_pred             cCccHHhhh
Confidence            999997654

>PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function

Probab=96.88  E-value=0.01  Score=52.41  Aligned_cols=85  Identities=11%  Similarity=0.096  Sum_probs=60.9

Q ss_pred             ChHHHHHHHHHHHHHHHH-cCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCCC
Q 008332          113 NSSHRKSFIDSSIRIARL-YGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN  191 (570)
Q Consensus       113 ~~~~r~~fi~siv~~~~~-~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (570)
                      +++..++..+.+.++-.. +...||.||+..+.  .....|..|++.||..|..         ...+++++-........
T Consensus        22 ~~~~~~~i~~~l~~W~~~G~~v~giQIDfDa~t--~~L~~Y~~fL~~LR~~LP~---------~~~LSIT~L~dW~~~~~   90 (181)
T PF11340_consen   22 PEQVLARILQLLQRWQAAGNNVAGIQIDFDAAT--SRLPAYAQFLQQLRQRLPP---------DYRLSITALPDWLSSPD   90 (181)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCceEEEEecCccc--cchHHHHHHHHHHHHhCCC---------CceEeeEEehhhhcCch
Confidence            345555555555566543 36899999999763  4567899999999999963         45566666554433222


Q ss_pred             ccChHHHhhhhceeeeecc
Q 008332          192 SYLLNSIQRNLNWIHAVTA  210 (570)
Q Consensus       192 ~~~~~~l~~~vD~i~vm~y  210 (570)
                        .++.+...+|-+.+|+|
T Consensus        91 --~L~~L~~~VDE~VlQ~y  107 (181)
T PF11340_consen   91 --WLNALPGVVDELVLQVY  107 (181)
T ss_pred             --hhhhHhhcCCeeEEEee
Confidence              47889999999999999

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.73  E-value=0.0047  Score=62.05  Aligned_cols=89  Identities=21%  Similarity=0.272  Sum_probs=65.3

Q ss_pred             CcccceeeeccCCccEEEEEecCC--cEEEEEEecCCCcccHHHHHHHHHHHHccCC----CCccceeEEE-EeCCeeEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPCG--EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH----VNLIRVLGFC-IDSEERML  537 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~~--~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h----~niv~l~g~~-~~~~~~~l  537 (570)
                      ++.+.+.||+|+||.||.+.....  ..+|+|.-..........+..|..++..+.+    +++..++... ......+|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            688899999999999999995432  4788887654322222256778888888863    5777777776 35667899


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||+.+ +-+|.++....
T Consensus        99 VM~l~-G~sL~dl~~~~  114 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRN  114 (322)
T ss_pred             EEecc-CccHHHHHHhC
Confidence            99988 66999977543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.73  E-value=0.012  Score=58.47  Aligned_cols=87  Identities=32%  Similarity=0.528  Sum_probs=72.2

Q ss_pred             cccceeeeccCCccEEEEEecCCcEEEEEEecCCCcc---cHHHHHHHHHHHHccCCC-CccceeEEEEeCCeeEEEEec
Q 008332          466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ---GFEEFKNEVMLTAKLQHV-NLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~---~~~~f~~e~~~l~~l~h~-niv~l~g~~~~~~~~~lv~e~  541 (570)
                      |...+.||.|.||.||++...  ..+++|.+......   ....|.+|+.++..+.|+ +++++..........++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            455688999999999999966  78899998643322   356899999999999888 799999999767778999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +.+++|.+++...
T Consensus        80 ~~~~~l~~~~~~~   92 (384)
T COG0515          80 VDGGSLEDLLKKI   92 (384)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999887754

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=96.69  E-value=0.00088  Score=62.61  Aligned_cols=86  Identities=21%  Similarity=0.363  Sum_probs=67.8

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ++....||.|..|.|+++.. ..|..+|||.++... ..+.+..+..++++..- ..|.||+.+|++......++-||.|
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM  173 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM  173 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence            34456799999999999994 568899999997544 34456788888887776 4899999999999999999999998


Q ss_pred             CCCCHHHHHh
Q 008332          543 PNKSLDCYLF  552 (570)
Q Consensus       543 ~~GsL~~~L~  552 (570)
                      .. .+..+|+
T Consensus       174 s~-C~ekLlk  182 (391)
T KOG0983|consen  174 ST-CAEKLLK  182 (391)
T ss_pred             HH-HHHHHHH
Confidence            54 3444444

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.64  E-value=0.0046  Score=56.56  Aligned_cols=74  Identities=19%  Similarity=0.303  Sum_probs=48.1

Q ss_pred             ceeeeccCCccEEEEEecCCcEEEEEEecCCCcc--cHHHH----------------------HHHHHHHHccCCCC--c
Q 008332          469 RNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ--GFEEF----------------------KNEVMLTAKLQHVN--L  522 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~--~~~~f----------------------~~e~~~l~~l~h~n--i  522 (570)
                      .+.||+|+||.||++...+++.||||+++.....  ....+                      ..|...+.++.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999777999999988643211  11111                      24555555554332  3


Q ss_pred             cceeEEEEeCCeeEEEEecCCCCC
Q 008332          523 IRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       523 v~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .+.++.    ...++||||+++|.
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~  101 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDG  101 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCC
Confidence            333332    34689999999954

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.62  E-value=0.0031  Score=60.74  Aligned_cols=92  Identities=20%  Similarity=0.296  Sum_probs=64.8

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      -+|.+++.||+|+||.++.|. +-++++||||.=+..+  ..-++..|-+..+.| ..+.|.+.+-.-..+-.-.||+|+
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            357888999999999999999 5569999999643221  122455666666666 467887776554455567899998


Q ss_pred             CCCCCHHHHHhcCCCCc
Q 008332          542 MPNKSLDCYLFGLSHQK  558 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~  558 (570)
                      + +-||.++..=..+.+
T Consensus       106 L-GPSLEDLFD~CgR~F  121 (449)
T KOG1165|consen  106 L-GPSLEDLFDLCGRRF  121 (449)
T ss_pred             h-CcCHHHHHHHhcCcc
Confidence            8 568988865333333

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.59  E-value=0.0056  Score=65.06  Aligned_cols=85  Identities=19%  Similarity=0.214  Sum_probs=57.1

Q ss_pred             CcccceeeeccCCccEEEEEecC-CcEEEEEEecCCCcc---------------------------------c-HH----
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQ---------------------------------G-FE----  505 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~l~~~~~~---------------------------------~-~~----  505 (570)
                      .|.. +.||+|++|+||++++++ |+.||||++++.-..                                 + .+    
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            3554 689999999999999877 999999999643110                                 0 01    


Q ss_pred             --HHHHHHHHHHcc----CCCCccceeEEEEe-CCeeEEEEecCCCCCHHHH
Q 008332          506 --EFKNEVMLTAKL----QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCY  550 (570)
Q Consensus       506 --~f~~e~~~l~~l----~h~niv~l~g~~~~-~~~~~lv~e~~~~GsL~~~  550 (570)
                        +|.+|+.-+.++    .+.+.+.+-.+.++ .....|||||++++.|.++
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV  251 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence              244555444444    24444444444443 3567899999999999875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.54  E-value=0.0015  Score=68.15  Aligned_cols=88  Identities=23%  Similarity=0.341  Sum_probs=70.0

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecC
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+.+...+|.|+|+.|-.|. ...++..+||++.....    +-.+|+.++... +|||++++.+++....+.++|||.+
T Consensus       323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l  398 (612)
T KOG0603|consen  323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL  398 (612)
T ss_pred             hhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence            34555679999999999888 55678899999964422    223566666555 7999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC
Q 008332          543 PNKSLDCYLFGLSH  556 (570)
Q Consensus       543 ~~GsL~~~L~~~~~  556 (570)
                      .+|-|.+.++..+.
T Consensus       399 ~g~ell~ri~~~~~  412 (612)
T KOG0603|consen  399 DGGELLRRIRSKPE  412 (612)
T ss_pred             cccHHHHHHHhcch
Confidence            99999998886543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.29  E-value=0.0028  Score=70.76  Aligned_cols=93  Identities=23%  Similarity=0.370  Sum_probs=66.6

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC---CCCccceeEEEEeCCee
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ---HVNLIRVLGFCIDSEER  535 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~---h~niv~l~g~~~~~~~~  535 (570)
                      .+.....|.+...+|+|++|+||+|.-.+|+.||+|.-++....+   |--=..++.+|+   -+.|.++..+....+..
T Consensus       693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S  769 (974)
T KOG1166|consen  693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNAS  769 (974)
T ss_pred             eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence            345556788889999999999999997779999999987665543   111122333333   23344444445566778


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      +||+||.+-|+|.+++...
T Consensus       770 ~lv~ey~~~Gtlld~~N~~  788 (974)
T KOG1166|consen  770 VLVSEYSPYGTLLDLINTN  788 (974)
T ss_pred             eeeeeccccccHHHhhccC
Confidence            9999999999999999843

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.07  E-value=0.032  Score=53.23  Aligned_cols=83  Identities=17%  Similarity=0.169  Sum_probs=60.3

Q ss_pred             eeee-ccCCccEEEEEecCCcEEEEEEecCCC-------------cccHHHHHHHHHHHHccCCCCc--cceeEEEEeCC
Q 008332          470 NKLG-EGGYGPVYKGVLPCGEVIAVKKLSKTS-------------TQGFEEFKNEVMLTAKLQHVNL--IRVLGFCIDSE  533 (570)
Q Consensus       470 ~~lg-~G~fg~V~~~~~~~~~~vavK~l~~~~-------------~~~~~~f~~e~~~l~~l~h~ni--v~l~g~~~~~~  533 (570)
                      ..|| .|+.|.||..... +..+++|......             ......+.+|+.++.+++|+++  +..++......
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            6787 8889999998876 7788888774211             1123467899999999988875  66666644332


Q ss_pred             ----eeEEEEecCCC-CCHHHHHhc
Q 008332          534 ----ERMLIYEYMPN-KSLDCYLFG  553 (570)
Q Consensus       534 ----~~~lv~e~~~~-GsL~~~L~~  553 (570)
                          ..++|+|++++ ++|.+++.+
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~  140 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE  140 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc
Confidence                23599999997 699999865

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=95.74  E-value=0.00098  Score=67.49  Aligned_cols=92  Identities=20%  Similarity=0.154  Sum_probs=73.2

Q ss_pred             cCcccceeeeccCCccEEEEEecCCc-EEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~-~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+++....||-|+||.|=....+... ..|.|++++..-   ...+....|-.+|.+.+.|.||+|+--+.+...+|++|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            34555678999999999988866433 378888864322   22234668899999999999999999888889999999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      |-|-+|.|...|+++.
T Consensus       500 EaClGGElWTiLrdRg  515 (732)
T KOG0614|consen  500 EACLGGELWTILRDRG  515 (732)
T ss_pred             HhhcCchhhhhhhhcC
Confidence            9999999999999754

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=95.72  E-value=0.0083  Score=61.18  Aligned_cols=94  Identities=17%  Similarity=0.270  Sum_probs=72.1

Q ss_pred             HHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC------CCCccceeEEEEeC
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ------HVNLIRVLGFCIDS  532 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~------h~niv~l~g~~~~~  532 (570)
                      +..-.+|.+.-..|+|-|+.|.+|. ...|+.||||+++..... .+.=++|+++|.+|+      --++++|+..+...
T Consensus       428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk  506 (752)
T KOG0670|consen  428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK  506 (752)
T ss_pred             hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence            3344556667778999999999999 455889999999643321 233468999999984      34778888888888


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++++||+|-+.. +|.+.|.+..
T Consensus       507 nHLClVFE~Lsl-NLRevLKKyG  528 (752)
T KOG0670|consen  507 NHLCLVFEPLSL-NLREVLKKYG  528 (752)
T ss_pred             ceeEEEehhhhc-hHHHHHHHhC
Confidence            999999998865 8999998644

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.49  E-value=0.02  Score=53.77  Aligned_cols=82  Identities=17%  Similarity=0.238  Sum_probs=61.1

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCC--CCccceeEEEEeCC---eeEEEEecCC
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQH--VNLIRVLGFCIDSE---ERMLIYEYMP  543 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h--~niv~l~g~~~~~~---~~~lv~e~~~  543 (570)
                      +.|+.|..+.+|+....+|..+++|....... .....+.+|..++..+.+  .++.+++..+....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            56899999999999977668899998753322 134568899999999865  34566776665432   5689999999


Q ss_pred             CCCHHHHH
Q 008332          544 NKSLDCYL  551 (570)
Q Consensus       544 ~GsL~~~L  551 (570)
                      +++|.+.+
T Consensus        84 G~~l~~~~   91 (223)
T cd05154          84 GRVLRDRL   91 (223)
T ss_pred             CEecCCCC
Confidence            98887654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=94.86  E-value=0.033  Score=35.75  Aligned_cols=26  Identities=8%  Similarity=0.285  Sum_probs=12.1

Q ss_pred             eEEEeehhhHHHHHHHHHhhhhhhhh
Q 008332          391 LSIALISTAAAALTLLLGCCAYKYNQ  416 (570)
Q Consensus       391 ~~i~~~~~~~~~~~~~~~~~~~~~~~  416 (570)
                      +.+.+++.+++++++++++++++|||
T Consensus        13 Ia~~VvVPV~vI~~vl~~~l~~~~rR   38 (40)
T PF08693_consen   13 IAVGVVVPVGVIIIVLGAFLFFWYRR   38 (40)
T ss_pred             EEEEEEechHHHHHHHHHHhheEEec
Confidence            33444444444444444444444544

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only]

Probab=94.81  E-value=0.078  Score=52.61  Aligned_cols=78  Identities=9%  Similarity=0.122  Sum_probs=64.2

Q ss_pred             CCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhh
Q 008332           88 PSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATK  165 (570)
Q Consensus        88 ~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~  165 (570)
                      +|++++=..=-.+.++.+....++++.++-+.-++.++++.+-.||||==|+.|.-.+...-.|+..|++.|.++++.
T Consensus       123 HGV~vlGTFItEw~eg~~~c~~~La~~es~~~~~e~L~~l~~~fgFdGWLiNiEn~i~~~~i~~l~~F~~~Lt~~~~~  200 (526)
T KOG2331|consen  123 HGVKVLGTFITEWDEGKATCKEFLATEESVEMTVERLVELARFFGFDGWLINIENKIDLAKIPNLIQFVSHLTKVLHS  200 (526)
T ss_pred             cCceeeeeEEEEeccchhHHHHHHccchhHHHHHHHHHHHHHHhCCceEEEEeeeccChhhCccHHHHHHHHHHHHhh
Confidence            378888554333344777788999999999999999999999999999999999765555667899999999998884

>cd05151 ChoK Choline Kinase (ChoK)

Probab=94.70  E-value=0.08  Score=47.30  Aligned_cols=76  Identities=17%  Similarity=0.168  Sum_probs=54.2

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCcc-ceeEEEEeCCeeEEEEecCCCCCHH
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI-RVLGFCIDSEERMLIYEYMPNKSLD  548 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv-~l~g~~~~~~~~~lv~e~~~~GsL~  548 (570)
                      +.++.|.++.||+.... +..+++|....... ....+..|+.++..+.+.+++ +++..  .....++||||+++.++.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCccc
Confidence            56789999999999865 77899998754321 123467888888888655554 44433  334468999999998876


Q ss_pred             H
Q 008332          549 C  549 (570)
Q Consensus       549 ~  549 (570)
                      +
T Consensus        80 ~   80 (170)
T cd05151          80 T   80 (170)
T ss_pred             c
Confidence            4

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=94.56  E-value=0.071  Score=47.34  Aligned_cols=80  Identities=18%  Similarity=0.232  Sum_probs=58.4

Q ss_pred             ccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .....|++|.++.||.|.+. |..+|+|.-+..  ..+..+..|++++..+...++.+=+   ..-+...+.|||..+-.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~v---y~yg~~~i~me~i~G~~   98 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEV---YFYGEDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhhcccccEEEEeecc-CceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceE---EEechhhhhhhhhcCcc
Confidence            34478999999999999987 668999986533  3346788999999888766665422   12234456699998888


Q ss_pred             HHHHHh
Q 008332          547 LDCYLF  552 (570)
Q Consensus       547 L~~~L~  552 (570)
                      |.+.-.
T Consensus        99 L~~~~~  104 (201)
T COG2112          99 LGKLEI  104 (201)
T ss_pred             hhhhhh
Confidence            887654

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=93.83  E-value=0.022  Score=54.73  Aligned_cols=86  Identities=23%  Similarity=0.291  Sum_probs=61.4

Q ss_pred             cccceeeeccCCccEEEEE-ecCCcEEEEEEecC--CCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC------eeE
Q 008332          466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------ERM  536 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~--~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------~~~  536 (570)
                      +.....+|.|.- .|..+- .-.+++|++|.+..  ......+...+|..+|..++|+|+++++.++....      +.+
T Consensus        19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y   97 (369)
T KOG0665|consen   19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY   97 (369)
T ss_pred             eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence            444456666654 343333 22378899998742  22334456789999999999999999999887653      579


Q ss_pred             EEEecCCCCCHHHHHhc
Q 008332          537 LIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~  553 (570)
                      +|||+|.. +|.+.++.
T Consensus        98 ~v~e~m~~-nl~~vi~~  113 (369)
T KOG0665|consen   98 LVMELMDA-NLCQVILM  113 (369)
T ss_pred             HHHHhhhh-HHHHHHHH
Confidence            99999965 89998873

>PF15102 TMEM154: TMEM154 protein family

Probab=90.96  E-value=0.51  Score=40.10  Aligned_cols=19  Identities=26%  Similarity=0.363  Sum_probs=7.3

Q ss_pred             hHHHHHHHHHhh-hhhhhhh
Q 008332          399 AAAALTLLLGCC-AYKYNQM  417 (570)
Q Consensus       399 ~~~~~~~~~~~~-~~~~~~~  417 (570)
                      +++++++++++| ++++||+
T Consensus        66 VLLvlLLl~vV~lv~~~kRk   85 (146)
T PF15102_consen   66 VLLVLLLLSVVCLVIYYKRK   85 (146)
T ss_pred             HHHHHHHHHHHHheeEEeec
Confidence            333333333333 3334333

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=90.66  E-value=0.12  Score=43.27  Aligned_cols=31  Identities=26%  Similarity=0.233  Sum_probs=27.6

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS  500 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~  500 (570)
                      +.|+.|+.|+||+|++++|+.||||..++.-
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~i   47 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPGI   47 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchHH
Confidence            6799999999999999889999999986543

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=88.85  E-value=0.29  Score=41.88  Aligned_cols=20  Identities=10%  Similarity=0.182  Sum_probs=9.4

Q ss_pred             ceEEEeehhhHHHHHHHHHh
Q 008332          390 RLSIALISTAAAALTLLLGC  409 (570)
Q Consensus       390 ~~~i~~~~~~~~~~~~~~~~  409 (570)
                      .++|.+++++.+.+++++++
T Consensus        49 nIVIGvVVGVGg~ill~il~   68 (154)
T PF04478_consen   49 NIVIGVVVGVGGPILLGILA   68 (154)
T ss_pred             cEEEEEEecccHHHHHHHHH
Confidence            45665555544444433333

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=88.10  E-value=0.66  Score=49.26  Aligned_cols=83  Identities=16%  Similarity=0.245  Sum_probs=57.7

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEecCCCcc--------------------------c----HH----------HHHH
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ--------------------------G----FE----------EFKN  509 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~--------------------------~----~~----------~f~~  509 (570)
                      +.|+.++.|+||+|++++|+.||||+.++.-..                          .    .+          ++.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            678899999999999999999999997543111                          0    01          2445


Q ss_pred             HHHHHHcc----CCCCccceeEEEEe-CCeeEEEEecCCCCCHHHHHh
Q 008332          510 EVMLTAKL----QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       510 e~~~l~~l----~h~niv~l~g~~~~-~~~~~lv~e~~~~GsL~~~L~  552 (570)
                      |+.-+.++    ++..-+.+-.++++ .....|+|||++|-.+.+...
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~  258 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAA  258 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHH
Confidence            66555543    34444455556654 467889999999999988843

>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13

Probab=87.78  E-value=17  Score=35.07  Aligned_cols=200  Identities=12%  Similarity=0.104  Sum_probs=108.0

Q ss_pred             CcceEEE-EeEEEeCCceE--EeeCCC---ccHHHHHHHHHHHHhhCCCceEEEEEc--CCCCCCc-------------c
Q 008332           47 LFTHLIC-SSADINSTTYQ--LSLSLP---SDENQIAKFADTVKKKNPSITTILSIG--QGKDTNY-------------S  105 (570)
Q Consensus        47 ~~Thii~-~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~lk~~~~~~kvllsig--g~~~~~~-------------~  105 (570)
                      ..++|.+ +|+..+.+|..  +-|...   ...+.+.+.+.+++.+. ++||...+.  ++.-...             .
T Consensus        30 ~~~tV~Lqaf~d~~gdg~~~~~YFpnr~lpvraDlf~rvawql~tr~-~v~VyAWMPvlaf~lp~~~~~~~~~~~~~~~~  108 (294)
T PF14883_consen   30 GINTVYLQAFADPDGDGNADAVYFPNRHLPVRADLFNRVAWQLRTRA-GVKVYAWMPVLAFDLPKVKRADEVRTDRPDPD  108 (294)
T ss_pred             CCCEEEEEeeeCCCCCCceeeEEcCCCCCchHHHHHHHHHHHHhhhh-CCEEEEeeehhhccCCCcchhhhccccCCCCC
Confidence            4667765 77766666522  222222   23455667666777665 688875554  1111000             0


Q ss_pred             ccccccc-ChHHHHHHHHHHHHHHHHc-CCCceee-------eccCCCCCCC------ccchhhhHHHHHHHHhhhhhcc
Q 008332          106 IYSSMVR-NSSHRKSFIDSSIRIARLY-GFRGLDF-------AWTAPNTSTD------MFNIGLLFDEWRIAATKLDAKN  170 (570)
Q Consensus       106 ~f~~~~~-~~~~r~~fi~siv~~~~~~-~~DGidi-------DwE~p~~~~~------~~~~~~l~~~lr~~l~~~~~~~  170 (570)
                      .+..+-- +++.| +.|.+|-+=|..| .||||=|       |+|.|....+      ...+..|..+|++..+.....-
T Consensus       109 ~y~RLSPf~p~~r-~~I~~IYeDLA~y~~fdGILFhDDa~L~D~E~~~~~~~~~~~~Kt~~Li~ft~eL~~~v~~~rp~l  187 (294)
T PF14883_consen  109 GYRRLSPFDPEAR-QIIKEIYEDLARYSKFDGILFHDDAVLSDFEIAAIRQNPADRQKTRALIDFTMELAAAVRRYRPDL  187 (294)
T ss_pred             CceecCCCCHHHH-HHHHHHHHHHHhhCCCCeEEEcCCccccchhhhhhccChhhHHHHHHHHHHHHHHHHHHHHhCccc
Confidence            1111111 45555 5677777777777 8999988       4443321111      1246778888888877541100


Q ss_pred             cccccceEEEEeecccC-CCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHc
Q 008332          171 STRQQSLLILTARFRYS-PPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIER  249 (570)
Q Consensus       171 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~  249 (570)
                      ..  ..++.-.+...+. ..--.-++....+..||..+|+.-|...-.       .|         ..+...-++...+.
T Consensus       188 kT--ARNiya~pvl~P~se~WfAQnl~~fl~~YD~taimAMPymE~~~-------~~---------~~WL~~Lv~~v~~~  249 (294)
T PF14883_consen  188 KT--ARNIYAEPVLNPESEAWFAQNLDDFLKAYDYTAIMAMPYMEQAE-------DP---------EQWLAQLVDAVAAR  249 (294)
T ss_pred             hh--hhcccccccCCcchhhHHHHhHHHHHHhCCeeheeccchhcccc-------CH---------HHHHHHHHHHHHhc
Confidence            00  1111111111111 000223466677788999998876643211       11         34777777777777


Q ss_pred             CCCCCceeeecccccccee
Q 008332          250 GLSADKLVMCLPFYGYAWT  268 (570)
Q Consensus       250 gvp~~KlvlGip~yG~~~~  268 (570)
                      ..+.+|+|+-+.  .+.|+
T Consensus       250 p~~l~KtvFELQ--a~dwr  266 (294)
T PF14883_consen  250 PGGLDKTVFELQ--AVDWR  266 (294)
T ss_pred             CCcccceEEEEe--ccCCc
Confidence            677899999987  56664

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=85.53  E-value=0.95  Score=48.43  Aligned_cols=69  Identities=20%  Similarity=0.174  Sum_probs=51.9

Q ss_pred             ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          485 LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       485 ~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ..++.+|.|...+.......+...+-+..|+.++||||++++.........|||+|-+.  -|..+|.+..
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~  102 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG  102 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH
Confidence            45688899988865444333445677788999999999999998888889999999874  3666665433

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=85.19  E-value=0.38  Score=39.94  Aligned_cols=28  Identities=14%  Similarity=0.224  Sum_probs=11.9

Q ss_pred             EEEeehhhHHHHHHHHHhhhhhhhhhhh
Q 008332          392 SIALISTAAAALTLLLGCCAYKYNQMKR  419 (570)
Q Consensus       392 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (570)
                      ++.|++++++++++++++++|+.||+++
T Consensus        66 i~~Ii~gv~aGvIg~Illi~y~irR~~K   93 (122)
T PF01102_consen   66 IIGIIFGVMAGVIGIILLISYCIRRLRK   93 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             eeehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3334444444444444444444444333

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=84.09  E-value=1.4  Score=45.90  Aligned_cols=74  Identities=22%  Similarity=0.248  Sum_probs=52.5

Q ss_pred             ccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC----CeeEEEEecCCC-CCHHHHH
Q 008332          478 GPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS----EERMLIYEYMPN-KSLDCYL  551 (570)
Q Consensus       478 g~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~----~~~~lv~e~~~~-GsL~~~L  551 (570)
                      .+.|++. -.+|..++.|+++....+....-..-++.++++.|+|+|+|..++...    ..+.+||+|.|+ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            4578887 456889999999533333222333456778999999999999988743    468899999875 5676653

>PRK10593 hypothetical protein; Provisional

Probab=83.11  E-value=4.3  Score=40.13  Aligned_cols=80  Identities=15%  Similarity=0.093  Sum_probs=57.0

Q ss_pred             cccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCC---CCccceeEEEEeC---CeeEEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH---VNLIRVLGFCIDS---EERMLIY  539 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h---~niv~l~g~~~~~---~~~~lv~  539 (570)
                      +...+.||.|..+.||+-...++ .+.+|..+..  .....|..|...+..+..   -.+.++++.|...   +..+|||
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            33447899999999999876545 4566664321  123578899999988843   3677888877543   5689999


Q ss_pred             ecCCCCCHH
Q 008332          540 EYMPNKSLD  548 (570)
Q Consensus       540 e~~~~GsL~  548 (570)
                      |+++++++.
T Consensus        93 E~i~G~~~~  101 (297)
T PRK10593         93 ERLRGVSVE  101 (297)
T ss_pred             eccCCEecC
Confidence            999988764

>PRK12568 glycogen branching enzyme; Provisional

Probab=82.14  E-value=18  Score=40.21  Aligned_cols=92  Identities=14%  Similarity=0.179  Sum_probs=60.6

Q ss_pred             cHHHHHHHHHHHHhhCCCceEEEEEcCC----C-----CC-Cc-------------ccccc---cccChHHHHHHHHHHH
Q 008332           72 DENQIAKFADTVKKKNPSITTILSIGQG----K-----DT-NY-------------SIYSS---MVRNSSHRKSFIDSSI  125 (570)
Q Consensus        72 ~~~~~~~~~~~lk~~~~~~kvllsigg~----~-----~~-~~-------------~~f~~---~~~~~~~r~~fi~siv  125 (570)
                      ....++.+++.++++  +++|++-+--.    .     .. +.             ..|..   -..+++-|+-+++++.
T Consensus       317 ~~~dfk~lV~~~H~~--Gi~VIlD~V~nH~~~d~~~l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~  394 (730)
T PRK12568        317 SPDGFAQFVDACHRA--GIGVILDWVSAHFPDDAHGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSAL  394 (730)
T ss_pred             CHHHHHHHHHHHHHC--CCEEEEEeccccCCccccccccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHH
Confidence            346789999888777  79999876310    0     00 00             01111   2346788999999999


Q ss_pred             HHHHHcCCCceeeec--------------cC-CCCCCCccch--hhhHHHHHHHHhh
Q 008332          126 RIARLYGFRGLDFAW--------------TA-PNTSTDMFNI--GLLFDEWRIAATK  165 (570)
Q Consensus       126 ~~~~~~~~DGidiDw--------------E~-p~~~~~~~~~--~~l~~~lr~~l~~  165 (570)
                      -|+++|++||+-+|=              |+ |.......|+  ..|++++++.+++
T Consensus       395 ~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~  451 (730)
T PRK12568        395 EWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIAS  451 (730)
T ss_pred             HHHHHhCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHH
Confidence            999999999999992              11 2111122343  4799999999875

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=80.92  E-value=5.3  Score=36.75  Aligned_cols=93  Identities=20%  Similarity=0.384  Sum_probs=62.9

Q ss_pred             CCCccccChHHHHHHhcCcccceeeeccCC-ccEEEEEecCCcEEEEEEecC---CCc------------------ccHH
Q 008332          448 VPNLRVYSLADIEAATERFSIRNKLGEGGY-GPVYKGVLPCGEVIAVKKLSK---TST------------------QGFE  505 (570)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~lg~G~f-g~V~~~~~~~~~~vavK~l~~---~~~------------------~~~~  505 (570)
                      .|....|+.     ...+++..+.||.|.. |.|++..+. |+.+|+|....   ...                  ....
T Consensus        26 gPKL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~   99 (207)
T PF13095_consen   26 GPKLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYAD   99 (207)
T ss_pred             CCCcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcC
Confidence            344445554     2267888999999999 999999988 78999999321   000                  0123


Q ss_pred             HHHHHHHHHHccC---CCCc--cceeEEEEeC------------------CeeEEEEecCCCCC
Q 008332          506 EFKNEVMLTAKLQ---HVNL--IRVLGFCIDS------------------EERMLIYEYMPNKS  546 (570)
Q Consensus       506 ~f~~e~~~l~~l~---h~ni--v~l~g~~~~~------------------~~~~lv~e~~~~Gs  546 (570)
                      .|..|++..++++   +.++  |+++|...-.                  ....||.||++...
T Consensus       100 PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~  163 (207)
T PF13095_consen  100 PFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP  163 (207)
T ss_pred             hHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc
Confidence            5889999888874   4455  7888876322                  12357888887654

>PRK12313 glycogen branching enzyme; Provisional

Probab=80.52  E-value=19  Score=39.84  Aligned_cols=91  Identities=14%  Similarity=0.096  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHhhCCCceEEEEEcC-CC--------CCC-c-------------ccccc---cccChHHHHHHHHHHHH
Q 008332           73 ENQIAKFADTVKKKNPSITTILSIGQ-GK--------DTN-Y-------------SIYSS---MVRNSSHRKSFIDSSIR  126 (570)
Q Consensus        73 ~~~~~~~~~~lk~~~~~~kvllsigg-~~--------~~~-~-------------~~f~~---~~~~~~~r~~fi~siv~  126 (570)
                      ...+++++++++++  +++|++=+-- ..        ..+ .             ..|..   -..+++-|+-+++++.-
T Consensus       219 ~~d~k~lv~~~H~~--Gi~VilD~V~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~  296 (633)
T PRK12313        219 PEDFMYLVDALHQN--GIGVILDWVPGHFPKDDDGLAYFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALF  296 (633)
T ss_pred             HHHHHHHHHHHHHC--CCEEEEEECCCCCCCCcccccccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHH
Confidence            46789999888777  7999987531 00        000 0             00100   12368889999999999


Q ss_pred             HHHHcCCCceeeecc-------------C-CCCCCCccc--hhhhHHHHHHHHhh
Q 008332          127 IARLYGFRGLDFAWT-------------A-PNTSTDMFN--IGLLFDEWRIAATK  165 (570)
Q Consensus       127 ~~~~~~~DGidiDwE-------------~-p~~~~~~~~--~~~l~~~lr~~l~~  165 (570)
                      |+++|++||+-+|--             + |.......+  -..|++++++.+++
T Consensus       297 W~~~~~iDG~R~D~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~v~~  351 (633)
T PRK12313        297 WLDEYHLDGLRVDAVSNMLYLDYDEEGEWTPNKYGGRENLEAIYFLQKLNEVVYL  351 (633)
T ss_pred             HHHHhCCcEEEEcChhhhhhcccccccCcCCcccCCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999921             0 000000111  25799999988875

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=80.32  E-value=7.6  Score=35.10  Aligned_cols=84  Identities=18%  Similarity=0.218  Sum_probs=57.7

Q ss_pred             eeeeccCCccEEEEEecCCcEEEEEEec-CCCcc-------cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          470 NKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQ-------GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~~~vavK~l~-~~~~~-------~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ..+++|+-+.++.+.+. |.++.+|.-. +.-..       ....-.+|++++.+++--.|....=...++....|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            35678888888888764 5556666432 21111       123467899999988655555444455667788899999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++-.|.++|...
T Consensus        81 I~G~~lkd~l~~~   93 (204)
T COG3642          81 IEGELLKDALEEA   93 (204)
T ss_pred             eCChhHHHHHHhc
Confidence            9999999998865

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=80.28  E-value=1.2  Score=28.20  Aligned_cols=16  Identities=13%  Similarity=0.524  Sum_probs=6.8

Q ss_pred             eehhhHHHHHHHHHhh
Q 008332          395 LISTAAAALTLLLGCC  410 (570)
Q Consensus       395 ~~~~~~~~~~~~~~~~  410 (570)
                      +++++++++++++++.
T Consensus         8 IIv~V~vg~~iiii~~   23 (38)
T PF02439_consen    8 IIVAVVVGMAIIIICM   23 (38)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3444444444444433

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=80.18  E-value=11  Score=38.76  Aligned_cols=83  Identities=16%  Similarity=0.163  Sum_probs=56.5

Q ss_pred             eeeeccCCccEEEEEecCC-cEEEEEEecCC-----C--cccHHHHHHHHHHHHccC---CCCccceeEEEEeCCeeEEE
Q 008332          470 NKLGEGGYGPVYKGVLPCG-EVIAVKKLSKT-----S--TQGFEEFKNEVMLTAKLQ---HVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~~-~~vavK~l~~~-----~--~~~~~~f~~e~~~l~~l~---h~niv~l~g~~~~~~~~~lv  538 (570)
                      +.||.|.+..||+....+| +.+.||.-.+.     .  +...+.+..|.+.|..+.   ...+.+++.+  ..+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            6789999999999998766 48999975321     1  223456777888877752   2345555544  44567899


Q ss_pred             EecCCCCC-HHHHHhcC
Q 008332          539 YEYMPNKS-LDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~Gs-L~~~L~~~  554 (570)
                      ||++++.. |++.|...
T Consensus       110 ME~L~~~~~lr~~Ll~g  126 (401)
T PRK09550        110 MEDLSDHKILRKGLIDG  126 (401)
T ss_pred             EecCCCccHHHHHHhcC
Confidence            99998654 65666543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	570
3alg_A	353	Crystal Structure Of Class V Chitinase (E115q Mutan		4e-60
3alf_A	353	Crystal Structure Of Class V Chitinase From Nicotia		4e-60
3aqu_A	356	Crystal Structure Of A Class V Chitinase From Arabi		5e-60
1guv_A	366	Structure Of Human Chitotriosidase Length = 366		6e-28
1lg1_A	365	Crystal Structure Of Human Chitotriosidase In Compl		1e-27
1hkk_A	364	High Resoultion Crystal Structure Of Human Chitinas		1e-27
1hki_A	365	Crystal Structure Of Human Chitinase In Complex Wit		1e-27
1waw_A	445	Specificity And Affinity Of Natural Product Cyclope		2e-27
4ay1_A	365	Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch		8e-25
3fxy_A	395	Acidic Mammalian Chinase, Catalytic Domain Length =		1e-23
2ybt_A	381	Crystal Structure Of Human Acidic Chitinase In Comp		1e-23
1hjv_A	362	Crystal Structure Of Hcgp-39 In Complex With Chitin		1e-22
1e9l_A	377	The Crystal Structure Of Novel Mammalian Lectin Ym1		3e-22
1sr0_A	361	Crystal Structure Of Signalling Protein From Sheep(		7e-20
1ljy_A	361	Crystal Structure Of A Novel Regulatory 40 Kda Mamm		2e-19
1xhg_A	361	Crystal Structure Of A 40 Kda Signalling Protein Fr		2e-19
2pi6_A	361	Crystal Structure Of The Sheep Signalling Glycoprot		3e-19
1syt_A	361	Crystal Structure Of Signalling Protein From Goat S		4e-19
2esc_A	361	Crystal Structure Of A 40 Kda Protective Signalling		5e-19
1owq_A	361	Crystal Structure Of A 40 Kda Signalling Protein (S		6e-19
1tfv_A	361	Crystal Structure Of A Buffalo Signaling Glycoprote		7e-19
1zbv_A	361	Crystal Structure Of The Goat Signalling Protein (S		1e-18
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		6e-18
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		7e-18
1itx_A	419	Catalytic Domain Of Chitinase A1 From Bacillus Circ		8e-14
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-13
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-13
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		7e-13
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-12
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-12
3g6l_A	406	The Crystal Structure Of A Chitinase Crchi1 From Th		3e-12
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-11
1jnd_A	420	Crystal Structure Of Imaginal Disc Growth Factor-2		1e-10
1eib_A	540	Crystal Structure Of Chitinase A Mutant D313a Compl		3e-10
1rd6_A	563	Crystal Structure Of S. Marcescens Chitinase A Muta		3e-10
1ll7_A	392	Structure Of The E171q Mutant Of C. Immitis Chitina		4e-10
1d2k_A	392	C. Immitis Chitinase 1 At 2.2 Angstroms Resolution		4e-10
2wly_A	548	Chitinase A From Serratia Marcescens Atcc990 In Com		4e-10
1ll6_A	392	Structure Of The D169n Mutant Of C. Immitis Chitina		4e-10
2wk2_A	540	Chitinase A From Serratia Marcescens Atcc990 In Com		4e-10
1k9t_A	540	Chitinase A Complexed With Tetra-N-Acetylchitotrios		1e-09
1ctn_A	540	Crystal Structure Of A Bacterial Chitinase At 2.3 A		1e-09
1ffr_A	540	Crystal Structure Of Chitinase A Mutant Y390f Compl		1e-09
1ehn_A	540	Crystal Structure Of Chitinase A Mutant E315q Compl		1e-09
1edq_A	540	Crystal Structure Of Chitinase A From S. Marcescens		1e-09
1nh6_A	540	Structure Of S. Marcescens Chitinase A, E315l, Comp		1e-09
1w9p_A	433	Specificity And Affinity Of Natural Product Cyclope		3e-09
1wno_A	395	Crystal Structure Of A Native Chitinase From Asperg		4e-09
3ars_A	584	Crystal Structure Analysis Of Chitinase A From Vibr		1e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-08
1ur9_A	499	Interactions Of A Family 18 Chitinase With The Desi		4e-08
1h0g_A	499	Complex Of A Chitinase With The Natural Product Cyc		4e-08
1e6n_B	499	Chitinase B From Serratia Marcescens Inactive Mutan		5e-08
1e15_A	499	Chitinase B From Serratia Marcescens Length = 499		5e-08
1ogb_A	499	Chitinase B From Serratia Marcescens Mutant D142n L		5e-08
1e6z_A	498	Chitinase B From Serratia Marcescens Wildtype In Co		5e-08
3b9a_A	584	Crystal Structure Of Vibrio Harveyi Chitinase A Com		8e-08
3b8s_A	584	Crystal Structure Of Wild-Type Chitinase A From Vib		8e-08
1goi_A	499	Crystal Structure Of The D140n Mutant Of Chitinase		2e-07
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-07
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-07
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-07
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		4e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-07
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-07
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-07
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		4e-07
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		4e-07
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		4e-07
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		4e-07
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-07
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		4e-07
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		5e-07
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		5e-07
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		5e-07
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		5e-07
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		5e-07
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		5e-07
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-07
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-07
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-07
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		5e-07
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		8e-07
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		8e-07
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		8e-07
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		8e-07
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		8e-07
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		8e-07
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		8e-07
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		9e-07
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		9e-07
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		9e-07
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-07
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		9e-07
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		9e-07
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-06
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-06
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-06
1kfw_A	435	Structure Of Catalytic Domain Of Psychrophilic Chit		4e-06
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		4e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-06
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		5e-06
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		5e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		5e-06
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		6e-06
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-05
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-05
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-05
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-05
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		3e-05
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-05
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		4e-05
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-05
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-05
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-05
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-05
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-05
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		4e-05
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		4e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		4e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		5e-05
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		6e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		6e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		7e-05
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		7e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		7e-05
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		7e-05
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-04
3qok_A	420	Crystal Structure Of Putative Chitinase Ii From Kle		2e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-04
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-04
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		3e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		3e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		3e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		3e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		3e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		3e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-04
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		3e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		4e-04
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		4e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		4e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		4e-04
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		4e-04
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-04
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		4e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		5e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		5e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		5e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-04
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		5e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-04
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		5e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		5e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		5e-04
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		5e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		5e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		5e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		5e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		5e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		5e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		5e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		5e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		5e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		5e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		5e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		5e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		5e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		5e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		5e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		5e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		5e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		6e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		6e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		6e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		6e-04
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		6e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		6e-04
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		6e-04
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		6e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		6e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		7e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		7e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		7e-04
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		7e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		7e-04
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		7e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		7e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		7e-04
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		7e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		7e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		7e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		7e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		7e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		8e-04
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		8e-04
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		8e-04
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		8e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		8e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		8e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		8e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		8e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		8e-04
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		8e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-04
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		8e-04
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		8e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		9e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		9e-04
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		9e-04

>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353

Iteration: 1
 Score =  229 bits (583), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 203/351 (57%), Gaps = 17/351 (4%)
Query: 27  IRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
           ++ GY        ++ I+  LFTHL C+ AD+N    QL +S P +++   +F  TV++K
Sbjct: 4   VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRK 62
Query: 87  NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS 146
           NPS+ T LSI  G+  N + Y  M R  + RKSFIDSSIR+AR  GF GLD  W  P ++
Sbjct: 63  NPSVKTFLSIAGGR-ANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWQYPLSA 121
Query: 147 TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN--SYLLNSIQRNLNW 204
            DM N+G L +EWR  A   +A+NS R  + L+LTA    SP  N  +Y + S+ RNL+W
Sbjct: 122 ADMTNLGTLLNEWR-TAINTEARNSGR--AALLLTAAVSNSPRVNGLNYPVESLARNLDW 178
Query: 205 IHAVTASYYEP-VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFY 263
           I+ +   +Y P  S + T   A L+  ++     S    + AWI+ G+   KLV+ +PFY
Sbjct: 179 INLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSGSDGINAWIQAGVPTKKLVLGIPFY 235
Query: 264 GYAWTLVKPEDNGIGAAAAGPA---LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY 320
           GYAW LV    +G+ A AAG +     D G +TY +I+++I         +YN+T   +Y
Sbjct: 236 GYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNATIVGDY 293
Query: 321 FSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQ 371
             +G+ W  +DD + VR K+ Y K + LLGY+AW V+  D +W LS+ A+Q
Sbjct: 294 CYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVA-GDQNWGLSRTASQ 343

>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353

Iteration: 1
 Score =  229 bits (583), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 203/351 (57%), Gaps = 17/351 (4%)
Query: 27  IRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
           ++ GY        ++ I+  LFTHL C+ AD+N    QL +S P +++   +F  TV++K
Sbjct: 4   VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRK 62
Query: 87  NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS 146
           NPS+ T LSI  G+  N + Y  M R  + RKSFIDSSIR+AR  GF GLD  W  P ++
Sbjct: 63  NPSVKTFLSIAGGR-ANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSA 121
Query: 147 TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN--SYLLNSIQRNLNW 204
            DM N+G L +EWR  A   +A+NS R  + L+LTA    SP  N  +Y + S+ RNL+W
Sbjct: 122 ADMTNLGTLLNEWR-TAINTEARNSGR--AALLLTAAVSNSPRVNGLNYPVESLARNLDW 178
Query: 205 IHAVTASYYEP-VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFY 263
           I+ +   +Y P  S + T   A L+  ++     S    + AWI+ G+   KLV+ +PFY
Sbjct: 179 INLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSGSDGINAWIQAGVPTKKLVLGIPFY 235
Query: 264 GYAWTLVKPEDNGIGAAAAGPA---LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY 320
           GYAW LV    +G+ A AAG +     D G +TY +I+++I         +YN+T   +Y
Sbjct: 236 GYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNATIVGDY 293
Query: 321 FSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQ 371
             +G+ W  +DD + VR K+ Y K + LLGY+AW V+  D +W LS+ A+Q
Sbjct: 294 CYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVA-GDQNWGLSRTASQ 343

>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356

Iteration: 1
 Score =  228 bits (582), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/343 (38%), Positives = 202/343 (58%), Gaps = 12/343 (3%)
Query: 40  ISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQG 99
           ++ I+  LFTHL C+ AD+NS T Q+++S  +++ + + F  TV+++NPS+ T+LSIG G
Sbjct: 18  VTDIDSSLFTHLFCAFADLNSQTNQVTVS-SANQPKFSTFTQTVQRRNPSVKTLLSIGGG 76
Query: 100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEW 159
              + + Y+SM  N + RKSFIDSSIR+AR YGF GLD  W  P+++T+M N G L  EW
Sbjct: 77  I-ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREW 135
Query: 160 RIAATKLDAKNSTRQQSLLILTARFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVS 217
           R A     A+ S+  +  L+L A   YS    S  Y ++++  +L+W++ +   +Y P  
Sbjct: 136 RSAVV---AEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGW 192
Query: 218 TNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI 277
           +  T PPAAL+   +     S D   ++WI+ GL A K V+  P+YGYAW L     +  
Sbjct: 193 SRVTGPPAALFDPSNA--GPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSY 250
Query: 278 GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
            A   G A+   G + Y +I+  I   G     +YNST   +Y   GT W G+DD +++ 
Sbjct: 251 YAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYCYAGTNWIGYDDNQSIV 308
Query: 338 AKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASV 380
            K+ YAK++ LLGY++W V  DD+   LS+AA+Q    T+A+ 
Sbjct: 309 TKVRYAKQRGLLGYFSWHVGADDNS-GLSRAASQAWDATTATT 350

>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366

Iteration: 1
 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
           ++  L THLI + A +  T +QLS +  +DE    +F + +KK NP + T+L+IG G + 
Sbjct: 25  LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
               ++ MV  +++R++F++S+IR  R Y F GLD  W  P +           D+ R  
Sbjct: 81  GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
               D  N+ +Q++      R   S   P   +Y+     ++ I +NL++++ +   +  
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
            +E V T   +P            + + D  ++ W+E+G  A KL++ +P YG ++TL  
Sbjct: 196 SWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLEKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAA-----GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
             D  +GA A      GP   + G++ Y ++ +        +Q       +V Y      
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           W GFDDVE+ + K++Y K+K L G   W +  DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343

>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
           ++  L THLI + A +  T +QLS +  +DE    +F + +KK NP + T+L+IG G + 
Sbjct: 25  LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
               ++ MV  +++R++F++S+IR  R Y F GLD  W  P +           D+ R  
Sbjct: 81  GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
               D  N+ +Q++      R   S   P   +Y+     ++ I +NL++++ +   +  
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
            +E V T   +P            + + D  ++ W+++G  A KL++ +P YG ++TL  
Sbjct: 196 SWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
             D  +GA A G     P   + G++ Y ++ +        +Q       +V Y      
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           W GFDDVE+ + K++Y K+K L G   W +  DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343

>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
           ++  L THLI + A +  T +QLS +  +DE    +F + +KK NP + T+L+IG G + 
Sbjct: 25  LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
               ++ MV  +++R++F++S+IR  R Y F GLD  W  P +           D+ R  
Sbjct: 81  GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
               D  N+ +Q++      R   S   P   +Y+     ++ I +NL++++ +   +  
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
            +E V T   +P            + + D  ++ W+++G  A KL++ +P YG ++TL  
Sbjct: 196 SWEKV-TGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
             D  +GA A G     P   + G++ Y ++ +        +Q       +V Y      
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           W GFDDVE+ + K++Y K+K L G   W +  DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343

>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
           ++  L THLI + A +  T +QLS +  +DE    +F + +KK NP + T+L+IG G + 
Sbjct: 25  LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
               ++ MV  +++R++F++S+IR  R Y F GLD  W  P +           D+ R  
Sbjct: 81  GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
               D  N+ +Q++      R   S   P   +Y+     ++ I +NL++++ +   +  
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
            +E V T   +P            + + D  ++ W+++G  A KL++ +P YG ++TL  
Sbjct: 196 SWEKV-TGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
             D  +GA A G     P   + G++ Y ++ +        +Q       +V Y      
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           W GFDDVE+ + K++Y K+K L G   W +  DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343

>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
           ++  L THLI + A +  T +QLS +  +DE    +F + +KK NP + T+L+IG G + 
Sbjct: 25  LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
               ++ MV  +++R++F++S+IR  R Y F GLD  W  P +           D+ R  
Sbjct: 81  GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
               D  N+ +Q++      R   S   P   +Y+     ++ I +NL++++ +   +  
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
            +E V T   +P            + + D  ++ W+++G  A KL++ +P YG ++TL  
Sbjct: 196 SWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
             D  +GA A G     P   + G++ Y ++ +        +Q       +V Y      
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQ-----KVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           W GFDDVE+ + K++Y K+K L G   W +  DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343

>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365

Iteration: 1
 Score =  111 bits (278), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 155/330 (46%), Gaps = 18/330 (5%)
Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
           T   I+  L +HLI S A I +    +       E  + +  +++K KNP +  +LSIG 
Sbjct: 22  TPENIDPFLCSHLIYSFASIENNKVIIK---DKSEVMLYQTINSLKTKNPKLKILLSIG- 77
Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDE 158
           G       +  MV +S+ R  FI+S I   R + F GLD +W  P+   +  +  +L  E
Sbjct: 78  GYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYPDQKENT-HFTVLIHE 136
Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVT----ASYYE 214
              A  K D   ST+++ LL            NSY +  + ++L++I+ ++     S+ +
Sbjct: 137 LAEAFQK-DFTKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEK 195
Query: 215 PVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPED 274
           P+ T   +P +  +         + +  +  WI +G+ ++K+VM +P YG+++TL   E 
Sbjct: 196 PLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLASAET 255
Query: 275 N----GIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
                  G  AAGP    SG + Y +I   +K  G  +  + +   +V Y   G  W G+
Sbjct: 256 TVGAPASGPGAAGPITESSGFLAYYEICQFLK--GAKITRLQDQ--QVPYAVKGNQWVGY 311
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           DDV+++  K+ + K   L G   W +  DD
Sbjct: 312 DDVKSMETKVQFLKNLNLGGAMIWSIDMDD 341

>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395

Iteration: 1
 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
           IN  L THLI + A + +       ++  ++  + +  + +K KN  + T+L+IG G + 
Sbjct: 25  INPCLCTHLIYAFAGMQNNEI---TTIEWNDVTLYQAFNGLKNKNSQLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDE 158
             + +++MV    +R++FI S I+  R Y F GLDF W  P +      D     +L  E
Sbjct: 81  GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQE 140
Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST 218
            R  A + +AK   + + ++        S   + Y +  + + L++IH +T   +     
Sbjct: 141 MR-EAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWE- 198
Query: 219 NFTAPPAALY--GSISGRFAR-STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
            +T   + LY   + +G  A  + D V+  W + G  A+KL++  P YG+ + L  P + 
Sbjct: 199 GYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNT 258
Query: 276 GI-----GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
           GI     GA  AGP   +SG+  Y +I   +K         +++  EV Y   G VW G+
Sbjct: 259 GIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWDAPQEVPYAYQGNVWVGY 315
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           D+V++   K  + K  +  G   W +  DD
Sbjct: 316 DNVKSFDIKAQWLKHNKFGGAMVWAIDLDD 345

>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
           IN  L THLI + A + +       ++  ++  + +  + +K KN  + T+L+IG G + 
Sbjct: 29  INPCLCTHLIYAFAGMQNNEI---TTIEWNDVTLYQAFNGLKNKNSQLKTLLAIG-GWNF 84
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDE 158
             + +++MV    +R++FI S I+  R Y F GLDF W  P +      D     +L  E
Sbjct: 85  GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQE 144
Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST 218
            R  A + +AK   + + ++        S   + Y +  + + L++IH +T   +     
Sbjct: 145 MR-EAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWE- 202
Query: 219 NFTAPPAALY--GSISGRFAR-STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
            +T   + LY   + +G  A  + D V+  W + G  A+KL++  P YG+ + L  P + 
Sbjct: 203 GYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNT 262
Query: 276 GI-----GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
           GI     GA  AGP   +SG+  Y +I   +K         +++  EV Y   G VW G+
Sbjct: 263 GIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWDAPQEVPYAYQGNVWVGY 319
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           D++++   K  + K  +  G   W +  DD
Sbjct: 320 DNIKSFDIKAQWLKHNKFGGAMVWAIDLDD 349

>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 23/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP++ T+LS+G G +     
Sbjct: 29  LCTHIIYSFANISNDHID---TWEWNDVTLYGMLNTLKNRNPNLKTLLSVG-GWNFGSQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S +  N+  R++FI S     R +GF GLD AW  P    D  +   L  E +    K 
Sbjct: 85  FSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKQHFTTLIKEMKAEFIK- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEP--VSTNFTA 222
           +A+   +Q   L+L+A          +SY +  I ++L++I  +T  ++     +T   +
Sbjct: 143 EAQPGKKQ---LLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHS 199
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
           P        S     +TD  +   +  G  A KLVM +P +G ++TL   E  G+GA  +
Sbjct: 200 PLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLASSE-TGVGAPIS 258
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +      ++G + Y +I + ++  G  V  +     +V Y + G  W G+DD E+V+
Sbjct: 259 GPGIPGRFTKEAGTLAYYEICDFLR--GATVHRILGQ--QVPYATKGNQWVGYDDQESVK 314
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
           +K+ Y K+++L G   W +  DD
Sbjct: 315 SKVQYLKDRQLAGAMVWALDLDD 337

>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377

Iteration: 1
 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 25/328 (7%)
Query: 47  LFTHLICSSADI--NSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY 104
           L THLI + A +  N  TY     L   E       + +K KN  + T+L+IG G     
Sbjct: 29  LCTHLIYAFAGMQNNEITYTHEQDLRDYEA-----LNGLKDKNTELKTLLAIG-GWKFGP 82
Query: 105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDEWR 160
           + +S+MV    +R+ FI S IR  R Y F GL+  W  P +      D     +L  E R
Sbjct: 83  APFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMR 142
Query: 161 IAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNF 220
            A  +   +    +  LL  T         + Y +  + ++L++I  +T   ++P    +
Sbjct: 143 KAFEEESVEKDIPRL-LLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDP-KDGY 200
Query: 221 TAPPAALYGS---ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI 277
           T   + LY S   I      + D ++  W + G +++KL++  P YG+ + L  P   GI
Sbjct: 201 TGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPAYGHTFILSDPSKTGI 260
Query: 278 GA---AAAGPALY--DSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDD 332
           GA   +   P  Y  +SGL+ Y ++   +     +V   +++  EV Y   G  W G+D+
Sbjct: 261 GAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEV---WDAPQEVPYAYQGNEWVGYDN 317
Query: 333 VEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
           V + + K  + K+  L G   W +  DD
Sbjct: 318 VRSFKLKAQWLKDNNLGGAVVWPLDMDD 345

>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 24/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP + T+LS+G G +     
Sbjct: 29  LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S++   +  R++FI S     R +GF GLD AW  P    D  ++  L  E +    + 
Sbjct: 85  FSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTTLVKEMKAEFIR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEP--VSTNFTA 222
           +A+  T Q   L+L+A       A    Y +  I R+L++I  +T  ++     +    +
Sbjct: 143 EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
           P  A     S RF+ + D  +   +  G  A+KLVM +P +G ++TL   + + +GA  +
Sbjct: 200 PLFAGNEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTD-VGAPVS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +      + G++ Y +I + +  +G       +   +V Y + G  W  +DD E+V+
Sbjct: 258 GPGVPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
            K  Y K ++L G   W +  DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336

>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 24/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP + T+LS+G G +     
Sbjct: 29  LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S++   +  R++FI S     R +GF GLD AW  P    D  ++  L  E + A    
Sbjct: 85  FSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
           +A+  T +   L+L+A       A    Y +  I R+L++I  +T  ++           
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
               G+  G  RF+ + D  +   +  G  A+KLVM +P +G ++TL   + +G GA  +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTDG-GAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +      + G++ Y +I + +  +G       +   +V Y + G  W  +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
            K  Y K ++L G   W +  DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336

>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP++ T+LS+G G +     
Sbjct: 29  LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGPQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S +   +  R++FI S     R +GF GLD AW  P    D  ++  L  E +    + 
Sbjct: 85  FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTTLVKEMKAEFIR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
           +A+  T Q   L+L+A       A    Y +  I R+L++I  +T  ++           
Sbjct: 143 EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
               G    S RF+ + D  +   +  G  A+KLVM +P +G ++TL   + + +GA  +
Sbjct: 200 PLFRGQEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGKSFTLASSKTD-VGAPVS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +      + G++ Y +I + ++  G       +   +V Y + G  W  +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGILAYYEICDFLQ--GATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
            K  Y K ++L G   W +  DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336

>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 21/289 (7%)
Query: 81  DTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAW 140
           +T+K +NP + T+LS+G G +     +S +   +  R++FI S     R +GF GLD AW
Sbjct: 60  NTLKNRNPKLKTLLSVG-GWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAW 118
Query: 141 TAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA--NSYLLNSI 198
             P    D  ++  L  E +    + +A+  T Q   L+L+A       A    Y +  I
Sbjct: 119 LYPGRR-DKRHLTTLVKEMKAEFIR-EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQI 173
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGS--ISGRFARSTDQVLKAWIERGLSADKL 256
            R+L++I  +T  ++               G+   S RF+ + D  +   +  G  A+KL
Sbjct: 174 SRHLDFISLLTYDFHGAWRQTVGHHSPLFRGNEDASSRFSNA-DYAVSYMLRLGAPANKL 232
Query: 257 VMCLPFYGYAWTLVKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVM 311
           VM +P +G ++TL   + + +GA  +GP +      + G++ Y +I + +  +G      
Sbjct: 233 VMGIPTFGRSFTLASSKTD-VGAPVSGPGIPGRFTKEKGILAYYEICDFL--HGATTHRF 289
Query: 312 YNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
            +   +V Y + G  W  +DD E+V+ K  Y K ++L G   W +  DD
Sbjct: 290 RDQ--QVPYATKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336

>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP + T+LS+G G +     
Sbjct: 29  LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S +   +  R++FI S     R +GF GLD AW  P    D  ++  L  E + A    
Sbjct: 85  FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
           +A+  T +   L+L+A       A    Y +  I R+L++I  +T  ++           
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
               G+   S RF+ + D  +   +  G  A+KLVM +P +G ++TL   + +G GA  +
Sbjct: 200 PLFRGNSDASSRFS-NADYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTDG-GAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +      + G++ Y +I + +  +G       +   +V Y + G  W  +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
            K  Y K ++L G   W +  DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336

>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 151/323 (46%), Gaps = 24/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP++ T+LS+G G +     
Sbjct: 29  LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGSER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S +   +  R++FI S     R +GF GLD AW  P    D  ++  L  E +    + 
Sbjct: 85  FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
           +A+  T Q   L+L+A       A    Y +  I R+L++I  +T  ++           
Sbjct: 143 EAQAGTEQ---LLLSAAVTAGKIAIDRGYDIAQISRHLDFISLLTYDFHGGWRGTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
               G+  G  RF+ + D  +   +  G  A+KLVM +P +G ++TL       +GA  +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSSTR-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +      + G++ Y +I + +  +G       +   +V Y + G  W  +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
            K  Y K ++L G   W +  DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336

>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361

Iteration: 1
 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP++ T+LS+G G +     
Sbjct: 29  LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGSER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S +   +  R++FI S     R +GF GLD AW  P    D  ++  L  E +    + 
Sbjct: 85  FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
           +A+  T Q   L+L+A       A    Y +  I R+L++I  +T  ++           
Sbjct: 143 EAQAGTEQ---LLLSAAVPAGKIAIDRGYDIAQISRHLDFISLLTYDFHGGWRGTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
               G+  G  RF+ + D  +   +  G  A+KLVM +P +G ++TL   + + +GA  +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSKTD-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +      + G + Y +I + +  +G       +   +V Y + G  W  +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGTLAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
            K  Y K ++L G   W +  DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336

>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP++ T+LS+G G +     
Sbjct: 29  LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNYGSQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S +   +  R++FI S     R +GF GLD AW  P    D  ++  L  E +    + 
Sbjct: 85  FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLWPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
           +A+  T Q   L+L+A       A    Y +  I R+L++I  +T  ++           
Sbjct: 143 EAQAGTEQ---LLLSAAVTAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
               G+   S RF+ + D  +   +  G  A+KLVM +P +G ++TL   + + +GA  +
Sbjct: 200 PLFRGNEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSKTD-VGAPIS 257
Query: 283 GPALYD-----SGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +        G++ Y +I + +  +G       +   +V Y + G  W  +DD E+V+
Sbjct: 258 GPGIPGRFTKWKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
            K  Y K ++L G   W +  DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336

>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47  LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
           L TH+I S A+I++       +   ++  +    +T+K +NP + T+LS+G G +     
Sbjct: 29  LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
           +S +   +  R++FI S     R +GF GLD AW  P    D  ++  L  E + A    
Sbjct: 85  FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
           +A+  T +   L+L+A       A    Y +  I R+L++I  +T  ++           
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
               G+   S RF+ + D  +   +  G  A+KLVM +P +G ++TL   + + +GA  +
Sbjct: 200 PLFRGNSDASSRFS-NADYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTD-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
           GP +      + G++ Y +I + +  +G       +   +V Y + G  W  +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
            K  Y K ++L G   W +  DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFK 508
            L+ +SL +++ A++ F  +N LG GG+G VYKG L  G ++AVK+L +  TQG E +F+
Sbjct: 16  QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            EV + +   H NL+R+ GFC+   ER+L+Y YM N S+
Sbjct: 76  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFK 508
            L+ +SL +++ A++ FS +N LG GG+G VYKG L  G ++AVK+L +   QG E +F+
Sbjct: 24  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            EV + +   H NL+R+ GFC+   ER+L+Y YM N S+
Sbjct: 84  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122

>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 54/318 (16%)
Query: 74  NQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF 133
           NQ+ K    +K+ NP++ TI+S+G    +N   +S +   ++ R+ F +S++   R Y F
Sbjct: 111 NQLNK----LKQTNPNLKTIISVGGWTWSNR--FSDVAATAATREVFANSAVDFLRKYNF 164
Query: 134 RGLDFAWTAPNTS---------TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARF 184
            G+D  W  P +           D  N  LL  + R    KLDA  +   +  L+  A  
Sbjct: 165 DGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIR---EKLDAAGAVDGKKYLLTIASG 221
Query: 185 RYSPPANSYLLNSIQRNLNWIHAVTASY---------------YEPVSTNFTAPPAALYG 229
             +  A +  L  I   ++WI+ +T  +               Y+P ++    P A  + 
Sbjct: 222 ASATYAANTELAKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFN 281
Query: 230 SISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNG-----IGAAAAGP 284
             +G             ++ G+ A KLV+ +PFYG  W       NG      G ++ G 
Sbjct: 282 VAAGAQGH---------LDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVG- 331
Query: 285 ALYDSGLVTYKKIK-NHIKTYGPDVQVMYNSTYEVNYF--STGTVWFGFDDVEAVRAKIA 341
             +++G   +  ++ N+I   G      +N T +V Y   ++   +  +DD E+V  K A
Sbjct: 332 -TWEAGSFDFYDLEANYINKNG--YTRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTA 388
Query: 342 YAKEKRLLGYYAWQVSFD 359
           Y K K L G   W++S D
Sbjct: 389 YIKSKGLGGAMFWELSGD 406

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
           +S  +++  T  F  R      NK+GEGG+G VYKG +     +AVKKL+     T+ + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 73
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            ++F  E+ + AK QH NL+ +LGF  D ++  L+Y YMPN SL
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
           +S  +++  T  F  R      NK+GEGG+G VYKG +     +AVKKL+     T+ + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 73
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            ++F  E+ + AK QH NL+ +LGF  D ++  L+Y YMPN SL
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
           +S  +++  T  F  R      NK+GEGG+G VYKG +     +AVKKL+     T+ + 
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 67
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            ++F  E+ + AK QH NL+ +LGF  D ++  L+Y YMPN SL
Sbjct: 68  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 63/98 (64%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA 515
           L D+E AT  F  +  +G G +G VYKGVL  G  +A+K+ +  S+QG EEF+ E+   +
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
             +H +L+ ++GFC +  E +LIY+YM N +L  +L+G
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 63/98 (64%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA 515
           L D+E AT  F  +  +G G +G VYKGVL  G  +A+K+ +  S+QG EEF+ E+   +
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
             +H +L+ ++GFC +  E +LIY+YM N +L  +L+G
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128

>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 83  VKKKNPSITTILSIGQGK-DTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT 141
           +KK N S+  +LSIG     TN+   +S     + R +F  +++   + +GF G+D  W 
Sbjct: 98  LKKANRSLKIMLSIGGWTWSTNFPAAAS---TEATRATFAKTAVEFMKDWGFDGIDVDWE 154
Query: 142 APNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL-----LN 196
            P + TD  N+ LL    R    +LD+ ++T         +    + P++  +     L 
Sbjct: 155 YPASETDANNMVLLLQRVR---QELDSYSATYANGYHFQLSIAAPAGPSHYNVLKLAQLG 211
Query: 197 SIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSAD 254
           S+  N+N +    A  ++ VS + T     LY S S   +   ST   + A+I  G+ A 
Sbjct: 212 SVLDNINLMAYDYAGSWDSVSGHQT----NLYPSTSNPSSTPFSTKAAVDAYIAAGVPAS 267
Query: 255 KLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNS 314
           K+++ +P YG A   V  +  G   +  G   ++SG+  YK +     T   D      +
Sbjct: 268 KIILGMPIYGRA--FVGTDGPGKPYSTIGEGSWESGIWDYKVLPKAGATVITDSAA--GA 323
Query: 315 TYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
           TY  +Y S+      +D  + VR K++YAK   L G   W+ S D
Sbjct: 324 TY--SYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASAD 366

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
           +S  +++  T  F  R      NK GEGG+G VYKG +     +AVKKL+     T+ + 
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 64
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            ++F  E+ + AK QH NL+ +LGF  D ++  L+Y Y PN SL
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108

>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 153/375 (40%), Gaps = 71/375 (18%)
Query: 49  THLICSSADI---NSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY- 104
           +HL+   A +   N   Y ++ +L   ++Q ++   ++K+K P +  +LS+G   D +  
Sbjct: 34  SHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVT-SLKRKYPHLKVLLSVGGDHDIDPD 92
Query: 105 --SIYSSMVRNSSHRK-SFIDSSIRIARLYGFRGLDFAWTAPNTST-------------- 147
             + Y  ++     R+  FI S+  + + YGF GLD A+  P                  
Sbjct: 93  HPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSI 152
Query: 148 -DMFNIGLLFD------EWRIAATKLDAKNSTRQQSLLI-------LTARFRYSPPANSY 193
             +F    + D      + +  A   D K+S R    L+       + + + +  PA + 
Sbjct: 153 KKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVNSTWYFDIPALNG 212
Query: 194 LLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSA 253
           L++ +  NL     +T +   P   +++AP     GS       + D  ++ W+ +G  +
Sbjct: 213 LVDFV--NLATFDFLTPAR-NPEEADYSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPS 269
Query: 254 DKLVMCLPFYGYAWTLVKPEDNGI----------GAAAAGPALYDSGLVTYKKIKNHIKT 303
           +K+ + +  YG AW L K  D+G+          G A  G      GL++Y +I   +  
Sbjct: 270 NKINLGVATYGNAWKLTK--DSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGKLSN 327
Query: 304 YGPDVQVMYNSTYEVNYFSTGT------------------VWFGFDDVEAVRAKIAYAKE 345
             P  Q +  +   +   S  T                  +W  +DD ++   K AYA+ 
Sbjct: 328 --PQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYARV 385
Query: 346 KRLLGYYAWQVSFDD 360
           K L G   + +S+DD
Sbjct: 386 KNLGGVALFDLSYDD 400

>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D AW 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIAWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L  +   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
               +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 259 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 315
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L A+   + +    ++A        + 
Sbjct: 316 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 372
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 373 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 423
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 424 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 483
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
           +   +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 484 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 540
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 541 IDADNGDILNSMNASLGNS 559

>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 40/293 (13%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
           +KK N ++ T+LSIG    T    + +       RK F D+S+++ +  GF G+D  W  
Sbjct: 80  LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLLNS 197
           P       +  LL    R A     AK+   ++ LL + +      PA     N   L  
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIAS------PAGPQNYNKLKLAE 191
Query: 198 IQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIE 248
           + + L+        ++  ++ +F+     + G +S  F  +T         D+ +K +I+
Sbjct: 192 MDKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIK 243
Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGP 306
            G+ A+K+V+ +P YG A+       +GIG +    G   +++G+  YK +       G 
Sbjct: 244 AGVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GA 295
Query: 307 DVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
            V  + +     +Y         +D V+    K  Y  +  + G   W+ S D
Sbjct: 296 QVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348

>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 40/293 (13%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
           +KK N ++ T+LSIG    T    + +       RK F D+S+++ +  GF G+D  W  
Sbjct: 80  LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLLNS 197
           P       +  LL    R A     AK+   ++ LL + +      PA     N   L  
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIAS------PAGPQNYNKLKLAE 191
Query: 198 IQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIE 248
           + + L+        ++  ++ +F+     + G +S  F  +T         D+ +K +I+
Sbjct: 192 MDKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIK 243
Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGP 306
            G+ A+K+V+ +P YG A+       +GIG +    G   +++G+  YK +       G 
Sbjct: 244 AGVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GA 295
Query: 307 DVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
            V  + +     +Y         +D V+    K  Y  +  + G   W+ S D
Sbjct: 296 QVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348

>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L A+   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLTQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
           +   +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 40/293 (13%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
           +KK N ++ T+LSIG    T    + +       RK F D+S+++ +  GF G+D  W  
Sbjct: 80  LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDINWEY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLLNS 197
           P       +  LL    R A     AK+   ++ LL + +      PA     N   L  
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIAS------PAGPQNYNKLKLAE 191
Query: 198 IQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIE 248
           + + L+        ++  ++ +F+     + G +S  F  +T         D+ +K +I+
Sbjct: 192 MDKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIK 243
Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGP 306
            G+ A+K+V+ +P YG A+       +GIG +    G   +++G+  YK +       G 
Sbjct: 244 AGVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GA 295
Query: 307 DVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
            V  + +     +Y         +D V+    K  Y  +  + G   W+ S D
Sbjct: 296 QVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348

>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L A+   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIG--AAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLTQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
           +   +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L  +   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++ ++Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSYAFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
               +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L  +   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSTETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
               +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L  +   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSFDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
               +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWQ 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L  +   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
               +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L  +   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
               +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K+ +P +  + SIG    ++   +   + +   R  F+ S     + + F  G+D  W 
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWL 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
            P       N+G         LL  E R    +L  +   + +    ++A        + 
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
              N  Q +++ I  ++  +Y           T   AP   P   Y +++G         
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIG--AAAAGP--ALYDSGLVTYKKIK 298
           + A + +G+   K+V+    YG  WT V    N I     A GP    +++G+V Y++I 
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
           +   +   + Q  Y++T E  Y    STG +   FDD  +V+AK  Y  +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
           +  D+ D L S  A+  +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536

>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
           +KK+N ++  +LSIG    T    ++      + RK+F  +++++ +  GF GLD  W  
Sbjct: 121 LKKQNRNLKVLLSIGGW--TYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEY 178
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL----LNSI 198
           P       +  LL  E R A     A N+  Q  LL +      SP     +    L  +
Sbjct: 179 PENDQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVA-----SPAGPDKIKVLHLKDM 233
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKL 256
            + L++ + +   Y    S+  +   A +Y   S   +   +T   L  +   G+ A+K+
Sbjct: 234 DQQLDFWNLMAYDYAGSFSS-LSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKI 292
Query: 257 VMCLPFYGYAWTLV----KPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMY 312
           V+ +P YG ++       KP  NG+G  +    ++D   +       H+    PD+   Y
Sbjct: 293 VLGMPLYGRSFANTDGPGKPY-NGVGQGSWENGVWDYKALPQAGATEHVL---PDIMASY 348
Query: 313 NSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
                 +Y +T      +D+ +    K  Y K   L G   W  S D
Sbjct: 349 ------SYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD 389

>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
           +KK+N ++  +LSIG    T    ++      + RK+F  +++++ +  GF GLD  W  
Sbjct: 83  LKKQNRNLKVLLSIGGW--TYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEY 140
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL----LNSI 198
           P       +  LL  E R A     A N+  Q  LL +      SP     +    L  +
Sbjct: 141 PENDQQANDFVLLLREVRTALDSYSAANAGGQHFLLTVA-----SPAGPDKIKVLHLKDM 195
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKL 256
            + L++ + +   Y    S+  +   A +Y   S   +   +T   L  +   G+ A+K+
Sbjct: 196 DQQLDFWNLMAYDYAGSFSS-LSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKI 254
Query: 257 VMCLPFYGYAWTLV----KPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMY 312
           V+ +P YG ++       KP  NG+G  +    ++D   +       H+    PD+   Y
Sbjct: 255 VLGMPLYGRSFANTDGPGKPY-NGVGQGSWENGVWDYKALPQAGATEHVL---PDIMASY 310
Query: 313 NSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
                 +Y +T      +D+ +    K  Y K   L G   W  S D
Sbjct: 311 ------SYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD 351

>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 136/335 (40%), Gaps = 66/335 (19%)
Query: 83  VKKKNPSITTILSIGQG--KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFA 139
           +K++NP +  I SIG G   D  Y        +  +R +F+ S  +  + + F  G+D  
Sbjct: 238 LKQRNPDLKIIPSIGGGTLSDPFYDFV-----DKKNRDTFVASVKKFLKTWKFYDGVDID 292
Query: 140 WTAPNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP 189
           W  P          D  N G     L  E R+   +L+A+  T +   L       Y   
Sbjct: 293 WEFPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKI 350
Query: 190 ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR------------ 237
            +    +++Q  +++I A+T  +Y   + N      ALY    G F R            
Sbjct: 351 EDVDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDEN 405
Query: 238 ---------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAA-- 280
                    + D  ++  + +G+ A+KLV+    YG  W      TL  P D   G A  
Sbjct: 406 GEPYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATG 465
Query: 281 ----AAGPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFG 329
               +    +++ G++ YK IK+ +     T     +  Y++  E  +    STG +   
Sbjct: 466 KLKGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-IT 524
Query: 330 FDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
           FDD  +V AK  YAK   L G ++W++  D+ D L
Sbjct: 525 FDDHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN 509
           NL   S+   E      ++++KLG G YG VY GV     +    K  K  T   EEF  
Sbjct: 18  NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLK 77
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           E  +  +++H NL+++LG C       ++ EYMP  +L  YL
Sbjct: 78  EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL 119

>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37  VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
           VS I+       TH+  S  DINS    L  +     N  AK  D V      K  NPS+
Sbjct: 33  VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91  TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
             + SIG    +N     ++ Y + V+  + R  F  S +RI + YGF G+D  W  P  
Sbjct: 89  RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
           +  D F   L   E R      T  D + +   Q L I  A   +        L  I   
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
           L++I+ +T   A  +E V+ +     AAL+G  +G                         
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
            F+ + D  V +  +  G+ + K+VM +PFYG A+  V   + G  ++ + P        
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
                         D  + +Y++++  ++  YG   Q ++N   +  Y   +   ++  +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           DD E+ + K  Y K+++L G   W +  D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411

>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37  VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
           VS I+       TH+  S  DINS    L  +     N  AK  D V      K  NPS+
Sbjct: 33  VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91  TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
             + SIG    +N     ++ Y + V+  + R  F  S +RI + YGF G+D  W  P  
Sbjct: 89  RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRTKFAQSCVRIMKDYGFDGVDIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
           +  D F   L   E R      T  D + +   Q L I  A   +        L  I   
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
           L++I+ +T   A  +E V+ +     AAL+G  +G                         
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
            F+ + D  V +  +  G+ + K+VM +PFYG A+  V   + G  ++ + P        
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
                         D  + +Y++++  ++  YG   Q ++N   +  Y   +   ++  +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           DD E+ + K  Y K+++L G   W +  D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411

>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37  VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
           VS I+       TH+  S  DINS    L  +     N  AK  D V      K  NPS+
Sbjct: 33  VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91  TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
             + SIG    +N     ++ Y + V+  + R  F  S +RI + YGF G+D  W  P  
Sbjct: 89  RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWQYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
           +  D F   L   E R      T  D + +   Q L I  A   +        L  I   
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
           L++I+ +T   A  +E V+ +     AAL+G  +G                         
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
            F+ + D  V +  +  G+ + K+VM +PFYG A+  V   + G  ++ + P        
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
                         D  + +Y++++  ++  YG   Q ++N   +  Y   +   ++  +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           DD E+ + K  Y K+++L G   W +  D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411

>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37  VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
           VS I+       TH+  S  DINS    L  +     N  AK  D V      K  NPS+
Sbjct: 33  VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91  TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
             + SIG    +N     ++ Y + V+  + R  F  S +RI + YGF G+D  W  P  
Sbjct: 89  RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
           +  D F   L   E R      T  D + +   Q L I  A   +        L  I   
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
           L++I+ +T   A  +E V+ +     AAL+G  +G                         
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
            F+ + D  V +  +  G+ + K+VM +PFYG A+  V   + G  ++ + P        
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
                         D  + +Y++++  ++  YG   Q ++N   +  Y   +   ++  +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           DD E+ + K  Y K+++L G   W +  D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411

>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37  VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
           VS I+       TH+  S  DINS    L  +     N  AK  D V      K  NPS+
Sbjct: 33  VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91  TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
             + SIG    +N     ++ Y + V+  + R  F  S +RI + YGF G+D  W  P  
Sbjct: 89  RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
           +  D F   L   E R      T  D + +   Q L I  A   +        L  I   
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
           L++I+ +T   A  +E V+ +     AAL+G  +G                         
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
            F+ + D  V +  +  G+ + K+VM +PFYG A+  V   + G  ++ + P        
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
                         D  + +Y++++  ++  YG   Q ++N   +  Y   +   ++  +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           DD E+ + K  Y K+++L G   W +  D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411

>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37  VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
           VS I+       TH+  S  DINS    L  +     N  AK  D V      K  NPS+
Sbjct: 32  VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 87
Query: 91  TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
             + SIG    +N     ++ Y + V+  + R  F  S +RI + YGF G+D  W  P  
Sbjct: 88  RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWEYPQA 147
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
           +  D F   L   E R      T  D + +   Q L I  A   +        L  I   
Sbjct: 148 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 204
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
           L++I+ +T   A  +E V+ +     AAL+G  +G                         
Sbjct: 205 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 260
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
            F+ + D  V +  +  G+ + K+VM +PFYG A+  V   + G  ++ + P        
Sbjct: 261 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 320
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
                         D  + +Y++++  ++  YG   Q ++N   +  Y   +   ++  +
Sbjct: 321 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 378
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           DD E+ + K  Y K+++L G   W +  D+ +
Sbjct: 379 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 410

>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 136/333 (40%), Gaps = 62/333 (18%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K++NP +  I SIG G   +   Y  +  +  +R +F+ S  +  + + F  G+D  W 
Sbjct: 238 LKQRNPDLKIIPSIG-GWTLSDPFYDFV--DKKNRDTFVASVKKFLKTWKFYDGVDIDWM 294
Query: 142 APNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN 191
            P          D  N G     L  E R+   +L+A+  T +   L       Y    +
Sbjct: 295 FPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKIED 352
Query: 192 SYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR-------------- 237
               +++Q  +++I A+T  +Y   + N      ALY    G F R              
Sbjct: 353 VDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDENGE 407
Query: 238 -------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAAAA-- 282
                  + D  ++  + +G+ A+KLV+    YG  W      TL  P D   G A    
Sbjct: 408 PYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKL 467
Query: 283 ----GPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFGFD 331
                  +++ G++ YK IK+ +     T     +  Y++  E  +    STG +   FD
Sbjct: 468 KGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-ITFD 526
Query: 332 DVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
           D  +V AK  YAK   L G ++W++  D+ D L
Sbjct: 527 DHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559

>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 136/333 (40%), Gaps = 62/333 (18%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
           +K++NP +  I SIG G   +   Y  +  +  +R +F+ S  +  + + F  G+D  W 
Sbjct: 238 LKQRNPDLKIIPSIG-GWTLSDPFYDFV--DKKNRDTFVASVKKFLKTWKFYDGVDIDWE 294
Query: 142 APNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN 191
            P          D  N G     L  E R+   +L+A+  T +   L       Y    +
Sbjct: 295 FPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKIED 352
Query: 192 SYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR-------------- 237
               +++Q  +++I A+T  +Y   + N      ALY    G F R              
Sbjct: 353 VDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDENGE 407
Query: 238 -------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAAAA-- 282
                  + D  ++  + +G+ A+KLV+    YG  W      TL  P D   G A    
Sbjct: 408 PYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKL 467
Query: 283 ----GPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFGFD 331
                  +++ G++ YK IK+ +     T     +  Y++  E  +    STG +   FD
Sbjct: 468 KGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-ITFD 526
Query: 332 DVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
           D  +V AK  YAK   L G ++W++  D+ D L
Sbjct: 527 DHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559

>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37  VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
           VS I+       TH+  S  DINS    L  +     N  AK  D V      K  NPS+
Sbjct: 33  VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91  TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
             + SIG    +N     ++ Y + V+  + R  F  S +RI + YGF G++  W  P  
Sbjct: 89  RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
           +  D F   L   E R      T  D + +   Q L I  A   +        L  I   
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
           L++I+ +T   A  +E V+ +     AAL+G  +G                         
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
            F+ + D  V +  +  G+ + K+VM +PFYG A+  V   + G  ++ + P        
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
                         D  + +Y++++  ++  YG   Q ++N   +  Y   +   ++  +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           DD E+ + K  Y K+++L G   W +  D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
           SL   E      ++++KLG G YG VY+GV     +    K  K  T   EEF  E  + 
Sbjct: 2   SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
            +++H NL+++LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 62  KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 106

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 315

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           ++ +LGEG +G V+      +LP  +  ++AVK L + S    ++F+ E  L   LQH +
Sbjct: 16  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++R  G C +    ++++EYM +  L+ +L
Sbjct: 76  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 105

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           ++ +LGEG +G V+      +LP  +  ++AVK L + S    ++F+ E  L   LQH +
Sbjct: 22  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++R  G C +    ++++EYM +  L+ +L
Sbjct: 82  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 111

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
           SL   E      ++++KLG G YG VY+GV     +    K  K  T   EEF  E  + 
Sbjct: 2   SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
            +++H NL+++LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 62  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 106

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
           ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++L
Sbjct: 21  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           G C       +I E+M   +L  YL   + Q+ 
Sbjct: 81  GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 113

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           ++ +LGEG +G V+      +LP  +  ++AVK L + S    ++F+ E  L   LQH +
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++R  G C +    ++++EYM +  L+ +L
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 261 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 320
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 354

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 75  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 108

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
           ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++L
Sbjct: 21  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           G C       +I E+M   +L  YL   + Q+ 
Sbjct: 81  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 20  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
           ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++L
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           G C       +I E+M   +L  YL   + Q+ 
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 16  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 76  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 109

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 75  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 108

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
           ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++L
Sbjct: 20  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           G C       +I E+M   +L  YL   + Q+ 
Sbjct: 80  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 112

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
           ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++L
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           G C       +I E+M   +L  YL   + Q+ 
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 20  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 17  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
           ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++L
Sbjct: 29  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           G C       +I E+M   +L  YL   + Q+ 
Sbjct: 89  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 121

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 20  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 16  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 76  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 109

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 17  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 17  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
            ++++KLG G YG VY+GV     +    K  K  T   EEF  E  +  +++H NL+++
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
           LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 21  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 81  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 109

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 22  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 82  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 110

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 17  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 77  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 105

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 15  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 75  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 103

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 23  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 83  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 111

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 20  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 80  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 108

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
           SL   E      ++++KLG G +G VY+GV     +    K  K  T   EEF  E  + 
Sbjct: 2   SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
            +++H NL+++LG C       +I E+M   +L  YL   + Q+ 
Sbjct: 62  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 106

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 14  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 74  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 102

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
             G C  +  R   LI EY+P  SL  YL
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVYKGVL--PCGE----VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           ++ +LGEG +G V+       C E    ++AVK L   S    ++F  E  L   LQH +
Sbjct: 17  LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +++  G C++ +  ++++EYM +  L+ +L
Sbjct: 77  IVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE +    A+K L++T+  +   EF +E ++ A + H +L+R+
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
           LG C+ S    L+ + MP+  L  Y+
Sbjct: 83  LGVCL-SPTIQLVTQLMPHGCLLEYV 107

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE +    A+K L++T+  +   EF +E ++ A + H +L+R+
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
           LG C+ S    L+ + MP+  L  Y+
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYV 130

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 471 KLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           +LG+G +G V    Y  +    GEV+AVKKL  ++ +   +F+ E+ +   LQH N+++ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 526 LGFCIDSEER--MLIYEYMPNKSLDCYL 551
            G C  +  R   LI E++P  SL  YL
Sbjct: 80  KGVCYSAGRRNLKLIMEFLPYGSLREYL 107

>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B From Arthrobacter Tad20 Length = 435

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 124/317 (39%), Gaps = 59/317 (18%)
Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSI------RIARLYG---- 132
           +K KNP +  ++S+G    T    +S      + R+  + S I       +    G    
Sbjct: 111 LKAKNPKLKVMISLGGW--TWSKNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGA 168
Query: 133 ------FRGLDFAWTAPNTST-----------DMFNIGLLFDEWRIAATKLDAKNSTRQQ 175
                 F G+D  W  P T++           D  N   L  E+R    +LDA  ST  +
Sbjct: 169 GAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFR---KQLDAYGSTNNK 225
Query: 176 SLLILTARFRYSP----------PAN--SYLLNSIQR-NLNWIHAVTASYYEPVSTNFTA 222
              +L+A    +P          PAN  S    SIQ  +L+     T + ++    +  A
Sbjct: 226 KY-VLSAFLPANPADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPA 284
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
            P A     S +F  S D+ +K ++  G+   +L + L  YG  WT  K       A   
Sbjct: 285 DPRA----PSKKF--SADKAVKKYLAAGIDPKQLGLGLAAYGRGWTGAKNVSPWGPATDG 338
Query: 283 GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAY 342
            P  Y++    Y K    +KT G D    Y++     +   GT W+ +D++   + K  Y
Sbjct: 339 APGTYETANEDYDK----LKTLGTD---HYDAATGSAWRYDGTQWWSYDNIATTKQKTDY 391
Query: 343 AKEKRLLGYYAWQVSFD 359
              K L G   W++S D
Sbjct: 392 IVSKGLGGGMWWELSGD 408

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVL--PC-GE---VIAVKKLSKTSTQGF-EEFK 508
           L +I  +  RF    +LGE  +G VYKG L  P  GE    +A+K L   +     EEF+
Sbjct: 20  LKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +E ML A+LQH N++ +LG     +   +I+ Y  +  L  +L
Sbjct: 78  HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVL--PC-GE---VIAVKKLSKTSTQGF-EEFK 508
           L +I  +  RF    +LGE  +G VYKG L  P  GE    +A+K L   +     EEF+
Sbjct: 3   LKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +E ML A+LQH N++ +LG     +   +I+ Y  +  L  +L
Sbjct: 61  HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
           P  R+ +LAD E   E+     ++G+GG+G V+KG L   + V+A+K L    ++G    
Sbjct: 9   PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSH 556
              F+EF+ EV + + L H N++++ G  + +  RM++ E++P   L   L   +H
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH 117

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
           P  R+ +LAD E   E+     ++G+GG+G V+KG L   + V+A+K L    ++G    
Sbjct: 9   PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSH 556
              F+EF+ EV + + L H N++++ G  + +  RM++ E++P   L   L   +H
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH 117

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
           P  R+ +LAD E   E+     ++G+GG+G V+KG L   + V+A+K L    ++G    
Sbjct: 9   PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSH 556
              F+EF+ EV + + L H N++++ G  + +  RM++ E++P   L   L   +H
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH 117

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVYKG----VLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           ++ +LGEG +G V+      + P  +  ++AVK L   +    ++F+ E  L   LQH +
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +++  G C D +  ++++EYM +  L+ +L
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +KL H N++R +G  + S  R ++ E M    L  +L
Sbjct: 81  FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +KL H N++R +G  + S  R ++ E M    L  +L
Sbjct: 95  FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 413 KYNQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNL-RVYSLADI-EAATERFSIRN 470
           K+ +++ + + E  S +   ++    T   D+N N     +  S++D+ E   +  ++  
Sbjct: 5   KHQELQAMQM-ELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIR 63
Query: 471 KLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
            LG G +G VY+G +      P    +AVK L +  ++  E +F  E ++ +K  H N++
Sbjct: 64  GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           R +G  + S  R ++ E M    L  +L
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFL 151

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 27  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 87  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 131

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 81  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 81  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 12  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 72  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 116

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 61  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 38  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 98  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 142

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 37  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 97  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 141

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 95  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 139

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 80  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 472 LGEGGYGPVYK----GVLPCGE--VIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIR 524
           +GEG +G V++    G+LP     ++AVK L + ++   + +F+ E  L A+  + N+++
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFGLS 555
           +LG C   +   L++EYM    L+ +L  +S
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS 145

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  ++  E +
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 80  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 124

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
              F  E  +  +  H N+IR+ G    S+  M++ EYM N SLD +L     Q T   L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
              F  E  +  +  H N+IR+ G    S+  M++ EYM N SLD +L     Q T   L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
              F  E  +  +  H N+IR+ G    S+  M++ EYM N SLD +L     Q T   L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
              F  E  +  +  H N+IR+ G    S+  M++ EYM N SLD +L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
              F  E  +  +  H N+IR+ G    S+  M++ EYM N SLD +L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 29  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
              F  E  +  +  H N+IR+ G    S+  M++ EYM N SLD +L     Q T   L
Sbjct: 88  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 147

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
              F  E  +  +  H N+IR+ G    S+  M++ EYM N SLD +L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
              F  E  +  +  H N+IR+ G    S+  M++ EYM N SLD +L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKT-STQGFEE 506
           S++D+ E   +  ++   LG G +G VY+G +      P    +AVK L +  S Q   +
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           F  E ++ +K  H N++R +G  + S  R ++ E M    L  +L
Sbjct: 95  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           +IEA+    S R  +G G +G VYKG       + + K+   + + F+ F+NEV +  K 
Sbjct: 32  EIEASEVMLSTR--IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 90  RHVNILLFMGY 100

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
            SI   +G G +G V  G L       +    KT   G+ E     F  E  +  +  H 
Sbjct: 18  ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
           N+IR+ G    S+  M++ EYM N SLD +L     Q T   L
Sbjct: 78  NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 120

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL-----SKTSTQGFEEFKN 509
           LA I   TE   ++  LG G +G V+KGV +P GE I +         K+  Q F+   +
Sbjct: 6   LARIFKETELRKLKV-LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 64
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
            ++    L H +++R+LG C  S  + L+ +Y+P  SL      L H + + G
Sbjct: 65  HMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL------LDHVRQHRG 110

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
            SI   +G G +G V  G L       +    KT   G+ E     F  E  +  +  H 
Sbjct: 35  ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
           N+IR+ G    S+  M++ EYM N SLD +L     Q T   L
Sbjct: 95  NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 137

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL-----SKTSTQGFEEFKN 509
           LA I   TE   ++  LG G +G V+KGV +P GE I +         K+  Q F+   +
Sbjct: 24  LARIFKETELRKLK-VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 82
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
            ++    L H +++R+LG C  S  + L+ +Y+P  SL      L H + + G
Sbjct: 83  HMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL------LDHVRQHRG 128

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 449 PNLRVYSLA-DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE- 506
           PN  V+  A +IEA+    +I   +G G +G V  G L       +    KT   G+ E 
Sbjct: 8   PNQAVHEFAKEIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK 65
Query: 507 ----FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
               F  E  +  +  H N+I + G    S+  M++ EYM N SLD +L
Sbjct: 66  QRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL 114

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 472 LGEGGYGPVYKGVLPCG----EV-IAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIRV 525
           +G G +G VYKG+L       EV +A+K L    T+    +F  E  +  +  H N+IR+
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
            G     +  M+I EYM N +LD +L
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL 137

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQ-G 503
           PN  V   A  E       I   +G G +G V +G L         +A+K L    T+  
Sbjct: 2   PNEAVREFAK-EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             EF +E  +  + +H N+IR+ G   +S   M++ E+M N +LD +L
Sbjct: 61  RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL 108

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
           D NR     R  S  D E    + ++  ++G G +G VYKG       + +  ++  + Q
Sbjct: 14  DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 73
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGF 528
             + FKNEV +  K +HVN++  +G+
Sbjct: 74  QLQAFKNEVGVLRKTRHVNILLFMGY 99

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
           D NR     R  S  D E    + ++  ++G G +G VYKG       + +  ++  + Q
Sbjct: 15  DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 74
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGF 528
             + FKNEV +  K +HVN++  +G+
Sbjct: 75  QLQAFKNEVGVLRKTRHVNILLFMGY 100

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
           D NR     R  S  D E    + ++  ++G G +G VYKG       + +  ++  + Q
Sbjct: 7   DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 66
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGF 528
             + FKNEV +  K +HVN++  +G+
Sbjct: 67  QLQAFKNEVGVLRKTRHVNILLFMGY 92

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
           D NR     R  S  D E    + ++  ++G G +G VYKG       + +  ++  + Q
Sbjct: 15  DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 74
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGF 528
             + FKNEV +  K +HVN++  +G+
Sbjct: 75  QLQAFKNEVGVLRKTRHVNILLFMGY 100

>pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 118/317 (37%), Gaps = 32/317 (10%)
Query: 82  TVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT 141
            ++K+NP +  +LS+G      +S        +  R  FI S+ +I + YG  G+D  W 
Sbjct: 100 ALRKQNPDLKVLLSVGGWGARGFS---GAAATAESRAVFIRSAQKIIQQYGLDGIDLDWE 156
Query: 142 APNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
            P             D     A     + +  +Q L+ +        P +   + ++   
Sbjct: 157 FPVNGAWGLVASQPADRDNFTALLKSLREAVGEQKLVTIAVGANAESPKSWVDVKAVAPV 216
Query: 202 LNWIHAVTASY-YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCL 260
           LN+I+  T    Y     N     ++ + +++     S D V+  ++  GL   +  + +
Sbjct: 217 LNYINLXTYDXAYGTQYFNSNLYDSSHWPTVAAADKYSADFVVNNYLAAGLKPSQXNLGI 276
Query: 261 PFYGYA----------WTLVKPEDNGIGAAAAGP---AL-----YDSGLVTYKKIKNHIK 302
            FYG            WT    ++N +     GP   AL     YD    TY K  + + 
Sbjct: 277 GFYGRVPKRAVEPGIDWTKADAQNNPVTQPYFGPQQIALFASLGYDLSKDTYVKYNDIVG 336
Query: 303 TYGPDVQVMYNSTYE----VNYFST----GTVWFG--FDDVEAVRAKIAYAKEKRLLGYY 352
               D Q  +   ++    V + S     G   F   +++  +V  K  Y K K L G  
Sbjct: 337 KLLNDPQKRFTEHWDDEAKVPWLSVQSAEGKPLFALSYENPRSVAIKADYIKAKGLAGAX 396
Query: 353 AWQVSFDDHDWLLSQAA 369
            W+   DD + L  Q A
Sbjct: 397 FWEYGADDQNQLARQLA 413

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 468 IRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNL 522
           I   +G G +G V +G L         +A+K L    T+    EF +E  +  + +H N+
Sbjct: 18  IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           IR+ G   +S   M++ E+M N +LD +L
Sbjct: 78  IRLEGVVTNSMPVMILTEFMENGALDSFL 106

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 472 LGEGGYGPVYKGVLPCGE----VIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LGEG +G V +G L   +     +AVK  KL  +S +  EEF +E        H N+IR+
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 526 LGFCIDSEER-----MLIYEYMPNKSLDCYLF 552
           LG CI+   +     M+I  +M    L  YL 
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL 133

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  DS    LI EY P
Sbjct: 66  RHPNILRLYGYFHDSTRVYLILEYAP 91

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 7   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 67  RHVNILLFMGY 77

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 4   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 64  RHVNILLFMGY 74

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 7   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 67  RHVNILLFMGY 77

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 62  RHVNILLFMGY 72

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 62  RHVNILLFMGY 72

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 6   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 65
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 66  RHVNILLFMGY 76

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 62  RHVNILLFMGY 72

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
           + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
           H N++++L       +  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
           + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
           H N++++L       +  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 18  DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 78  RHVNILLFMGY 88

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
           + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
           H N++++L       +  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 18  DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 518 QHVNLIRVLGF 528
           +HVN++  +G+
Sbjct: 78  RHVNILLFMGY 88

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
           + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
           H N++++L       +  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
           + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
           H N++++L       +  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 4   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 64  NHPNIVKLLDVIHTENKLYLVFEFL 88

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL 84

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFL 88

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           +H N++R+ G+  D+    LI EY P   +   L  LS     F  ++T +Y
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATY 118

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
              F  E  +  +  H N+IR+ G    S+  M++ E M N SLD +L     Q T   L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL 84

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL 84

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFL 91

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFL 85

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           +H N++R+ G+  D+    LI EY P   +   L  LS     F  ++T +Y
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATY 118

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
           P   V+  A    AT   SI   +G G +G V  G L       +    KT   G+ E  
Sbjct: 31  PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
              F  E  +  +  H N+IR+ G    S+  M++ E M N SLD +L     Q T   L
Sbjct: 90  RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
             E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L 
Sbjct: 1   GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
           H N++++L       +  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  +LG G +G V+ G       +AVK L K  T   + F  E  L   LQH
Sbjct: 9   EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             L+R+       E   +I EYM   SL  +L
Sbjct: 68  DKLVRLYAVVTREEPIYIITEYMAKGSLLDFL 99

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFL 91

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 321
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 322 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 354

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP 92

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
            ++G G +G V+ G     + +A+K + +      E+F  E  +  KL H  L+++ G C
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
           ++     L++E+M +  L  YL    GL   +T  G           LE+ C  H
Sbjct: 75  LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKLQH 519
           E F I   LG+G +G VY       + ++A+K L KT  +  G E + + EV + + L+H
Sbjct: 12  EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 520 VNLIRVLGFCIDSEERMLIYEYMP 543
            N++R+ G+  D+    LI EY P
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAP 95

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKLQH 519
           E F I   LG+G +G VY       + ++A+K L KT  +  G E + + EV + + L+H
Sbjct: 12  EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 520 VNLIRVLGFCIDSEERMLIYEYMP 543
            N++R+ G+  D+    LI EY P
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAP 95

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
            ++G G +G V+ G     + +A+K + +      E+F  E  +  KL H  L+++ G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFGL 563
           ++     L++E+M +  L  YL    GL   +T  G+
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 108

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG G +G V+ G       +AVK L K  T   + F  E  L   LQH
Sbjct: 8   EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             L+R+       E   +I E+M   SL  +L
Sbjct: 67  DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFL 98

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP 91

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 271

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
            ++G G +G V+ G     + +A+K + +      E+F  E  +  KL H  L+++ G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
           ++     L++E+M +  L  YL    GL   +T  G           LE+ C  H
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 126

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP 96

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAP 93

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP 91

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 271

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEV 511
           L   + A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV
Sbjct: 3   LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP 543
            + + L+H N++R+ G+  D+    LI EY P
Sbjct: 63  EIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
            SI   +G G +G V  G L       +    KT   G+ E     F  E  +  +  H 
Sbjct: 18  ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
           N+IR+ G    S+  M++ E M N SLD +L     Q T   L
Sbjct: 78  NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 120

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP 96

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
            ++G G +G V+ G     + +A+K + +      E+F  E  +  KL H  L+++ G C
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
           ++     L++E+M +  L  YL    GL   +T  G           LE+ C  H
Sbjct: 70  LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP 92

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP 94

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 5   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 65  RHPNILRLYGYFHDATRVYLILEYAP 90

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP 92

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP 94

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP 91

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAP 93

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP 94

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP 96

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP 94

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 84  LGICLTSTVQ-LIMQLMP 100

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
            + E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
            H N++++L       +  L++E++
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEHV 87

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 87  LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 119

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 84  LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 116

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 85  LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 117

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP 91

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 23  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 83  RHPNILRLYGYFHDATRVYLILEYAP 108

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 87  LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 119

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP 94

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP 91

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP 91

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 83  LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 115

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP 91

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 10  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAP 95

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 85  LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 117

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+   T T+G       E+ L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
           N++++L       +  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEHV 83

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 86  LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 118

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAP 117

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 85  LGICLTSTVQ-LIMQLMP 101

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
            ++G G +G V+ G     + +A+K + K  +   ++F  E  +  KL H  L+++ G C
Sbjct: 33  QEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
           ++     L++E+M +  L  YL    GL   +T  G           LE+ C  H
Sbjct: 92  LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 146

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKL--SKTSTQGFE-EFKNEVMLTAKLQHVN 521
           F I   LG+G +G VY         ++A+K L  S+   +G E + + E+ + A L H N
Sbjct: 25  FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           ++R+  +  D     LI EY P   L            Y  L+K+C++
Sbjct: 85  ILRLYNYFYDRRRIYLILEYAPRGEL------------YKELQKSCTF 120

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVGEYMSKGSLLDFLKG 271

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAP 117

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 33  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 93  LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 125

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 29  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 89  LGICLTSTVQ-LITQLMP 105

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 83  LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 115

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL---SKTSTQGFEEFKNEVMLTAKLQHV 520
           ++ +  KLG+G YG V+K +    GEV+AVKK+    + ST     F+  ++LT    H 
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 521 NLIRVLGFCIDSEER--MLIYEYM 542
           N++ +L       +R   L+++YM
Sbjct: 70  NIVNLLNVLRADNDRDVYLVFDYM 93

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 83  LGICLTSTVQ-LITQLMP 99

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 85  LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 117

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
           A E F I   LG+G +G VY       + ++A+K L K   +  G E + + EV + + L
Sbjct: 3   ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
           +H N++R+ G+  D+    LI EY P
Sbjct: 63  RHPNILRLYGYFHDATRVYLILEYAP 88

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 73  EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKG 105

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 17  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 77  LGICLTSTVQ-LITQLMP 93

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
           VY   + E A E+ ++  +LG+G +G VY+GV   G V       +A+K +++  S +  
Sbjct: 36  VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 94
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
            EF NE  +  +    +++R+LG     +  ++I E M    L  YL  L  +
Sbjct: 95  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 147

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 73  EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKG 105

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 86  LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 118

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 90  LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 122

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 83  LGICLTSTVQ-LITQLMP 99

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 48  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 108 LGICLTSTVQ-LITQLMP 124

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
           VY   + E A E+ ++  +LG+G +G VY+GV   G V       +A+K +++  S +  
Sbjct: 8   VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 66
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
            EF NE  +  +    +++R+LG     +  ++I E M    L  YL  L  +
Sbjct: 67  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
           VY   + E A E+ ++  +LG+G +G VY+GV   G V       +A+K +++ ++    
Sbjct: 4   VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 62
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
            EF NE  +  +    +++R+LG     +  ++I E M    L  YL  L
Sbjct: 63  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 112

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
           VY   + E A E+ ++  +LG+G +G VY+GV   G V       +A+K +++  S +  
Sbjct: 7   VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 65
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
            EF NE  +  +    +++R+LG     +  ++I E M    L  YL  L  +
Sbjct: 66  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 86  LGICLTSTVQ-LITQLMP 102

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 86  LGICLTSTVQ-LITQLMP 102

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
           LG C+ S  + LI + MP     C L  +   K   G
Sbjct: 90  LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 122

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 85  LGICLTSTVQ-LITQLMP 101

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
           LG G +G VYKG+ +P GE     +A+K+L + TS +  +E  +E  + A + + ++ R+
Sbjct: 20  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 526 LGFCIDSEERMLIYEYMP 543
           LG C+ S  + LI + MP
Sbjct: 80  LGICLTSTVQ-LITQLMP 96

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
           VY   + E A E+ ++  +LG+G +G VY+GV   G V       +A+K +++  S +  
Sbjct: 7   VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 65
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
            EF NE  +  +    +++R+LG     +  ++I E M    L  YL  L  +
Sbjct: 66  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 73  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 105

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
           VY   + E A E+ ++  +LG+G +G VY+GV   G V       +A+K +++ ++    
Sbjct: 8   VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 66
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
            EF NE  +  +    +++R+LG     +  ++I E M    L  YL  L  +
Sbjct: 67  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
           VY   + E A E+ ++  +LG+G +G VY+GV   G V       +A+K +++ ++    
Sbjct: 14  VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 72
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
            EF NE  +  +    +++R+LG     +  ++I E M    L  YL  L
Sbjct: 73  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 122

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 73  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 105

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
           E   E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H
Sbjct: 7   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 65
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
             L+++  + + SEE + ++ EYM   SL  +L G
Sbjct: 66  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 98

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
           VY   + E A E+ ++  +LG+G +G VY+GV   G V       +A+K +++  S +  
Sbjct: 14  VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 72
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
            EF NE  +  +    +++R+LG     +  ++I E M    L  YL  L  +
Sbjct: 73  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 125

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	570
3aqu_A	356	AT4G19810; stress response, TIM barrel, hydrolase,	2e-84
3alf_A	353	Chitinase, class V; hydrolase; 1.20A {Nicotiana ta	1e-83
4ay1_A	365	Chitinase-3-like protein 2; chilectin, lectin, chi	5e-68
3fy1_A	395	Amcase, TSA1902, acidic mammalian chitinase; struc	5e-66
1vf8_A	377	YM1, secretory protein; chitinase, CHI-lectin, str	9e-66
1wb0_A	445	Chitinase 1, chitotriosidase 1; cyclopentapeptide	6e-63
2pi6_A	361	Chitinase-3-like protein 1; complex, signaling pro	2e-60
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-47
1jnd_A	420	Imaginal DISC growth factor-2; IDGF, chitinase, in	1e-45
1w9p_A	433	Chitinase; peptide inhibitors, argifin, argadin, g	5e-44
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-44
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	7e-44
1ll7_A	392	Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {	1e-42
3g6m_A	406	Chitinase, crchi1; inhibitor, caffeine, glycosidas	2e-42
1itx_A	419	Chitinase A1, glycosyl hydrolase; alpha-beta (TIM)	3e-42
3qok_A	420	Putative chitinase II; structural genomics, PSI-bi	4e-40
1edq_A	540	Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1	2e-39
1kfw_A	435	Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob	3e-39
3fnd_A	312	Chitinase; TIM-barrel, structural genomics, PSI-2,	1e-38
1goi_A	499	Chitinase B; chitin degradation, hydrolase, glycos	1e-38
3oa5_A	574	CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers	4e-37
3cz8_A	319	Putative sporulation-specific glycosylase YDHD; st	1e-33
3arx_A	584	Chitinase A; TIM barrel, inhibitor complex, glycos	2e-31
3bxw_B	393	Chitinase domain-containing protein 1; TIM barrel,	4e-27
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-27
3sim_A	275	Protein, family 18 chitinase; family 18 plant chit	4e-26
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-23
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-18
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-17
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-16
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-16
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-16
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-16
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-16
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-16
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-16
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-16
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-15
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-15
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-15
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-15
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-15
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-15
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-15
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-15
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-15
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-15
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	7e-15
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-14
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-14
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-14
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-14
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-14
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-14
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-14
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-14
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	5e-14
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-14
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-14
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-14
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-14
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-13
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-13
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-13
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-13
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-13
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-13
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-13
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-13
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	6e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-12
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-12
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-12
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-12
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-12
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-12
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-12
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-11
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-11
1edt_A	271	Endo-beta-N-acetylglucosaminidase H, endo H; hydro	9e-11
3n12_A	333	Chitinase A, chinctu2; zinc atoms, complex, hydrol	3e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-10
2y8v_A	290	CHIC, class III chitinase, putative; afchic, hydro	9e-10
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-09
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-08
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-08
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-08
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-08
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	9e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-07
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-07
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-07
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-07
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-07
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-06
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-06
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	6e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-06
1nar_A	290	Narbonin; plant SEED protein; 1.80A {Vicia narbone	7e-06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-06
2ebn_A	289	Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl	8e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	9e-06
3ebv_A	302	Chinitase A; chitinase A, CHIA, glycosidase, struc	1e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-05
3ian_A	321	Chitinase; structural genomics, hydrolase, glycosi	2e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-05
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	9e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	8e-04
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	9e-04

>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356

 Score =  266 bits (681), Expect = 2e-84
 Identities = 132/358 (36%), Positives = 208/358 (58%), Gaps = 12/358 (3%)

Query: 24  KPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV 83
           +  ++  Y   +    ++ I+  LFTHL C+ AD+NS T Q+++S  +++ + + F  TV
Sbjct: 2   QTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVS-SANQPKFSTFTQTV 60

Query: 84  KKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP 143
           +++NPS+ T+LSIG G   + + Y+SM  N + RKSFIDSSIR+AR YGF GLD  W  P
Sbjct: 61  QRRNPSVKTLLSIG-GGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 119

Query: 144 NTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP--ANSYLLNSIQRN 201
           +++T+M N G L  EWR A   + A+ S+  +  L+L A   YS    +  Y ++++  +
Sbjct: 120 SSATEMTNFGTLLREWRSA---VVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASS 176

Query: 202 LNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLP 261
           L+W++ +   +Y P  +  T PPAAL+   +     S D   ++WI+ GL A K V+  P
Sbjct: 177 LDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGFP 234

Query: 262 FYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYF 321
           +YGYAW L     +   A   G A+   G + Y +I+  I   G     +YNST   +Y 
Sbjct: 235 YYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYC 292

Query: 322 STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSAS 379
             GT W G+DD +++  K+ YAK++ LLGY++W V  DD +  LS+AA+Q    T+A+
Sbjct: 293 YAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADD-NSGLSRAASQAWDATTAT 349

>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353

 Score =  264 bits (676), Expect = 1e-83
 Identities = 131/349 (37%), Positives = 194/349 (55%), Gaps = 16/349 (4%)

Query: 27  IRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
           ++ GY        ++ I+  LFTHL C+ AD+N    QL +S P +++   +F  TV++K
Sbjct: 4   VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRK 62

Query: 87  NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS 146
           NPS+ T LSI  G   N + Y  M R  + RKSFIDSSIR+AR  GF GLD  W  P ++
Sbjct: 63  NPSVKTFLSIA-GGRANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSA 121

Query: 147 TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN--SYLLNSIQRNLNW 204
            DM N+G L +EWR A   ++ +     ++ L+LTA    SP  N  +Y + S+ RNL+W
Sbjct: 122 ADMTNLGTLLNEWRTA---INTEARNSGRAALLLTAAVSNSPRVNGLNYPVESLARNLDW 178

Query: 205 IHAVTASYYEPV-STNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFY 263
           I+ +   +Y P  S + T   A L+         S    + AWI+ G+   KLV+ +PFY
Sbjct: 179 INLMAYDFYGPNWSPSQTNSHAQLFDP-VNHV--SGSDGINAWIQAGVPTKKLVLGIPFY 235

Query: 264 GYAWTLVKPEDNGIGAAAAGPAL---YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY 320
           GYAW LV    +G+ A AAG +     D G +TY +I+++I         +YN+T   +Y
Sbjct: 236 GYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESR--ATTVYNATIVGDY 293

Query: 321 FSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAA 369
             +G+ W  +DD + VR K+ Y K + LLGY+AW V+ D +  L   A+
Sbjct: 294 CYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTAS 342

>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365

 Score =  223 bits (570), Expect = 5e-68
 Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 26/355 (7%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
           T   I+  L +HLI S A I +    +       E  + +  +++K KNP +  +LSIG 
Sbjct: 22  TPENIDPFLCSHLIYSFASIENNKVIIK---DKSEVMLYQTINSLKTKNPKLKILLSIG- 77

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDE 158
           G       +  MV +S+ R  FI+S I   R + F GLD +W  P    +  +  +L  E
Sbjct: 78  GYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYP-DQKENTHFTVLIHE 136

Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEP- 215
              A        +   +  L+LTA          NSY +  + ++L++I+ ++  ++   
Sbjct: 137 LAEA---FQKDFTKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSW 193

Query: 216 VSTNFTAPPAALYGSISGRFAR---STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKP 272
                T   + L      R      + +  +  WI +G+ ++K+VM +P YG+++TL   
Sbjct: 194 EKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLASA 253

Query: 273 EDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVW 327
            +  +GA A+GP         SG + Y +I   +K       +      +V Y   G  W
Sbjct: 254 -ETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGAK----ITRLQDQQVPYAVKGNQW 308

Query: 328 FGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVDK 382
            G+DDV+++  K+ + K   L G   W +  DD              +  A    
Sbjct: 309 VGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKS--CNQGPYPLVQAVKRS 361

>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395

 Score =  219 bits (559), Expect = 5e-66
 Identities = 87/358 (24%), Positives = 151/358 (42%), Gaps = 27/358 (7%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
               IN  L THLI + A + +        +  ++  + +  + +K KN  + T+L+IG 
Sbjct: 21  MPDDINPCLCTHLIYAFAGMQNNEITT---IEWNDVTLYQAFNGLKNKNSQLKTLLAIG- 76

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPN----TSTDMFNIGL 154
           G +   + +++MV    +R++FI S I+  R Y F GLDF W  P        D     +
Sbjct: 77  GWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTV 136

Query: 155 LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASY 212
           L  E R A    + +     +  L++TA          + Y +  + + L++IH +T   
Sbjct: 137 LVQEMREA---FEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDL 193

Query: 213 YEPVSTNFTAPPAALYGS---ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTL 269
           +      +T   + LY            + D V+  W + G  A+KL++  P YG+ + L
Sbjct: 194 HGSWE-GYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFIL 252

Query: 270 VKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTG 324
             P + GIGA  +G         +SG+  Y +I   +K         +++  EV Y   G
Sbjct: 253 SNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLK---NGATQGWDAPQEVPYAYQG 309

Query: 325 TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASVDK 382
            VW G+D+V++   K  + K  +  G   W +  DD     +     K  + S     
Sbjct: 310 NVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDLDDFTG--TFCNQGKFPLISTLKKA 365

>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377

 Score =  217 bits (556), Expect = 9e-66
 Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 25/336 (7%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
               I+  L THLI + A + +    ++ +   D          +K KN  + T+L+IG 
Sbjct: 21  KPGNIDPCLCTHLIYAFAGMQNNE--ITYTHEQDLRDYEALNG-LKDKNTELKTLLAIG- 76

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAW----TAPNTSTDMFNIGL 154
           G     + +S+MV    +R+ FI S IR  R Y F GL+  W    +  +   D     +
Sbjct: 77  GWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSV 136

Query: 155 LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASY 212
           L  E R A    + ++  +    L+LT+          + Y +  + ++L++I  +T   
Sbjct: 137 LVKEMRKA---FEEESVEKDIPRLLLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDL 193

Query: 213 YEPVSTNFTAPPAALYGS---ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTL 269
           ++P    +T   + LY S   I      + D ++  W + G +++KL++  P YG+ + L
Sbjct: 194 HDP-KDGYTGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPAYGHTFIL 252

Query: 270 VKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTG 324
             P   GIGA             +SGL+ Y ++   +         ++++  EV Y   G
Sbjct: 253 SDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLN---EGATEVWDAPQEVPYAYQG 309

Query: 325 TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
             W G+D+V + + K  + K+  L G   W +  DD
Sbjct: 310 NEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDD 345

>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445

 Score =  212 bits (542), Expect = 6e-63
 Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 33/339 (9%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
               ++  L THLI + A + +     +     ++  + +  + +KK NP + T+L+IG 
Sbjct: 21  LPKDLDPSLCTHLIYAFAGMTNHQLSTT---EWNDETLYQEFNGLKKMNPKLKTLLAIG- 76

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP----NTSTDMFNIGL 154
           G +     ++ MV  +++R++F++S+IR  R Y F GLD  W  P    + + D      
Sbjct: 77  GWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTT 136

Query: 155 LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL-----LNSIQRNLNWIHAVT 209
           L  +   A      +  T  +  L+L+A     P   +Y+     ++ I +NL++++ + 
Sbjct: 137 LVQDLANA---FQQEAQTSGKERLLLSA---AVPAGQTYVDAGYEVDKIAQNLDFVNLMA 190

Query: 210 ---ASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYA 266
                 +E V T   +P            + + D  ++ W+++G  A KL++ +P YG +
Sbjct: 191 YDFHGSWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRS 249

Query: 267 WTLVKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYF 321
           +TL    D  +GA A G         + G++ Y ++ +                 +V Y 
Sbjct: 250 FTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSW-----KGATKQRIQDQKVPYI 304

Query: 322 STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
                W GFDDVE+ + K++Y K+K L G   W +  DD
Sbjct: 305 FRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343

>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361

 Score =  203 bits (518), Expect = 2e-60
 Identities = 80/332 (24%), Positives = 140/332 (42%), Gaps = 26/332 (7%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
               I+  L TH+I + A+I++    +     +D          +K +NP + T+LS+G 
Sbjct: 21  FPDAIDPFLCTHVIYTFANISNNE--IDTWEWNDVTLYDTLNT-LKNRNPKLKTLLSVG- 76

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDE 158
           G +     +S +   +  R++FI S     R +GF GLD AW  P    D  ++  L  E
Sbjct: 77  GWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYP-GRRDKRHLTTLVKE 135

Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASY-YEP 215
            +        +     + LL L+A            Y +  I R+L++I  +T  Y +  
Sbjct: 136 MKAE---FIREAQAGTEQLL-LSAAVSAGKIAIDRGYDIAQISRHLDFISLLT--YDFHG 189

Query: 216 VSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPE 273
                    + L+       +R  + D  +   +  G  A+KLVM +P +G ++TL    
Sbjct: 190 AWRQTVGHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSFTLASS- 248

Query: 274 DNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWF 328
              +GA  +GP +      + G++ Y +I + +               +V Y + G  W 
Sbjct: 249 KTDVGAPVSGPGIPGRFTKEKGILAYYEICDFLHGAT----THRFRDQQVPYATKGNQWV 304

Query: 329 GFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
            +DD E+V+ K  Y K ++L G   W +  DD
Sbjct: 305 AYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  166 bits (423), Expect = 4e-47
 Identities = 45/110 (40%), Positives = 69/110 (62%), Gaps = 1/110 (0%)

Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFK 508
            L+ +SL +++ A++ FS +N LG GG+G VYKG L  G ++AVK+L +  TQG E +F+
Sbjct: 16  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQ 75

Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQK 558
            EV + +   H NL+R+ GFC+   ER+L+Y YM N S+   L      +
Sbjct: 76  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125

>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420

 Score =  165 bits (419), Expect = 1e-45
 Identities = 67/376 (17%), Positives = 132/376 (35%), Gaps = 61/376 (16%)

Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFAD--TVKKKNPSITTILSIGQGK 100
           I     +HL+   A +     Q      + +    +F++  ++K+K P +  +LS+G   
Sbjct: 28  IALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVTSLKRKYPHLKVLLSVGGDH 87

Query: 101 DTNY---SIYSSMVRNSSHRKS-FIDSSIRIARLYGFRGLDFAW-----------TAPNT 145
           D +    + Y  ++     R+  FI S+  + + YGF GLD A+                
Sbjct: 88  DIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVHGDLGL 147

Query: 146 STDMFNIGLLFDEWRIAATKLDAKNSTR---------QQSLLILT----ARFRYSPPANS 192
           +          D        L  +  T          +    +L+         +     
Sbjct: 148 AWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVNST---WY 204

Query: 193 YLLNSIQRNLNWIHAVT----ASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIE 248
           + + ++   +++++  T         P   +++AP     GS       + D  ++ W+ 
Sbjct: 205 FDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPIYHPDGSKDRLAHLNADFQVEYWLS 264

Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNG--------IGAAAAGPALYDSGLVTYKKIKNH 300
           +G  ++K+ + +  YG AW L K              G A  G      GL++Y +I   
Sbjct: 265 QGFPSNKINLGVATYGNAWKLTKDSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGK 324

Query: 301 IK--------------TYGPDVQVMYNSTYEV--NYFSTGTVWFGFDDVEAVRAKIAYAK 344
           +                   D    +        +   T  +W  +DD ++   K AYA+
Sbjct: 325 LSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYAR 384

Query: 345 EKRLLGYYAWQVSFDD 360
            K L G   + +S+DD
Sbjct: 385 VKNLGGVALFDLSYDD 400

>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433

 Score =  161 bits (409), Expect = 5e-44
 Identities = 68/347 (19%), Positives = 128/347 (36%), Gaps = 49/347 (14%)

Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV-----------------KK 85
           +  +  TH++ + A++   T ++ ++    + +     D+                  KK
Sbjct: 64  LPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLYLLKK 123

Query: 86  KNPSITTILSIGQGKDTNYS-IYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPN 144
           +N ++  +LSIG      YS  ++      + RK+F  +++++ +  GF GLD  W  P 
Sbjct: 124 QNRNLKVLLSIGGW---TYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPE 180

Query: 145 TSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLLNSIQ 199
                 +  LL  E R A     A N+  Q    +LT     + PA         L  + 
Sbjct: 181 NDQQANDFVLLLKEVRTALDSYSAANAGGQH--FLLTV----ASPAGPDKIKVLHLKDMD 234

Query: 200 RNLNWIHAVTASYYEPVSTNFTAPPAALYGS--ISGRFARSTDQVLKAWIERGLSADKLV 257
           + L++ + +   Y    S + +   A +Y           +T   L  +   G+ A+K+V
Sbjct: 235 QQLDFWNLMAYDYAGSFS-SLSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKIV 293

Query: 258 MCLPFYGYAWTLVKPEDNGIGAAAAGPALY--DSGLVTYKKIKNHIKTYGPDVQVMYNST 315
           + +P YG ++       +G G    G      ++G+  YK +                  
Sbjct: 294 LGMPLYGRSFANT----DGPGKPYNGVGQGSWENGVWDYKALPQ------AGATEHVLPD 343

Query: 316 YEVNYF--STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
              +Y   +T      +D+ +    K  Y K   L G   W  S D 
Sbjct: 344 IMASYSYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSDK 390

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  158 bits (401), Expect = 6e-44
 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)

Query: 427 SAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLP 486
           S  +  T + N+  +  +     +     L D+E AT  F  +  +G G +G VYKGVL 
Sbjct: 3   SKYSKATNSINDALSSSYLVPFES-YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61

Query: 487 CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKS 546
            G  +A+K+ +  S+QG EEF+ E+   +  +H +L+ ++GFC +  E +LIY+YM N +
Sbjct: 62  DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121

Query: 547 LDCYLFGLSHQKT 559
           L  +L+G      
Sbjct: 122 LKRHLYGSDLPTM 134

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  157 bits (399), Expect = 7e-44
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 440 EAGDFNRNVPNLRVYSLADIEAATERFS------IRNKLGEGGYGPVYKGVLPCGEVIAV 493
           E      +      +S  +++  T  F         NK+GEGG+G VYKG +     +AV
Sbjct: 1   ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAV 59

Query: 494 KKLSK----TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDC 549
           KKL+     T+ +  ++F  E+ + AK QH NL+ +LGF  D ++  L+Y YMPN SL  
Sbjct: 60  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119

Query: 550 YLFGLSHQKT 559
            L  L     
Sbjct: 120 RLSCLDGTPP 129

>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392

 Score =  156 bits (396), Expect = 1e-42
 Identities = 74/347 (21%), Positives = 136/347 (39%), Gaps = 50/347 (14%)

Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV-----------------KK 85
           +  D FTH++ + A+I  +  ++ LS    +       D                   KK
Sbjct: 24  LKADQFTHILYAFANIRPS-GEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKK 82

Query: 86  KNPSITTILSIGQGKDTNYS-IYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPN 144
            N ++ T+LSIG      YS  + +       RK F D+S+++ +  GF G+D  W  P 
Sbjct: 83  NNRNLKTLLSIGGW---TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQYPE 139

Query: 145 TSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLLNSIQ 199
                 +  LL    R A     AK+   ++   +LT     + PA     N   L  + 
Sbjct: 140 DEKQANDFVLLLKACREALDAYSAKHPNGKK--FLLTI----ASPAGPQNYNKLKLAEMD 193

Query: 200 RNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKLV 257
           + L++ + +   +        +   + ++ S +   +   S+D+ +K +I+ G+ A+K+V
Sbjct: 194 KYLDFWNLMAYDFSGSWD-KVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIV 252

Query: 258 MCLPFYGYAWTLVKPEDNGIGAAAAGPALY--DSGLVTYKKIKNHIKTYGPDVQVMYNST 315
           + +P YG A+       +GIG +  G      ++G+  YK +           QV     
Sbjct: 253 LGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQ------QGAQVTELED 302

Query: 316 YEVNYF--STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
              +Y           +D V+    K  Y  +  + G   W+ S D 
Sbjct: 303 IAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDK 349

>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406

 Score =  156 bits (396), Expect = 2e-42
 Identities = 71/351 (20%), Positives = 127/351 (36%), Gaps = 46/351 (13%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV--------------- 83
             + +      H++ S  ++      +       + +     D+                
Sbjct: 38  QPADLQASKILHVLYSFMNLRVD-GTVYSGDTYADLEKHYSDDSWNDIGTNAYGCVKQLY 96

Query: 84  --KKKNPSITTILSIGQGKDTNYS-IYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAW 140
             KK N S+  +LSIG      +S  + +     + R +F  +++   + +GF G+D  W
Sbjct: 97  KLKKANRSLKIMLSIGGW---TWSTNFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDW 153

Query: 141 TAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLL 195
             P + TD  N+ LL    R       A  +        L+     + PA     N   L
Sbjct: 154 EYPASETDANNMVLLLQRVRQELDSYSATYANGYH--FQLSI----AAPAGPSHYNVLKL 207

Query: 196 NSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGS--ISGRFARSTDQVLKAWIERGLSA 253
             +   L+ I+ +   Y      + +     LY S         ST   + A+I  G+ A
Sbjct: 208 AQLGSVLDNINLMAYDYAGSWD-SVSGHQTNLYPSTSNPSSTPFSTKAAVDAYIAAGVPA 266

Query: 254 DKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYN 313
            K+++ +P YG A+     +  G   +  G   ++SG+  YK +            V+ +
Sbjct: 267 SKIILGMPIYGRAFVGT--DGPGKPYSTIGEGSWESGIWDYKVLPK------AGATVITD 318

Query: 314 STYEVNYF--STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           S     Y   S+      +D  + VR K++YAK   L G   W+ S D   
Sbjct: 319 SAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKTG 369

>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419

 Score =  156 bits (395), Expect = 3e-42
 Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 38/313 (12%)

Query: 84  KKKNPSITTILSIGQGKDTNYSI-YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAW-- 140
           K+ NP++ TI+S+G G    +S  +S +   ++ R+ F +S++   R Y F G+D  W  
Sbjct: 117 KQTNPNLKTIISVG-G--WTWSNRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEY 173

Query: 141 -----TAPNTS--TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA--- 190
                   N+    D  N  LL  + R    KLDA  +   +  L+  A       A   
Sbjct: 174 PVSGGLDGNSKRPEDKQNYTLLLSKIR---EKLDAAGAVDGKKYLLTIA-----SGASAT 225

Query: 191 --NSYLLNSIQRNLNWIHAVTASYY---EPVS---TNFTAPPAALYGSISGRFARSTDQV 242
              +  L  I   ++WI+ +T  +    + +S         PAA    +      +    
Sbjct: 226 YAANTELAKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAG 285

Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL---YDSGLVTYKKIKN 299
            +  ++ G+ A KLV+ +PFYG  W       NG      G +    +++G   +  ++ 
Sbjct: 286 AQGHLDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVGTWEAGSFDFYDLEA 345

Query: 300 HIKTYGPDVQVMYNSTYEVNYF--STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVS 357
           +           +N T +V Y   ++   +  +DD E+V  K AY K K L G   W++S
Sbjct: 346 NYIN-KNGYTRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWELS 404

Query: 358 FDDHDWLLSQAAA 370
            D +  L ++  A
Sbjct: 405 GDRNKTLQNKLKA 417

>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420

 Score =  149 bits (379), Expect = 4e-40
 Identities = 64/387 (16%), Positives = 122/387 (31%), Gaps = 78/387 (20%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------------KKK 86
            I  ++    THL  S   I +     + +   D   + +   +             +K+
Sbjct: 45  DIDKLDVRQITHLNYSFGLIYNDEKDETNAALKDPAHLHEIWLSPKVQADLQKLPALRKQ 104

Query: 87  NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS 146
           NP +  +LS+G G       +S     +  R  FI S+ +I + YG  G+D  W  P   
Sbjct: 105 NPDLKVLLSVG-G--WGARGFSGAAATAESRAVFIRSAQKIIQQYGLDGIDLDWEFPVNG 161

Query: 147 TDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTA-----RFRYSPPANS 192
                            L    R A   +  +         ++T              + 
Sbjct: 162 AWGLVASQPADRDNFTALLKSLREA---VGEQ--------KLVTIAVGANAESPK---SW 207

Query: 193 YLLNSIQRNLNWIHAVTASYYEPVSTNFTAP--PAALYGSISGRFARSTDQVLKAWIERG 250
             + ++   LN+I+ +T          F +    ++ + +++     S D V+  ++  G
Sbjct: 208 VDVKAVAPVLNYINLMTYDMAYGT-QYFNSNLYDSSHWPTVAAADKYSADFVVNNYLAAG 266

Query: 251 LSADKLVMCLPFYG----------YAWTLVKPEDNGIGAAAAGPAL-----------YDS 289
           L   ++ + + FYG            WT    ++N +     GP                
Sbjct: 267 LKPSQMNLGIGFYGRVPKRAVEPGIDWTKADAQNNPVTQPYFGPQQIALFASLGYDLSKD 326

Query: 290 GLVTYKKIKNHIKTYG---------PDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKI 340
             V Y  I   +              + +V +      +          +++  +V  K 
Sbjct: 327 TYVKYNDIVGKLLNDPQKRFTEHWDDEAKVPW--LSVQSAEGKPLFALSYENPRSVAIKA 384

Query: 341 AYAKEKRLLGYYAWQVSFDDHDWLLSQ 367
            Y K K L G   W+   DD + L  Q
Sbjct: 385 DYIKAKGLAGAMFWEYGADDQNQLARQ 411

>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540

 Score =  150 bits (381), Expect = 2e-39
 Identities = 65/300 (21%), Positives = 114/300 (38%), Gaps = 33/300 (11%)

Query: 84  KKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG-FRGLDFAWTA 142
           K+ +P +  + SIG       S     + +   R  F+ S     + +  F G+D  W  
Sbjct: 237 KQAHPDLKILPSIGGW---TLSDPFFFMGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEF 293

Query: 143 PNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSY 193
           P       N+G         LL  E R     LD  +    +   + +A           
Sbjct: 294 PGGKGANPNLGSPQDGETYVLLMKELR---AMLDQLSVETGRKYELTSA----ISAGKDK 346

Query: 194 L----LNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSIS-GRFARSTDQVLKAWIE 248
           +     N  Q +++ I  ++  +Y            AL         A +T   + A + 
Sbjct: 347 IDKVAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLA 406

Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNGIG----AAAAGPALYDSGLVTYKKIKNHIKTY 304
           +G+   K+V+    YG  WT V    N I     A       +++G+V Y++I     + 
Sbjct: 407 QGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIAGQFMS- 465

Query: 305 GPDVQVMYNSTYEVNYF--STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
             + Q  Y++T E  Y    +      FDD  +V+AK  Y  +K+L G ++W++  D+ D
Sbjct: 466 -GEWQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADNGD 524

>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435

 Score =  148 bits (374), Expect = 3e-39
 Identities = 62/319 (19%), Positives = 111/319 (34%), Gaps = 49/319 (15%)

Query: 84  KKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG----------- 132
           K KNP +  ++S+G    +    +S      + R+  + S I +                
Sbjct: 112 KAKNPKLKVMISLGGWTWSKN--FSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAG 169

Query: 133 -----FRGLDFAW-----------TAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQS 176
                F G+D  W              +T  D  N   L  E+R    +LDA  ST  + 
Sbjct: 170 AAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFR---KQLDAYGSTNNKK 226

Query: 177 LLILTA----RFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGS-- 230
            ++              A  +   +  ++L++        +   +   T   A LY    
Sbjct: 227 YVLSAFLPANPADID--AGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPA 284

Query: 231 --ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYD 288
              +     S D+ +K ++  G+   +L + L  YG  WT  K       A    P  Y+
Sbjct: 285 DPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLAAYGRGWTGAKNVSPWGPATDGAPGTYE 344

Query: 289 SGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRL 348
           +    Y K+K     +       Y++     +   GT W+ +D++   + K  Y   K L
Sbjct: 345 TANEDYDKLKTLGTDH-------YDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGL 397

Query: 349 LGYYAWQVSFDDHDWLLSQ 367
            G   W++S D +  L+  
Sbjct: 398 GGGMWWELSGDRNGELVGA 416

>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312

 Score =  143 bits (363), Expect = 1e-38
 Identities = 55/338 (16%), Positives = 108/338 (31%), Gaps = 61/338 (18%)

Query: 29  VGYLNLSEVS---TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKK 85
           +GYL L +         I +   TH+  S A + +     +L++     +I    +    
Sbjct: 7   IGYLALDDWEFESLFPTIEWKYLTHINASFARVKADG---TLNINPVRKRIESVRE--TA 61

Query: 86  KNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
              ++  ++S+ +    +   +++ + +   RK  I   I   + Y   G D  +   + 
Sbjct: 62  HKHNVKILISLAKN---SPGEFTTAINDPKARKELIQQIIAFTKEYKLDGFDIDYEEYDN 118

Query: 146 STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWI 205
                N   L    R       AK        +++T                 ++  ++I
Sbjct: 119 WDK--NFPSLLVFARGL---YLAKEKN-----MLMTC---AVNSRWLNYGTEWEQYFDYI 165

Query: 206 HAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIER-GLSADKLVMCLPFYG 264
           + ++        T+     A+              + LK W E+   S  K+V  LPFYG
Sbjct: 166 NLMSYDRG--AFTDKPVQHASYD---------DFVKDLKYWNEQCRASKSKIVGGLPFYG 214

Query: 265 YAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTG 324
           Y+W          GA      +  SG++ +   +   K                      
Sbjct: 215 YSWEESLQ-----GAVDDVRGIRYSGILKHLGNEAADK--------------------DN 249

Query: 325 TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
                ++    +  K  + KE    G   WQ+  D H+
Sbjct: 250 IGKTYYNGRPTIANKCKFIKENDYAGVMIWQLFQDAHN 287

>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499

 Score =  147 bits (373), Expect = 1e-38
 Identities = 80/386 (20%), Positives = 142/386 (36%), Gaps = 71/386 (18%)

Query: 37  VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFAD--TVKKKNPSITTIL 94
           VS I+       TH+  S  DINS          +D            +K  NPS+  + 
Sbjct: 33  VSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRIMF 92

Query: 95  SIG-----QGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDM 149
           SIG          +++ Y + V+  + R  F  S +RI + YGF G++  W  P  + ++
Sbjct: 93  SIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQ-AAEV 151

Query: 150 FNIGLLFDEWRIAATKLDA--KNSTRQQSLLILTARFRYSPPANSYL------LNSIQRN 201
                   E R   T L+       RQ     LT           +L      L  I   
Sbjct: 152 DGFIAALQEIR---TLLNQQTITDGRQALPYQLTI---AGAGGAFFLSRYYSKLAQIVAP 205

Query: 202 LNWIHAVTASYYEPVSTNFTAPPAALYGS-------------------------ISGRFA 236
           L++I+ +T     P     T   AAL+G                              F+
Sbjct: 206 LDYINLMTYDLAGPWE-KVTNHQAALFGDAAGPTFYNALREANLGWSWEELTRAFPSPFS 264

Query: 237 RSTDQVLKA-WIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPA---------- 285
            + D  ++   +  G+ + K+VM +PFYG A+  V   + G  ++ + P           
Sbjct: 265 LTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYW 324

Query: 286 ---------LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYF--STGTVWFGFDDVE 334
                      D  + +Y++++  ++      Q ++N   +  Y   +   ++  +DD E
Sbjct: 325 LVGCEECVRDKDPRIASYRQLEQMLQG-NYGYQRLWNDKTKTPYLYHAQNGLFVTYDDAE 383

Query: 335 AVRAKIAYAKEKRLLGYYAWQVSFDD 360
           + + K  Y K+++L G   W +  D+
Sbjct: 384 SFKYKAKYIKQQQLGGVMFWHLGQDN 409

>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574

 Score =  144 bits (364), Expect = 4e-37
 Identities = 46/353 (13%), Positives = 111/353 (31%), Gaps = 51/353 (14%)

Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
            +  +   + C      +       +    +  +  F   + + +  +   LSIG G   
Sbjct: 192 PDGAVLASINCGFTKWEAGDANERYNQEKAKGLLGGFRL-LHEADKELEFSLSIG-G--W 247

Query: 103 NYSI-YSSMVRNSSHRKSFIDSSIRIARLYG-FRGLDFAW--------TAPNTSTDMFNI 152
           + S  +S + ++   R +F++      + +  F  LD  W          PN+  D  N 
Sbjct: 248 SMSGLFSEIAKDEILRTNFVEGIKDFFQRFPMFSHLDIDWEYPGSIGAGNPNSPDDGANF 307

Query: 153 GLLFDEWRIAATKLDAKNSTRQQSLLILTA-----RFRYSPPANSYLLNSIQRNLNWIHA 207
            +L  +   A     +           ++        +      + +   +   +  I+ 
Sbjct: 308 AILIQQITDA---KISNL-------KGISIASSADPAKI---DAANIPALMDAGVTGINL 354

Query: 208 VTASYYEPVSTNFTAPPAALYGSISGRFAR-STDQVLKAWIER-GLSADKLVMCLPFYGY 265
           +T  ++        +    +Y   S  +++ S D  +   I+   +    + +    Y  
Sbjct: 355 MTYDFFTLGD-GKLSHHTNIYRDPSDVYSKYSIDDAVTHLIDEKKVDPKAIFIGYAGYTR 413

Query: 266 AWTLVKPEDNGI-GAAAAGPAL--------YDSGLVTYKKIKNHIKTYG-----PDVQVM 311
                    +     A  G           ++  ++ +  I  H   +         +++
Sbjct: 414 NAKNATITTSIPSEEALKGTYTDANQTLGSFEYSVLEWTDIICHYMDFEKGEGRNGYKLV 473

Query: 312 YNSTYEVNYF--STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           ++   + +Y       V+   D   +VR K  Y K+K L G + W    D+  
Sbjct: 474 HDKVAKADYLYSEATKVFISLDTPRSVRDKGRYVKDKGLGGLFIWSGDQDNGI 526

>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319

 Score =  129 bits (326), Expect = 1e-33
 Identities = 58/356 (16%), Positives = 120/356 (33%), Gaps = 60/356 (16%)

Query: 25  PWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV- 83
                G L     S     N DL   LI   A  +S+       +  + +   +  D   
Sbjct: 4   SNYIAGTL-----SFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNGDIANQLNDAAA 58

Query: 84  -----KKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDF 138
                +++   + TI ++      +  I   ++ N + R + +++   +    G+ G+  
Sbjct: 59  IETTWQRRVTPLATITNLT-SGGFSTEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTI 117

Query: 139 AWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTA-----RFRYSPPANSY 193
            +   + + D         + R     L A          +LT           P    Y
Sbjct: 118 DFEQVS-AADRDLFTGFLRQLRDR---LQAGG-------YVLTIAVPAKTSDNIPWLRGY 166

Query: 194 LLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSA 253
               I   +N++  +   Y    + +   P A +             + ++  I   + +
Sbjct: 167 DYGGIGAVVNYMFIMA--YDWHHAGSEPGPVAPIT---------EIRRTIEFTI-AQVPS 214

Query: 254 DKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYN 313
            K+++ +P YGY W +  P   G  A+A          ++ +        Y   +Q  Y+
Sbjct: 215 RKIIIGVPLYGYDWII--PYQPGTVASA----------ISNQNAIERAMRYQAPIQ--YS 260

Query: 314 STYEVNYFS-----TGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD-HDW 363
           + Y+  +F        T    F+ V ++  K+   +E RL    AWQ++  + H  
Sbjct: 261 AEYQSPFFRYSDQQGRTHEVWFEGVRSMSRKMQIVREYRLQAIGAWQLTLAEGHHH 316

>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584

 Score =  127 bits (321), Expect = 2e-31
 Identities = 67/331 (20%), Positives = 122/331 (36%), Gaps = 64/331 (19%)

Query: 84  KKKNPSITTILSIGQGKDTNYS-IYSSMVRNSSHRKSFIDSSIRIARLYGFR-GLDFAWT 141
           K++NP +  I SIG G     S  +   V +  +R +F+ S  +  + + F  G+D  W 
Sbjct: 239 KQRNPDLKIIPSIG-G--WTLSDPFYDFV-DKKNRDTFVASVKKFLKTWKFYDGVDIDWE 294

Query: 142 APNTSTDMFNIG----------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN 191
            P       + G           L  E R     LD   +   ++  + +A         
Sbjct: 295 FPGGGGAAADKGDPVNDGPAYIALMRELR---VMLDELEAETGRTYELTSA----IGVGY 347

Query: 192 SYL----LNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR---------- 237
             +         + +++I A+T  +Y   + N      ALY     R  +          
Sbjct: 348 DKIEDVDYADAVQYMDYIFAMTYDFYGGWN-NVPGHQTALYCGSFMRPGQCDGGGVDENG 406

Query: 238 --------STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPED------------NGI 277
                   + D  ++  + +G+ A+KLV+    YG  W  V P+              G 
Sbjct: 407 EPYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGK 466

Query: 278 GAAAAGPALYDSGLVTYKKIKNHIKTYG----PDVQVMYNSTYEVNYF--STGTVWFGFD 331
              +    +++ G++ YK IK+ +           +  Y++  E  +    +      FD
Sbjct: 467 LKGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGELITFD 526

Query: 332 DVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
           D  +V AK  YAK   L G ++W++  D+ D
Sbjct: 527 DHRSVLAKGNYAKSLGLAGLFSWEIDADNGD 557

>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393

 Score =  112 bits (282), Expect = 4e-27
 Identities = 39/367 (10%), Positives = 107/367 (29%), Gaps = 44/367 (11%)

Query: 8   IIFHTLLYSELHPAKAKPWIRVGYLNLSEVS--TISGINYDLFTHLICSSADINSTTYQL 65
           ++ H    S     +      +GY+         ++ +    FT +      +     + 
Sbjct: 61  VLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRG-RE 119

Query: 66  SLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSI 125
              +    +    +   V+K    +  +  +    D  Y  + +++ +    +    + +
Sbjct: 120 MFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFE-DWTYDDFRNVLDSEDEIEELSKTVV 178

Query: 126 RIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFR 185
           ++A+   F G          S     +  +      A   L          +        
Sbjct: 179 QVAKNQHFDGFVVEVWNQLLSQKRVGLIHMLTHLAEA---LHQARLLALLVIPPAITPGT 235

Query: 186 YSPPANS-YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLK 244
                 +      +   L+    +T   Y+  + +   P A L               ++
Sbjct: 236 DQLGMFTHKEFEQLAPVLDGFSLMT---YDYSTAHQPGPNAPLS---------WVRACVQ 283

Query: 245 AWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTY 304
               +     K+++ L FYG  +   K                    V   +    +K +
Sbjct: 284 VLDPKSKWRSKILLGLNFYGMDYATSKDA---------------REPVVGARYIQTLKDH 328

Query: 305 GPDVQVMYNSTYEVNYFS-----TGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
            P +   ++S    ++F      +G     +  +++++ ++  A+E   +G   W++   
Sbjct: 329 RPRMV--WDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELG-VGVSIWELGQG 385

Query: 360 DHD-WLL 365
               + L
Sbjct: 386 LDYFYDL 392

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  110 bits (278), Expect = 4e-27
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
              ++   +    +      G +G V+K      E +AVK       Q + + + EV   
Sbjct: 15  GTENLYFQSMPLQLLEVKARGRFGCVWKAQ-LLNEYVAVKIFPIQDKQSW-QNEYEVYSL 72

Query: 515 AKLQHVNLIRVLGFCIDSE----ERMLIYEYMPNKSLDCYL 551
             ++H N+++ +G          +  LI  +    SL  +L
Sbjct: 73  PGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL 113

>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275

 Score =  107 bits (268), Expect = 4e-26
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 24/249 (9%)

Query: 43  INYDLFT-HLICS-------SADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTIL 94
           IN  +     + S       S+   ST  + ++   S      + +  +K  +P++   +
Sbjct: 22  INPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDSSILGPDQISA-IKSSHPNVRVAV 80

Query: 95  SIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGL 154
           S+G     + ++        S   + + S  RI + Y   G+D  +     +TD      
Sbjct: 81  SLGGASVGSNTVQFQAASVDSWVSNAVTSLTRIIQRYNLDGIDIDYEHFQ-NTDKNTFAE 139

Query: 155 LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYE 214
                      L           +I  A     P  + Y L       N I+ +   +  
Sbjct: 140 CIGRLITT---LKKNG-------VISFASISPFPSVDEYYLALFNEYKNAINHINYQFKA 189

Query: 215 PVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPED 274
             S+         Y + + ++       +      G     L +   F+  A +L     
Sbjct: 190 YDSSTSVDKFLGYYNNAASKYKGGN---VLISFSTGPHPGGLPVDKGFFDAATSLKNKGK 246

Query: 275 -NGIGAAAA 282
            +GI    A
Sbjct: 247 LHGIAVWTA 255

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  101 bits (252), Expect = 1e-23
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 7/102 (6%)

Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
           + ++     +   +   +G G YG VYKG L     +AVK  S  + Q F   K  +   
Sbjct: 4   AASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEK-NIYRV 61

Query: 515 AKLQHVNLIRVLGFCI-----DSEERMLIYEYMPNKSLDCYL 551
             ++H N+ R +            E +L+ EY PN SL  YL
Sbjct: 62  PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 83.9 bits (208), Expect = 5e-18
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
                   LG+G +G   K      GEV+ +K+L +   +    F  EV +   L+H N+
Sbjct: 10  SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++ +G     +    I EY+   +L   +
Sbjct: 70  LKFIGVLYKDKRLNFITEYIKGGTLRGII 98

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 81.6 bits (202), Expect = 4e-17
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 3/99 (3%)

Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKL--SKTSTQGFEEFKNEVM 512
              D++      +I+ K+G G +G V++     G  +AVK L       +   EF  EV 
Sbjct: 28  DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVA 86

Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +  +L+H N++  +G         ++ EY+   SL   L
Sbjct: 87  IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL 125

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 80.3 bits (199), Expect = 7e-17
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 1/106 (0%)

Query: 446 RNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE 505
           +N P+         E   +  +   +LG G +G V  G       +A+K + K  +   +
Sbjct: 6   KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSED 64

Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           EF  E  +   L H  L+++ G C       +I EYM N  L  YL
Sbjct: 65  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKL----SKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           +   +G GG+G VY+     G+ +AVK       +  +Q  E  + E  L A L+H N+I
Sbjct: 11  LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            + G C+      L+ E+     L+  L
Sbjct: 70  ALRGVCLKEPNLCLVMEFARGGPLNRVL 97

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 8/96 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL--------PCGEVIAVKKLSKTSTQGFEEFKNEVMLTA 515
           E       LG+G +  ++KGV              + +K L K      E F     + +
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           KL H +L+   G C+  +E +L+ E++   SLD YL
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKL--SKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
           +   KL E   G ++KG    G  I VK L     ST+   +F  E        H N++ 
Sbjct: 13  NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71

Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
           VLG C         LI  +MP  SL   L
Sbjct: 72  VLGACQSPPAPHPTLITHWMPYGSLYNVL 100

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)

Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKL--SKTSTQGFEE 506
            +     L + +   E+  I   +G+G +G VY G    GEV A++ +   + +    + 
Sbjct: 18  ASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRW-HGEV-AIRLIDIERDNEDQLKA 75

Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           FK EVM   + +H N++  +G C+      +I      ++L   +
Sbjct: 76  FKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV 120

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 6/94 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE------VIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
               ++ +LGEG +G V+              ++AVK L + S    ++F+ E  L   L
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           QH +++R  G C +    ++++EYM +  L+ +L
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 77.6 bits (192), Expect = 4e-16
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
              +   ++G G +G V+ G     + +A+K + +      E+F  E  +  KL H  L+
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++ G C++     L+ E+M +  L  YL
Sbjct: 67  QLYGVCLEQAPICLVTEFMEHGCLSDYL 94

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 78.5 bits (194), Expect = 5e-16
 Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-----CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
                 ++LG+G +G V            G ++AVK+L  +      +F+ E+ +   L 
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82

Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
              +++  G       +   L+ EY+P+  L  +L
Sbjct: 83  SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL 117

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 77.8 bits (192), Expect = 6e-16
 Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           +   +   +G G +G V K      + +A+K++   S +  + F  E+   +++ H N++
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++ G C++     L+ EY    SL   L
Sbjct: 65  KLYGACLNP--VCLVMEYAEGGSLYNVL 90

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 78.1 bits (193), Expect = 9e-16
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 2/90 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKL-SKTSTQGFEEFKNEVMLTAKLQHVN 521
           E   +  ++G G +G V+ G L      +AVK            +F  E  +  +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++R++G C   +   ++ E +       +L
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-----CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
                  +LG+G +G V            GEV+AVKKL  ++ +   +F+ E+ +   LQ
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69

Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
           H N+++  G C  +  R   LI EY+P  SL  YL
Sbjct: 70  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQG-------FEEFKNEVMLTA 515
                  ++G+GG+G V+KG L     V+A+K L    ++G       F+EF+ EV + +
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78

Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            L H N++++ G         ++ E++P   L   L
Sbjct: 79  NLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRL 112

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 6/94 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL----PCGEVI--AVKKLSKTSTQGFEEFKNEVMLTAKL 517
               ++ +LGEG +G V+        P  + +  AVK L   +    ++F+ E  L   L
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           QH ++++  G C D +  ++++EYM +  L+ +L
Sbjct: 75  QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-----CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
                  +LG+G +G V            GEV+AVKKL  ++ +   +F+ E+ +   LQ
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100

Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
           H N+++  G C  +  R   LI EY+P  SL  YL
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 75.8 bits (187), Expect = 3e-15
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVN 521
            + ++  ++G G +G VYKG    G+V AVK L+ T  + Q  + FKNEV +  K +HVN
Sbjct: 24  GQITVGQRIGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++  +G+     +  ++ ++    SL  +L
Sbjct: 82  ILLFMGYSTA-PQLAIVTQWCEGSSLYHHL 110

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 75.3 bits (186), Expect = 3e-15
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL----PCGEVI--AVKKLSKTST-QGFEEFKNEVMLTAK 516
                  +LGE  +G VYKG L    P  +    A+K L   +     EEF++E ML A+
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           LQH N++ +LG     +   +I+ Y  +  L  +L
Sbjct: 69  LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 74.9 bits (185), Expect = 4e-15
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           E  ++  +LG G +G V  G       +AVK + K  +   +EF  E     KL H  L+
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +  G C       ++ EY+ N  L  YL
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYL 94

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 75.5 bits (186), Expect = 4e-15
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 8/96 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKL-SKTSTQGFEEFKNEVMLTAKL 517
                   LGEG +G V            GE++AVK L +    Q    +K E+ +   L
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90

Query: 518 QHVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
            H ++I+  G C D+      L+ EY+P  SL  YL
Sbjct: 91  YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL 126

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 75.0 bits (185), Expect = 4e-15
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
              ++++KLG G YG VY+GV     + +AVK L K  T   EEF  E  +  +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +++LG C       +I E+M   +L  YL
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 75.0 bits (185), Expect = 5e-15
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-----CGEVIAVKKL-SKTSTQGFEEFKNEVMLTAKL 517
                   LGEG +G V            GE +AVK L  ++      + K E+ +   L
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80

Query: 518 QHVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
            H N+++  G C +       LI E++P+ SL  YL
Sbjct: 81  YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 74.2 bits (183), Expect = 7e-15
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           +   +   +G+G +G V  G     +V AVK +   +T   + F  E  +  +L+H NL+
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRGNKV-AVKCIKNDATA--QAFLAEASVMTQLRHSNLV 77

Query: 524 RVLGFCIDSEER-MLIYEYMPNKSLDCYL 551
           ++LG  ++ +    ++ EYM   SL  YL
Sbjct: 78  QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 106

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE------VIAVKKLSKTST-QGFEEFKNEVMLTAK 516
           +  ++   LG G +G VY+G +           +AVK L +  + Q   +F  E ++ +K
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             H N++R +G  + S  R ++ E M    L  +L
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 74.3 bits (183), Expect = 2e-14
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL--PCGEVI--AVKKLSKTST-QGFEEFKNEVMLTAKLQ 518
              SI   +G G +G V  G L  P  + I  A+K L    T +   +F  E  +  +  
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           H N+IR+ G    S+  M++ EYM N SLD +L
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL----PCGEVI--AVKKLSKTST-QGFEEFKNEVMLTAK 516
                   +GEG +G V++       P       AVK L + ++     +F+ E  L A+
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             + N++++LG C   +   L++EYM    L+ +L
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTSTQG-FEEFKNEVMLTAKL 517
             F     LG G +G VYKG+  P GE     +A+K+L + ++    +E  +E  + A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            + ++ R+LG C+      LI + MP   L  Y+
Sbjct: 75  DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYV 107

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 72.7 bits (179), Expect = 3e-14
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL--PCGEVI--AVKKL---SKTSTQGFEEFKNEVMLTAK 516
           +   +  KLG+G +G V +G    P G+ +  AVK L     +  +  ++F  EV     
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           L H NLIR+ G  + +    ++ E  P  SL   L
Sbjct: 78  LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRL 111

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 73.6 bits (181), Expect = 3e-14
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE------VIAVKKLSKTST-QGFEEFKNEVMLTAK 516
           +  ++   LG G +G VY+G +           +AVK L +  + Q   +F  E ++ +K
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             H N++R +G  + S  R ++ E M    L  +L
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 73.1 bits (180), Expect = 3e-14
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVI----AVKKL-SKTSTQGFEEFKNEVMLTAKL 517
                   LG G +G V+KGV  P GE I     +K +  K+  Q F+   + ++    L
Sbjct: 13  TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            H +++R+LG C       L+ +Y+P  SL  ++
Sbjct: 73  DHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHV 105

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 455 SLADIEAATERFSIR--NKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEF 507
            + D+    ER        +G+G +G VY G            A+K LS+ T  Q  E F
Sbjct: 10  EVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF 69

Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEER-MLIYEYMPNKSLDCYL 551
             E +L   L H N++ ++G  +  E    ++  YM +  L  ++
Sbjct: 70  LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI 114

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 72.7 bits (179), Expect = 3e-14
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 6/94 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL--PCGEV---IAVKKLSK-TSTQGFEEFKNEVMLTAKL 517
              + +  +G G +G VYKG+L    G+    +A+K L    + +   +F  E  +  + 
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            H N+IR+ G     +  M+I EYM N +LD +L
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFL 137

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSKTSTQG-FEEFKNEVML 513
           I  ++        +G G +G VY G L   +      AVK L++ +  G   +F  E ++
Sbjct: 20  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79

Query: 514 TAKLQHVNLIRVLGFCIDSEE-RMLIYEYMPNKSLDCYL 551
                H N++ +LG C+ SE   +++  YM +  L  ++
Sbjct: 80  MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 72.3 bits (178), Expect = 5e-14
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE------VIAVKKLSKTSTQG-FEEFKNEVMLTAK 516
           +   +   LGEG +G V K      +       +AVK L + ++     +  +E  +  +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           + H ++I++ G C      +LI EY    SL  +L
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 72.3 bits (178), Expect = 6e-14
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL--PCGEVI--AVKKL-SKTSTQGFEEFKNEVMLTAKLQ 518
            R  I   +G G  G V  G L  P    +  A+K L +  + +   +F +E  +  +  
Sbjct: 49  SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           H N+IR+ G        M++ EYM N SLD +L
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 71.9 bits (177), Expect = 6e-14
 Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVK--KLSKTSTQGFEEF 507
             L D+        +   LGEG +G V +G L   +     +AVK  KL  +S +  EEF
Sbjct: 24  NKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEF 83

Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSE-----ERMLIYEYMPNKSLDCYL 551
            +E        H N+IR+LG CI+       + M+I  +M    L  YL
Sbjct: 84  LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 72.9 bits (179), Expect = 7e-14
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
              ++++KLG G YG VY+GV     + +AVK L + + +  EEF  E  +  +++H NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNL 278

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +++LG C       +I E+M   +L  YL
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYL 307

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 71.6 bits (176), Expect = 8e-14
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQG-FEEFKNEVMLTAK 516
           E+ ++  +LG+G +G VY+GV            +A+K +++ ++     EF NE  +  +
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
               +++R+LG     +  ++I E M    L  YL
Sbjct: 85  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 71.1 bits (175), Expect = 9e-14
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 468 IRNKLGEGGYGPVYKGVL--PCGEV-IAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLI 523
              +LG G +G V +GV      ++ +A+K L + T     EE   E  +  +L +  ++
Sbjct: 14  ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           R++G C  +E  ML+ E      L  +L
Sbjct: 74  RLIGVC-QAEALMLVMEMAGGGPLHKFL 100

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 71.7 bits (176), Expect = 1e-13
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSKTSTQG-FEEFKNEVML 513
           I  ++        +G G +G VY G L   +      AVK L++ +  G   +F  E ++
Sbjct: 84  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 143

Query: 514 TAKLQHVNLIRVLGFCIDSEE-RMLIYEYMPNKSLDCYL 551
                H N++ +LG C+ SE   +++  YM +  L  ++
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 182

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 71.2 bits (175), Expect = 1e-13
 Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVK--KLSKTSTQGFEEF 507
             L D+    ++F++   LG+G +G V +  L   +     +AVK  K    ++   EEF
Sbjct: 13  EKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEF 72

Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEER------MLIYEYMPNKSLDCYL 551
             E     +  H ++ +++G  + S  +      M+I  +M +  L  +L
Sbjct: 73  LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 72.0 bits (177), Expect = 1e-13
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           +   +   +G+G +G V  G     +V AVK +   +T   + F  E  +  +L+H NL+
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKV-AVKCIKNDATA--QAFLAEASVMTQLRHSNLV 249

Query: 524 RVLGFCIDSEER-MLIYEYMPNKSLDCYL 551
           ++LG  ++ +    ++ EYM   SL  YL
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 278

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 70.3 bits (173), Expect = 2e-13
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK-TSTQGFEEFKNEVMLTAKLQ 518
           E   +   LGEG +G VY+GV     GE I  AVK   K  +    E+F +E ++   L 
Sbjct: 12  EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           H ++++++G   + E   +I E  P   L  YL
Sbjct: 72  HPHIVKLIGII-EEEPTWIIMELYPYGELGHYL 103

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 70.8 bits (174), Expect = 2e-13
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL--PCGEV---IAVKKL-SKTSTQGFEEFKNEVMLTAKL 517
             F     LG G +G VYKG+      +V   +A+K+L   TS +  +E  +E  + A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            + ++ R+LG C+ +    LI + MP   L  Y+
Sbjct: 75  DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYV 107

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           E   +  +LG G +G V+ G       +AVK L K  +   + F  E  L  +LQH  L+
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           R+       E   +I EYM N SL  +L
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFL 98

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEV---IAVKKLSKTSTQG-FEEFKNEVMLTAKL-Q 518
                ++ +GEG +G V K  +    +    A+K++ + +++    +F  E+ +  KL  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           H N+I +LG C       L  EY P+ +L  +L
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 70.5 bits (173), Expect = 2e-13
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNE--VMLTAKLQHVNLIRV 525
           +  ++G+G YG V+ G    GE +AVK      T     +  E  +  T  ++H N++  
Sbjct: 41  MVKQIGKGRYGEVWMGKW-RGEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGF 96

Query: 526 LGFCIDSEER----MLIYEYMPNKSLDCYL 551
           +   I          LI +Y  N SL  YL
Sbjct: 97  IAADIKGTGSWTQLYLITDYHENGSLYDYL 126

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 69.7 bits (171), Expect = 3e-13
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNE--VMLTAKLQHVNLIRV 525
           +   +G+G YG V++G    GE +AVK     S++  + +  E  +  T  L+H N++  
Sbjct: 12  LLECVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGF 67

Query: 526 LGFCIDSE----ERMLIYEYMPNKSLDCYL 551
           +   + S     +  LI  Y    SL  YL
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYL 97

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 6/93 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK-TSTQGFEEFKNEVMLTAKLQ 518
           ER  +   +GEG +G V++G+   P    +  A+K     TS    E+F  E +   +  
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           H ++++++G   +     +I E      L  +L
Sbjct: 75  HPHIVKLIGVITE-NPVWIIMELCTLGELRSFL 106

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 70.7 bits (173), Expect = 6e-13
 Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 6/140 (4%)

Query: 417 MKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGG 476
           + +L   E+   ++     +   +  +         + S  D E   ER  +   +GEG 
Sbjct: 343 IPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQ 402

Query: 477 YGPVYKGVL--PCGEVI--AVKKL-SKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
           +G V++G+   P    +  A+K   + TS    E+F  E +   +  H ++++++G   +
Sbjct: 403 FGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462

Query: 532 SEERMLIYEYMPNKSLDCYL 551
                +I E      L  +L
Sbjct: 463 -NPVWIIMELCTLGELRSFL 481

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 68.8 bits (169), Expect = 6e-13
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 464 ERFSIRNK-LGEGGYGPVYKGVLPCGEV---IAVK--KLSKTSTQGFEEFKNEVMLTAKL 517
           +  ++ +K LG G +G V KG     +V   +AVK  K         +E   E  +  +L
Sbjct: 16  KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 75

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            +  ++R++G C ++E  ML+ E      L+ YL
Sbjct: 76  DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL 108

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 68.5 bits (168), Expect = 1e-12
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL------PCGEVI--AVKKL-SKTSTQGFEEFKNEVMLT 514
           ++ ++   LGEG +G V              E +  AVK L    + +   +  +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 515 AKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             + +H N+I +LG C       +I EY    +L  YL
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 68.2 bits (167), Expect = 2e-12
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP------CGEVI--AVKKL-SKTSTQGFEEFKNEVMLT 514
           ++ ++   LGEG +G V              E +  AVK L    + +   +  +E+ + 
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 515 AKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             + +H N+I +LG C       +I EY    +L  YL
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 68.6 bits (168), Expect = 2e-12
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           E   +  KLG G +G V+         +AVK + K  +   E F  E  +   LQH  L+
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++       E   +I E+M   SL  +L
Sbjct: 247 KLHAVVTK-EPIYIITEFMAKGSLLDFL 273

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG 527
           ++  +G+G +G V++G    GE +AVK  S    + +   + E+  T  L+H N++  + 
Sbjct: 46  LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW-FREAEIYQTVMLRHENILGFIA 103

Query: 528 FCIDSE----ERMLIYEYMPNKSLDCYL 551
                     +  L+ +Y  + SL  YL
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYL 131

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKG----VLPCGEVI--AVKKL-SKTSTQGFEEFKNEVMLTAK 516
            R S    LG G +G V +     ++     +  AVK L         E   +E+ + + 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 517 L-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           L  H+N++ +LG C      ++I EY     L  +L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 68.4 bits (167), Expect = 3e-12
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H  L+
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++     + E   ++ EYM   SL  +L
Sbjct: 326 QLYAVVSE-EPIYIVTEYMSKGSLLDFL 352

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 9/97 (9%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKL-SKTSTQGFEEFKNEVMLTAK 516
           +R  +   LG G +G V +              +AVK L    +        +E+ +   
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 517 L-QHVNLIRVLGFCIDSEE-RMLIYEYMPNKSLDCYL 551
           +  H+N++ +LG C       M+I E+    +L  YL
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 18/148 (12%)

Query: 412 YKYNQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNK 471
           YKY Q  +  +  +            E+  G+    +   ++      E           
Sbjct: 4   YKYKQKPKYQVRWK----------IIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKT 53

Query: 472 LGEGGYGPVYKGV---LPCGE---VIAVKKL-SKTSTQGFEEFKNEVMLTAKL-QHVNLI 523
           LG G +G V +     L   +    +AVK L S       E   +E+ + + L QH N++
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            +LG C      ++I EY     L  +L
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL 141

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 68.4 bits (167), Expect = 3e-12
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 468 IRNKLGEGGYGPVYKGVL-PCGEVI--AVKKL-SKTSTQGFEEFKNEVMLTAKLQHVNLI 523
              +LG G +G V +GV     + I  A+K L   T     EE   E  +  +L +  ++
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           R++G C  +E  ML+ E      L  +L
Sbjct: 400 RLIGVC-QAEALMLVMEMAGGGPLHKFL 426

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 67.9 bits (166), Expect = 3e-12
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           E   +  KLG+G +G V+ G       +A+K L K  T   E F  E  +  KL+H  L+
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           ++     + E   ++ EYM   SL  +L
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSLLDFL 269

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 67.4 bits (165), Expect = 3e-12
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 10/115 (8%)

Query: 447 NVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLP--------CGEVIAVKKL-S 497
            V    +      E   +R  +   LGEG +G V                  +AVK L S
Sbjct: 52  GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 111

Query: 498 KTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             + +   +  +E+ +   + +H N+I +LG C       +I EY    +L  YL
Sbjct: 112 DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 66.6 bits (163), Expect = 4e-12
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 8/96 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL----PCGEVI--AVKKL-SKTSTQGFEEFKNEVMLTAK 516
           E       LG G +G V           G  I  AVK L  K  +   E   +E+ +  +
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 517 L-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           L  H N++ +LG C  S    LI+EY     L  YL
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
           +   +    R  LG+G YG VY G  L     IA+K++ +  ++  +    E+ L   L+
Sbjct: 18  DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK 77

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
           H N+++ LG   ++    +  E +P  SL
Sbjct: 78  HKNIVQYLGSFSENGFIKIFMEQVPGGSL 106

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 63.5 bits (154), Expect = 5e-11
 Identities = 12/115 (10%), Positives = 37/115 (32%), Gaps = 8/115 (6%)

Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGV------LPCGEVIAVKKL 496
           ++   +P ++  +  + +  ++   + + LGEG +  VY+            +   +K  
Sbjct: 46  EWQCKLPAIKPKT--EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQ 103

Query: 497 SKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
              +   F      +           ++     +     +L+ E     +L   +
Sbjct: 104 KPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI 158

>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271

 Score = 61.9 bits (150), Expect = 9e-11
 Identities = 38/291 (13%), Positives = 80/291 (27%), Gaps = 43/291 (14%)

Query: 20  PAKAKPWIRVGYLNLSEVS-------TISGINYDLFTHLICSSADIN--STTYQLSLSLP 70
               +    V Y+ ++  S       T++    + F   +  +A+IN  + T    L   
Sbjct: 3   APVKQGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAANINYDTGTKTAYLHFN 62

Query: 71  SDENQIAKFADT--VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIA 128
            +  ++   A T     +   I  +LS+      +     +   +     +F        
Sbjct: 63  ENVQRVLDNAVTQIRPLQQQGIKVLLSVLGN---HQGAGFANFPSQQAASAFAKQLSDAV 119

Query: 129 RLYGFRGLDFAWTAPN------TSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTA 182
             YG  G+DF               +  +   L    R     +  K        +I   
Sbjct: 120 AKYGLDGVDFDDEYAEYGNNGTAQPNDSSFVHLVTALR---ANMPDK--------IISLY 168

Query: 183 RFRYSPPANSYLLNSIQRNLNWI-HAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQ 241
               +    SY    +    ++  +    ++  P      A  +     I      +   
Sbjct: 169 NIGPAASRLSYGGVDVSDKFDYAWNPYYGTWQVPGIALPKAQLSPAAVEIGRTSRSTVAD 228

Query: 242 VLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLV 292
           + +  ++ G           +  Y    +   D     +A    LY S  V
Sbjct: 229 LARRTVDEG-----------YGVYLTYNLDGGDRTADVSAFTRELYGSEAV 268

>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333

 Score = 61.1 bits (148), Expect = 3e-10
 Identities = 42/279 (15%), Positives = 84/279 (30%), Gaps = 27/279 (9%)

Query: 48  FTHLICS--SADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYS 105
           +  +  S      + +T + S    +D +  +  +  +K K      +LSIG        
Sbjct: 32  WDVINVSFGETGGDRSTVEFSPVYGTDADFKSDIS-YLKSKG--KKVVLSIGGQNG---- 84

Query: 106 IYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA--A 163
               ++ +++ +  FI+S   +   YGF G+D    +                 +I    
Sbjct: 85  --VVLLPDNAAKDRFINSIQSLIDKYGFDGIDIDLESGIYLNGNDTNFKNPTTPQIVNLI 142

Query: 164 TKLDAKNSTRQQSLLILTA--RFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFT 221
           + +   +        +L+      Y     S   +     L  I+ V           + 
Sbjct: 143 SAIRTISD-HYGPDFLLSMAPETAYVQGGYSAYGSIWGAYLPIIYGVKDKL------TYI 195

Query: 222 APPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYG---YAWTLVKPEDNGIG 278
                  GS  G    + +Q           AD L+   P  G     +  ++ +   IG
Sbjct: 196 HVQHYNAGSGIGMDGNNYNQ--GTADYEVAMADMLLHGFPVGGNANNIFPALRSDQVMIG 253

Query: 279 AAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE 317
             AA  A    G ++  ++K  +      V         
Sbjct: 254 LPAAPAAAPSGGYISPTEMKKALNYIIKGVPFGGKYKLS 292

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
            +    + +    KLGEGG+  V     L  G   A+K++     Q  EE + E  +   
Sbjct: 23  MVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL 82

Query: 517 LQHVNLIRVLGFCIDSEERM----LIYEYMPNKSLDCYLFGLSHQKTYF 561
             H N++R++ +C+          L+  +    +L   +  L  +  + 
Sbjct: 83  FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL 131

>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290

 Score = 59.2 bits (143), Expect = 9e-10
 Identities = 31/221 (14%), Positives = 64/221 (28%), Gaps = 31/221 (14%)

Query: 43  INYDLFTHLICSSADINSTTYQLSLSL--PSDENQIAKFADTVKKKNPSITTILSIGQGK 100
            N    TH+I ++  +N     ++L+   P  E     +A+    K   +  +  +G   
Sbjct: 37  KNNTGVTHIIIAAFHLNEDPGHITLNDDPPDHEMYNPLWAEVPVLKRSGVKVMGMLGGA- 95

Query: 101 DTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWR 160
                 Y  +  +    + +    + + R +   GLD       +   +     L D  +
Sbjct: 96  --AQGSYRCLDGDQEKFERYYQPLLAMVRRHQLDGLDLDVEEEMSLPGIIR---LIDRLK 150

Query: 161 IAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNF 220
                             I+T       P  + LL       N          +   +  
Sbjct: 151 -----------LDLGDDFIITLA-----PVAAALLG----IGNLSGFDYRQLEQQRGSKI 190

Query: 221 TAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLP 261
           +   A  Y            ++  A + +G S  ++V  L 
Sbjct: 191 SWYNAQFYNGWG---LAEDPRMYAAIVAQGWSPQRVVYGLL 228

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 463 TERFS-IRNKLGEGGYGPVYKGV-LPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQ 518
             RF     ++G G +  VYKG+       +A    +  K +    + FK E  +   LQ
Sbjct: 24  DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ 83

Query: 519 HVNLIRVLGFCIDSEERM----LIYEYMPNKSLDCYL 551
           H N++R       + +      L+ E M + +L  YL
Sbjct: 84  HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL 120

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
                   K+GEG  G V        G  +AVK +     Q  E   NEV++    QH N
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLD 548
           ++ +    +  EE  ++ E++   +L 
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALT 130

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 18/86 (20%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            ++++   K+G+G  G VY  + +  G+ +A+++++       E   NE+++  + ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSL 547
           ++  L   +  +E  ++ EY+   SL
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSL 104

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 57.6 bits (139), Expect = 4e-09
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQG-FEEFKNEV-MLTA 515
           +R  +   LG G +G V +              +AVK L + +T        +E+ +L  
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 516 KLQHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL 551
              H+N++ +LG C       M+I E+    +L  YL
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 56.9 bits (138), Expect = 5e-09
 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            E + I  +LG+G +G VYK      G + A K +   S +  E++  E+ + A   H  
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLD 548
           ++++LG      +  ++ E+ P  ++D
Sbjct: 78  IVKLLGAYYHDGKLWIMIEFCPGGAVD 104

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 457 ADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA 515
            +        + + ++G G +G V++      G   AVKK+     +       E++  A
Sbjct: 51  YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACA 105

Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            L    ++ + G   +     +  E +   SL
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 56.8 bits (137), Expect = 1e-08
 Identities = 23/128 (17%), Positives = 50/128 (39%), Gaps = 3/128 (2%)

Query: 418 KRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAA--TERFSIRNKLGEG 475
           +R     ++  K    +    +   ++  ++         +I+     + + I  +LG G
Sbjct: 109 RRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTG 168

Query: 476 GYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE 534
            +G V++      G   A K +        E  + E+   + L+H  L+ +     D  E
Sbjct: 169 AFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 228

Query: 535 RMLIYEYM 542
            ++IYE+M
Sbjct: 229 MVMIYEFM 236

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVN 521
             +SI  ++G GG   V++ +    ++ A+K ++      Q  + ++NE+    KLQ  +
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 522 L--IRVLGFCIDSEERMLIYEY 541
              IR+  + I  +   ++ E 
Sbjct: 69  DKIIRLYDYEITDQYIYMVMEC 90

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVN 521
             +SI  ++G GG   V++ +    ++ A+K ++      Q  + ++NE+    KLQ  +
Sbjct: 28  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87

Query: 522 L--IRVLGFCIDSEERMLIYEY 541
              IR+  + I  +   ++ E 
Sbjct: 88  DKIIRLYDYEITDQYIYMVMEC 109

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL---SKTSTQGFEEFKNEVMLTAKLQH 519
             F I  K+G G +  VY+   L  G  +A+KK+        +   +   E+ L  +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYF 561
            N+I+     I+  E  ++ E      L   +     QK   
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI 133

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 55.5 bits (134), Expect = 3e-08
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 13/89 (14%)

Query: 463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHV 520
              ++    +G G +G VY+  L   GE++A+KK+ +      + FKN E+ +  KL H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHC 107

Query: 521 NLIRVLGFCIDSEERM------LIYEYMP 543
           N++R+  F   S E+       L+ +Y+P
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 55.2 bits (133), Expect = 3e-08
 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVN 521
             +SI  ++G GG   V++ +    ++ A+K ++      Q  + ++NE+    KLQ  +
Sbjct: 56  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 522 L--IRVLGFCIDSEERMLIYEY 541
              IR+  + I  +   ++ E 
Sbjct: 116 DKIIRLYDYEITDQYIYMVMEC 137

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 54.5 bits (132), Expect = 3e-08
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 13/115 (11%)

Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE-FKN----EV 511
           D+++  +R+   + LGEG +  VYK       +++A+KK+        ++        E+
Sbjct: 4   DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63

Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL------FGLSHQKTY 560
            L  +L H N+I +L          L++++M    L+  +         SH K Y
Sbjct: 64  KLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAY 117

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 54.3 bits (131), Expect = 4e-08
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 6/122 (4%)

Query: 424 EEDSAKASNTRANNETEAGD--FNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVY 481
            +   K    + N+  +  +  + + VP         +    + + I  +LG G +G V+
Sbjct: 12  SKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVY---DYYDILEELGSGAFGVVH 68

Query: 482 KGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE 540
           + V    G V   K ++          KNE+ +  +L H  LI +     D  E +LI E
Sbjct: 69  RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128

Query: 541 YM 542
           ++
Sbjct: 129 FL 130

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 53.8 bits (130), Expect = 5e-08
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 5/102 (4%)

Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTST 501
             + +     +Y    I+   + F  + KLG G +G V+       G    +K ++K  +
Sbjct: 4   HHHHSSGRENLYFQGTID---DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS 60

Query: 502 QG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM 542
           Q   E+ + E+ +   L H N+I++     D     ++ E  
Sbjct: 61  QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 54.7 bits (132), Expect = 5e-08
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT-- 499
             + +     +Y         ER++I   LG+G +G V K       +  AVK ++K   
Sbjct: 4   HHHHSSGRENLYFQGTFA---ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA 60

Query: 500 STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY 541
             +       EV L  KL H N++++     DS    ++ E 
Sbjct: 61  KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 53.7 bits (130), Expect = 5e-08
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 21/111 (18%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN--------EVMLTA 515
           E++    K+GEG YG VYK     G ++A+K++        +            E+ L  
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74

Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL------FGLSHQKTY 560
           +L H N++ ++          L++E+M  K L   L         S  K Y
Sbjct: 75  ELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIY 124

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
             F     +G GG+G V+K      G+   +K++   +    E+ + EV   AKL HVN+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           +   G     +          ++S    LF
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLF 96

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 54.3 bits (131), Expect = 6e-08
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQH 519
           +E +    KLG G YG V            A+K + KT  ST    +   EV +   L H
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 520 VNLIRVLGFCIDSEERMLIYEY 541
            N++++  F  D     L+ E 
Sbjct: 96  PNIMKLYDFFEDKRNYYLVMEC 117

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG-FEEFKNEVMLTAKLQHV 520
            E F+   K+G+G +G V+KG+     +V+A+K +     +   E+ + E+ + ++    
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80

Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL 547
            + +  G  +   +  +I EY+   S 
Sbjct: 81  YVTKYYGSYLKDTKLWIIMEYLGGGSA 107

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 53.5 bits (129), Expect = 7e-08
 Identities = 14/86 (16%), Positives = 37/86 (43%), Gaps = 2/86 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVN 521
           + + ++  +G G    V      P  E +A+K+++ +      +E   E+   ++  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSL 547
           ++      +  +E  L+ + +   S+
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSV 100

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 52.9 bits (128), Expect = 9e-08
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 14/87 (16%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN--------EVMLTA 515
           E++    K+GEG YG VYK     GE  A+KK+        E+           E+ +  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILK 55

Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYM 542
           +L+H N++++       +  +L++E++
Sbjct: 56  ELKHSNIVKLYDVIHTKKRLVLVFEHL 82

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 52.9 bits (128), Expect = 1e-07
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 21/112 (18%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN--------EVMLT 514
           E F    K+GEG YG VYK      GEV+A+KK+        +            E+ L 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56

Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPN------KSLDCYLFGLSHQKTY 560
            +L H N++++L       +  L++E++         +       L   K+Y
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 108

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.4 bits (128), Expect = 1e-07
 Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 5/103 (4%)

Query: 450 NLRVYSLADIEAATERFSIRNKLGEG--GYGPVYKGV-LPCGEVIAVKK--LSKTSTQGF 504
           NL    ++        + +   +G+G      V      P GE + V++  L   S +  
Sbjct: 11  NLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMV 70

Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
              + E+ ++    H N++      I   E  ++  +M   S 
Sbjct: 71  TFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSA 113

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            + +++ N +G G +G V   V        A KK+ K   +  + FK E+ +   L H N
Sbjct: 8   NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67

Query: 522 LIRVLGFCIDSEERMLIYEYM 542
           +IR+     D+ +  L+ E  
Sbjct: 68  IIRLYETFEDNTDIYLVMELC 88

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 21/111 (18%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN--------EVMLT 514
           +R+    KLGEG YG VYK +     E +A+K++        E  +         EV L 
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR------LEHEEEGVPGTAIREVSLL 87

Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----FGLSHQKTY 560
            +LQH N+I +      +    LI+EY     L  Y+       +   K++
Sbjct: 88  KELQHRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNPDVSMRVIKSF 137

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG---FEEFKNEVMLTAKLQ 518
            + FS   ++G G +G VY    +   EV+A+KK+S +  Q    +++   EV    KL+
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
           H N I+  G  +      L+ EY    + D
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCLGSASD 142

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN----EVMLTAKLQ 518
           E++     +GEG YG V K      G ++A+KK  ++     +  K     E+ L  +L+
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD--KMVKKIAMREIKLLKQLR 82

Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
           H NL+ +L  C   +   L++E++
Sbjct: 83  HENLVNLLEVCKKKKRWYLVFEFV 106

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            E F +  KLGEG YG VYK +    G+++A+K++        +E   E+ +  +    +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPH 85

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLD 548
           +++  G    + +  ++ EY    S+ 
Sbjct: 86  VVKYYGSYFKNTDLWIVMEYCGAGSVS 112

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 52.1 bits (126), Expect = 2e-07
 Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 15/88 (17%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN--------EVMLT 514
           +++    K+GEG YG V+K       E++A+K++        ++           E+ L 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLL 55

Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYM 542
            +L+H N++R+       ++  L++E+ 
Sbjct: 56  KELKHKNIVRLHDVLHSDKKLTLVFEFC 83

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 6/93 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHVN 521
             + + + LG+G    V++G     G++ A+K  +  S     +    E  +  KL H N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 522 LIRVLGFCIDSEERMLIY---EYMPNKSLDCYL 551
           ++++     +           E+ P  SL   L
Sbjct: 69  IVKLFAI-EEETTTRHKVLIMEFCPCGSLYTVL 100

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 51.9 bits (125), Expect = 2e-07
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
              F     LG+G +G V K          A+KK+  T  +      +EVML A L H  
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKS 546
           ++R     ++    +     +  KS
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKS 88

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN----EVMLTAKLQ 518
           E++    K+GEG YG V+K      G+++A+KK  ++        K     E+ +  +L+
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD--PVIKKIALREIRMLKQLK 60

Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
           H NL+ +L          L++EY 
Sbjct: 61  HPNLVNLLEVFRRKRRLHLVFEYC 84

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKLQ 518
           ++R+  +  LG+G +G V        G+  AVK +SK         E    EV L  +L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 519 HVNLIRVLGFCIDSEERMLIYEY 541
           H N++++  F  D     L+ E 
Sbjct: 85  HPNIMKLYEFFEDKGYFYLVGEV 107

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 51.4 bits (124), Expect = 3e-07
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 10/88 (11%)

Query: 461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN-----EVMLT 514
           +++ +F    KLG G Y  VYKG+    G  +A+K++   S +G           E+ L 
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT----PSTAIREISLM 57

Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYM 542
            +L+H N++R+        +  L++E+M
Sbjct: 58  KELKHENIVRLYDVIHTENKLTLVFEFM 85

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 51.8 bits (124), Expect = 3e-07
 Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 6/93 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHVN 521
             + + + LG+G    V++G     G++ A+K  +  S     +    E  +  KL H N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 522 LIRVLGFCIDSEERMLIY---EYMPNKSLDCYL 551
           ++++     +           E+ P  SL   L
Sbjct: 69  IVKLFAI-EEETTTRHKVLIMEFCPCGSLYTVL 100

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 51.1 bits (123), Expect = 4e-07
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG--FEEFKNEVMLTAKLQH 519
            ER++I   LG+G +G V K       +  AVK ++K S +         EV L  KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 520 VNLIRVLGFCIDSEERMLIYEYM 542
            N++++     DS    ++ E  
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELY 103

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 51.2 bits (123), Expect = 4e-07
 Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKK--LSKTSTQGFEEFKNEVMLTAKLQHV 520
           E++    K+GEG +G          G    +K+  +S+ S++  EE + EV + A ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYF 561
           N+++      ++    ++ +Y     L   +   + +   F
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLF 122

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 51.2 bits (123), Expect = 4e-07
 Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 12/88 (13%)

Query: 463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVN 521
              ++    +G G +G V++  L   + +A+KK+ +      + FKN E+ +   ++H N
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPN 93

Query: 522 LIRVLGFCIDSEERM------LIYEYMP 543
           ++ +  F   + ++       L+ EY+P
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVP 121

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 50.0 bits (120), Expect = 7e-07
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKK--LSKTSTQGFEEFKNEVMLTAKL-Q 518
           T  F    K+G G +G V+K V    G + A+K+       +   +    EV   A L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 519 HVNLIRVLGFCIDSEERMLIY-EYMPNKSLDCYLFGLSHQKTYF 561
           H +++R      + ++ MLI  EY    SL   +       +YF
Sbjct: 70  HSHVVRYFSAWAE-DDHMLIQNEYCNGGSLADAISENYRIMSYF 112

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 50.5 bits (121), Expect = 8e-07
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
            S    LG G +G V+K      G  +A K +     +  EE KNE+ +  +L H NLI+
Sbjct: 91  VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150

Query: 525 VLGFCIDSEERMLIYEYM 542
           +        + +L+ EY+
Sbjct: 151 LYDAFESKNDIVLVMEYV 168

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVK-----KLSKTSTQGFEEFKNEVMLTAK 516
            +++ ++  +G+G YG V   +      + A+K     K+ + + +  E  K EV L  K
Sbjct: 25  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
           L H N+ R+     D +   L+ E      L
Sbjct: 85  LHHPNIARLYEVYEDEQYICLVMELCHGGHL 115

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAK 516
            +  E + +   +G G YG   K      G+++  K+L     +    +   +EV L  +
Sbjct: 2   PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61

Query: 517 LQHVNLIRVLGFCIDSEERML--IYEYMPNKSLDCYLFGLSHQKTYF 561
           L+H N++R     ID     L  + EY     L   +   + ++ Y 
Sbjct: 62  LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 49.1 bits (118), Expect = 2e-06
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 17/109 (15%)

Query: 464 ERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTSTQGFEEFKN-----EVMLTAKL 517
           E +   +KLGEG Y  VYKG       ++A+K++     +G           EV L   L
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA----PCTAIREVSLLKDL 57

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL------FGLSHQKTY 560
           +H N++ +       +   L++EY+ +K L  YL        + + K +
Sbjct: 58  KHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF 105

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVK-----KLSKTSTQGFEEFKNEVMLTAK 516
            + + +   +G+G +  V + +    G+  AVK     K + +     E+ K E  +   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYM 542
           L+H +++ +L          +++E+M
Sbjct: 83  LKHPHIVELLETYSSDGMLYMVFEFM 108

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            E++ I   LG G +G V++ V     +    K +           K E+ +    +H N
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRN 62

Query: 522 LIRVLGFCIDSEERMLIYEYM 542
           ++ +       EE ++I+E++
Sbjct: 63  ILHLHESFESMEELVMIFEFI 83

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 48.5 bits (116), Expect = 3e-06
 Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 14/102 (13%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVN 521
             F     LG GG+G V++          A+K++         E+   EV   AKL+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 522 LIRVLGFCID---------SEERMLIY---EYMPNKSLDCYL 551
           ++R     ++         S  ++ +Y   +    ++L  ++
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 48.3 bits (116), Expect = 3e-06
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEE-FKNEVMLTAKLQH 519
            R+     LG+GG+   ++       EV A K + K+        E    E+ +   L H
Sbjct: 15  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 74

Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSL 547
            +++   G   +  + + ++ E    +SL
Sbjct: 75  QHVVGFHG-FFEDNDFVFVVLELCRRRSL 102

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 48.5 bits (116), Expect = 3e-06
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEE-FKNEVMLTAKLQH 519
            R+     LG+GG+   ++       EV A K + K+        E    E+ +   L H
Sbjct: 41  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 100

Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSL 547
            +++   G   +  + + ++ E    +SL
Sbjct: 101 QHVVGFHG-FFEDNDFVFVVLELCRRRSL 128

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 48.0 bits (115), Expect = 4e-06
 Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 1/82 (1%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            + F     LG G +  V+       G++ A+K + K+        +NE+ +  K++H N
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67

Query: 522 LIRVLGFCIDSEERMLIYEYMP 543
           ++ +      +    L+ + + 
Sbjct: 68  IVTLEDIYESTTHYYLVMQLVS 89

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 21/95 (22%)

Query: 463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEE--FKN----EVMLTA 515
            +RF +    G+G +G V  G     G  +A+KK+        ++  F+N     +   A
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-------IQDPRFRNRELQIMQDLA 74

Query: 516 KLQHVNLIRVLGFCIDSEER-------MLIYEYMP 543
            L H N++++  +     ER        ++ EY+P
Sbjct: 75  VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP 109

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 47.2 bits (113), Expect = 5e-06
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQ--GFEE-FKNEVMLTAKLQH 519
           E F I   LG+G +G VY         ++A+K L K   +  G E   + EV + + L+H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            N++R+ G+  D+    LI EY P  ++
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTV 96

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 48.1 bits (114), Expect = 6e-06
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHVNL 522
            + ++ +LG GG+G V + +    GE +A+K+  +  +    E +  E+ +  KL H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 523 IRVLGFCIDSEERM-------LIYEYMPNKSLDCYL 551
           +       D  +++       L  EY     L  YL
Sbjct: 75  VS-AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 47.9 bits (114), Expect = 6e-06
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 468 IRNKLGEGGYGPVYKGV---LPCGEVIAVKKLSKTSTQGFEEFK-NEVMLTAKLQHVNLI 523
              K+G G YG VYK         +  A+K++      G       E+ L  +L+H N+I
Sbjct: 25  EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG---TGISMSACREIALLRELKHPNVI 81

Query: 524 RVLGFCIDSEER--MLIYEYM 542
            +    +   +R   L+++Y 
Sbjct: 82  SLQKVFLSHADRKVWLLFDYA 102

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 47.2 bits (113), Expect = 6e-06
 Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQH 519
           ++ + ++ +LG+G +  V + V    G   A K ++    S + F++ + E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 520 VNLIRVLGFCIDSEERMLIYEYM 542
            N++R+     +     L+++ +
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLV 87

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 47.4 bits (113), Expect = 7e-06
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 445 NRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG 503
            R++  + + +L D       F +   +G G YG VYKG  +  G++ A+K +   +   
Sbjct: 8   ARSLDEIDLSALRDPA---GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDE 63

Query: 504 FEEFKNEV-MLTAKLQHVNLIRVLG 527
            EE K E+ ML     H N+    G
Sbjct: 64  EEEIKQEINMLKKYSHHRNIATYYG 88

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 47.2 bits (113), Expect = 7e-06
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 457 ADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG------FEEFKN 509
           + +E   + + +  +LG G +  V K      G+  A K + K            EE + 
Sbjct: 1   SMVE---DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 57

Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM 542
           EV +  +++H N+I +     +  + +LI E +
Sbjct: 58  EVNILREIRHPNIITLHDIFENKTDVVLILELV 90

>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290

 Score = 47.0 bits (111), Expect = 7e-06
 Identities = 35/265 (13%), Positives = 70/265 (26%), Gaps = 49/265 (18%)

Query: 32  LNLSEVSTISGINYDLFTHLICS-----SADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
             L +  T       L  H I         +    T     S   +     K  + +K++
Sbjct: 16  TTLHDFPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKVKN-LKRR 74

Query: 87  NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG------FRGLDFAW 140
           +P +  ++SIG G     +        +    +  +S   I + Y         G+D  +
Sbjct: 75  HPEVKVVISIG-G--RGVNTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHY 131

Query: 141 TAPNTSTDMFN-IGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQ 199
               +       +G L  E +            +   L I       S   +S+      
Sbjct: 132 EHIRSDEPFATLMGQLITELK------------KDDDLNINVVSIAPSENNSSHYQKLYN 179

Query: 200 RNLNWIHAVTASYY---EPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKL 256
              ++I+ V   +    +PVST+                           +E+     K+
Sbjct: 180 AKKDYINWVDYQFSNQQKPVSTDDAFVEIF------------------KSLEKDYHPHKV 221

Query: 257 VMCLPFYGYAWTLVKPEDNGIGAAA 281
           +             K   +      
Sbjct: 222 LPGFSTDPLDTKHNKITRDIFIGGC 246

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 47.3 bits (113), Expect = 8e-06
 Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE--FKNEVMLTAKLQH 519
           TE + +  +LG+G +  V + V +  G+  A   ++       +    + E  +   L+H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 520 VNLIRVLGFCIDSEERMLIYEYM 542
            N++R+     +     LI++ +
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDLV 92

>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Length = 289

 Score = 47.0 bits (111), Expect = 8e-06
 Identities = 37/228 (16%), Positives = 75/228 (32%), Gaps = 31/228 (13%)

Query: 39  TISGINYDLFTHLICSSADIN--STTYQLSLSLPSDENQIAKFADTVKK--KNPSITTIL 94
           T+      L   ++  SA+IN  +   ++ +S   +   +        K  ++  I  IL
Sbjct: 30  TLKNSGKPLVDMVVLFSANINYDAANDKVFVSNNPNVQHLLTNRAKYLKPLQDKGIKVIL 89

Query: 95  SIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTST------- 147
           SI    D   S  +++  +++  K+F         LY   G+ F        T       
Sbjct: 90  SILGNHDR--SGIANL--STARAKAFAQELKNTCDLYNLDGVFFDDEYSAYQTPPPSGFV 145

Query: 148 --DMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWI 205
                    L  E +     +  K       L+ +    R S    +    +    +++ 
Sbjct: 146 TPSNNAAARLAYETK---QAMPNK-------LVTVYVYSRTSSFPTAVDGVNAGSYVDYA 195

Query: 206 HAVTASYYEPVSTNFTAPPAALYGSISGRFAR---STDQVLKAWIERG 250
                  Y+  +TN+     +     S  F +   +T Q L+  + +G
Sbjct: 196 IHDYGGSYDL-ATNYPGLAKSGMVMSSQEFNQGRYATAQALRNIVTKG 242

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 47.3 bits (113), Expect = 8e-06
 Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQH 519
           ++ + ++ +LG+G +  V + V    G   A K ++    S + F++ + E  +  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 520 VNLIRVLGFCIDSEERMLIYEYM 542
            N++R+     +     L+++ +
Sbjct: 88  PNIVRLHDSIQEESFHYLVFDLV 110

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 47.4 bits (113), Expect = 8e-06
 Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 14/93 (15%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK-------------TSTQGFEEFK 508
            E +    KLG G YG V            A+K + K                +  EE  
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY 541
           NE+ L   L H N+I++     D +   L+ E+
Sbjct: 95  NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEF 127

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 15/91 (16%)

Query: 463 TERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQG------FEEFKNEV 511
            + + I  +LG G +  V K    C     G   A K + K  ++        EE + EV
Sbjct: 11  EDFYDIGEELGSGQFAIVKK----CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66

Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYM 542
            +  ++ H N+I +     +  + +LI E +
Sbjct: 67  SILRQVLHHNVITLHDVYENRTDVVLILELV 97

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 47.2 bits (113), Expect = 9e-06
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 23/96 (23%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA------- 515
            ++    K+G+G +G V+K      G+ +A+KK+        E  K    +TA       
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKIL 70

Query: 516 -KLQHVNLIRVLGFCIDSEERM--------LIYEYM 542
             L+H N++ ++  C               L++++ 
Sbjct: 71  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 106

>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302

 Score = 46.8 bits (111), Expect = 1e-05
 Identities = 44/225 (19%), Positives = 73/225 (32%), Gaps = 31/225 (13%)

Query: 48  FTHLICSSADINST----TYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTN 103
           +  +  + AD  +T    T+ L  +           AD   K+      I+S+G G+   
Sbjct: 30  YDIIAVAFADATTTPGAVTFNLDSAGLGGYTVDQFKADVRAKQAAGKKVIISVG-GEKGT 88

Query: 104 YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAA 163
            S+ SS     +   +F +S   + R YGF G+D         T M            A 
Sbjct: 89  VSVNSS-----ASATNFANSVYSVMREYGFDGVDIDLENGLNPTYMTQ----------AL 133

Query: 164 TKLDAKNSTRQQSLLILTA--RFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFT 221
             L AK        +ILT   +             +     + +  V   YY   S    
Sbjct: 134 RALSAKAGPD----MILTMAPQTIDMQSTQGGYFQTALNVKDILTVVNMQYYN--SGTML 187

Query: 222 APPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYA 266
                +Y   +  F      +    +E GL+  ++ + LP    A
Sbjct: 188 GCDGKVYAQGTVDFL---TALACIQLEGGLAPSQVGLGLPASTRA 229

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGF------EEFKNEVMLTA 515
            + + I  +LG G +  V K      G   A K + K  ++        EE + EV +  
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYM 542
           ++ H N+I +     +  + +LI E +
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILELV 97

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGF------EEFKNEVMLTA 515
            + +    +LG G +  V K      G   A K + K  T+        E+ + EV +  
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYM 542
           ++QH N+I +     +  + +LI E +
Sbjct: 70  EIQHPNVITLHEVYENKTDVILILELV 96

>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 35/247 (14%), Positives = 68/247 (27%), Gaps = 22/247 (8%)

Query: 28  RVGYLNLSEVSTISGINYDLFTHLICSSADI--NSTTYQLSLSLPSDENQIAKFADTVKK 85
           + GY   S          + +  +  S        T         +D    A   +  K 
Sbjct: 19  KDGYKGGSSADFNLSSTQEGYNVINVSFMKTPEGQTLPTFKPYNKTDTEFRA---EISKL 75

Query: 86  KNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
                + ++++G G D +  +        S    F++  IR+   YGF GLD        
Sbjct: 76  NAEGKSVLIALG-GADAHIEL------KKSQESDFVNEIIRLVDTYGFDGLDIDLEQAAI 128

Query: 146 STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLL--NSIQRNLN 203
                   +            D      +  ++ +   F Y   +  Y    N++    +
Sbjct: 129 EAADNQTVI----PSALKKVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNLDSYYD 184

Query: 204 WIHA----VTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMC 259
           +I+          +     N     +         +  +   V        + A K V+ 
Sbjct: 185 FINPQYYNQGGDGFWDSDLNMWISQSNDEKKEDFLYGLTQRLVTGTDGFIKIPASKFVIG 244

Query: 260 LPFYGYA 266
           LP    A
Sbjct: 245 LPSNNDA 251

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 22/95 (23%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN---------EVM 512
            +R+ IR+ +G G YG V +        V+A+KK+          F++         E+ 
Sbjct: 52  PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI-------LRVFEDLIDCKRILREIA 104

Query: 513 LTAKLQHVNLIRVLG-FCIDSEERM----LIYEYM 542
           +  +L H ++++VL        E+     ++ E  
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA 139

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 45.8 bits (109), Expect = 3e-05
 Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE--------FKNEVML 513
            + + +   LG G  G V         + +A++ +SK                 + E+ +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMP 543
             KL H  +I++  F  D+E+  ++ E M 
Sbjct: 194 LKKLNHPCIIKIKNF-FDAEDYYIVLELME 222

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE--------FKNEVML 513
            + + +   LG G  G V         + +A+K +SK                 + E+ +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMP 543
             KL H  +I++  F  D+E+  ++ E M 
Sbjct: 69  LKKLNHPCIIKIKNF-FDAEDYYIVLELME 97

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 45.0 bits (107), Expect = 5e-05
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 16/96 (16%)

Query: 463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE--FKN---------EV 511
              ++++  +  G YG V  GV   G  +A+K++  T + G       +         E+
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80

Query: 512 MLTAKLQHVNLIRVLG-FCIDSEERM----LIYEYM 542
            L     H N++ +   F    E  M    L+ E M
Sbjct: 81  RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM 116

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 44.7 bits (105), Expect = 5e-05
 Identities = 17/119 (14%), Positives = 30/119 (25%), Gaps = 7/119 (5%)

Query: 415 NQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGE 474
            + + L     + A            A  + +N     V SL        +  +   L  
Sbjct: 16  KREEELIGYCREEALKEPAAMVEAVTATVWPQNAE-TTVDSLLS--QGERKLKLVEPLRV 72

Query: 475 GGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
           G    V+    +   E  A+K  +     S    E         A+L   +        
Sbjct: 73  GDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRR 131

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 2/74 (2%)

Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNL 522
           R  +R  L EGG+  VY+   +  G   A+K+L     +       EV    KL  H N+
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88

Query: 523 IRVLGFCIDSEERM 536
           ++        +E  
Sbjct: 89  VQFCSAASIGKEES 102

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 44.5 bits (106), Expect = 5e-05
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 20/98 (20%)

Query: 462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA----- 515
           AT R+    ++G G YG VYK      G  +A+K +   +          + ++      
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG---GGGGGGLPISTVREVA 63

Query: 516 ------KLQHVNLIRVLGFCIDSEER-----MLIYEYM 542
                   +H N++R++  C  S         L++E++
Sbjct: 64  LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 101

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 44.8 bits (106), Expect = 5e-05
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEV-MLTAKLQHVNLI 523
            F  ++ LG G  G +    +     +AVK++     + F     EV +L    +H N+I
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP---ECFSFADREVQLLRESDEHPNVI 81

Query: 524 RVLGFCIDSEERMLIYEYMP 543
           R      D + + +  E   
Sbjct: 82  RYFCTEKDRQFQYIAIELCA 101

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 43.7 bits (104), Expect = 7e-05
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEE-FKNEVMLTAKLQH 519
           E F + N LG+G +  VY+   +  G  +A+K + K +    G  +  +NEV +  +L+H
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            +++ +  +  DS    L+ E   N  +
Sbjct: 71  PSILELYNYFEDSNYVYLVLEMCHNGEM 98

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 44.1 bits (103), Expect = 9e-05
 Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 24/126 (19%)

Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST--------QGFEEFKNEVML 513
            TE+     K+GEG +G V++ +      +A+K ++            + FEE   E+++
Sbjct: 18  PTEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 514 TAKLQ---------HVNLIRVLGFCI----DSEERMLIYEYMPNK--SLDCYLFGLSHQK 558
           + +L              I +              +  +++  +   S +         +
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 559 TYFGLE 564
            +  LE
Sbjct: 137 LFIVLE 142

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 18/97 (18%), Positives = 43/97 (44%), Gaps = 24/97 (24%)

Query: 464 ERFSIRNKLGEGGYGPVYKG--VLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA------ 515
           +++    ++GEG YG V+K   +   G  +A+K++        +  +  + L+       
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR------VQTGEEGMPLSTIREVAV 64

Query: 516 -----KLQHVNLIRVL----GFCIDSEERM-LIYEYM 542
                  +H N++R+         D E ++ L++E++
Sbjct: 65  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 101

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEE-FKNEVMLTAKLQH 519
           + F I   LG+G +G VY         ++A+K L K+    +G E   + E+ + + L+H
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSL 547
            N++R+  +  D +   L+ E+ P   L
Sbjct: 74  PNILRMYNYFHDRKRIYLMLEFAPRGEL 101

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 7/69 (10%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKL 517
           E +++++S+   LG G +G V +   +  G+  A+KK+ +        +KN E+ +   L
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ-----DPRYKNRELDIMKVL 57

Query: 518 QHVNLIRVL 526
            HVN+I+++
Sbjct: 58  DHVNIIKLV 66

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 17/80 (21%), Positives = 25/80 (31%), Gaps = 4/80 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEV-MLTAKLQHVNL 522
                   LG G  G V       G  +AVK++        +    E+ +LT    H N+
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNV 71

Query: 523 IRVLGFCIDSEERMLIYEYM 542
           IR            +  E  
Sbjct: 72  IRYYCSETTDRFLYIALELC 91

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 469 RNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVL 526
            + LGEG +  V   + L   +  AVK + K           EV +  + Q H N++ ++
Sbjct: 18  EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77

Query: 527 GFCIDSEERMLIYEYM 542
            F  + +   L++E M
Sbjct: 78  EFFEEEDRFYLVFEKM 93

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           T+ + ++  +G G Y    + +        AVK + K+     EE   E++L    QH N
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE--IEILLR-YGQHPN 77

Query: 522 LIRVLGFCIDSEERMLIYEYM 542
           +I +     D +   ++ E M
Sbjct: 78  IITLKDVYDDGKYVYVVTELM 98

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 19/99 (19%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN---------EVM 512
             R+     LG GG G V+  V   C + +A+KK+            +         E+ 
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---------LTDPQSVKHALREIK 60

Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           +  +L H N+++V      S  ++        +    Y+
Sbjct: 61  IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYI 99

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 22/95 (23%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN---------EVM 512
            + + I++ +G G YG VY        + +A+KK+++        F++         E+ 
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-------FEDLIDCKRILREIT 77

Query: 513 LTAKLQHVNLIRVLG-FCIDSEERM----LIYEYM 542
           +  +L+   +IR+      D   +     ++ E  
Sbjct: 78  ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA 112

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
           ++ F + ++LG G    VY+       +  A+K L KT  +  +  + E+ +  +L H N
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109

Query: 522 LIRVLGFCIDSEERMLIYEYM 542
           +I++        E  L+ E +
Sbjct: 110 IIKLKEIFETPTEISLVLELV 130

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 2/89 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVN 521
             F     +G GG+G V++          A+K++         E+   EV   AKL+H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
           ++R     +++       E       D  
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDES 94

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HV 520
            + + +  KLG G Y  V++ + +   E + VK L     +   + K E+ +   L+   
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK---KIKREIKILENLRGGP 91

Query: 521 NLIRVLGFCIDSEERM--LIYEYMPNKSL 547
           N+I +     D   R   L++E++ N   
Sbjct: 92  NIITLADIVKDPVSRTPALVFEHVNNTDF 120

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 465 RFSIRNKLGEGGYGPVYKG---VLPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHV 520
           ++ ++  +  GG G +Y      +  G  + +K L  +     +     E    A++ H 
Sbjct: 81  QYEVKGCIAHGGLGWIYLALDRNVN-GRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHP 139

Query: 521 NLIRVL--GFCIDSEERMLIY---EYMPNKSL 547
           +++++       D     + Y   EY+  +SL
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL 171

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 23/95 (24%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN---------EVM 512
             R++  + +GEG YG V           +A+KK+S         F++         E+ 
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--------FEHQTYCQRTLREIK 77

Query: 513 LTAKLQHVNLIRVLG-FCIDSEERM----LIYEYM 542
           +  + +H N+I +       + E+M    ++ + M
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 11/89 (12%), Positives = 30/89 (33%), Gaps = 8/89 (8%)

Query: 465 RFSIRNKLGEGGYGPVYKG---VLPCGEVIAVKKL--SKTSTQGF-EEFKNEVMLTAKLQ 518
           R+ +    G       ++     L     +A+  +           +E  +  +  +++ 
Sbjct: 32  RYRLLIFHGGVPPLQFWQALDTAL--DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID 89

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
              + RVL         +++ E++   SL
Sbjct: 90  KPGVARVLDVVHTRAGGLVVAEWIRGGSL 118

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 6e-04
 Identities = 73/481 (15%), Positives = 136/481 (28%), Gaps = 107/481 (22%)

Query: 157 DEWRIAATK------LDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTA 210
           D  +   +K      + +K++      L  T   +       ++   ++ N  ++     
Sbjct: 40  DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL----- 94

Query: 211 SYYEPVSTNFTAP--PAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWT 268
               P+ T    P     +Y     R         K  + R     KL   L        
Sbjct: 95  --MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL-------L 145

Query: 269 LVKPEDN-------GIGAAA-AGPALYDSGLVTYKKIKNHI------KTYGPDVQV-MYN 313
            ++P  N       G G    A        +    K+   I          P+  + M  
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ--CKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 314 STY---EVNYFSTGTVWFGFDDVEAVRAKIAYAKE--KRLLGYYAWQVSF---DD--HDW 363
                 + N+ S        D    ++ +I   +   +RLL    ++       +  +  
Sbjct: 204 KLLYQIDPNWTSRS------DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK 257

Query: 364 LLSQAAAQ-KDSITS--ASVDKDEHSSNRRLSIALIS-----TAAAALTLLLGCCAYKYN 415
             +      K  +T+    V  D  S+     I+L       T     +LLL     KY 
Sbjct: 258 AWNAFNLSCKILLTTRFKQV-TDFLSAATTTHISLDHHSMTLTPDEVKSLLL-----KYL 311

Query: 416 QMKRLNLIEEDSAKASNTRANNETEAGDFNRNVP----NLRVYSLADIEAATERFSIRNK 471
             +  +L  E     +N R  +     +  R+      N +  +   +    E  S+ N 
Sbjct: 312 DCRPQDLPRE--VLTTNPRRLSI--IAESIRDGLATWDNWKHVNCDKLTTIIES-SL-NV 365

Query: 472 LGEGGYGPVYK--GVLPCGEVIAVKKLS----KTSTQGFEEFKNEVM---LTAKLQHVNL 522
           L    Y  ++    V P    I    LS               N++    L  K    + 
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425

Query: 523 IRVLGFCIDSEE---------RMLIYEYMPNKSLDCYLFGLSHQKTYF----GLEKTCSY 569
           I +    ++ +          R ++  Y   K+ D       +   YF    G      +
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG------H 479

Query: 570 H 570
           H
Sbjct: 480 H 480

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 6e-04
 Identities = 59/387 (15%), Positives = 107/387 (27%), Gaps = 151/387 (39%)

Query: 6   ISIIFHTLLYSEL---HPAKAKPWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTT 62
           +SII      +E      A    W  V              N D  T +I SS +     
Sbjct: 330 LSII------AESIRDGLATWDNWKHV--------------NCDKLTTIIESSLN----- 364

Query: 63  YQLSLSLPSDENQ-----IAKFADTVKKKNPSITT-ILSIGQGKDTNYSIYSSMVRNSSH 116
                 L   E +     ++ F  +       I T +LS+         +   +V N  H
Sbjct: 365 -----VLEPAEYRKMFDRLSVFPPSAH-----IPTILLSLIWFDVIKSDV--MVVVNKLH 412

Query: 117 RKSFID-----SSIRIARLYGFRGLDFAWTAPNTST------DMFNIGLLFDEWRIAATK 165
           + S ++     S+I I  +Y    L+      N         D +NI   FD   +    
Sbjct: 413 KYSLVEKQPKESTISIPSIY----LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468

Query: 166 LDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPA 225
           LD                         Y  + I       H     + E ++  F     
Sbjct: 469 LD------------------------QYFYSHIGH-----HLKNIEHPERMTL-FR---- 494

Query: 226 ALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPA 285
            ++                 ++E+ +  D           AW           + +    
Sbjct: 495 MVFLDFR-------------FLEQKIRHD---------STAWN---------ASGSILNT 523

Query: 286 LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKE 345
           L    L  YK    +I    P  + + N+  +   F           +  +   +  +K 
Sbjct: 524 LQQ--LKFYKP---YICDNDPKYERLVNAILD---F-----------LPKIEENLICSKY 564

Query: 346 KRLLGYYAWQVSF-DDHDWLLSQAAAQ 371
             LL     +++   + + +  +A  Q
Sbjct: 565 TDLL-----RIALMAEDEAIFEEAHKQ 586

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 41.2 bits (97), Expect = 7e-04
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 427 SAKASNTRANNETEAGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGV-L 485
            AK  N      TE   F    P   +   A  +   +++  ++ +G G    V + V  
Sbjct: 57  EAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHR 116

Query: 486 PCGEVIAVKKLSKTSTQG--------FEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM 536
             G   AVK +  T+ +          E  + E  +  ++  H ++I ++     S    
Sbjct: 117 ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMF 176

Query: 537 LIYEYMP 543
           L+++ M 
Sbjct: 177 LVFDLMR 183

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 463 TERFSIRNK-LGEGGYGPVYKGV-LPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQ 518
              + + +K LG G +  V + +    G+  A K  K  +       E  +E+ +    +
Sbjct: 27  NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86

Query: 519 HV-NLIRVLGFCIDSEERMLIYEYM 542
               +I +     ++ E +LI EY 
Sbjct: 87  SCPRVINLHEVYENTSEIILILEYA 111

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 40.7 bits (96), Expect = 9e-04
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 23/95 (24%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN---------EVM 512
           +  F +++ LGEG YG V      P GE++A+KK+          F           E+ 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--------FDKPLFALRTLREIK 61

Query: 513 LTAKLQHVNLIRVLG-FCIDSEERM----LIYEYM 542
           +    +H N+I +      DS E      +I E M
Sbjct: 62  ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM 96

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	570
4ay1_A	365	Chitinase-3-like protein 2; chilectin, lectin, chi	100.0
3aqu_A	356	AT4G19810; stress response, TIM barrel, hydrolase,	100.0
3alf_A	353	Chitinase, class V; hydrolase; 1.20A {Nicotiana ta	100.0
3fy1_A	395	Amcase, TSA1902, acidic mammalian chitinase; struc	100.0
1vf8_A	377	YM1, secretory protein; chitinase, CHI-lectin, str	100.0
1wb0_A	445	Chitinase 1, chitotriosidase 1; cyclopentapeptide	100.0
2pi6_A	361	Chitinase-3-like protein 1; complex, signaling pro	100.0
1itx_A	419	Chitinase A1, glycosyl hydrolase; alpha-beta (TIM)	100.0
3qok_A	420	Putative chitinase II; structural genomics, PSI-bi	100.0
1jnd_A	420	Imaginal DISC growth factor-2; IDGF, chitinase, in	100.0
1kfw_A	435	Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob	100.0
3g6m_A	406	Chitinase, crchi1; inhibitor, caffeine, glycosidas	100.0
1goi_A	499	Chitinase B; chitin degradation, hydrolase, glycos	100.0
1edq_A	540	Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1	100.0
3arx_A	584	Chitinase A; TIM barrel, inhibitor complex, glycos	100.0
1ll7_A	392	Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {	100.0
1w9p_A	433	Chitinase; peptide inhibitors, argifin, argadin, g	100.0
3oa5_A	574	CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers	100.0
3cz8_A	319	Putative sporulation-specific glycosylase YDHD; st	100.0
3fnd_A	312	Chitinase; TIM-barrel, structural genomics, PSI-2,	100.0
3bxw_B	393	Chitinase domain-containing protein 1; TIM barrel,	100.0
1nar_A	290	Narbonin; plant SEED protein; 1.80A {Vicia narbone	100.0
3sim_A	275	Protein, family 18 chitinase; family 18 plant chit	100.0
3n12_A	333	Chitinase A, chinctu2; zinc atoms, complex, hydrol	100.0
2y8v_A	290	CHIC, class III chitinase, putative; afchic, hydro	100.0
4axn_A	328	Chitinase C1; hydrolase; 1.68A {Serratia marcescen	100.0
3ebv_A	302	Chinitase A; chitinase A, CHIA, glycosidase, struc	100.0
3ian_A	321	Chitinase; structural genomics, hydrolase, glycosi	100.0
4ac1_X	283	Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g	100.0
2hvm_A	273	Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He	99.97
1edt_A	271	Endo-beta-N-acetylglucosaminidase H, endo H; hydro	99.97
2uy2_A	294	Endochitinase; carbohydrate metabolism, polysaccha	99.97
2gsj_A	271	Protein PPL-2; mimosoideae, chimerolectin, endochi	99.96
1eok_A	290	Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b	99.95
1cnv_A	299	Concanavalin B; plant chitinase, chitin binding pr	99.94
2xtk_A	310	CHIA1, class III chitinase CHIA1; hydrolase, GH18;	99.94
2ebn_A	289	Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl	99.94
1ta3_A	274	XIP-1, xylanase inhibitor protein I; beta alpha ba	99.9
3poh_A	451	Endo-beta-N-acetylglucosaminidase F1; TIM barrel,	99.83
3mu7_A	273	XAIP-II, xylanase and alpha-amylase inhibitor prot	99.83
2dsk_A	311	Chitinase; catalytic domain, active domain, crysta	99.82
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.69
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.68
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.66
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.58
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.57
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.54
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.54
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.52
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.5
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.5
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.49
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.45
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.44
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.44
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.4
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.36
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.33
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.32
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.3
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.27
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.24
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.23
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.2
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.19
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.19
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.19
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.18
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.18
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.18
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.18
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.18
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.18
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.18
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.17
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.17
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.17
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.17
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.17
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.17
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.17
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.17
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.16
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.16
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.16
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.16
3uqc_A	286	Probable conserved transmembrane protein; structur	99.15
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.15
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.15
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.15
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.14
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.14
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.14
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.14
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.14
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.13
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.13
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.13
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.13
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.13
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.13
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.12
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.12
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.11
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.11
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.11
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.11
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.11
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.1
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.1
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.1
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.1
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.1
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.08
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.08
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.07
3bhy_A	283	Death-associated protein kinase 3; death associate	99.06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.06
3niz_A	311	Rhodanese family protein; structural genomics, str	99.05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.04
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.03
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.03
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.03
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.03
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.02
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.02
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.02
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.02
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.02
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.02
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.02
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.01
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.01
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.01
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.01
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.01
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.01
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.01
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.01
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.01
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.99
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.99
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.99
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.99
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.99
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.99
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.99
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.98
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.97
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.97
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.96
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.95
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.95
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.94
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.94
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.94
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.94
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.93
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.92
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.92
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.92
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.92
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.92
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.92
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.92
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.92
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.9
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.9
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.9
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.9
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.89
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.89
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.89
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.89
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.88
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.88
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.88
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.87
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.87
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.87
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.86
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.86
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.86
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.85
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.85
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.84
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.83
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.83
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.82
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.82
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.81
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.81
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.81
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.8
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.79
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.79
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.78
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.78
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.78
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.78
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.77
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.77
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.77
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.77
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.77
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.76
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.76
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.76
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.76
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.76
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.75
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.75
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.75
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.74
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.74
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.73
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.72
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.71
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.69
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.69
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.66
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.66
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.62
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.61
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.61
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.6
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.56
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.56
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.56
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.54
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.53
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.53
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.53
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.45
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.23
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.82
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.62
2vtf_A	626	Endo-beta-N-acetylglucosaminidase; hydrolase, fami	97.55
2w91_A	653	Endo-beta-N-acetylglucosaminidase D; hydrolase, N-	97.45
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.45
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.77
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.62
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	95.46
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.79
3gdb_A	937	Endo-D, putative uncharacterized protein SPR0440;	91.02
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	90.16
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	87.72
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	85.75
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	81.72

>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.3e-68  Score=542.50  Aligned_cols=327  Identities=27%  Similarity=0.413  Sum_probs=273.7

Q ss_pred             eEEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcC
Q 008332           26 WIRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ   98 (570)
Q Consensus        26 ~~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg   98 (570)
                      .++||||++|+       .+.+++||+++||||+|+|+.+++++.  ...+..+...+..+ ..+|++||++|+++||||
T Consensus         2 ~rvV~Yy~~W~~~r~~~~~~~~~~i~~~~~THi~yaFa~i~~~~~--~~~~~~~~~~~~~~-~~lK~~~p~lKvllSiGG   78 (365)
T 4ay1_A            2 YKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKV--IIKDKSEVMLYQTI-NSLKTKNPKLKILLSIGG   78 (365)
T ss_dssp             CEEEEEEESGGGGSCTTSCCCGGGCCTTTCSEEEEEEEEEETTEE--ECCCTTHHHHHHHH-HHHHHHCTTCEEEEEEEE
T ss_pred             eEEEEEECCccccCCCCCCCChhHCCcccCCEEEEEeEEecCCee--EECCccHHHHHHHH-HHHHHHCCCCEEEEEEeC
Confidence            58999999995       478999999999999999999998852  23334444445555 569999999999999999


Q ss_pred             CCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceE
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLL  178 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~  178 (570)
                      |+. ++..|+.+++++++|++||+|+++||++|+||||||||||| ...++.+|+.|+++||+++++...+..   +..+
T Consensus        79 w~~-~s~~Fs~~~~~~~~R~~Fi~siv~~~~~~~fDGiDiDWEyP-~~~d~~~~~~ll~elr~~~~~~~~~~~---~~~~  153 (365)
T 4ay1_A           79 YLF-GSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYP-DQKENTHFTVLIHELAEAFQKDFTKST---KERL  153 (365)
T ss_dssp             TTT-TTGGGTTGGGSHHHHHHHHHHHHHHHHHTTCCEEEEEESCC-HHHHHHHHHHHHHHHHHHHHHHHHTCS---SCCC
T ss_pred             CCC-CCchHHHHHcCHHHHHHHHHHHHHHHHhcCCceEEEeeecC-CcccccccHHHHHHHHHHHHHHHhhhc---cCce
Confidence            875 56779999999999999999999999999999999999999 457889999999999999875432221   3345


Q ss_pred             EEEeecccCCC--CCccChHHHhhhhceeeeecccCCCCCCCC-CCCCCCCCCCCCCCC---CccCHHHHHHHHHHcCCC
Q 008332          179 ILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTN-FTAPPAALYGSISGR---FARSTDQVLKAWIERGLS  252 (570)
Q Consensus       179 ~~~~~~~~~~~--~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~-~~~~~a~l~~~~~~~---~~~~v~~~v~~~~~~gvp  252 (570)
                      .++++++....  ...||++++.++|||||||+||+||+|+.. .+||+|||+......   ...+++.+|++|+++|+|
T Consensus       154 ~lt~a~~~~~~~~~~~~d~~~i~~~vD~inlMtYD~~g~w~~~~~tg~~apL~~~~~~~~~~~~~~v~~av~~~~~~gvp  233 (365)
T 4ay1_A          154 LLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMP  233 (365)
T ss_dssp             EEEEEEECCHHHHHHHCCHHHHHHHCSEEEEECCCSSCTTCSSCBCCCSSCSSCCTTCCGGGGGSSHHHHHHHHHHTTCC
T ss_pred             EEEeecCCChhhhhhhcchhhhhhcccEEEEEcccccCcccCCCcCCCCCCCCCCccccCccccccHHHHHHHHHHcCCC
Confidence            55665554432  246999999999999999999999999865 689999999765432   345899999999999999


Q ss_pred             CCceeeeccccccceeccCCCCCC----CCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEE
Q 008332          253 ADKLVMCLPFYGYAWTLVKPEDNG----IGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWF  328 (570)
Q Consensus       253 ~~KlvlGip~yG~~~~~~~~~~~~----~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i  328 (570)
                      ++||+||||||||.|+++++.+..    .+....|+++.+.|.++|.|+|..++.    ....|+..+..||...+++||
T Consensus       234 ~~KlvlGip~YGr~~~~~~~~~~~~~~~~~~~~~g~~t~~~g~~~y~e~~~~~~~----~~~~~~~~~~~~y~~~~~~~v  309 (365)
T 4ay1_A          234 SEKVVMGIPTYGHSFTLASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKG----AKITRLQDQQVPYAVKGNQWV  309 (365)
T ss_dssp             GGGEEEEEESEEEEEEESSSCCSTTCBEEEECCCCTTTCCTTEEEHHHHHHHHTT----CEEEECTTTCCEEEEETTEEE
T ss_pred             HHHeeeccCccceeeeecCCCCCCCCcccCCCCCccccccCCeeeHHHHHHHhcC----CceEEecCCeeEEEEECCEEE
Confidence            999999999999999998765432    122345677889999999999998754    456778888889999999999


Q ss_pred             eccCHHHHHHHHHhhhccCCceEEEEEccccChhhH
Q 008332          329 GFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL  364 (570)
Q Consensus       329 ~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~  364 (570)
                      +|||++|+++|++||+++||||+|+|+|++||++..
T Consensus       310 sydd~~Si~~K~~y~~~~~LgGv~~W~l~~DD~~G~  345 (365)
T 4ay1_A          310 GYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGK  345 (365)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCSEEEEECGGGSCTTST
T ss_pred             EeCCHHHHHHHHHHHHhcCCCEEEEEeCCCcCCCCC
Confidence            999999999999999999999999999999998753

>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana}

Probab=100.00  E-value=4.1e-68  Score=536.45  Aligned_cols=337  Identities=38%  Similarity=0.705  Sum_probs=293.7

Q ss_pred             CeEEEEEecCCCCCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCc
Q 008332           25 PWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY  104 (570)
Q Consensus        25 ~~~vvgY~~~~~~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~  104 (570)
                      .++++|||-+...+.+++||+++||||+|+|+.++++++.+...+. ++..+.++++.+|+++|++|+++|||||.. ++
T Consensus         3 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~-~~~~~~~~~~~lk~~~~~lkvllsiGGw~~-~~   80 (356)
T 3aqu_A            3 TVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSA-NQPKFSTFTQTVQRRNPSVKTLLSIGGGIA-DK   80 (356)
T ss_dssp             CCEEEEEECGGGCCCGGGSCGGGCSEEEEEEEEEETTTTEEECCTT-THHHHHHHHHHHTTTCTTCEEEEEEECTTS-CH
T ss_pred             ceEEEEEEeCCCCCCHHHCCcccCCEEEEEEEEecCCCCEEEeCCc-cHHHHHHHHHHHHhhCCCceEEEEECCCCC-Cc
Confidence            4789999922247899999999999999999999998778877654 356688888889999999999999999874 46


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeec
Q 008332          105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARF  184 (570)
Q Consensus       105 ~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~  184 (570)
                      ..|+.+++++++|++||+++++++++|+|||||||||||+.++|+.+|+.|+++||++|+......+   ...+++++++
T Consensus        81 ~~f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~~g---~~~~~Ls~av  157 (356)
T 3aqu_A           81 TAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSG---KPRLLLAAAV  157 (356)
T ss_dssp             HHHHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHC---SCCCEEEEEE
T ss_pred             chHHHHhcCHHHHHHHHHHHHHHHHHhCCCeEEEEEeecCChhHHHHHHHHHHHHHHHHHHhhhhcC---CCceEEEEec
Confidence            7899999999999999999999999999999999999997778999999999999999986433222   2234555555


Q ss_pred             ccCC--CCCccChHHHhhhhceeeeecccCCCC-CCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCceeeecc
Q 008332          185 RYSP--PANSYLLNSIQRNLNWIHAVTASYYEP-VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLP  261 (570)
Q Consensus       185 ~~~~--~~~~~~~~~l~~~vD~i~vm~yd~~~~-~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip  261 (570)
                      +..+  ....|+++++.+++||||||+||+||+ |. ..+||+|||++...  ...+++.+|++|++.|+|++||+||||
T Consensus       158 ~~~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~~w~-~~~g~~apl~~~~~--~~~~v~~~v~~~~~~gvp~~KlvlGip  234 (356)
T 3aqu_A          158 FYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWS-RVTGPPAALFDPSN--AGPSGDAGTRSWIQAGLPAKKAVLGFP  234 (356)
T ss_dssp             ESSSEETTEECCHHHHHHHCSEEEEECCCCCCTTTC-SBCCCTTCSCCTTC--SSCCHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred             cCCchhhhccCCHHHHhhhccEEEEEeeecccCCCC-CCcCCCCcCCCCCC--CCccHHHHHHHHHHcCCCHHHEEEEec
Confidence            4332  235799999999999999999999998 76 57999999996543  256999999999999999999999999


Q ss_pred             ccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHHHHH
Q 008332          262 FYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIA  341 (570)
Q Consensus       262 ~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~K~~  341 (570)
                      +|||.|++.++.++++|++..|+++.++|.++|.|||+.+...+  ++..||+.+..||...+++||+|||++|+++|++
T Consensus       235 ~YGr~~~~~~~~~~~~~~p~~g~~~~~~g~~~y~ei~~~l~~~g--~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~  312 (356)
T 3aqu_A          235 YYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVR  312 (356)
T ss_dssp             SEEEEEEESCTTCCSTTCBEEEECSSTTCEEEHHHHHHHHHHHT--CEEEEETTTTEEEEEETTEEEEECCHHHHHHHHH
T ss_pred             cceeeeEecCCcCCCCCCCCCCCCCCCCCeeeHHHHHHHHhcCC--CeEEEchhhceEEEEeCCEEEEeCCHHHHHHHHH
Confidence            99999999998889999999999888899999999999888776  8899999999999988899999999999999999


Q ss_pred             hhhccCCceEEEEEccccChhhHHHHhhhcc
Q 008332          342 YAKEKRLLGYYAWQVSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       342 ~~~~~gLgGv~~W~l~~Dd~~~~~~~~~~~~  372 (570)
                      |++++||||+|+|++++|| .|.+++++.+.
T Consensus       313 ~~~~~gLgGv~~W~l~~Dd-~~~ll~a~~~~  342 (356)
T 3aqu_A          313 YAKQRGLLGYFSWHVGADD-NSGLSRAASQA  342 (356)
T ss_dssp             HHHHTTCCEEEEECGGGSS-TTHHHHHHHHH
T ss_pred             HHHhCCCCeEEEEeccCCC-CchHHHHHHHH
Confidence            9999999999999999987 67888888764

>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A*

Probab=100.00  E-value=3.2e-68  Score=537.11  Aligned_cols=337  Identities=39%  Similarity=0.714  Sum_probs=292.1

Q ss_pred             CeEEEEEecCCCCCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCc
Q 008332           25 PWIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY  104 (570)
Q Consensus        25 ~~~vvgY~~~~~~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~  104 (570)
                      +++++|||-+...+++++||+++||||+|+|+.++++++.+...+. ++..+.++++.+|+++|++|+++|||||.. ++
T Consensus         2 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~-~~~~~~~~~~~lk~~~~~lkvllsiGG~~~-~~   79 (353)
T 3alf_A            2 QNVKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPE-NQDSFRQFTSTVQRKNPSVKTFLSIAGGRA-NS   79 (353)
T ss_dssp             CCEEEEEEEGGGCCCGGGCCGGGCSEEEEEEEEEETTTTEEECCHH-HHHHHHHHHHHHHHHCTTCEEEEEEECTTS-CH
T ss_pred             CceEEEEEecCCCCCHhHCCcccCCEEEEEEEEeeCCCCEEEeCCc-cHHHHHHHHHHHHhhCCCCeEEEEECCCCC-Cc
Confidence            4789999933347899999999999999999999998777776632 345678888889999999999999999874 46


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeec
Q 008332          105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARF  184 (570)
Q Consensus       105 ~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~  184 (570)
                      ..|+.+++++++|++||+++++++++|+|||||||||||..++|+.+|+.|+++||++|+.......   ...+++++++
T Consensus        80 ~~f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~~~---~~~~~Ls~a~  156 (353)
T 3alf_A           80 TAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAINTEARNSG---RAALLLTAAV  156 (353)
T ss_dssp             HHHHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHC---SCCCEEEEEE
T ss_pred             hhHHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEEeeecCChhHHHHHHHHHHHHHHHHHHhhhhcC---CCceEEEEec
Confidence            7899999999999999999999999999999999999997778999999999999999986433221   2234555555


Q ss_pred             ccCC--CCCccChHHHhhhhceeeeecccCCCC-CCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCCCceeeecc
Q 008332          185 RYSP--PANSYLLNSIQRNLNWIHAVTASYYEP-VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLP  261 (570)
Q Consensus       185 ~~~~--~~~~~~~~~l~~~vD~i~vm~yd~~~~-~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip  261 (570)
                      +..+  ....|+++++.+++||||||+||+||+ |....+||+|||++...   ..+++.+|++|++.|+|++||+||||
T Consensus       157 ~~~~~~~~~~~d~~~l~~~vD~invMtYD~~g~~w~~~~~g~~a~l~~~~~---~~~~~~~v~~~~~~gvp~~KlvlGip  233 (353)
T 3alf_A          157 SNSPRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSGSDGINAWIQAGVPTKKLVLGIP  233 (353)
T ss_dssp             ESSSEETTEECCHHHHHHHCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTT---CCSHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred             ccCchhhhcCCCHHHHhhhccEEEEEEeeccCCCCCCCCCCCCCcCcCCCC---CccHHHHHHHHHHcCCChHHEEEEeC
Confidence            5332  235699999999999999999999998 77567999999996543   45999999999999999999999999


Q ss_pred             ccccceeccCCCCCCCCCCCCCC---CCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHH
Q 008332          262 FYGYAWTLVKPEDNGIGAAAAGP---ALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRA  338 (570)
Q Consensus       262 ~yG~~~~~~~~~~~~~g~~~~g~---~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~  338 (570)
                      +|||.|+++++.+++++++..|+   ++.++|.++|.|||+.+...+  ++..||+.+..||...+++||+|||++|++.
T Consensus       234 ~YGr~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~y~ei~~~~~~~g--~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~  311 (353)
T 3alf_A          234 FYGYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESR--ATTVYNATIVGDYCYSGSNWISYDDTQTVRN  311 (353)
T ss_dssp             SEEEEEEESCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHT--CEEEEETTTTEEEEEETTEEEEECCHHHHHH
T ss_pred             CceeeeeccCCcCCCCCCCCCCCCCCCCCCCCeEcHHHHHHHHhhCC--CeEEEccccceEEEEeCCEEEEcCCHHHHHH
Confidence            99999999998888999887776   667789999999999888766  8899999999999988999999999999999


Q ss_pred             HHHhhhccCCceEEEEEccccChhhHHHHhhhcc
Q 008332          339 KIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       339 K~~~~~~~gLgGv~~W~l~~Dd~~~~~~~~~~~~  372 (570)
                      |++|++++||||+|+|++++|| .|.+++++.+.
T Consensus       312 K~~~~~~~gLgGv~~W~l~~Dd-~~~ll~a~~~~  344 (353)
T 3alf_A          312 KVNYVKGRGLLGYFAWHVAGDQ-NWGLSRTASQT  344 (353)
T ss_dssp             HHHHHHHTTCSEEEEECGGGSS-TTHHHHHHHHH
T ss_pred             HHHHHHhCCCCEEEEEeccCCC-CchHHHHHHHH
Confidence            9999999999999999999987 67787887754

>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A*

Probab=100.00  E-value=1.2e-67  Score=539.46  Aligned_cols=335  Identities=27%  Similarity=0.445  Sum_probs=284.4

Q ss_pred             eEEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcC
Q 008332           26 WIRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ   98 (570)
Q Consensus        26 ~~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg   98 (570)
                      .++||||++|+       .+.+++||+++||||+|+|+.++ ++ .+...+..+...+.++. .||+++|++|+++||||
T Consensus         1 ~~~v~Yy~~W~~~r~~~~~~~~~~i~~~~~THi~yaFa~i~-~~-~i~~~~~~d~~~~~~~~-~lK~~~p~lKvllSiGG   77 (395)
T 3fy1_A            1 YQLTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIYAFAGMQ-NN-EITTIEWNDVTLYQAFN-GLKNKNSQLKTLLAIGG   77 (395)
T ss_dssp             CEEEEEEETTGGGSCGGGCCCGGGSCTTTCSEEEEEEEEEE-TT-EEECCSTTHHHHHHHHH-HGGGSCTTCEEEEEEEC
T ss_pred             CEEEEEECcccccCCCCCCCChhHCCcccCCEEEEEEEEee-CC-eeEecccccHHHHHHHH-HHHHhCCCCEEEEEEcC
Confidence            37899999996       36799999999999999999999 44 66555544555666664 59999999999999999


Q ss_pred             CCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCC----CCccchhhhHHHHHHHHhhhhhcccccc
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS----TDMFNIGLLFDEWRIAATKLDAKNSTRQ  174 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~----~~~~~~~~l~~~lr~~l~~~~~~~~~~~  174 (570)
                      |+. ++..|+.+++++++|++||++++++|++|+|||||||||||+..    +|+.+|+.|+++||++|+....+.+   
T Consensus        78 w~~-~s~~f~~~~~~~~~R~~fi~siv~~l~~~gfDGiDiDwEyP~~~g~~~~d~~nf~~ll~eLr~~l~~~~~~~~---  153 (395)
T 3fy1_A           78 WNF-GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQIN---  153 (395)
T ss_dssp             GGG-CSHHHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCC-CCchhhHHhCCHHHHHHHHHHHHHHHHhcCCCeEEEEeEcCCCCCCChhHHHHHHHHHHHHHHHHHHhhhccC---
Confidence            875 56789999999999999999999999999999999999999653    5889999999999999986533221   


Q ss_pred             cceEEEEeecccCCC--CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCC---ccCHHHHHHHHHHc
Q 008332          175 QSLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRF---ARSTDQVLKAWIER  249 (570)
Q Consensus       175 ~~~~~~~~~~~~~~~--~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~---~~~v~~~v~~~~~~  249 (570)
                      +..++++++++....  ...||++++.+++||||||+||+||+|.. .++++|||+.......   ..+++.+|++|++.
T Consensus       154 ~~~~~Lt~av~~~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~w~~-~~g~~apl~~~~~~~~~~~~~~v~~~v~~~~~~  232 (395)
T 3fy1_A          154 KPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEG-YTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDN  232 (395)
T ss_dssp             SCCCEEEEEECCSHHHHHHHCCHHHHHHHCSEEEECCCCCSCGGGS-BCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHT
T ss_pred             CCceEEEEEecCChhHhhcchhHHHHHhhcceeeeecccccCCCCC-CCCCCCcCcCCCCCccccccccHHHHHHHHHHc
Confidence            233556666555432  24689999999999999999999999875 6999999997665432   25899999999999


Q ss_pred             CCCCCceeeeccccccceeccCCCCCCCCCCCC-----CCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecC
Q 008332          250 GLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA-----GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTG  324 (570)
Q Consensus       250 gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~-----g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~  324 (570)
                      |+|++||+||||+|||.|++.++.+++.|++..     |+++.+.|.++|.|||..+++ +  ++..||+.+..||+..+
T Consensus       233 gvp~~KlvlGip~YGr~~~~~~~~~~~~g~p~~g~~~~G~~t~~~G~~~y~ei~~~~~~-g--~~~~~D~~~~~~y~~~~  309 (395)
T 3fy1_A          233 GAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN-G--ATQGWDAPQEVPYAYQG  309 (395)
T ss_dssp             TCCGGGEEEEEESEEEEEEESSTTCCSTTCBEEEECCCCTTTCCTTEEEHHHHHHHHHT-T--CEEEEETTTTEEEEEET
T ss_pred             CCCHHHEEEEeccccceeEecCCCCCCCCCcccCCCCCCcccCCCceeeHHHHHHHhcc-C--CeEEEecccceEEEEEC
Confidence            999999999999999999999988888887754     556778999999999987763 3  68899999999999999


Q ss_pred             CEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhh--------HHHHhhhc
Q 008332          325 TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDW--------LLSQAAAQ  371 (570)
Q Consensus       325 ~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~--------~~~~~~~~  371 (570)
                      ++||+|||++|+++|++|++++||||+|+|+|++||+..        .|++++.+
T Consensus       310 ~~~v~ydd~~Si~~K~~~~~~~gLgG~~~W~ld~DD~~g~~C~~~~~pLl~~i~~  364 (395)
T 3fy1_A          310 NVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKK  364 (395)
T ss_dssp             TEEEECCCHHHHHHHHHHHHHTTCSEEEEECGGGSCSSSTTTSSCSSHHHHHHHH
T ss_pred             CEEEEeCCHHHHHHHHHHHHhCCCCEEEEEccccCccCCCcCCCCCchHHHHHHH
Confidence            999999999999999999999999999999999999754        36666664

>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A

Probab=100.00  E-value=2.1e-66  Score=528.64  Aligned_cols=337  Identities=26%  Similarity=0.442  Sum_probs=283.6

Q ss_pred             eEEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcC
Q 008332           26 WIRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ   98 (570)
Q Consensus        26 ~~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg   98 (570)
                      .++||||++|+       .+.+++||+++||||+|+|+.++++  .+...+..+...+.++ ..||+++|++|+++||||
T Consensus         1 ~~vv~Y~~~w~~~~~~~~~~~~~~i~~~~~Thi~~aF~~i~~~--~~~~~d~~d~~~~~~~-~~lk~~~~~lkvllsiGG   77 (377)
T 1vf8_A            1 YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNN--EITYTHEQDLRDYEAL-NGLKDKNTELKTLLAIGG   77 (377)
T ss_dssp             CEEEEEEEGGGGGSCGGGCCCGGGSCTTTCSEEEEEEEEEETT--EEECSSTTHHHHHHHH-HHGGGTCTTCEEEEEEEC
T ss_pred             CeEEEEECcchhcCCcCCCCChHHCCcccCCEEEEEeEeeccC--ceeecchhHHHHHHHH-HHHHhhCCCCeEEEEECC
Confidence            37999999996       4679999999999999999999987  5555543344456666 459999999999999999


Q ss_pred             CCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC----CCCccchhhhHHHHHHHHhhhhhcccccc
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDEWRIAATKLDAKNSTRQ  174 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~----~~~~~~~~~l~~~lr~~l~~~~~~~~~~~  174 (570)
                      |.. ++..|+.+++++++|++||+++++++++|+|||||||||||+.    ++|+.+|+.|+++||++|++.....+   
T Consensus        78 ~~~-~s~~fs~~~~~~~~R~~fi~si~~~~~~~~fDGiDiDwEyp~~~g~~~~d~~n~~~ll~eLr~~l~~~~~~~~---  153 (377)
T 1vf8_A           78 WKF-GPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMRKAFEEESVEKD---  153 (377)
T ss_dssp             TTT-CSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCC-CCchHhHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEeeeCCCcCCCCHHHHHHHHHHHHHHHHHHHhhhhccC---
Confidence            864 4567999999999999999999999999999999999999954    35788999999999999985433221   


Q ss_pred             cceEEEEeecccCCC--CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC---CccCHHHHHHHHHHc
Q 008332          175 QSLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR---FARSTDQVLKAWIER  249 (570)
Q Consensus       175 ~~~~~~~~~~~~~~~--~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~---~~~~v~~~v~~~~~~  249 (570)
                      +..+.++++++....  ...||++++.+++||||||+||+||+|. ..+||+|||+......   ...+++.+|++|++.
T Consensus       154 ~~~~~Ls~a~~~~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~w~-~~~g~~apl~~~~~~~~~~~~~~v~~~v~~~~~~  232 (377)
T 1vf8_A          154 IPRLLLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDPKD-GYTGENSPLYKSPYDIGKSADLNVDSIISYWKDH  232 (377)
T ss_dssp             SCCCEEEEEECSSHHHHHHHCCHHHHHHHCSEEEECCCCCSCGGG-SBCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHT
T ss_pred             CCceEEEEEccCCHHHHhccCCHHHHHhhCcEEEEEeecccCCCC-CCCCCCCCCCCCCCCccccccccHHHHHHHHHHc
Confidence            234555555555432  2468999999999999999999999986 4699999999765432   235899999999999


Q ss_pred             CCCCCceeeeccccccceeccCCCCCCCCCCCC-----CCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecC
Q 008332          250 GLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA-----GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTG  324 (570)
Q Consensus       250 gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~-----g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~  324 (570)
                      |+|++||+||||||||.|++.++.+++.|++..     |+++.++|.++|.|||..++ .+  ++..||+.+..||...+
T Consensus       233 gvp~~KlvlGip~YGr~~~~~~~~~~~~g~p~~g~~~~g~~t~~~G~~~y~ei~~~~~-~g--~~~~~D~~~~~~y~y~~  309 (377)
T 1vf8_A          233 GAASEKLIVGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLN-EG--ATEVWDAPQEVPYAYQG  309 (377)
T ss_dssp             TCCGGGEEEEEESEEEEEEESCTTCCSTTCBEEEECCCCTTTCCTTEEEHHHHHHHHH-TT--CEEEEETTTTEEEEEET
T ss_pred             CCCHHHEEEEecccceeeEcccCCCCCCCCcCCCCCCCCCccCcCceecHHHHHHHHh-cC--CeEEeccccceeEEEeC
Confidence            999999999999999999999887777777654     55677899999999998764 33  78999999999999889


Q ss_pred             CEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhh--------HHHHhhhccc
Q 008332          325 TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDW--------LLSQAAAQKD  373 (570)
Q Consensus       325 ~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~--------~~~~~~~~~~  373 (570)
                      ++||+|||++|+++|++|++++||||+|+|+|++||++.        .|++++.+.-
T Consensus       310 ~~~v~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~g~~c~~~~~~Ll~ai~~~l  366 (377)
T 1vf8_A          310 NEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTSTLKGDL  366 (377)
T ss_dssp             TEEEECCCHHHHHHHHHHHHHTTCCEEEEETGGGSCTTSTTTSSCSSHHHHHHHHHT
T ss_pred             CEEEEecCHHHHHHHHHHHHhCCCceEEEEeeecccCCCCcCCCCCchHHHHHHHHh
Confidence            999999999999999999999999999999999999754        6777777643

>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*

Probab=100.00  E-value=7.7e-66  Score=534.34  Aligned_cols=333  Identities=27%  Similarity=0.459  Sum_probs=281.2

Q ss_pred             EEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCC
Q 008332           27 IRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQG   99 (570)
Q Consensus        27 ~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~   99 (570)
                      ++||||++|+       .+.+++|++++||||+|+|+.++++  .+...+..+...+.++ ..||+++|++|+++|||||
T Consensus         2 kvv~Y~~~w~~~r~~~~~~~~~~i~~~~~THi~yaF~~i~~~--~~~~~d~~d~~~~~~~-~~lk~~~p~lKvllsiGGw   78 (445)
T 1wb0_A            2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNH--QLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIGGW   78 (445)
T ss_dssp             EEEEEEETTGGGSCGGGCCCGGGCCTTTCSEEEEEEEEEETT--EEECSSTTHHHHHHHH-HHGGGTCTTCEEEEEEECT
T ss_pred             eEEEEECcccccCCCCCCCCHHHCCcccCCEEEEEEEeeccC--ceeecChhHHHHHHHH-HHHHHhCCCCeEEEEECCC
Confidence            6899999996       4679999999999999999999987  5555544344456666 4599999999999999998


Q ss_pred             CCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC----CCCccchhhhHHHHHHHHhhhhhccccccc
Q 008332          100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDEWRIAATKLDAKNSTRQQ  175 (570)
Q Consensus       100 ~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~----~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~  175 (570)
                      +. ++..|+.+++++++|++||++++++|++|+|||||||||||+.    ++|+.+|+.|+++||++|++.....+   +
T Consensus        79 ~~-~s~~fs~~~~~~~~R~~fi~siv~~l~~~gfDGiDiDwEyP~~~g~~~~d~~nf~~ll~eLr~~l~~~~~~~~---~  154 (445)
T 1wb0_A           79 NF-GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSG---K  154 (445)
T ss_dssp             TT-CSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHHHHHC---S
T ss_pred             CC-CCchHHHHHcCHHHHHHHHHHHHHHHHHcCCCeEEEeCccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhccC---C
Confidence            75 4568999999999999999999999999999999999999954    45889999999999999985433221   2


Q ss_pred             ceEEEEeecccCCC--CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC---CccCHHHHHHHHHHcC
Q 008332          176 SLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR---FARSTDQVLKAWIERG  250 (570)
Q Consensus       176 ~~~~~~~~~~~~~~--~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~---~~~~v~~~v~~~~~~g  250 (570)
                      ..++|+++++....  ...||+++|.+++||||||+||+||+|. ..+||+|||+......   ...+++.+|++|+++|
T Consensus       155 ~~~~Ls~av~~~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~w~-~~~g~~apL~~~~~~~~~~~~~~v~~av~~~~~~g  233 (445)
T 1wb0_A          155 ERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWE-KVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKG  233 (445)
T ss_dssp             CCCEEEEEECCCHHHHHHHCCHHHHHHHCSEEEECCCCSSCTTS-SBCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHTT
T ss_pred             CceEEEEEecCCHHHHHccCCHHHHHHhcceeeeeeeeccCCCc-CCCCCCCCCCCCCCCccccccccHHHHHHHHHHcC
Confidence            34555555554432  2468999999999999999999999986 5699999999765432   2358999999999999


Q ss_pred             CCCCceeeeccccccceeccCCCCCCCCCCCC-----CCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCC
Q 008332          251 LSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA-----GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGT  325 (570)
Q Consensus       251 vp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~-----g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~  325 (570)
                      +|++||+||||||||.|++.++.++++|++..     |+.+.+.|.++|.|||..   .  .++..||+.+..||...++
T Consensus       234 vp~~KlvlGip~YGr~~~~~~~~~~~~g~p~~g~~~~g~~t~~~G~~~y~ei~~~---~--g~~~~~D~~~~~~y~y~~~  308 (445)
T 1wb0_A          234 TPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSW---K--GATKQRIQDQKVPYIFRDN  308 (445)
T ss_dssp             CCGGGEEEEEESEEEEEEESCTTCCSTTCBEEEECCCCTTTCCTTEEEHHHHTTC---T--TCEEEEETTTTEEEEEETT
T ss_pred             CChhHEEEEecccceeeEccCCCCCCCCCcccCCCCCCCccCcCCcccHHHHhhc---C--CcEEEeccccceeEEEeCC
Confidence            99999999999999999999887777777654     456778999999999974   2  3889999999999998899


Q ss_pred             EEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhh--------HHHHhhhcc
Q 008332          326 VWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDW--------LLSQAAAQK  372 (570)
Q Consensus       326 ~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~--------~~~~~~~~~  372 (570)
                      +||+|||++|++.|++||+++||||+|+|+|++||+..        .|++++.+.
T Consensus       309 ~~v~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~g~~c~~~~~~Ll~ai~~~  363 (445)
T 1wb0_A          309 QWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQE  363 (445)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCCEEEEECGGGSCTTCSSSSSCSSHHHHHHHHH
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCceEEEecccccccCCCcCCCCCchHHHHHHHH
Confidence            99999999999999999999999999999999999743        677777653

>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ...

Probab=100.00  E-value=1.3e-65  Score=520.22  Aligned_cols=323  Identities=24%  Similarity=0.398  Sum_probs=275.3

Q ss_pred             eEEEEEecCCCC-------CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcC
Q 008332           26 WIRVGYLNLSEV-------STISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ   98 (570)
Q Consensus        26 ~~vvgY~~~~~~-------~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg   98 (570)
                      +++||||++|+.       +.+++|++++||||+|+|+.++ ++ ++.+.+..+...+.++. .+|+++|++|+++||||
T Consensus         1 ~~vvgY~~~w~~~~~~~~~~~~~~i~~~~~Thi~~af~~i~-~g-~~~~~~~~d~~~~~~~~-~lk~~~p~lkvllsiGG   77 (361)
T 2pi6_A            1 YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANIS-NN-EIDTWEWNDVTLYDTLN-TLKNRNPKLKTLLSVGG   77 (361)
T ss_dssp             CEEEEEEEGGGGGSSGGGCCCGGGSCTTTCSEEEEEEEEEE-TT-EEECCSTTHHHHHHHHH-HHHHHCTTCEEEEEEET
T ss_pred             CeEEEEECcccccCCCCCCCChHHCCcccCCEEEEEEEecc-CC-eEEeccHHHHHHHHHHH-HHHhcCCCCeEEEEECC
Confidence            479999999963       7899999999999999999999 76 77766533444566765 59999999999999999


Q ss_pred             CCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceE
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLL  178 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~  178 (570)
                      |.. ++..|+.+++++++|++||+++++++++|+|||||||||||. ..|+.+|+.|+++||++|+......+    ..+
T Consensus        78 ~~~-~s~~f~~~~~~~~~r~~fi~si~~~~~~~~fDGiDiDwE~p~-~~d~~~~~~ll~eLr~~l~~~~~~~~----~~~  151 (361)
T 2pi6_A           78 WNF-GPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG-RRDKRHLTTLVKEMKAEFIREAQAGT----EQL  151 (361)
T ss_dssp             TTS-CHHHHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCC-GGGHHHHHHHHHHHHHHHHHHHTTSS----CCC
T ss_pred             CCC-CchhHHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEeeecCC-chHHHHHHHHHHHHHHHHhhhhcccC----Cce
Confidence            865 467799999999999999999999999999999999999995 46899999999999999986433221    334


Q ss_pred             EEEeecccCCCC--CccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCC--CCccCHHHHHHHHHHcCCCCC
Q 008332          179 ILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISG--RFARSTDQVLKAWIERGLSAD  254 (570)
Q Consensus       179 ~~~~~~~~~~~~--~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~--~~~~~v~~~v~~~~~~gvp~~  254 (570)
                      .+++++++....  ..||++++.+++||||||+||+||+|+. .+||+|||+.....  ....+++.+|++|++.|+|++
T Consensus       152 ~Ls~a~~~~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~w~~-~~g~~apl~~~~~~~~~~~~~v~~~v~~~~~~g~p~~  230 (361)
T 2pi6_A          152 LLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQ-TVGHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPAN  230 (361)
T ss_dssp             EEEEEEECCHHHHHHHCCHHHHHHHCSEEEEETTCCSCTTCC-BCCCSSCSSCCSSSCSCTTSSHHHHHHHHHHTTCCGG
T ss_pred             EEEEEecCCHHHHhccCCHHHHHhhccEEEEEeeeccCCCCC-CCCCCCCCCCCCCCccccCccHHHHHHHHHHcCCCHH
Confidence            555555544322  4689999999999999999999999864 69999999975543  234589999999999999999


Q ss_pred             ceeeeccccccceeccCCCCCCCCCCCC-----CCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEe
Q 008332          255 KLVMCLPFYGYAWTLVKPEDNGIGAAAA-----GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFG  329 (570)
Q Consensus       255 KlvlGip~yG~~~~~~~~~~~~~g~~~~-----g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~  329 (570)
                      ||+||||||||.|++.++ +++.|++..     |+++.++|.++|.|||+.+.  +  ++..||+.+..||...+++||+
T Consensus       231 KlvlGip~YGr~~~~~~~-~~~~~~~~~g~~~~g~~t~~~g~~~y~ei~~~~~--g--~~~~~D~~~~~~y~~~~~~~v~  305 (361)
T 2pi6_A          231 KLVMGIPTFGRSFTLASS-KTDVGAPVSGPGIPGRFTKEKGILAYYEICDFLH--G--ATTHRFRDQQVPYATKGNQWVA  305 (361)
T ss_dssp             GEEEEEESEEEEEEESSS-CCSTTCBEEEECCCCTTTCCTTEEEHHHHHHHTT--T--CEEEEETTTTEEEEEETTEEEE
T ss_pred             HEEEEecccceeeecCCC-CCCCCCcCCCCCCCCCcCCCCceeeHHHHHHHhc--C--CEEEecccccceEEEECCEEEE
Confidence            999999999999999887 677776654     55677889999999999763  3  7899999999999988899999


Q ss_pred             ccCHHHHHHHHHhhhccCCceEEEEEccccChhh
Q 008332          330 FDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDW  363 (570)
Q Consensus       330 ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~  363 (570)
                      |||++|+++|++|++++||||+|+|+|++||++.
T Consensus       306 ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~g  339 (361)
T 2pi6_A          306 YDDQESVKNKARYLKNRQLAGAMVWALDLDDFRG  339 (361)
T ss_dssp             CCCHHHHHHHHHHHHHTTCSEEEEECGGGSCSSS
T ss_pred             eCCHHHHHHHHHHHHhCCCcEEEEEcccccccCC
Confidence            9999999999999999999999999999999653

>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1

Probab=100.00  E-value=3.1e-65  Score=526.25  Aligned_cols=340  Identities=24%  Similarity=0.366  Sum_probs=273.9

Q ss_pred             CCCCCCeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCCce-----------------------------EEe
Q 008332           20 PAKAKPWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINSTTY-----------------------------QLS   66 (570)
Q Consensus        20 ~~~~~~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~~~-----------------------------~~~   66 (570)
                      ++.++++++||||++|+    .+.+++||+++||||+|+|+.++.+|.                             ++.
T Consensus         6 ~~~~~~~~vvgY~~~W~~y~~~~~~~~i~~~~~THi~yaFa~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   85 (419)
T 1itx_A            6 AEAADSYKIVGYYPSWAAYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPVTWTCQNEKSQTINVPNGTIV   85 (419)
T ss_dssp             CCGGGGCEEEEEEEGGGGTTTCCCGGGCCGGGCSEEEEEEEEECBTTEEEECCTTSSCCEEEECBCTTSCBCCCCTTCEE
T ss_pred             cccCCCCEEEEEECchhhcCCCCChhhCCHhhCcEEEEEeecccccccccccccccccccccccccccccccccCCCcee
Confidence            34566789999999996    468999999999999999999964331                             222


Q ss_pred             eCCCcc---------------HHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHc
Q 008332           67 LSLPSD---------------ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLY  131 (570)
Q Consensus        67 ~~~~~~---------------~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~  131 (570)
                      +.+++.               ...+.++. .||+++|++|+++|||||..  +..|+.+++++++|++||+++++||++|
T Consensus        86 ~~D~~~d~~~~~~~~~w~~~~~g~~~~l~-~lk~~~p~lKvllsiGGw~~--s~~fs~~~~~~~~R~~Fi~s~v~~l~~~  162 (419)
T 1itx_A           86 LGDPWIDTGKTFAGDTWDQPIAGNINQLN-KLKQTNPNLKTIISVGGWTW--SNRFSDVAATAATREVFANSAVDFLRKY  162 (419)
T ss_dssp             ESSHHHHHTSCCTTCCSSSSCCHHHHHHH-HHHHHSTTCEEEEEEECSSS--CTTHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred             ecchhhhhhcccCccccchhhhHHHHHHH-HHHHhCCCCEEEEEEcCCCC--cchhhHHhcCHHHHHHHHHHHHHHHHHc
Confidence            222111               13466664 59999999999999999875  4579999999999999999999999999


Q ss_pred             CCCceeeeccCCCC---------CCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhh
Q 008332          132 GFRGLDFAWTAPNT---------STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRN  201 (570)
Q Consensus       132 ~~DGidiDwE~p~~---------~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~  201 (570)
                      +|||||||||||+.         ++|+.+|+.|+++||++|++.....    +..+.++++++.... ...||++++.++
T Consensus       163 ~fDGiDiDwEyP~~~~~~g~~~~~~d~~nf~~ll~eLr~~l~~~~~~~----g~~~~Lt~a~~~~~~~~~~~d~~~l~~~  238 (419)
T 1itx_A          163 NFDGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVD----GKKYLLTIASGASATYAANTELAKIAAI  238 (419)
T ss_dssp             TCSEEEEECSCSSSCSCTTSCCCTTHHHHHHHHHHHHHHHHHHHHHHH----TSCCEEEEEECCSHHHHHTSCHHHHHHH
T ss_pred             CCCceEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhhccc----CCceEEEEeccCCHHHhhcCCHHHHHHh
Confidence            99999999999953         4678899999999999998643321    223455555544322 246899999999


Q ss_pred             hceeeeecccCCCCCCCCCCCCCCCCCCCCC-------CCCccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCC
Q 008332          202 LNWIHAVTASYYEPVSTNFTAPPAALYGSIS-------GRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPED  274 (570)
Q Consensus       202 vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~-------~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~  274 (570)
                      +||||||+||+||+|.. .++|+|||+..+.       .....+++.+|++|++.|+|++||+||||||||.|++.++..
T Consensus       239 vD~inlMtYD~~g~w~~-~~g~~apL~~~~~~~~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~w~~~~~~~  317 (419)
T 1itx_A          239 VDWINIMTYDFNGAWQK-ISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVPFYGRGWDGCAQAG  317 (419)
T ss_dssp             SSEEEECCCCSSCTTSS-BCCCSSCSSCCHHHHHTTCTTTTTCSHHHHHHHHHHHTCCGGGEEEEEESEEEEEESCCSGG
T ss_pred             hheeeeecccccCCCCC-CCCCCCcCcCCCCccccCCcccccccHHHHHHHHHHcCCCchhEEEEecccccceeecCCCC
Confidence            99999999999999864 6999999996432       123458999999999999999999999999999999887655


Q ss_pred             CCCCCCCCCC---CCCCCCcccHHHHHHHH-hhCCCCeEEeecCceEEEEeec--CCEEEeccCHHHHHHHHHhhhccCC
Q 008332          275 NGIGAAAAGP---ALYDSGLVTYKKIKNHI-KTYGPDVQVMYNSTYEVNYFST--GTVWFGFDDVEAVRAKIAYAKEKRL  348 (570)
Q Consensus       275 ~~~g~~~~g~---~~~~~g~~~y~~i~~~~-~~~~~~~~~~~d~~~~~~y~~~--~~~~i~ydd~~Si~~K~~~~~~~gL  348 (570)
                      ++.+.+..|+   ++.+.|.++|.|||..+ ...+  ++..||+.+..||...  +++||+|||++|++.|++||+++||
T Consensus       318 ~g~~~~~~g~~~~G~~~~G~~~y~ei~~~~~~~~g--~~~~~D~~~~~~y~y~~~~~~~v~ydd~~Si~~K~~y~~~~gL  395 (419)
T 1itx_A          318 NGQYQTCTGGSSVGTWEAGSFDFYDLEANYINKNG--YTRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGL  395 (419)
T ss_dssp             GGTTCBCSEECSCCSSSTTEEEHHHHHHHTTTCTT--EEEEEETTTTEEEEEETTTCCEEECCCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCeeeHHHHHHhhcccCC--cEEEeccccccceEEeCCCCEEEEeCCHHHHHHHHHHHHhCCC
Confidence            5555444432   45678999999999754 3344  8899999999999854  5799999999999999999999999


Q ss_pred             ceEEEEEccccChhhHHHHhhh
Q 008332          349 LGYYAWQVSFDDHDWLLSQAAA  370 (570)
Q Consensus       349 gGv~~W~l~~Dd~~~~~~~~~~  370 (570)
                      ||+|+|+|++|+.. .|++++.
T Consensus       396 gGv~~W~l~~D~~~-~Ll~ai~  416 (419)
T 1itx_A          396 GGAMFWELSGDRNK-TLQNKLK  416 (419)
T ss_dssp             CEEEEECGGGCTTC-HHHHHHH
T ss_pred             CeEEEEeecCCCCc-HHHHHHH
Confidence            99999999999865 5666654

>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp}

Probab=100.00  E-value=5.6e-65  Score=526.51  Aligned_cols=334  Identities=23%  Similarity=0.346  Sum_probs=269.1

Q ss_pred             CCCCCCCeEEEEEecCCCC------CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCc-cHHHHHH------------H
Q 008332           19 HPAKAKPWIRVGYLNLSEV------STISGINYDLFTHLICSSADINSTTYQLSLSLPS-DENQIAK------------F   79 (570)
Q Consensus        19 ~~~~~~~~~vvgY~~~~~~------~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~-~~~~~~~------------~   79 (570)
                      .++.++.+++||||.+|+.      +.++++++++||||+|+|+.+++++ .+.+.+.. +...+.+            .
T Consensus        19 ~~~~~~~~~vvgYy~~~~~~r~~~~~~~~~i~~~~~THi~~af~~i~~~g-~~~~~~~~~d~~~~~~~w~~~~~~~~~~~   97 (420)
T 3qok_A           19 SALSAQPLMSVGYFNGGGDVTAGPGGDIDKLDVRQITHLNYSFGLIYNDE-KDETNAALKDPAHLHEIWLSPKVQADLQK   97 (420)
T ss_dssp             ------CCEEEEEEECSCCSSSCSCCCGGGCCCTTCSEEEEEEEEECCCC-TTCCCGGGGCGGGTTSEECCHHHHHHHTT
T ss_pred             CCccCCCCEEEEEEcCccccCCCCCCCcccCCcccceEEEEEeEEECCCC-cEEecCcccchhhhhhcccccchhhhHHH
Confidence            4456778999999999975      6899999999999999999999876 44442221 2222221            1


Q ss_pred             HHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCC---------CCCCcc
Q 008332           80 ADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPN---------TSTDMF  150 (570)
Q Consensus        80 ~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~---------~~~~~~  150 (570)
                      +..+|+++|++||++|||||.   +..|+.+++++++|++||+++++++++|+|||||||||||+         .++|+.
T Consensus        98 ~~~lk~~~p~lkvllsiGG~~---s~~f~~~~~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p~~~~~~~~~~~~~d~~  174 (420)
T 3qok_A           98 LPALRKQNPDLKVLLSVGGWG---ARGFSGAAATAESRAVFIRSAQKIIQQYGLDGIDLDWEFPVNGAWGLVASQPADRD  174 (420)
T ss_dssp             HHHHHHHCTTCEEEEEEECTT---CCCHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCTTTHHHHTSCCCTTHHH
T ss_pred             HHHHHHhCCCCEEEEEECCCC---CcchhhhhCCHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCCCChhHHH
Confidence            345899999999999999986   56799999999999999999999999999999999999995         367889


Q ss_pred             chhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCC--CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCC
Q 008332          151 NIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALY  228 (570)
Q Consensus       151 ~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~  228 (570)
                      +|+.|+++||++|++         +  +.++++++....  ...||++++.+++||||||+||+||+|..    |+|||+
T Consensus       175 ~~~~ll~eLr~~l~~---------~--~~Ls~a~~~~~~~~~~~~d~~~l~~~~D~inlMtYD~~g~w~~----~~apL~  239 (420)
T 3qok_A          175 NFTALLKSLREAVGE---------Q--KLVTIAVGANAESPKSWVDVKAVAPVLNYINLMTYDMAYGTQY----FNSNLY  239 (420)
T ss_dssp             HHHHHHHHHHHHHCS---------S--SEEEEEECSCTHHHHHTSCHHHHGGGCSEEEECCCCCCCTTCC----CSSCSS
T ss_pred             HHHHHHHHHHHHhCC---------C--cEEEEEecCccccccccccHHHHHhhCCEEEEecccCCCCCCC----CCCccc
Confidence            999999999999961         3  344444444332  35789999999999999999999999874    999999


Q ss_pred             CCC-----CCCCccCHHHHHHHHHHcCCCCCceeeeccccccc----------eeccCCCCCCCCCCCCCC---------
Q 008332          229 GSI-----SGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYA----------WTLVKPEDNGIGAAAAGP---------  284 (570)
Q Consensus       229 ~~~-----~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~----------~~~~~~~~~~~g~~~~g~---------  284 (570)
                      ..+     ......+++.+|++|++.|+|++||+||||||||.          |+++++..++.+++..|+         
T Consensus       240 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~p~~KlvlGip~YGr~~~~~~~~~~~w~~~~~~~~g~~~~~~g~~~~~~~~~~  319 (420)
T 3qok_A          240 DSSHWPTVAAADKYSADFVVNNYLAAGLKPSQMNLGIGFYGRVPKRAVEPGIDWTKADAQNNPVTQPYFGPQQIALFASL  319 (420)
T ss_dssp             CCSSSCCCSGGGCCCHHHHHHHHHHHTCCGGGEEEEEESEEECCGGGTSCBCCTTSTTGGGSCSBCCCCCHHHHHHHHHT
T ss_pred             CCCcccccCCcccccHHHHHHHHHHcCCCHHHeEEEecccccccccccccccceecCCcccCCCCCCccCCCCCCCCCCC
Confidence            766     22234589999999999999999999999999999          998877667777665433         


Q ss_pred             --CCCCCCcccHHHHHHHH-hhCCCCeEEeecCceEEEEeecCC----E--EEeccCHHHHHHHHHhhhccCCceEEEEE
Q 008332          285 --ALYDSGLVTYKKIKNHI-KTYGPDVQVMYNSTYEVNYFSTGT----V--WFGFDDVEAVRAKIAYAKEKRLLGYYAWQ  355 (570)
Q Consensus       285 --~~~~~g~~~y~~i~~~~-~~~~~~~~~~~d~~~~~~y~~~~~----~--~i~ydd~~Si~~K~~~~~~~gLgGv~~W~  355 (570)
                        .....|.++|.+||+.+ ...+..++..||++++.||+.+.+    +  ||+|||++|+++|++|++++||||+|+|+
T Consensus       320 G~~~~~~g~~~y~ei~~~~~~~~g~~~~~~~D~~~~~~y~~~~~~~g~~~~~v~ydd~~Si~~K~~~~~~~gLgGv~~W~  399 (420)
T 3qok_A          320 GYDLSKDTYVKYNDIVGKLLNDPQKRFTEHWDDEAKVPWLSVQSAEGKPLFALSYENPRSVAIKADYIKAKGLAGAMFWE  399 (420)
T ss_dssp             TCCTTTCCEEEHHHHHHHTTTCTTCCEEEEEETTTTEEEEEEECTTSCEEEEEECCCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             CccccCCCccCHHHHHHHhhccCCCceEEEECccccccEEEeCCCCCccceEEEcCCHHHHHHHHHHHHhCCCcEEEEEc
Confidence              23455679999999874 333334889999999999997544    5  99999999999999999999999999999


Q ss_pred             ccccChhhHHHHhhhcc
Q 008332          356 VSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       356 l~~Dd~~~~~~~~~~~~  372 (570)
                      +++|| +.+|++++.+.
T Consensus       400 l~~Dd-~~~Ll~a~~~~  415 (420)
T 3qok_A          400 YGADD-QNQLARQLAES  415 (420)
T ss_dssp             GGGSS-TTHHHHHHHHH
T ss_pred             cccCC-ccHHHHHHHHH
Confidence            99999 56677777653

>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A*

Probab=100.00  E-value=7.3e-64  Score=517.69  Aligned_cols=327  Identities=20%  Similarity=0.330  Sum_probs=264.1

Q ss_pred             eEEEEEecCCC-------CCcCCCCC--CCCcceEEEEeEEEeCCceEEeeCCCc---cHHHHHHHHHHHHhhCCCceEE
Q 008332           26 WIRVGYLNLSE-------VSTISGIN--YDLFTHLICSSADINSTTYQLSLSLPS---DENQIAKFADTVKKKNPSITTI   93 (570)
Q Consensus        26 ~~vvgY~~~~~-------~~~~~~i~--~~~~Thii~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~lk~~~~~~kvl   93 (570)
                      +++||||++|+       .+.+++|+  +++||||+|+|+.++++++.+...++.   ....+.++. .+|+++|++||+
T Consensus         2 ~~vvgYy~~w~~~r~~~~~~~~~~i~~~~~~~THi~yaFa~i~~~~~~~~~~d~~~d~~~~~~~~~~-~lk~~~p~lKvl   80 (420)
T 1jnd_A            2 SNLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVT-SLKRKYPHLKVL   80 (420)
T ss_dssp             CEEEEEEEGGGGGCSSTTCCCHHHHHHHGGGCSEEEEEEEEECTTTCCEEETTHHHHTTTCHHHHHH-GGGGTSTTCEEE
T ss_pred             CeEEEEEccchhcCCCCCCcCHhHcCCccccCCEEEEEEEEecCCCCEEEecCccchhhhHHHHHHH-HHHhhCCCceEE
Confidence            58999999996       35677777  478999999999999986677765431   124566765 499999999999


Q ss_pred             EEEcCCCCC---CcccccccccChHHH-HHHHHHHHHHHHHcCCCceeeeccCCCCC-----------------------
Q 008332           94 LSIGQGKDT---NYSIYSSMVRNSSHR-KSFIDSSIRIARLYGFRGLDFAWTAPNTS-----------------------  146 (570)
Q Consensus        94 lsigg~~~~---~~~~f~~~~~~~~~r-~~fi~siv~~~~~~~~DGidiDwE~p~~~-----------------------  146 (570)
                      +|||||..+   ++..|+.+++++++| ++||++++++|++|+|||||||||||+..                       
T Consensus        81 lsiGGw~~~~~~~s~~f~~~~~~~~~R~~~Fi~s~v~~~~~~gfDGiDiDwEyP~~~~~~~~g~~g~~~~~~~~~~~g~~  160 (420)
T 1jnd_A           81 LSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDF  160 (420)
T ss_dssp             EEEETTCCCCTTSTTHHHHHHTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCCCCCCCC-------------------
T ss_pred             EEeCCCcCCCCccchhhhHhhcChHHHHHHHHHHHHHHHHHcCCCceEEeeecCCccccccccccccccccccccccCCc
Confidence            999999752   256799999999999 99999999999999999999999999642                       


Q ss_pred             -------CCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCC
Q 008332          147 -------TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVST  218 (570)
Q Consensus       147 -------~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~  218 (570)
                             +|+.+|+.|+++||++|+.          ..+.+++++++... ...||++++.+++||||||+||+||+|..
T Consensus       161 ~~~~~~~~d~~nf~~ll~eLr~~l~~----------~~~~Ls~av~~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~~~~  230 (420)
T 1jnd_A          161 IVDPHAALHKEQFTALVRDVKDSLRA----------DGFLLSLTVLPNVNSTWYFDIPALNGLVDFVNLATFDFLTPARN  230 (420)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHHHHHHT----------TTCEEEEEECTTCCHHHHCCHHHHHTTCSEEEECCCCSSCTTTC
T ss_pred             ccccCChhHHHHHHHHHHHHHHHHhh----------cCcEEEEEEeCCcchhhccCHHHHHhhCcEEEEeeeecCCCcCC
Confidence                   4678999999999999973          22344444443322 24689999999999999999999999864


Q ss_pred             -CCCCCCCCCCCCCC---CCCccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCC--------CCCCCCCCCCC
Q 008332          219 -NFTAPPAALYGSIS---GRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN--------GIGAAAAGPAL  286 (570)
Q Consensus       219 -~~~~~~a~l~~~~~---~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~--------~~g~~~~g~~~  286 (570)
                       ..++|+|||+....   .....+++.+|++|++.|+|++||+||||||||.|+++++.+.        ..|....|+++
T Consensus       231 ~~~~g~~apl~~~~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~w~~~~~~~~~g~~~~~~~~g~~~~g~~t  310 (420)
T 1jnd_A          231 PEEADYSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVPVVPETSGPAPEGFQS  310 (420)
T ss_dssp             TTCBCCSSCSSCCTTSTTCCTTCSHHHHHHHHHHTTCCGGGEEEEEESEEEEEECCGGGCSCCSSCBCSCCSBCCCCTTT
T ss_pred             CCccccCCcccCCccccCccccccHHHHHHHHHHcCCCHHHEEEEecccceeeEecCCCCCCCCCcccccCCCCCCCCCC
Confidence             47899999997653   2234689999999999999999999999999999998764322        12333456778


Q ss_pred             CCCCcccHHHHHHHHhhCCC--------CeEEeecCce-EEEEee-------cCCEEEeccCHHHHHHHHHhhhccCCce
Q 008332          287 YDSGLVTYKKIKNHIKTYGP--------DVQVMYNSTY-EVNYFS-------TGTVWFGFDDVEAVRAKIAYAKEKRLLG  350 (570)
Q Consensus       287 ~~~g~~~y~~i~~~~~~~~~--------~~~~~~d~~~-~~~y~~-------~~~~~i~ydd~~Si~~K~~~~~~~gLgG  350 (570)
                      .++|.++|.|||..+...+.        .+...||+.. ..+|..       .+++||+|||++|+++|++||+++||||
T Consensus       311 ~~~G~~~y~ei~~~~~~~~~~~~~g~~~~~~~~~D~~~~~~~y~y~~~d~~~~~~~wvsydd~~Si~~K~~y~~~~gLgG  390 (420)
T 1jnd_A          311 QKPGLLSYAEICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYARVKNLGG  390 (420)
T ss_dssp             CCTTEEEHHHHHHHBCCTTTTTCCGGGSCBEEECCTTCCSCEEEEECSBTTBCCCEEEEECCHHHHHHHHHHHHHTTCSE
T ss_pred             CCCceeeHHHHHHhhcccCcccccccccceeEEechhhccceeEEEecccCCCCCEEEEcCCHHHHHHHHHHHHhCCCce
Confidence            89999999999998765431        2567888753 345553       3589999999999999999999999999


Q ss_pred             EEEEEccccChhh
Q 008332          351 YYAWQVSFDDHDW  363 (570)
Q Consensus       351 v~~W~l~~Dd~~~  363 (570)
                      +|+|+|++||++.
T Consensus       391 v~~W~l~~Dd~~g  403 (420)
T 1jnd_A          391 VALFDLSYDDFRG  403 (420)
T ss_dssp             EEEECGGGSCTTC
T ss_pred             EEEEeeccCCCCC
Confidence            9999999999764

>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1

Probab=100.00  E-value=4.6e-64  Score=517.12  Aligned_cols=336  Identities=22%  Similarity=0.311  Sum_probs=273.1

Q ss_pred             CCCCCeEEEEEecCCC----CCcCCCCC----CCCcceEEEEeEEEeC-CceEEeeC---------------CC------
Q 008332           21 AKAKPWIRVGYLNLSE----VSTISGIN----YDLFTHLICSSADINS-TTYQLSLS---------------LP------   70 (570)
Q Consensus        21 ~~~~~~~vvgY~~~~~----~~~~~~i~----~~~~Thii~~~~~~~~-~~~~~~~~---------------~~------   70 (570)
                      ...+++++||||++|+    .+.+++|+    +++||||+|+|+.+++ ++ .+...               ++      
T Consensus         4 ~~~~~~~vvgY~~~W~~y~~~~~~~~i~~~~~~~~~THi~yaFa~i~~~~g-~~~~~~~~~~~~~~~~~~~~D~~~d~~~   82 (435)
T 1kfw_A            4 STVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTL-TCFMANKAQGTGPNGSDGAGDAWADFGM   82 (435)
T ss_dssp             SSBTTBEEEEEEEGGGGSTTCCCHHHHHHTSCGGGCSEEEEEEECBCTTTC-SBCCCEECCCSSTTTTTTCEEHHHHHTC
T ss_pred             CCCCCcEEEEEECchhhcCCCCChhhCCcccccccCCEEEEEEEeecCCCC-eEEeeccccccccccccccccchhhhhc
Confidence            3456789999999996    45778887    4599999999999998 44 33211               00      


Q ss_pred             --------------cc---HHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHc--
Q 008332           71 --------------SD---ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLY--  131 (570)
Q Consensus        71 --------------~~---~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~--  131 (570)
                                    ++   ...+.++. .||+++|++||++|||||..  +..|+.+++++++|++||+++++|+++|  
T Consensus        83 ~~~~~~~~~g~~d~~~~~~~g~~~~l~-~lK~~~p~lKvllSiGGw~~--s~~fs~~~~~~~~R~~Fi~siv~~l~~~~l  159 (435)
T 1kfw_A           83 GYAADKSVSGKADTWDQPLAGSFNQLK-QLKAKNPKLKVMISLGGWTW--SKNFSKAAATEASRQKLVSSCIDLYIKGNL  159 (435)
T ss_dssp             CCCTTTSSSSSCCCTTCSCCHHHHHHH-HHHTTCTTCEEEEEEECSSS--CTTHHHHTSSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cccccccccccccccchhhHHHHHHHH-HHHHhCCCCEEEEEEcCCCC--cchhhHHhCCHHHHHHHHHHHHHHHHhhcc
Confidence                          00   23466665 59999999999999999874  5679999999999999999999999875  


Q ss_pred             --------------CCCceeeeccCCCCC-----------CCccchhhhHHHHHHHHhhhhhcccccccceEEEEeeccc
Q 008332          132 --------------GFRGLDFAWTAPNTS-----------TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRY  186 (570)
Q Consensus       132 --------------~~DGidiDwE~p~~~-----------~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~  186 (570)
                                    +|||||||||||+..           +|+.+|+.|+++||++|+......    +..+.|+++++.
T Consensus       160 ~~~~~~g~~g~~~~~fDGiDiDwEyP~~~~g~~g~~~~p~~d~~nf~~ll~eLr~~l~~~~~~~----g~~~~Ls~Avp~  235 (435)
T 1kfw_A          160 PNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTN----NKKYVLSAFLPA  235 (435)
T ss_dssp             EEETTEEETTTTTTTCCEEEEECSCTTSSCSSTTCCCCTTTHHHHHHHHHHHHHHHHHHHHHHT----TCCCEEEEEECS
T ss_pred             cccccccccccccCCCCceEEeeeCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhhccc----CCceEEEEEccC
Confidence                          699999999999753           688999999999999998654332    234555555555


Q ss_pred             CCCC-C-c-cChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC----CccCHHHHHHHHHHcCCCCCceeee
Q 008332          187 SPPA-N-S-YLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR----FARSTDQVLKAWIERGLSADKLVMC  259 (570)
Q Consensus       187 ~~~~-~-~-~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~----~~~~v~~~v~~~~~~gvp~~KlvlG  259 (570)
                      .... . + |++.+|.+++||||||+||+||+|....++|+|||+..+...    ...+++.+|++|++.|+|++||+||
T Consensus       236 ~~~~~~~g~~d~~~l~~~vD~invMtYD~~g~w~~~~tg~~apL~~~~~~~~~~~~~~~v~~av~~~~~~gvp~~KlvlG  315 (435)
T 1kfw_A          236 NPADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLG  315 (435)
T ss_dssp             SHHHHHHHTTTCGGGGGTCSEEEECCSCSSCTTSTTBCCCSSCSSCCTTCCSCGGGCCCHHHHHHHHHHTTCCGGGEEEE
T ss_pred             ChhhhccCcccHHHHHhhhheeeeeeecccCCCCCCCCCCCCcCCCCCCCcccccccccHHHHHHHHHHcCCCHHHEEEE
Confidence            4322 2 3 899999999999999999999998754499999999765432    2458999999999999999999999


Q ss_pred             ccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHHH
Q 008332          260 LPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAK  339 (570)
Q Consensus       260 ip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~K  339 (570)
                      ||||||.|+++++..++......++++.+.|.++|.||    . .+  ++..||+.+..||...+++||+|||++|++.|
T Consensus       316 ip~YGr~w~~~~~~~~g~~~~~~~~~t~~~G~~~y~ei----~-~~--~~~~~D~~~~~~y~y~~~~~vsydd~~Si~~K  388 (435)
T 1kfw_A          316 LAAYGRGWTGAKNVSPWGPATDGAPGTYETANEDYDKL----K-TL--GTDHYDAATGSAWRYDGTQWWSYDNIATTKQK  388 (435)
T ss_dssp             EESEEEEEESCCCSSSSCBCSEECCCSSBTTEEEHHHH----T-TS--SEEEEETTTTEEEEECSSCEEEECCHHHHHHH
T ss_pred             ecccceeeecCCCCCCCCCCCCCCCCCCcCCceeHHHh----c-CC--CeEEEccccceeEEEECCEEEEecCHHHHHHH
Confidence            99999999998766554212223567788999999999    1 22  67999999999999889999999999999999


Q ss_pred             HHhhhccCCceEEEEEccccChhhHHHHhhhcc
Q 008332          340 IAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       340 ~~~~~~~gLgGv~~W~l~~Dd~~~~~~~~~~~~  372 (570)
                      ++|++++||||+|+|+|++ |+++.|++++...
T Consensus       389 ~~y~~~~gLgGv~~W~l~~-D~~~~Ll~a~~~~  420 (435)
T 1kfw_A          389 TDYIVSKGLGGGMWWELSG-DRNGELVGAMSDK  420 (435)
T ss_dssp             HHHHHHTTCCEEEEECGGG-CTTCHHHHHHHHH
T ss_pred             HHHHHhCCCCEEEEEecCC-CCCchHHHHHHHH
Confidence            9999999999999999999 7777888888753

>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A*

Probab=100.00  E-value=2.9e-63  Score=510.03  Aligned_cols=337  Identities=22%  Similarity=0.323  Sum_probs=273.8

Q ss_pred             CCCCCCCeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccH------------------HHH
Q 008332           19 HPAKAKPWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDE------------------NQI   76 (570)
Q Consensus        19 ~~~~~~~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~------------------~~~   76 (570)
                      .++.++++++||||++|+    .+.+++|++++||||+|+|+.+++++ ++...+.+.+                  ..+
T Consensus        14 ~~~~~~~~~~v~Y~~~W~~y~~~~~~~~i~~~~~THi~yaF~~i~~~g-~v~~~d~~~d~~~~~~~~~~~~~~~~~~g~~   92 (406)
T 3g6m_A           14 LSTRATGSINAVYFTNWGIYGRNFQPADLQASKILHVLYSFMNLRVDG-TVYSGDTYADLEKHYSDDSWNDIGTNAYGCV   92 (406)
T ss_dssp             -----CCBEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEEEECTTS-CEEESCHHHHHTCCCTTCCSCCSSSCCCHHH
T ss_pred             CCcCCCCCEEEEEEChhhccCCCCChhhCChhhCCEEEEEEEEECCCC-cEEecChhhhhhhcccccccccccchhhHHH
Confidence            344567799999999996    57899999999999999999999987 6665543211                  235


Q ss_pred             HHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhH
Q 008332           77 AKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLF  156 (570)
Q Consensus        77 ~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~  156 (570)
                      .++. .+|+++|++||++|||||..  +..|+.+++++++|++||+++++++++|||||||||||||..++|+.+|+.|+
T Consensus        93 ~~~~-~lk~~~~~lKvllsiGGw~~--s~~fs~~~~~~~~R~~fi~siv~~l~~~gfDGiDiDwE~p~~~~d~~n~~~ll  169 (406)
T 3g6m_A           93 KQLY-KLKKANRSLKIMLSIGGWTW--STNFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYPASETDANNMVLLL  169 (406)
T ss_dssp             HHHH-HHHHHCTTCEEEEEEECSSS--CTTHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHH
T ss_pred             HHHH-HHHHHCCCCeEEEEEcCCCC--CchHHHHhCCHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCccchhhHHHHHH
Confidence            5554 59999999999999999874  56799999999999999999999999999999999999997767889999999


Q ss_pred             HHHHHHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC-
Q 008332          157 DEWRIAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR-  234 (570)
Q Consensus       157 ~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~-  234 (570)
                      ++||++|++.....+.  +..+.++++++.... ...||++++.+++||||||+||+||+|.. .+||+|||+...... 
T Consensus       170 ~eLr~~l~~~~~~~~~--~~~~~Lsia~p~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~w~~-~~g~~a~l~~~~~~~~  246 (406)
T 3g6m_A          170 QRVRQELDSYSATYAN--GYHFQLSIAAPAGPSHYNVLKLAQLGSVLDNINLMAYDYAGSWDS-VSGHQTNLYPSTSNPS  246 (406)
T ss_dssp             HHHHHHHHHHHHHHST--TCCCEEEEEEECSHHHHTTSCHHHHHHHCSEEEEECCCCSSTTSS-SCCCSSCSSCCSSCGG
T ss_pred             HHHHHHHHHhhhhccC--CCCeEEEEEecCCHHHhccCCHHHHHhhCCEEEEEcccCCCCCCC-CCCCCCcccCCCCCCc
Confidence            9999999864333222  233444554444322 25799999999999999999999999864 699999999765432 


Q ss_pred             -CccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCC--CCCCCCCCcccHHHHHHHHhhCCCCeEEe
Q 008332          235 -FARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA--GPALYDSGLVTYKKIKNHIKTYGPDVQVM  311 (570)
Q Consensus       235 -~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~--g~~~~~~g~~~y~~i~~~~~~~~~~~~~~  311 (570)
                       ...+++.+|++|++.|+|++||+||||||||.|++.+    +.|++..  |+++.++|.++|.+|++    .+  ++..
T Consensus       247 ~~~~~~~~~v~~~~~~g~p~~KlvlGip~YGr~~~~~~----~~g~~~~g~~~~t~~~g~~~y~~l~~----~g--~~~~  316 (406)
T 3g6m_A          247 STPFSTKAAVDAYIAAGVPASKIILGMPIYGRAFVGTD----GPGKPYSTIGEGSWESGIWDYKVLPK----AG--ATVI  316 (406)
T ss_dssp             GCSCCHHHHHHHHHHTTCCGGGEEEEEESEEEEEESCS----STTSCCSBCCCCSSBTTEEEGGGCSC----TT--CEEE
T ss_pred             CCchhHHHHHHHHHHcCCCHHHEEEEecccceeeecCC----CCCCCCcCCCCCcCcccceeHHHHHh----cC--CeEE
Confidence             2448999999999999999999999999999998753    4455444  34567889999988763    23  7899


Q ss_pred             ecCceEEEEeec--CCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChh-hHHHHhhhcc
Q 008332          312 YNSTYEVNYFST--GTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD-WLLSQAAAQK  372 (570)
Q Consensus       312 ~d~~~~~~y~~~--~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~-~~~~~~~~~~  372 (570)
                      ||+.+..||...  +++||+|||++|++.|++||+++||||+|+|++++||.. +.|++++.+.
T Consensus       317 ~D~~~~~~y~y~~~~~~~v~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~~Ll~a~~~~  380 (406)
T 3g6m_A          317 TDSAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKTGSDSLIGTALSS  380 (406)
T ss_dssp             EETTTTEEEEEETTTTEEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGCCSGGGCHHHHHHHH
T ss_pred             EecCcccceEEeCCCCEEEEeCCHHHHHHHHHHHHhCCCceEEEEecccCCCCchHHHHHHHHH
Confidence            999999998754  579999999999999999999999999999999999974 4677777754

>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A*

Probab=100.00  E-value=4.1e-63  Score=520.69  Aligned_cols=344  Identities=23%  Similarity=0.376  Sum_probs=282.0

Q ss_pred             CCCeEEEEEec--C--------CC----CCcCCCCC---CCCcceEEEEeEEEeCCceEEeeCCCcc----HHHHHHHHH
Q 008332           23 AKPWIRVGYLN--L--------SE----VSTISGIN---YDLFTHLICSSADINSTTYQLSLSLPSD----ENQIAKFAD   81 (570)
Q Consensus        23 ~~~~~vvgY~~--~--------~~----~~~~~~i~---~~~~Thii~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   81 (570)
                      .+.++|||||+  +        |.    .+.+++|+   .++||||+|+|+.+++++ .+.+.+.+.    ...+.++. 
T Consensus         2 ~~~~~vvgYy~~~~~~w~~~~~~~~~~~~~~~~~i~~~q~~~~THi~yaF~~i~~~g-~~~~~~~~~d~~~~~~~~~l~-   79 (499)
T 1goi_A            2 STRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNL-ECAWDPATNDAKARDVVNRLT-   79 (499)
T ss_dssp             -CCCEEEEEEECCHHHHHTCCSSCTTTCSSCGGGSCHHHHHHCSEEEEEEEEECTTS-SEECCTTCCHHHHHHHHHHHH-
T ss_pred             CCCCEEEEEEccCccccccccccCCccCcCCHhHCCCccccCCCEEEEEeEEECCCC-eEEecCcccchhhHHHHHHHH-
Confidence            46789999999  6        33    57899999   999999999999999876 666665322    24566664 


Q ss_pred             HHHhhCCCceEEEEEcCCCCCC-----cccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhH
Q 008332           82 TVKKKNPSITTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLF  156 (570)
Q Consensus        82 ~lk~~~~~~kvllsigg~~~~~-----~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~  156 (570)
                      .+|+++|++|+++|||||..++     ...|+.+++++++|++||++++++|++|+|||||||||||. ++|+.+|+.|+
T Consensus        80 ~lk~~~p~lKvllSiGGw~~s~~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~gfDGiDiDwE~p~-~~d~~~~~~ll  158 (499)
T 1goi_A           80 ALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQ-AAEVDGFIAAL  158 (499)
T ss_dssp             HGGGGCTTCEEEEEEECHHHHSTTSTTHHHHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCC-HHHHHHHHHHH
T ss_pred             HHHHhCCCCeEEEEECCCCCCCCcccccchhhHhhCCHHHHHHHHHHHHHHHHHcCCCeEEEecccCC-hhhHHHHHHHH
Confidence            5899999999999999985321     16799999999999999999999999999999999999995 68899999999


Q ss_pred             HHHHHHHhhhhhcccccccceEEEEeecccCCC--CCcc-ChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCC
Q 008332          157 DEWRIAATKLDAKNSTRQQSLLILTARFRYSPP--ANSY-LLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISG  233 (570)
Q Consensus       157 ~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~  233 (570)
                      ++||++|+......++. ...++|+++++....  ...| ++.+|.+++||||||+||+||+|+ ..+||+|||++....
T Consensus       159 ~eLr~~l~~~~~~~g~~-~~~~~Ls~a~~~~~~~~~~~y~d~~~l~~~vD~inlMtYD~~g~w~-~~tg~~apL~~~~~~  236 (499)
T 1goi_A          159 QEIRTLLNQQTITDGRQ-ALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWE-KVTNHQAALFGDAAG  236 (499)
T ss_dssp             HHHHHHHHHHHHHTTCT-TSCCEEEEEEESSHHHHTTTGGGHHHHHTTCSEEEEECCCSSCTTS-SSCCCTTCSSBCTTS
T ss_pred             HHHHHHhhhhhhhcccc-cCceEEEEeccCCHHHHhhhhhhHHHHhhcCCEEEEEeeeccCCCC-CCCCCCCcCcCCCCC
Confidence            99999998643322210 014555555554332  2233 999999999999999999999986 469999999976543


Q ss_pred             C-----------------------C--ccCHHHHHHHHHH-cCCCCCceeeeccccccceeccCCCCCCCCCCCCCCCC-
Q 008332          234 R-----------------------F--ARSTDQVLKAWIE-RGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL-  286 (570)
Q Consensus       234 ~-----------------------~--~~~v~~~v~~~~~-~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~-  286 (570)
                      .                       .  ..+++.+|++|++ .|+|++||+||||||||.|+++++.+++++++..+|+. 
T Consensus       237 ~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~v~~av~~~~~~~Gvp~~KlvlGip~YGr~w~~~~~~~~g~~~~~~~~~~~  316 (499)
T 1goi_A          237 PTFYNALREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGED  316 (499)
T ss_dssp             CCBCCGGGGSSCCCCHHHHHHHCCSSBCCCHHHHHHHHHTSTTCCGGGEEEEEESEEEEEESCCSSSTTTTCCCCCCCCS
T ss_pred             ccccccccccccccccccccccccccccccHHHHHHHHHHhcCCCHHHeEEEecccceeeEecCCCCCCCCCcccCCCCC
Confidence            2                       1  4589999999999 99999999999999999999998888888777665432 


Q ss_pred             ------------------CCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEee--cCCEEEeccCHHHHHHHHHhhhcc
Q 008332          287 ------------------YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFS--TGTVWFGFDDVEAVRAKIAYAKEK  346 (570)
Q Consensus       287 ------------------~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~--~~~~~i~ydd~~Si~~K~~~~~~~  346 (570)
                                        ..+|.++|.+||..+... ..++..||+.+..||+.  .+++||+|||++|++.|++||+++
T Consensus       317 ~~~~~~~~~~g~~~c~~~~~~g~~~y~ei~~~~~~~-~g~~~~~D~~~~~~y~y~~~~~~~vsydd~~Si~~K~~y~~~~  395 (499)
T 1goi_A          317 PYPSTDYWLVGCEECVRDKDPRIASYRQLEQMLQGN-YGYQRLWNDKTKTPYLYHAQNGLFVTYDDAESFKYKAKYIKQQ  395 (499)
T ss_dssp             SCSSSCCCSTTCHHHHHHTCTTEEEHHHHHHHHHTT-SSEEEEEETTTTEEEEEETTTTEEEECCCHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccCCCCcccHHHHHHhhhcC-CCceEEEccccceEEEEECCCCEEEEeeCHHHHHHHHHHHHhc
Confidence                              245689999999876632 23889999999999986  678999999999999999999999


Q ss_pred             CCceEEEEEccccChhhHHHHhhhcc
Q 008332          347 RLLGYYAWQVSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       347 gLgGv~~W~l~~Dd~~~~~~~~~~~~  372 (570)
                      ||||+|+|+|++||.+..|++++.+.
T Consensus       396 gLgGv~~W~l~~Dd~~~~Ll~ai~~~  421 (499)
T 1goi_A          396 QLGGVMFWHLGQDNRNGDLLAALDRY  421 (499)
T ss_dssp             TCCEEEEECGGGSCTTCHHHHHHHHH
T ss_pred             CCCceEEEeeccCCCCchHHHHHHHH
Confidence            99999999999999888888888764

>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A*

Probab=100.00  E-value=2.1e-62  Score=517.00  Aligned_cols=339  Identities=22%  Similarity=0.340  Sum_probs=269.5

Q ss_pred             CCCCeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCC-------------------------ceEEeeCCCc-
Q 008332           22 KAKPWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINST-------------------------TYQLSLSLPS-   71 (570)
Q Consensus        22 ~~~~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~-------------------------~~~~~~~~~~-   71 (570)
                      ..++++++|||++|+    .+++++||.++||||+|+|+.++.+                         .+.+...+++ 
T Consensus       131 ~~~~~~v~~Y~~~W~~y~~~~~~~~i~~~~~THi~yaF~~i~~~~~~n~~l~~~~g~~~~~~~~c~~~~~~~v~~~D~~a  210 (540)
T 1edq_A          131 QNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPFA  210 (540)
T ss_dssp             CCSSCEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEECBCCCTTTSGGGGGSTTHHHHHHHHTTTCCTTSBCCSCHHH
T ss_pred             CCCCcEEEEEECcccccCCCCChhHCCHhhCCEEEEeeecccCcccccccccccccchhhhhcccccccCcceEecChhH
Confidence            345678999999995    5789999999999999999998641                         1122222211 


Q ss_pred             ------------c---HHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcC-CCc
Q 008332           72 ------------D---ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG-FRG  135 (570)
Q Consensus        72 ------------~---~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~-~DG  135 (570)
                                  +   ...+.++. .||++||++|+++|||||..  +..|+.+ +++++|++||+++++||++|+ |||
T Consensus       211 d~~~~~~g~~~~~~~~~g~~~~l~-~lK~~~p~lKvllSiGGw~~--s~~F~~~-~~~~~R~~Fi~siv~~l~~yg~fDG  286 (540)
T 1edq_A          211 ALQKAQKGVTAWDDPYKGNFGQLM-ALKQAHPDLKILPSIGGWTL--SDPFFFM-GDKVKRDRFVGSVKEFLQTWKFFDG  286 (540)
T ss_dssp             HHTSCBTTBCSTTCSSCHHHHHHH-HHHHHCTTCEEEEEEECSSS--CGGGGGT-TSHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred             hhccccCCcccccccchhhHHHHH-HHHHhCCCCeEEEEEeCCcC--CCcchhh-cCHHHHHHHHHHHHHHHHHcCCCce
Confidence                        0   13466664 59999999999999999975  4568887 699999999999999999999 999


Q ss_pred             eeeeccCCC---------CCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhcee
Q 008332          136 LDFAWTAPN---------TSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWI  205 (570)
Q Consensus       136 idiDwE~p~---------~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i  205 (570)
                      ||||||||+         .++|+.+|+.|+++||++|++.....    +..+.|+++++.... ...++++++.+++|||
T Consensus       287 IDIDWEyP~~~g~~~~~g~~~D~~nf~~ll~eLr~~l~~~~~~~----g~~~~LT~Av~a~~~~~~~~d~~~l~~~vD~i  362 (540)
T 1edq_A          287 VDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVET----GRKYELTSAISAGKDKIDKVAYNVAQNSMDHI  362 (540)
T ss_dssp             EEEECSCTTSCSSCTTCCCTTHHHHHHHHHHHHHHHHHHHHHHH----TCCCEEEEEEECSHHHHTTSCHHHHGGGCSEE
T ss_pred             EEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcc----CCceEEEEEecCChhHhhcccHHHHHhhccEE
Confidence            999999995         35788999999999999998654322    223444554443321 2568899999999999


Q ss_pred             eeecccCCCCCCCCCCCCCCCCCCCCCC-CCccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCC--CCCCC
Q 008332          206 HAVTASYYEPVSTNFTAPPAALYGSISG-RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAA  282 (570)
Q Consensus       206 ~vm~yd~~~~~~~~~~~~~a~l~~~~~~-~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~--g~~~~  282 (570)
                      |||+||+||+|....+||+|||+..... ....+++.+|++|++.|+|++||+||||||||.|+++++...+.  ..++.
T Consensus       363 nlMtYD~~G~W~~~~~G~~apLy~~~~~~~~~~~v~~av~~~~~~gvp~~KivlGip~YGr~w~~~~~~~~~~~~~g~~~  442 (540)
T 1edq_A          363 FLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTAT  442 (540)
T ss_dssp             EEECCCSSCTTCSSSCCCSSCSSCCTTCTTCSCCHHHHHHHHHHHTCCGGGEEEEEESEEEEEESCBSCSTTCGGGSBCS
T ss_pred             EEeccccCCCCCCCCCCCcCCCCCCccCCCCCcCHHHHHHHHHHcCCCHHHEEEEeeccceeEeeccCCCCCCcccccCC
Confidence            9999999999876559999999976432 23458999999999999999999999999999999887532111  11122


Q ss_pred             CC--CCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeec--CCEEEeccCHHHHHHHHHhhhccCCceEEEEEccc
Q 008332          283 GP--ALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFST--GTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSF  358 (570)
Q Consensus       283 g~--~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~--~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~  358 (570)
                      ||  +++++|.++|.|||+.+...+  ++..||+.+..||...  +++||+|||++|++.|++|++++||||+|+|+|++
T Consensus       443 G~~~Gt~e~G~~~y~ei~~~~~~~g--~~~~~D~~~~~~y~y~~~~~~~vsydd~~Si~~K~~y~k~~gLgGv~~W~l~~  520 (540)
T 1edq_A          443 GPVKGTWENGIVDYRQIAGQFMSGE--WQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDA  520 (540)
T ss_dssp             EECCCSSBTTEEEHHHHHHHSSSTT--CEEEEETTTTEEEEEETTTTEEEECCCHHHHHHHHHHHHHHTCCEEEEECGGG
T ss_pred             CCccccccCCcccHHHHHHHhhcCC--ceEEECCccccceEEECCCCEEEEECCHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence            33  346789999999999876555  8899999999999864  47999999999999999999999999999999999


Q ss_pred             cChhhHHHHhhhcc
Q 008332          359 DDHDWLLSQAAAQK  372 (570)
Q Consensus       359 Dd~~~~~~~~~~~~  372 (570)
                      ||.  .|++++.+.
T Consensus       521 Dd~--~Ll~ai~~~  532 (540)
T 1edq_A          521 DNG--DILNSMNAS  532 (540)
T ss_dssp             CCS--HHHHHHHHH
T ss_pred             CCH--HHHHHHHHH
Confidence            984  566776653

>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A*

Probab=100.00  E-value=5.2e-62  Score=518.64  Aligned_cols=340  Identities=21%  Similarity=0.332  Sum_probs=267.9

Q ss_pred             CCCCeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCC-----------------------ceEEeeCCCcc--
Q 008332           22 KAKPWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINST-----------------------TYQLSLSLPSD--   72 (570)
Q Consensus        22 ~~~~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~-----------------------~~~~~~~~~~~--   72 (570)
                      ..++++++|||++|+    .+.+++||.++||||+|+|+.++.+                       .+.+...+++.  
T Consensus       134 ~~~~~~v~~Y~~~W~~y~~~~~~~~i~~~~~THI~yaF~~i~~~~~~l~~~~~~~~~~~~~~c~~~~~~~v~~~D~~~d~  213 (584)
T 3arx_A          134 TDPSIVMGTYFVEWGIYGRDYTVDNMPVDNLTHILYGFIPICGPNESVKSVGGNSFNALQTACRGVNDYEVVIHDPWAAY  213 (584)
T ss_dssp             CCTTSEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEECBSSCCGGGGGGCTTHHHHHHHHTTTCCTTCBCCSCHHHHH
T ss_pred             CCCCcEEEEEECcccccCCCCChhHCCHhhCCEEEEEEEEecCCCccccccCccchhhhhhhcccCCCcceEecCchHhh
Confidence            345678999999995    5889999999999999999998742                       11232222111  


Q ss_pred             ---------------HHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcC-CCce
Q 008332           73 ---------------ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG-FRGL  136 (570)
Q Consensus        73 ---------------~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~-~DGi  136 (570)
                                     ...+.++ ..||+++|++||++|||||..  +..|+.+ +++++|++||+++++||++|+ ||||
T Consensus       214 ~~~~~~~g~~w~~~~~g~~~~l-~~lK~~np~lKvllSiGGw~~--s~~F~~~-~~~~~R~~Fi~siv~~l~~yg~fDGI  289 (584)
T 3arx_A          214 QKSFPQAGHEYSTPIKGNYAML-MALKQRNPDLKIIPSIGGWTL--SDPFYDF-VDKKNRDTFVASVKKFLKTWKFYDGV  289 (584)
T ss_dssp             TSCCGGGTCCTTCSSCHHHHHH-HHHHHHCTTCEEEEEEEESSS--CGGGGGG-GSHHHHHHHHHHHHHHHHHCTTCCEE
T ss_pred             hhccccCCccccccccchHHHH-HHHHHhCCCCEEEEEEcCCcC--Ccchhhh-hCHHHHHHHHHHHHHHHHHcCCcceE
Confidence                           1245665 459999999999999999975  4568887 699999999999999999999 9999


Q ss_pred             eeeccCCCC---------C-CCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhcee
Q 008332          137 DFAWTAPNT---------S-TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWI  205 (570)
Q Consensus       137 diDwE~p~~---------~-~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i  205 (570)
                      |||||||+.         + +|+.+|+.|+++||++|++.....    +..+.|+++++.... ...+++.++.+++|||
T Consensus       290 DIDWEyP~~~g~~~~~g~p~~D~~nf~~ll~eLr~~l~~~~~~~----g~~~~LT~Av~a~~~~~~~~d~~~l~~~vD~i  365 (584)
T 3arx_A          290 DIDWEFPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAET----GRTYELTSAIGVGYDKIEDVDYADAVQYMDYI  365 (584)
T ss_dssp             EEEESCTTSCSSCTTCCCTTTHHHHHHHHHHHHHHHHHHHHHHH----SCCCEEEEEECCSHHHHTTSCHHHHGGGCSEE
T ss_pred             eecccCccccCCCCCCCCchHHHHHHHHHHHHHHHhHHhhhhcc----CCceEEEEEecCChHHhhccCHHHHHhhCCEE
Confidence            999999962         2 388999999999999998654332    223445555544322 2568899999999999


Q ss_pred             eeecccCCCCCCCCCCCCCCCCCCCCCC------------------CCccCHHHHHHHHHHcCCCCCceeeeccccccce
Q 008332          206 HAVTASYYEPVSTNFTAPPAALYGSISG------------------RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAW  267 (570)
Q Consensus       206 ~vm~yd~~~~~~~~~~~~~a~l~~~~~~------------------~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~  267 (570)
                      |||+|||||+|.. .+||+|||+.....                  ....+++.+|++|++.|+|++||+||||||||.|
T Consensus       366 nlMtYD~hG~W~~-~tG~~apLy~~~~~~~~~c~~~~v~~~~~~~~~~~~~v~~av~~~~~~Gvp~~KivLGip~YGr~w  444 (584)
T 3arx_A          366 FAMTYDFYGGWNN-VPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGW  444 (584)
T ss_dssp             EECCCCSSCTTSS-CCCCSSCSSCCTTSCTTTTTSCSBCTTSCBCCSCCSCHHHHHHHHHHTTCCGGGEEEEEESEEEEE
T ss_pred             EEecccccCCCCC-CcCCCCCCCCCCCCccccccccccccccccccccceeHHHHHHHHHHcCCCHHHEEEEEcccccee
Confidence            9999999999875 49999999975421                  1245899999999999999999999999999999


Q ss_pred             eccCCC-CCCCCCCC----CCCCC-------CCCCcccHHHHHHHHhhC---C-CCeEEeecCceEEEEeec--CCEEEe
Q 008332          268 TLVKPE-DNGIGAAA----AGPAL-------YDSGLVTYKKIKNHIKTY---G-PDVQVMYNSTYEVNYFST--GTVWFG  329 (570)
Q Consensus       268 ~~~~~~-~~~~g~~~----~g~~~-------~~~g~~~y~~i~~~~~~~---~-~~~~~~~d~~~~~~y~~~--~~~~i~  329 (570)
                      +++++. +...+++.    .|+.+       ++.|.++|+|||..+...   + ..++..||+.+..||...  +++||+
T Consensus       445 ~~~~~~~~~~~~~~~~g~~~G~~~gt~~~~~~~~G~~~y~ei~~~~~~~~~~g~~g~~~~~D~~a~~py~y~~~~~~~vs  524 (584)
T 3arx_A          445 EGVTPDTLTDPNDPMTGTATGKLKGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGELIT  524 (584)
T ss_dssp             ECCCGGGCSSTTCGGGSCCSEECCCCGGGTCSBTTEEEHHHHHHHTTTTTTSCCTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             eecccccccCCCCccccCCCCCcCCccccccccCCceeHHHHHHHhhcccccccCCcEEEECCccceeEEEECCCCEEEE
Confidence            987532 12222222    22222       678999999999976542   0 248899999999999864  579999


Q ss_pred             ccCHHHHHHHHHhhhccCCceEEEEEccccChhhHHHHhhhcc
Q 008332          330 FDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       330 ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~~~~~~~~~  372 (570)
                      |||++|++.|++|++++||||+|+|+|++||.  .|++++.+.
T Consensus       525 yDd~~Si~~K~~y~k~~gLgGv~~W~l~~Dd~--~Ll~ai~~~  565 (584)
T 3arx_A          525 FDDHRSVLAKGNYAKSLGLAGLFSWEIDADNG--DILNAMHEG  565 (584)
T ss_dssp             CCCHHHHHHHHHHHHHHTCCEEEEECGGGCCS--HHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhCCCCEEEEEeccCCcH--HHHHHHHHH
Confidence            99999999999999999999999999999984  566777654

>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A

Probab=100.00  E-value=3.5e-62  Score=499.61  Aligned_cols=332  Identities=23%  Similarity=0.347  Sum_probs=272.1

Q ss_pred             CeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCcc------------------HHHHHHHHHH
Q 008332           25 PWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSD------------------ENQIAKFADT   82 (570)
Q Consensus        25 ~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~   82 (570)
                      ++++||||++|+    .+.+++|+.++||||+|+|+.+++++ ++.+.+.+.                  ...+.++. .
T Consensus         2 ~~~vvgY~~~W~~y~~~~~~~~i~~~~~THi~yaF~~i~~~g-~v~~~d~~~d~~~~~~~~~w~~~~~~~~~~~~~l~-~   79 (392)
T 1ll7_A            2 GFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSG-EVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMY-L   79 (392)
T ss_dssp             CBEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEEEECTTS-CEEESCHHHHTTCCCTTCCSSCSSCCCCHHHHHHH-H
T ss_pred             CcEEEEEECchhhcCCCCChhhCCcccCCEEEEEEEEECCCC-eEEecChhhhhhcccCCccccccchhhhHHHHHHH-H
Confidence            578999999996    46799999999999999999999886 665543211                  13466665 4


Q ss_pred             HHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHH
Q 008332           83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA  162 (570)
Q Consensus        83 lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~  162 (570)
                      +|+++|++||++|||||..  +..|+.+++++++|++||+++++++++|+|||||||||||..++|+.+|+.|+++||++
T Consensus        80 lk~~~~~lKvllsiGG~~~--s~~f~~~~~~~~~r~~fi~siv~~l~~~~fDGiDiDwE~p~~~~d~~~~~~ll~eLr~~  157 (392)
T 1ll7_A           80 LKKNNRNLKTLLSIGGWTY--SPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQYPEDEKQANDFVLLLKACREA  157 (392)
T ss_dssp             HHHHCTTCEEEEEEEHHHH--GGGSHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCeEEEEEeCCCC--CchHhHHhCCHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCChHHHHHHHHHHHHHHHH
Confidence            9999999999999999864  46799999999999999999999999999999999999997677899999999999999


Q ss_pred             HhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC--CccCH
Q 008332          163 ATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR--FARST  239 (570)
Q Consensus       163 l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~--~~~~v  239 (570)
                      |++.......  +..+.++++++..+. ...|+++++.+++||||||+||+||+|.. .+||+|||+......  ...++
T Consensus       158 l~~~~~~~~~--~~~~~Ls~av~~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~w~~-~~g~~apl~~~~~~~~~~~~~v  234 (392)
T 1ll7_A          158 LDAYSAKHPN--GKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDK-VSGHMSNVFPSTTKPESTPFSS  234 (392)
T ss_dssp             HHHHHHTSTT--SCCCEEEEEEECSHHHHTTSCHHHHHTTCSEEEEECCCSSSTTSS-BCCCSSCSSCCSSCGGGCSCCH
T ss_pred             HHhhhhcccC--CCceEEEEEecCCHHHhccCCHHHHHHhhheeeEEeecccCCCCC-CCCCCCcCCCCCCCCccccccH
Confidence            9865443222  233445555444322 24689999999999999999999999864 699999999765431  23589


Q ss_pred             HHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCC--CCCCCCcccHHHHHHHHhhCCCCeEEeecCceE
Q 008332          240 DQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGP--ALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE  317 (570)
Q Consensus       240 ~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~--~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~  317 (570)
                      +.+|++|++.|+|++||+||||||||.|++.+    +.|++..|+  ++.+.|.++|.++++    .+  ++..||+.+.
T Consensus       235 ~~~v~~~~~~gvp~~KlvlGip~YGr~~~~~~----~~g~~~~g~~~g~~~~g~~~y~~l~~----~g--~~~~~D~~~~  304 (392)
T 1ll7_A          235 DKAVKDYIKAGVPANKIVLGMPLYGRAFASTD----GIGTSFNGVGGGSWENGVWDYKDMPQ----QG--AQVTELEDIA  304 (392)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEEESEEEEECSCS----STTSBCCCCCCBSSSTTEEEGGGCSC----TT--CEEEEETTTT
T ss_pred             HHHHHHHHHcCCChhHEEEEecccceeeeccC----CCCCcCCCCCCCCCccccccHHHHhh----CC--CeEEEecccc
Confidence            99999999999999999999999999998754    345554443  346778899987653    23  7899999999


Q ss_pred             EEEee--cCCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccCh-hhHHHHhhhccc
Q 008332          318 VNYFS--TGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDH-DWLLSQAAAQKD  373 (570)
Q Consensus       318 ~~y~~--~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~-~~~~~~~~~~~~  373 (570)
                      .||..  .+++||+|||++|++.|++||+++||||+|+|+|++||. .+.|++++.+.-
T Consensus       305 ~~y~y~~~~~~~v~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~~Ll~a~~~~l  363 (392)
T 1ll7_A          305 ASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGL  363 (392)
T ss_dssp             EEEEEETTTTEEEECCCHHHHHHHHHHHHHTTCCEEEEECTTSCCCGGGCHHHHHHHHT
T ss_pred             eeEEEECCCCEEEEeCCHHHHHHHHHHHHhCCCCeEEEEeecCCCCCcchHHHHHHHHh
Confidence            99876  378999999999999999999999999999999999995 477888887653

>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A*

Probab=100.00  E-value=8.4e-62  Score=500.59  Aligned_cols=334  Identities=21%  Similarity=0.329  Sum_probs=272.8

Q ss_pred             CCCeEEEEEecCCCC----CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCcc------------------HHHHHHHH
Q 008332           23 AKPWIRVGYLNLSEV----STISGINYDLFTHLICSSADINSTTYQLSLSLPSD------------------ENQIAKFA   80 (570)
Q Consensus        23 ~~~~~vvgY~~~~~~----~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~   80 (570)
                      .+++++||||++|+.    +.+++|+.++||||+|+|+.++++.+++.+.+.+.                  ...+.++.
T Consensus        40 ~~~~~vvgYy~~W~~y~r~~~~~~i~~~~~THI~yaF~~i~~~~g~v~~~d~~~d~~~~~~~~~w~~~~~~~~~~~~~l~  119 (433)
T 1w9p_A           40 SSGYRSVVYFVNWAIYGRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLY  119 (433)
T ss_dssp             BCCBEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEEEECTTTCCEEESCHHHHHTCCCTTCCSSCCSSCCCHHHHHHH
T ss_pred             CCCCEEEEEECchhhcCCCCChhHCCHhhCCEEEEEEEEecCCCCeeeecCchhhhhcccCCccccccchhhhHHHHHHH
Confidence            467899999999963    57999999999999999999998333666554221                  12455664


Q ss_pred             HHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHH
Q 008332           81 DTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWR  160 (570)
Q Consensus        81 ~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr  160 (570)
                       .+|+++|++||++|||||..  +..|+.+++++++|++||+++++++++|+|||||||||||..++|+.+|+.|+++||
T Consensus       120 -~lK~~~~~lKvllsiGGw~~--s~~fs~~~~~~~~R~~fi~siv~~l~~~gfDGIDiDwEyP~~~~d~~nf~~ll~eLr  196 (433)
T 1w9p_A          120 -LLKKQNRNLKVLLSIGGWTY--SPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVR  196 (433)
T ss_dssp             -HHHHHCTTCEEEEEEECTTT--GGGHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHH
T ss_pred             -HHHHhCCCCEEEEEEeCCCC--CcchhhHhcCHHHHHHHHHHHHHHHHhcCcCceeEEEEeccChhHHHHHHHHHHHHH
Confidence             49999999999999999874  467999999999999999999999999999999999999976778999999999999


Q ss_pred             HHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC--Ccc
Q 008332          161 IAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR--FAR  237 (570)
Q Consensus       161 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~--~~~  237 (570)
                      ++|++...+...  +..+.++++++.... ...||++++.+++||||||+||++|+|. ..+||+|||+......  ...
T Consensus       197 ~~l~~~~~~~~~--~~~~~Ls~avp~~~~~~~~~d~~~l~~~vD~inlMtYD~~G~w~-~~~g~~apL~~~~~~~~~~~~  273 (433)
T 1w9p_A          197 TALDSYSAANAG--GQHFLLTVASPAGPDKIKVLHLKDMDQQLDFWNLMAYDYAGSFS-SLSGHQANVYNDTSNPLSTPF  273 (433)
T ss_dssp             HHHHHHHHHHST--TCCCEEEEEECCSHHHHHHSCHHHHHTTCSEEEECCCCCSSTTS-SSCCCSSCSSCCTTCGGGCSC
T ss_pred             HHHHhhhhcccC--CCceEEEEEccCCHHHhhhCCHHHHHHhhheeeeeccccCCCCC-CCCCCCCcCCCCCCCCCCCcc
Confidence            999864433222  234455555544322 2468999999999999999999999986 4699999999765431  235


Q ss_pred             CHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCC--CCCCCCcccHHHHHHHHhhCCCCeEEeecCc
Q 008332          238 STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGP--ALYDSGLVTYKKIKNHIKTYGPDVQVMYNST  315 (570)
Q Consensus       238 ~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~--~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~  315 (570)
                      +++.+|++|++.|+|++||+||||||||.|++.+    +.|++..|+  ++.+.|.++|.++++    .+  ++..||+.
T Consensus       274 ~v~~~v~~~~~~Gvp~~KlvlGip~YGr~w~~~~----~~g~~~~g~~~g~~~~g~~~y~~l~~----~g--~~~~~D~~  343 (433)
T 1w9p_A          274 NTQTALDLYRAGGVPANKIVLGMPLYGRSFANTD----GPGKPYNGVGQGSWENGVWDYKALPQ----AG--ATEHVLPD  343 (433)
T ss_dssp             CHHHHHHHHHHTTCCGGGEEEEEESEEEEESSCS----STTSCCCCCCCCSSBTTEEEGGGCSC----TT--CEEEEEGG
T ss_pred             cHHHHHHHHHHcCCChhHEEEEecccceeeeccC----CCCCcccCCCCCCCccceeeHHHHHh----CC--CEEEeccc
Confidence            8999999999999999999999999999998754    345554443  346778899987653    23  78999999


Q ss_pred             eEEEEee--cCCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccCh-hhHHHHhhhcc
Q 008332          316 YEVNYFS--TGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDH-DWLLSQAAAQK  372 (570)
Q Consensus       316 ~~~~y~~--~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~-~~~~~~~~~~~  372 (570)
                      +..||..  .+++||+|||++|++.|++|++++||||+|+|++++||. .+.|++++.+.
T Consensus       344 ~~~~y~yd~~~~~~v~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~~Ll~ai~~~  403 (433)
T 1w9p_A          344 IMASYSYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSDKTGSDSLITTVVNA  403 (433)
T ss_dssp             GTEEEEEETTTTEEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGSCCGGGCHHHHHHHH
T ss_pred             cCcceEEECCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEEEeccCCCCCcchHHHHHHHH
Confidence            9999876  378999999999999999999999999999999999995 47788887765

>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A

Probab=100.00  E-value=9.3e-61  Score=500.17  Aligned_cols=333  Identities=16%  Similarity=0.226  Sum_probs=267.0

Q ss_pred             CCCeEEEEEecCCCCC-----------------cCCCC---CCCCcceEEEEeEEEeCCc--------------------
Q 008332           23 AKPWIRVGYLNLSEVS-----------------TISGI---NYDLFTHLICSSADINSTT--------------------   62 (570)
Q Consensus        23 ~~~~~vvgY~~~~~~~-----------------~~~~i---~~~~~Thii~~~~~~~~~~--------------------   62 (570)
                      .++++|+|||.+|..+                 ++..+   ++..||||||+|+.+..+.                    
T Consensus        97 ~~~~~v~~Y~~~W~~yd~r~~~~~~~~~~gr~~d~~~l~~~~p~~~t~ii~~F~~i~gd~~~g~~~~~i~~~~~~~~~d~  176 (574)
T 3oa5_A           97 DDDFNVLCYFTDWSQYDPRIINKEIRDTGGRSADILRLNTPDGRPFKRLIYSFGGLIGDKKYSADGNASIAVRLGVATDP  176 (574)
T ss_dssp             CSSCEEEEEEETTTTCCGGGTCSSCCSSCCCCCCGGGGCCSSSCSCSEEEEEEEEETTCTTTCTTTTHHHHHHHTSCSSH
T ss_pred             CCCceEEEEEcchhhcccccccccccccCCCccCHhhhccCCCccccEEEEEEEeecCCcccCchHHHHHHHHhhhcccc
Confidence            6779999999999655                 77788   8889999999999998765                    


Q ss_pred             --------eEEeeCCCcc---------------------------HHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccc
Q 008332           63 --------YQLSLSLPSD---------------------------ENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIY  107 (570)
Q Consensus        63 --------~~~~~~~~~~---------------------------~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f  107 (570)
                              +.+.+.+.+.                           ...+.++ ..||++||++|||+|||||..  +..|
T Consensus       177 ~~~~~~~~g~v~~~D~wad~~~~~n~g~~~~~~~~~~~~~~~~~~~G~~~~l-~~LK~~np~LKvllSIGGw~~--S~~F  253 (574)
T 3oa5_A          177 DDAIANHKGKTIPVDPDGAVLASINCGFTKWEAGDANERYNQEKAKGLLGGF-RLLHEADKELEFSLSIGGWSM--SGLF  253 (574)
T ss_dssp             HHHHHHHTTCEEESCHHHHHTCCTTTTCCSCCCCCHHHHCSTTTCCHHHHHH-HHHHHHCTTCEEEEEEECGGG--CTTH
T ss_pred             cccccCcCCeEeecCchhhhcccccccccccccCCccccccCccchhHHHHH-HHHHHHCCCCEEEEEECCCCC--cchh
Confidence                    2444333211                           1234555 459999999999999999875  5679


Q ss_pred             cccccChHHHHHHHHHHHHHHHHcC-CCceeeeccCCC--------CCCCccchhhhHHHHHHHHhhhhhcccccccceE
Q 008332          108 SSMVRNSSHRKSFIDSSIRIARLYG-FRGLDFAWTAPN--------TSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLL  178 (570)
Q Consensus       108 ~~~~~~~~~r~~fi~siv~~~~~~~-~DGidiDwE~p~--------~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~  178 (570)
                      +.+++++++|++||+++++||++|+ |||||||||||+        .++|+.+|+.|+++||+++.           ..+
T Consensus       254 s~~~s~~~~R~~Fi~siv~~l~~yg~fDGIDIDWEyP~~~g~~n~~~~~D~~nf~~LLkeLR~~~~-----------~~~  322 (574)
T 3oa5_A          254 SEIAKDEILRTNFVEGIKDFFQRFPMFSHLDIDWEYPGSIGAGNPNSPDDGANFAILIQQITDAKI-----------SNL  322 (574)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHCTTCCEEEEECSCTTSCTTTCCCCTTHHHHHHHHHHHHHHTCC-----------TTC
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEeccccccCCCCCHHHHHHHHHHHHHHHHhcc-----------CCc
Confidence            9999999999999999999999998 999999999996        46788999999999998332           223


Q ss_pred             E-EEeecccCCC-CCccChHHHh-hhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC-CccCHHHHHHHHHH-cCCCC
Q 008332          179 I-LTARFRYSPP-ANSYLLNSIQ-RNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR-FARSTDQVLKAWIE-RGLSA  253 (570)
Q Consensus       179 ~-~~~~~~~~~~-~~~~~~~~l~-~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~-~~~~v~~~v~~~~~-~gvp~  253 (570)
                      . |++++++... ...+|+.++. +++||||||+||+||+|+. .+||+|||+...... ...+++.+|++|++ .|+|+
T Consensus       323 ~~LSiAvpa~~~~~~~~d~~~l~~~~vD~InlMtYD~~G~W~~-~tG~~apL~~~~~d~~~~~svd~aV~~~l~~~GvP~  401 (574)
T 3oa5_A          323 KGISIASSADPAKIDAANIPALMDAGVTGINLMTYDFFTLGDG-KLSHHTNIYRDPSDVYSKYSIDDAVTHLIDEKKVDP  401 (574)
T ss_dssp             CEEEEEECSSHHHHHHHTHHHHHHTTCCEEEECCCCCCCTTSS-BCCCSSCSCCCTTCSSSCCCHHHHHHHHHHTTCCCG
T ss_pred             eEEEEEccCccccccccCHHHHHhhhCCEEEEEccccCCCCCC-CCCCCCCCCCCCCCccccccHHHHHHHHHHhcCCCH
Confidence            3 5555544322 2458899986 6999999999999999875 699999999765432 35689999999999 99999


Q ss_pred             CceeeeccccccceeccCCCCC-CCCCCC--------CCCCCCCCCcccHHHHHHHHhh-----CCCCeEEeecCceEEE
Q 008332          254 DKLVMCLPFYGYAWTLVKPEDN-GIGAAA--------AGPALYDSGLVTYKKIKNHIKT-----YGPDVQVMYNSTYEVN  319 (570)
Q Consensus       254 ~KlvlGip~yG~~~~~~~~~~~-~~g~~~--------~g~~~~~~g~~~y~~i~~~~~~-----~~~~~~~~~d~~~~~~  319 (570)
                      +||+||||||||.|++++..+. ..+++.        .++++.++|.++|.|||.....     ....++..||+.+..|
T Consensus       402 ~KLvLGip~YGR~w~~~~~~~~~~~~~p~~G~~~~~g~~~Gt~e~G~l~y~eI~~~~l~~~~~~~~~g~~~~wD~~a~~p  481 (574)
T 3oa5_A          402 KAIFIGYAGYTRNAKNATITTSIPSEEALKGTYTDANQTLGSFEYSVLEWTDIICHYMDFEKGEGRNGYKLVHDKVAKAD  481 (574)
T ss_dssp             GGEEEEEESBCEEESSEEECCSSTTTSCCCEEESCCTTCCBSSBTTBCBHHHHHHHTEETTTTEESTTCEEEEETTTTEE
T ss_pred             HHEEEEeCccceeeecCCCCcccccCCCCCCccccCCCCCCcccCCceeHHHHHHHhhhhhhhhccCCceEEEchhcCce
Confidence            9999999999999998764432 112221        1245678899999999865421     1124889999999999


Q ss_pred             Eeec--CCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhhHHHHhhhcc
Q 008332          320 YFST--GTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       320 y~~~--~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~~~~~~~~~  372 (570)
                      |+..  +++||+|||++|+++|++||+++||||+|+|+|++|  ++.|++++...
T Consensus       482 Y~y~~~~~~~VsYDD~~Si~~K~~yak~~gLGGv~iW~ld~D--~g~LlnAi~~~  534 (574)
T 3oa5_A          482 YLYSEATKVFISLDTPRSVRDKGRYVKDKGLGGLFIWSGDQD--NGILTNAAHEG  534 (574)
T ss_dssp             EEECTTTCCEEEECCHHHHHHHHHHHHHHTCCEEEEETGGGC--CSHHHHHHHHH
T ss_pred             EEEECCCCEEEEeCCHHHHHHHHHHHHhcCCCEEEEEeccCC--cHHHHHHHHHH
Confidence            9864  468999999999999999999999999999999999  56777877754

>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}

Probab=100.00  E-value=9.1e-57  Score=447.47  Aligned_cols=298  Identities=15%  Similarity=0.239  Sum_probs=238.4

Q ss_pred             CCCCCCeEEEEEecCCCC---CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEE
Q 008332           20 PAKAKPWIRVGYLNLSEV---STISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSI   96 (570)
Q Consensus        20 ~~~~~~~~vvgY~~~~~~---~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsi   96 (570)
                      ++.....+++|||++|+.   +...+.+..+||||+++|+.++++| ++..... + .   .+++.+|  .+++|++++|
T Consensus         2 ~~~~~~~~vvgYy~~w~~~~~~~~l~~~~~~lthi~~~~~~i~~~g-~l~~~~~-~-~---~~~~~~~--~~~~kv~lsi   73 (319)
T 3cz8_A            2 SLSNYIAGTLSFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNG-DIANQLN-D-A---AAIETTW--QRRVTPLATI   73 (319)
T ss_dssp             --CCSCCEEEEEEEEECGGGC------CCCCCCEEEEEEEEBCTTS-CBCCCCS-C-H---HHHHHHH--HTTCEEEEEE
T ss_pred             CccCCCceEEEEEecCCCccCHHHHHHhhCCCCEEEEeEEEECCCC-CEecCcC-C-H---HHHHHHH--HCCCeEEEEE
Confidence            456677899999999863   4444556789999999999999987 5544432 2 2   3444344  3589999999


Q ss_pred             cCCCC--CCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccc
Q 008332           97 GQGKD--TNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQ  174 (570)
Q Consensus        97 gg~~~--~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~  174 (570)
                      |||.+  .++..|+.+++++++|++||+++++++++|||||||||||+| .++|+.+|+.|+++||++|+..        
T Consensus        74 gg~~~~~~~~~~~~~~~~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p-~~~d~~~~~~ll~eLr~~l~~~--------  144 (319)
T 3cz8_A           74 TNLTSGGFSTEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTIDFEQV-SAADRDLFTGFLRQLRDRLQAG--------  144 (319)
T ss_dssp             ECEETTEECHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEEECCSC-CGGGHHHHHHHHHHHHHHHHHT--------
T ss_pred             ecCCCCCcCHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCCeEEEeccCC-CHHHHHHHHHHHHHHHHHHhhc--------
Confidence            98642  245678999999999999999999999999999999999999 4688999999999999999731        


Q ss_pred             cceEEEEeecccCC-----CCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHc
Q 008332          175 QSLLILTARFRYSP-----PANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIER  249 (570)
Q Consensus       175 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~  249 (570)
                      +  +.+++++++..     ....||++++.+++|||+||+||++++|.  .+||+||++         +++.++++|++.
T Consensus       145 ~--~~Ls~av~~~~~~~~~~~~~~d~~~l~~~vD~i~vMtYD~~g~~~--~~g~~apl~---------~v~~~v~~~~~~  211 (319)
T 3cz8_A          145 G--YVLTIAVPAKTSDNIPWLRGYDYGGIGAVVNYMFIMAYDWHHAGS--EPGPVAPIT---------EIRRTIEFTIAQ  211 (319)
T ss_dssp             T--CEEEEEEECCSCSCCGGGTTCCHHHHHHHCSEEEEECCCSSCTTS--CSCCSSCHH---------HHHHHHHHHTTT
T ss_pred             C--cEEEEEecCCcccccchhcccCHHHHHhhCCEEEEEeeccCCCCC--CCCCCCChH---------HHHHHHHHHHhc
Confidence            3  34444444433     23679999999999999999999999874  489999986         799999998875


Q ss_pred             CCCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeec----C-
Q 008332          250 GLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFST----G-  324 (570)
Q Consensus       250 gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~----~-  324 (570)
                       +|++||+||||+|||.|++.++    .|.        ..+.++|.|+|+.+...+  ++..||+.+..||+.+    + 
T Consensus       212 -vp~~KlvlGip~YGr~w~~~~~----~g~--------~~~~~~~~ei~~~~~~~g--~~~~~D~~~~~~y~~~~d~~g~  276 (319)
T 3cz8_A          212 -VPSRKIIIGVPLYGYDWIIPYQ----PGT--------VASAISNQNAIERAMRYQ--APIQYSAEYQSPFFRYSDQQGR  276 (319)
T ss_dssp             -SCGGGEEEECCSCEEEEESSCC----TTC--------CCEEECHHHHHHHHHHTT--CCCEEETTTTEEEEEEECTTSC
T ss_pred             -CCHHHEEEEecCcCCcccccCC----CCC--------CCCccCHHHHHHHHHHcC--CeEEechhhCCcEEEEEcCCCC
Confidence             9999999999999999997642    111        146799999999888776  7788999999999853    2 


Q ss_pred             CEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChh
Q 008332          325 TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD  362 (570)
Q Consensus       325 ~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~  362 (570)
                      ++||+|||++|++.|++|++++||||+|+|+|++||+-
T Consensus       277 ~~~v~ydd~~Si~~K~~~~~~~~LgGv~~W~l~~dd~~  314 (319)
T 3cz8_A          277 THEVWFEGVRSMSRKMQIVREYRLQAIGAWQLTLAEGH  314 (319)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHTTCSEEEEEEEEEC---
T ss_pred             EEEEEecCHHHHHHHHHHHHhcCCCeEEEEECCCCCcc
Confidence            37999999999999999999999999999999999864

>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A

Probab=100.00  E-value=8.6e-56  Score=438.65  Aligned_cols=290  Identities=19%  Similarity=0.286  Sum_probs=235.1

Q ss_pred             CCeEEEEEecCCC--CCc-CCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCC
Q 008332           24 KPWIRVGYLNLSE--VST-ISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGK  100 (570)
Q Consensus        24 ~~~~vvgY~~~~~--~~~-~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~  100 (570)
                      ++++|||||+.|+  ... +++||+++||||+|+|+.++++| .+...+  +...+.++++  |+++|++||++|||||.
T Consensus         2 s~krvvgY~~~~~~~~~~~~~~i~~~~~Thi~~af~~i~~~g-~~~~~~--~~~~~~~~~~--k~~~~~lkvllsiGG~~   76 (312)
T 3fnd_A            2 SLKVVIGYLALDDWEFESLFPTIEWKYLTHINASFARVKADG-TLNINP--VRKRIESVRE--TAHKHNVKILISLAKNS   76 (312)
T ss_dssp             CCCEEEEEEETTCTTHHHHGGGCCGGGCSEEEEEEEEECTTS-CEECTT--TTTTHHHHHH--HHHHTTCEEEEEEEESS
T ss_pred             CCceEEEEEeccccccCCChhhCCcccCCEEEEEEEEECCCC-eEEecC--cHHHHHHHHH--HHHcCCCEEEEEEcCCC
Confidence            4689999998775  233 79999999999999999999987 555543  3345677765  67789999999999985


Q ss_pred             CCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeecc-CCCCCCCccchhhhHHHHHH-HH-hhhhhcccccccce
Q 008332          101 DTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT-APNTSTDMFNIGLLFDEWRI-AA-TKLDAKNSTRQQSL  177 (570)
Q Consensus       101 ~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE-~p~~~~~~~~~~~l~~~lr~-~l-~~~~~~~~~~~~~~  177 (570)
                         +..|+.+++++++|++||+++++++++|+||||||||| ||..   ..+|+.|+++||+ +| +          ...
T Consensus        77 ---~~~~~~~~~~~~~r~~fi~si~~~~~~~~~DGiDiDwE~~p~~---~~~~~~ll~eLr~~~l~~----------~~~  140 (312)
T 3fnd_A           77 ---PGEFTTAINDPKARKELIQQIIAFTKEYKLDGFDIDYEEYDNW---DKNFPSLLVFARGLYLAK----------EKN  140 (312)
T ss_dssp             ---TTHHHHHHHSHHHHHHHHHHHHHHHHHTTCSEEEECCCCCTTH---HHHHHHHHHHHHHHHHHS----------CTT
T ss_pred             ---CchhhHHhCCHHHHHHHHHHHHHHHHHcCCCeEEEeeeeCCCc---hHHHHHHHHHHHHHHhcc----------cCC
Confidence               34588999999999999999999999999999999999 9953   2899999999999 99 3          223


Q ss_pred             EEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHH-HcCCCCCce
Q 008332          178 LILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWI-ERGLSADKL  256 (570)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~-~~gvp~~Kl  256 (570)
                      +.++++++..  ...|+ .++.+++|||+||+||+ |+|. ..+||+||++         +++.++++|+ +.|+|++||
T Consensus       141 ~~ls~av~~~--~~~~~-~~~~~~~D~i~vm~YD~-g~~~-~~~g~~apl~---------~~~~~v~~~~~~~g~p~~Kl  206 (312)
T 3fnd_A          141 MLMTCAVNSR--WLNYG-TEWEQYFDYINLMSYDR-GAFT-DKPVQHASYD---------DFVKDLKYWNEQCRASKSKI  206 (312)
T ss_dssp             CEEEEEECCS--SSCCT-TTSGGGCSEEEECCCCT-TCSS-SSCCCSSCHH---------HHHHHHHHHHHTSCCCGGGE
T ss_pred             cEEEEEecCC--ccccc-HHHHhhCCEEEEeeccC-CCCC-CCCCCCCchH---------HHHHHHHHHHHHcCCCHHHE
Confidence            4455555542  23455 67899999999999999 8774 5699999987         7899999999 899999999


Q ss_pred             eeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHH
Q 008332          257 VMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAV  336 (570)
Q Consensus       257 vlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si  336 (570)
                      +||||+|||.|++..+     |      ....++.++|.+||+.....     ..|++         +..||+|||++|+
T Consensus       207 vlGip~YGr~w~~~~~-----g------~~~~~~~~~y~ei~~~~~~~-----~~~~d---------~~~~v~ydd~~Si  261 (312)
T 3fnd_A          207 VGGLPFYGYSWEESLQ-----G------AVDDVRGIRYSGILKHLGNE-----AADKD---------NIGKTYYNGRPTI  261 (312)
T ss_dssp             EEEEESEEEECCGGGT-----T------SSCTTSEEEHHHHHHHHCGG-----GGGCS---------EETTEECCCHHHH
T ss_pred             EEEEcccCceeecCCC-----C------CCCCCCceeHHHHHHhcCCc-----eEEec---------CCeEEEcCCHHHH
Confidence            9999999999988642     1      12356789999999864321     11211         1236889999999


Q ss_pred             HHHHHhhhccCCceEEEEEccccCh-hhHHHHhhhccc
Q 008332          337 RAKIAYAKEKRLLGYYAWQVSFDDH-DWLLSQAAAQKD  373 (570)
Q Consensus       337 ~~K~~~~~~~gLgGv~~W~l~~Dd~-~~~~~~~~~~~~  373 (570)
                      +.|++|++++||||+|+|++++||+ +..+++++.+..
T Consensus       262 ~~K~~~~~~~gLgGv~~W~l~~Dd~~~~~Ll~ai~~v~  299 (312)
T 3fnd_A          262 ANKCKFIKENDYAGVMIWQLFQDAHNDNYDLKLINVVG  299 (312)
T ss_dssp             HHHHHHHHHTTCCEEEEECGGGSCCGGGGGGCHHHHHH
T ss_pred             HHHHHHHHhcCCcEEEEEeCcCCCCCCccHHHHHHHhh
Confidence            9999999999999999999999998 577888888753

>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.3e-56  Score=451.63  Aligned_cols=295  Identities=13%  Similarity=0.189  Sum_probs=239.0

Q ss_pred             CCeEEEEEecCCCC--CcCCCCCCCCcceEEEEeEEEeCCc-eEEeeCCCccHHHHHHHHHHHHhhCCCceEEE--EEcC
Q 008332           24 KPWIRVGYLNLSEV--STISGINYDLFTHLICSSADINSTT-YQLSLSLPSDENQIAKFADTVKKKNPSITTIL--SIGQ   98 (570)
Q Consensus        24 ~~~~vvgY~~~~~~--~~~~~i~~~~~Thii~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvll--sigg   98 (570)
                      .+.+++|||++|+.  +.+.+++.++||||+|+|+.+++++ ..+...+..+. . ...++.+|+++|++||++  +|||
T Consensus        77 ~~~~vvgY~~~W~~~~~~~~~~~~~~lThi~~af~~i~~~g~~~l~~~~~~d~-~-~~~~~~lk~~~~~lkvl~~isiGG  154 (393)
T 3bxw_B           77 FAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDV-D-QGWMRAVRKHAKGLHIVPRLLFED  154 (393)
T ss_dssp             CCSCEEEEEBTTBTHHHHHHHHHGGGCSEEEECCEEEEEEETTEEEEECGGGC-C-HHHHHHHHHHSSSCEECCEEEECS
T ss_pred             CCCcEEEEECCccCCCCChhhcCHhhCCEEEEEEEEEecCCCceEEecCCCcc-C-HHHHHHHHhhCCCCEEEEEEeECC
Confidence            35789999999974  6788899999999999999999886 45554432221 1 244566999999999995  8899


Q ss_pred             CCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeee-ccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccce
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFA-WTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSL  177 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiD-wE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~  177 (570)
                      |+   ...|+.+++++++|++||+++++++++||||||||| ||||. ++++.+|+.|+++||++|+..        +..
T Consensus       155 w~---~~~f~~~~~~~~~R~~fi~siv~~~~~~gfDGidiDfWE~p~-~~d~~~~~~ll~eLr~~l~~~--------~~~  222 (393)
T 3bxw_B          155 WT---YDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLL-SQKRVGLIHMLTHLAEALHQA--------RLL  222 (393)
T ss_dssp             CC---HHHHHHHHTCHHHHHHHHHHHHHHHHHHTCCEEEEECGGGCC-C-CHHHHHHHHHHHHHHHHHT--------TCE
T ss_pred             CC---HHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCCEEecccccCC-hhhHHHHHHHHHHHHHHHhhc--------CcE
Confidence            86   347999999999999999999999999999999999 99995 678999999999999999831        334


Q ss_pred             EEEEeecccCC------CCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCC
Q 008332          178 LILTARFRYSP------PANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGL  251 (570)
Q Consensus       178 ~~~~~~~~~~~------~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gv  251 (570)
                      ++++++....+      ....||++++.+++||+|+|+||++|+   +.+||+|||+         +++.+|++|++.|+
T Consensus       223 Lsiav~~~~~~~~~~~~~~~~~d~~~l~~~vD~inlMtYD~~g~---~~~G~~apL~---------~v~~~v~~~~~~gv  290 (393)
T 3bxw_B          223 ALLVIPPAITPGTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTA---HQPGPNAPLS---------WVRACVQVLDPKSK  290 (393)
T ss_dssp             EEEEECCSBCTTTSSBCSSCHHHHHHHTTTCSEEEECCCCCCBT---TBCCCSSCHH---------HHHHHHHHHSTTCS
T ss_pred             EEEEEcccccccccccccccccCHHHHHhhccEEEEEeeecCCC---CCCCCcCCHH---------HHHHHHHHHHHcCC
Confidence            44444333111      134688999999999999999999984   5699999998         79999999999999


Q ss_pred             CCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEee-----cCCE
Q 008332          252 SADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFS-----TGTV  326 (570)
Q Consensus       252 p~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~-----~~~~  326 (570)
                      |++||+||||+|||.|+..++    .|    ++.    ....|.+||..   .+  ++..||+.++.||+.     .+++
T Consensus       291 p~~KivlGip~YGr~w~~~~~----~g----~~~----t~~~y~~i~~~---~g--~~~~~D~~~~~~~~~y~d~~~~~~  353 (393)
T 3bxw_B          291 WRSKILLGLNFYGMDYATSKD----AR----EPV----VGARYIQTLKD---HR--PRMVWDSQASEHFFEYKKSRSGRH  353 (393)
T ss_dssp             SGGGEEEEEESSEEEEETTTT----EE----EEE----CHHHHHHHHHH---HC--CBCEEETTTTEEEEEEEETTTEEE
T ss_pred             CHHHEEEEecccccccccCCC----CC----Ccc----CHHHHHHHHHh---cC--CceEEccccCCceEEEEecCCCCE
Confidence            999999999999999986431    11    110    11367777754   33  678899999988753     3578


Q ss_pred             EEeccCHHHHHHHHHhhhccCCceEEEEEccccChh
Q 008332          327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD  362 (570)
Q Consensus       327 ~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~  362 (570)
                      ||+|||++|+++|++|++++|| |+|+|++++||..
T Consensus       354 ~v~ydd~~Si~~K~~~~~~~gL-Gv~~W~l~~d~~~  388 (393)
T 3bxw_B          354 VVFYPTLKSLQVRLELARELGV-GVSIWELGQGLDY  388 (393)
T ss_dssp             EEECCCHHHHHHHHHHHHHHTC-EEEEECTTSSCGG
T ss_pred             EEEeCCHHHHHHHHHHHHHcCC-EEEEEECCCCchh
Confidence            9999999999999999999999 9999999999865

>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5

Probab=100.00  E-value=8.7e-40  Score=319.51  Aligned_cols=211  Identities=14%  Similarity=0.109  Sum_probs=164.7

Q ss_pred             eEEEEEe-cCCCCCcCCCCC------CCCcceEEEEeEEEeCCc---eEEeeCCCccHH--HHHHHHHHHHhhCCCceEE
Q 008332           26 WIRVGYL-NLSEVSTISGIN------YDLFTHLICSSADINSTT---YQLSLSLPSDEN--QIAKFADTVKKKNPSITTI   93 (570)
Q Consensus        26 ~~vvgY~-~~~~~~~~~~i~------~~~~Thii~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~lk~~~~~~kvl   93 (570)
                      +.-.-|+ .....+.+++||      .++||||+|+|+.++++.   .+..+.+.+++.  .+.++ ..+|+++|++||+
T Consensus         3 ~~~~~Y~g~~~~~~~~~di~~~~~~~~~~~THi~yaFa~~~~~~~~~~~g~~~~~~~d~~~~~~~~-~~lk~~~~~~Kvl   81 (290)
T 1nar_A            3 PIFREYIGVKPNSTTLHDFPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKV-KNLKRRHPEVKVV   81 (290)
T ss_dssp             CEEEEEESCCTTCCSCSSCCSTTCCCSSSEEEEEEEEEEEEECTTSCEEEEEEECSCHHHHSHHHH-HHHHHHCTTCEEE
T ss_pred             cchheeeccCCCCCCHhHCCcccccCcccCcEEEEEeeeecCccccCCCceecccccccccCHHHH-HHHHHHCCCceEE
Confidence            3444577 566789999999      788999999999998720   022233333333  25565 5599999999999


Q ss_pred             EEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcC------CCceeeeccCCCCCCCccchhhhHHHHHHHHhhhh
Q 008332           94 LSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG------FRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLD  167 (570)
Q Consensus        94 lsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~------~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~  167 (570)
                      +|||||..+  ..|+. +++++.|++|++++++++++||      |||||||||+|+  .| .+|+.|+++||++|++. 
T Consensus        82 lSiGG~~~s--~~fs~-~~~~~~r~~f~~s~~~~~~~~g~~~~~~fDGiDiDwE~p~--~d-~~~~~ll~~Lr~~l~~~-  154 (290)
T 1nar_A           82 ISIGGRGVN--TPFDP-AEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHIR--SD-EPFATLMGQLITELKKD-  154 (290)
T ss_dssp             EEEEESSTT--SCBCB-SCHHHHHHHHHHHHHHHHHHSEETTEECCCEEEEEESCBC--SS-TTHHHHHHHHHHHHHHC-
T ss_pred             EEEECCCCC--CCeec-cCCHHHHHHHHHHHHHHHHHhCCCcCCccceEEEeccCCC--Ch-HHHHHHHHHHHHHhhhc-
Confidence            999998753  36877 5789999999999999999999      999999999985  34 99999999999999742 


Q ss_pred             hcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHH
Q 008332          168 AKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWI  247 (570)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~  247 (570)
                             ...+.+++++++......++++.+.+++|||++|+||+|++|...                 .+++.++++|+
T Consensus       155 -------~~~~~l~a~vap~~~~~~~~~~~l~~~~D~i~vM~YD~~g~~~~~-----------------~~~~~~v~~~~  210 (290)
T 1nar_A          155 -------DDLNINVVSIAPSENNSSHYQKLYNAKKDYINWVDYQFSNQQKPV-----------------STDDAFVEIFK  210 (290)
T ss_dssp             -------TTSCCCEEEECCCTTTHHHHHHHHHHHTTTCCEEEEEGGGCSSCC-----------------CSHHHHHHHHH
T ss_pred             -------cCceeEEEEeCCCcccccCcHHHHHHhCCEEEEEeecCCCCCCCC-----------------CCHHHHHHHHH
Confidence                   121222333223222267899999999999999999999987531                 28999999999


Q ss_pred             HcC--CCCCceeeecccccccee
Q 008332          248 ERG--LSADKLVMCLPFYGYAWT  268 (570)
Q Consensus       248 ~~g--vp~~KlvlGip~yG~~~~  268 (570)
                      +.|  +|++||+||+|+||+.|.
T Consensus       211 ~~~~gvp~~Ki~lGlp~yg~~~~  233 (290)
T 1nar_A          211 SLEKDYHPHKVLPGFSTDPLDTK  233 (290)
T ss_dssp             HHHHHSCTTCEEEEEECCHHHHH
T ss_pred             HhccCCCHHHEEEEEeccCCccc
Confidence            854  999999999999999983

>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus}

Probab=100.00  E-value=4.5e-38  Score=304.92  Aligned_cols=196  Identities=14%  Similarity=0.189  Sum_probs=152.1

Q ss_pred             CCcCCCCCCCC-cceEEEEeEEEeCCceEE-------eeCCCcc-HHH-HHHHHHHHHhhCCCceEEEEEcCCCCCCccc
Q 008332           37 VSTISGINYDL-FTHLICSSADINSTTYQL-------SLSLPSD-ENQ-IAKFADTVKKKNPSITTILSIGQGKDTNYSI  106 (570)
Q Consensus        37 ~~~~~~i~~~~-~Thii~~~~~~~~~~~~~-------~~~~~~~-~~~-~~~~~~~lk~~~~~~kvllsigg~~~~~~~~  106 (570)
                      .+...+|++.+ ||||||+|+ ++.++ .+       .+...++ +.. +.++ ..+|+++|++||++|||||+.+.+..
T Consensus        16 ~~~d~pid~~l~ctHliyaFa-i~~~~-~~~~~~~~g~~~~~w~~~~~~~~~~-~~lK~~~~~lKvllSiGG~~~~~~~~   92 (275)
T 3sim_A           16 KFSDVPINPHITKFQFVLSFA-VDYTA-SSPHTSTNGKFNVFWDSSILGPDQI-SAIKSSHPNVRVAVSLGGASVGSNTV   92 (275)
T ss_dssp             CGGGSCCCTTCSEEEEEEEEE-ESBCS-SSSCCBCTTCCEECSCTTTSCHHHH-HHHHHHCTTEEEEEEEECSEETTEEC
T ss_pred             CCccCCCCCCccccEEEEEEE-ecccC-ccccCCCCCccccccccccccHHHH-HHHHHhCCCCEEEEEEcCCCCCCcch
Confidence            55666778899 999999999 88543 22       1111222 222 4555 56999999999999999998655555


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeeccc
Q 008332          107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRY  186 (570)
Q Consensus       107 f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~  186 (570)
                      |..++++++.|++||+++++++++|||||||||||+|+ ++|+.+|+.|+++||.++++         ...+++++..+.
T Consensus        93 ~~~~~~~~~~r~~fi~si~~~l~~~gfDGiDiDwE~p~-~~d~~~~~~ll~eLr~~l~~---------~~~ls~a~~~p~  162 (275)
T 3sim_A           93 QFQAASVDSWVSNAVTSLTRIIQRYNLDGIDIDYEHFQ-NTDKNTFAECIGRLITTLKK---------NGVISFASISPF  162 (275)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHHTTCCEEEEECCCCT-TSCHHHHHHHHHHHHHHHHH---------TTSCSEEEECCC
T ss_pred             hhhhhcCHHHHHHHHHHHHHHHHHhCCCeEEEEeecCC-cccHHHHHHHHHHHHHHhcc---------CCeEEEEEcCCh
Confidence            67888899999999999999999999999999999994 57889999999999999974         222444333332


Q ss_pred             CCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCC--CCCceeeeccccc
Q 008332          187 SPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGL--SADKLVMCLPFYG  264 (570)
Q Consensus       187 ~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gv--p~~KlvlGip~yG  264 (570)
                       .....++++.+.+++|+|++|+||+|+ |..                 ..+++.++++|.+.|.  |++||+||+|+++
T Consensus       163 -~~~~~~~~~~~~~~~D~i~vm~YD~~~-~~~-----------------~~~~~~~v~~~~~~g~~~p~~KlvlGlpa~~  223 (275)
T 3sim_A          163 -PSVDEYYLALFNEYKNAINHINYQFKA-YDS-----------------STSVDKFLGYYNNAASKYKGGNVLISFSTGP  223 (275)
T ss_dssp             -GGGHHHHHHHHHHSGGGCCEEECCGGG-SCT-----------------TCCHHHHHHHHHHHHHHTTTSCEEEEEECSS
T ss_pred             -HHhhhccHHHHHHhCCEEEEEeccCCC-CCC-----------------CccHHHHHHHHHHHhccCChhheEEEEeecC
Confidence             222344588999999999999999994 321                 1278999999999888  9999999999875

>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A*

Probab=100.00  E-value=9.7e-37  Score=303.33  Aligned_cols=217  Identities=15%  Similarity=0.217  Sum_probs=158.4

Q ss_pred             CCCCeEEEEEecCCCC----CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCc-cHHHHHHHHHHHHhhCCCceEEEEE
Q 008332           22 KAKPWIRVGYLNLSEV----STISGINYDLFTHLICSSADINSTTYQLSLSLPS-DENQIAKFADTVKKKNPSITTILSI   96 (570)
Q Consensus        22 ~~~~~~vvgY~~~~~~----~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lk~~~~~~kvllsi   96 (570)
                      ..+++++||||.+|+.    +++++|+..+ |||+|+|+.++.++..+.+.+.. .+..+.+.++.+|++  ++||++||
T Consensus         3 ~~~~~~vvgYy~~~~~~~~~~~~~~i~~~l-thi~~aF~~~~~~~~~~~~~~~~~~~~~~~~~i~~~k~~--g~kvllsi   79 (333)
T 3n12_A            3 NLGSKLLVGYWHNFDNGTGIIKLKDVSPKW-DVINVSFGETGGDRSTVEFSPVYGTDADFKSDISYLKSK--GKKVVLSI   79 (333)
T ss_dssp             CCCSSEEEEEEESSCSSSCCCCGGGSCTTC-SEEEEEEEEECTTSCSEECCCSSSCHHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCCCCEEEEEECcccCCCCccCHHHCCCCC-cEEEEEEEEecCCCCeEEecCCccchHHHHHHHHHHHhC--CCeEEEEe
Confidence            4567899999999963    7899998754 99999999999876555554322 334455556668776  69999999


Q ss_pred             cCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC---------CCCccchhhhHHHHHHHHhhhh
Q 008332           97 GQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT---------STDMFNIGLLFDEWRIAATKLD  167 (570)
Q Consensus        97 gg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~---------~~~~~~~~~l~~~lr~~l~~~~  167 (570)
                      |||.      ++.+++++++|++||+++++++++|+|||||||||+|..         ++|+.+|+.|+++||+++++. 
T Consensus        80 GG~~------~s~~~~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p~~~~~~d~~~~~~d~~~~~~ll~eLr~~l~~~-  152 (333)
T 3n12_A           80 GGQN------GVVLLPDNAAKDRFINSIQSLIDKYGFDGIDIDLESGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHY-  152 (333)
T ss_dssp             ESTT------CCCCCCSHHHHHHHHHHHHHHHHHHCCSEEEEECCTTCCBCTTCCCTTSCCCHHHHHHHHHHHHHHHHH-
T ss_pred             cCCC------CccccCCHHHHHHHHHHHHHHHHHcCCCeEEEeccCCCCCCCCCcCCCcccHHHHHHHHHHHHHHHHhc-
Confidence            9986      357899999999999999999999999999999999842         235679999999999999853 


Q ss_pred             hcccccccceEEEEeecccCCCC----------Ccc--ChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCC
Q 008332          168 AKNSTRQQSLLILTARFRYSPPA----------NSY--LLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRF  235 (570)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~--~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~  235 (570)
                             +..+.++++++.....          ..|  ++.++.+++||||||+||+|+.+.  .+++.   +...    
T Consensus       153 -------g~~~~lT~Ap~~~~~~~~~~~y~~~~~~y~~d~~~i~~~lD~invMtYD~hg~~g--~~g~~---~~~~----  216 (333)
T 3n12_A          153 -------GPDFLLSMAPETAYVQGGYSAYGSIWGAYLPIIYGVKDKLTYIHVQHYNAGSGIG--MDGNN---YNQG----  216 (333)
T ss_dssp             -------CTTCEEEECCBGGGTGGGGTCCBBTBTTTHHHHHHTTTTCCEEEEECSSCCEEEC--TTSCE---EETT----
T ss_pred             -------CCCEEEEEccCcccccccccccccccchhHHHHHHHhcccCEEEeeeecCCCcCC--CCCcc---cccC----
Confidence                   2334555554332111          345  889999999999999999998652  23332   2110    


Q ss_pred             ccCHHHHHHHHHHcC-------------CCCCceeeeccccc
Q 008332          236 ARSTDQVLKAWIERG-------------LSADKLVMCLPFYG  264 (570)
Q Consensus       236 ~~~v~~~v~~~~~~g-------------vp~~KlvlGip~yG  264 (570)
                      ......++..++..|             +|++||+||+|...
T Consensus       217 ~~~~~~a~~~~l~~g~~~~g~~~~~~~~ip~~KlvlGlPa~~  258 (333)
T 3n12_A          217 TADYEVAMADMLLHGFPVGGNANNIFPALRSDQVMIGLPAAP  258 (333)
T ss_dssp             SHHHHHHHHHHHHHEEEETTEEEEEEECCCGGGEEEEEESSG
T ss_pred             cchHHHHHHHHHHhcccccCcccccccccCHHHeeeccccCC
Confidence            011122333344443             99999999999543

>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus}

Probab=100.00  E-value=1.5e-36  Score=296.63  Aligned_cols=203  Identities=13%  Similarity=0.157  Sum_probs=149.6

Q ss_pred             CCCeEEEEEecCCCC----C---cCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccH----HHHHHHHHHHHhhCCCce
Q 008332           23 AKPWIRVGYLNLSEV----S---TISGINYDLFTHLICSSADINSTTYQLSLSLPSDE----NQIAKFADTVKKKNPSIT   91 (570)
Q Consensus        23 ~~~~~vvgY~~~~~~----~---~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~lk~~~~~~k   91 (570)
                      .+.+++||||++|..    +   .+++++.++||||+|+|+.++++++++.+.+..+.    ..+.+.++.+|++  ++|
T Consensus        10 ~~~~~vv~Y~~~~~~~~g~~~~~~~~~i~~~~~Thii~af~~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~~k~~--g~k   87 (290)
T 2y8v_A           10 PEHRRVICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPGHITLNDDPPDHEMYNPLWAEVPVLKRS--GVK   87 (290)
T ss_dssp             CCCSEEEEEECCCSGGGCSCCCCTHHHHTTCCCCEEEEEEEEECSSTTCEEETTBCTTSGGGHHHHHHHHHHHHT--TCE
T ss_pred             CCCCeEEEEECCEeCCCCceeecChhhcCCccCcEEEEEEEEecCCCCceeecCCCcccchHHHHHHHHHHHHHC--CCE
Confidence            467899999999952    3   45578899999999999999987557777753321    2344455667776  599


Q ss_pred             EEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhccc
Q 008332           92 TILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNS  171 (570)
Q Consensus        92 vllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~  171 (570)
                      |++|||||.. +  .|+.+++++++|++|++++++++++|+|||||||||+|.   ++.+|+.|+++||+++.+      
T Consensus        88 vllSiGG~~~-~--~fs~~~~~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~p~---~~~~~~~ll~~Lr~~~~~------  155 (290)
T 2y8v_A           88 VMGMLGGAAQ-G--SYRCLDGDQEKFERYYQPLLAMVRRHQLDGLDLDVEEEM---SLPGIIRLIDRLKLDLGD------  155 (290)
T ss_dssp             EEEEEECSST-T--TTGGGSSCHHHHHHHHHHHHHHHHHHTCSEEEEECCSCB---CHHHHHHHHHHHHHHHCT------
T ss_pred             EEEEECCCCC-C--CchhccCCHHHHHHHHHHHHHHHHHhCCCeEEEcccccc---hHHHHHHHHHHHHHHhCC------
Confidence            9999999853 2  399999999999999999999999999999999999984   478999999999998852      


Q ss_pred             ccccceEEEEeecccC-----CCCCccChHHHhh----hhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHH
Q 008332          172 TRQQSLLILTARFRYS-----PPANSYLLNSIQR----NLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQV  242 (570)
Q Consensus       172 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~----~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~  242 (570)
                         .  +.+++++...     .....||+..+.+    .+|++++|.||.++..                     .....
T Consensus       156 ---~--~~lt~A~~~~~~~d~~~~~~yD~~~~~~~~~~~~d~~~~~~Y~~~~~~---------------------~~~~~  209 (290)
T 2y8v_A          156 ---D--FIITLAPVAAALLGIGNLSGFDYRQLEQQRGSKISWYNAQFYNGWGLA---------------------EDPRM  209 (290)
T ss_dssp             ---T--SEEEECCBGGGGGTSCCSSBSCHHHHHHHHGGGCCEEEEECCTTSCCT---------------------TCTHH
T ss_pred             ---C--EEEEeccccccccCccccccccHHHHHhhcccccceeeecccCCCCCC---------------------CCchH
Confidence               2  3344443322     1123455544433    3566666666543211                     01235


Q ss_pred             HHHHHHcCCCCCceeeecccccc
Q 008332          243 LKAWIERGLSADKLVMCLPFYGY  265 (570)
Q Consensus       243 v~~~~~~gvp~~KlvlGip~yG~  265 (570)
                      ++.|++.|+|++||+||+|+|..
T Consensus       210 ~~~~~~~g~p~~KivlGlp~~~~  232 (290)
T 2y8v_A          210 YAAIVAQGWSPQRVVYGLLTNPG  232 (290)
T ss_dssp             HHHHHHTTCCGGGEEEEEESSGG
T ss_pred             HHHHHHcCCCHHHEEEeccCCCC
Confidence            78899999999999999999854

>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens}

Probab=100.00  E-value=4.2e-36  Score=300.03  Aligned_cols=226  Identities=12%  Similarity=0.149  Sum_probs=154.7

Q ss_pred             CCCCCCCeEEEEEecCCCC-------------CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHh
Q 008332           19 HPAKAKPWIRVGYLNLSEV-------------STISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKK   85 (570)
Q Consensus        19 ~~~~~~~~~vvgY~~~~~~-------------~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~   85 (570)
                      .+....++++||||++|..             .++++|+ ..||||+|+|+.++.+. .+... ...+..+.+.++.+|+
T Consensus        18 ~p~~~~~~~~vgY~~~w~~~~~~~~~~~~~~~~~l~~i~-~~~~~i~~aF~~~~~~~-~~~~~-~~~~~~~~~~i~~~~~   94 (328)
T 4axn_A           18 MPSIANKKILMGFWHNWAAGASDGYQQGQFANMNLTDIP-TEYNVVAVAFMKGQGIP-TFKPY-NLSDTEFRRQVGVLNS   94 (328)
T ss_dssp             CCCCTTSCEEEEEEESSCCCSSCSTTSCBCCCCCGGGSC-TTCCEEEEEEEBCSSSC-BCCCS-SSCHHHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEEeCcccccCCCCccCCcCCCCchhhCC-CCCCEEEEEEEccCCCc-eeccC-CCCHHHHHHHHHHHHH
Confidence            3444567889999999952             3445555 46999999999887654 33322 2345567777777776


Q ss_pred             hCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC--CCCccchhhhHHHHHHHH
Q 008332           86 KNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT--STDMFNIGLLFDEWRIAA  163 (570)
Q Consensus        86 ~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~--~~~~~~~~~l~~~lr~~l  163 (570)
                      +  ++||+||||||+.       .+..+++.|++|++++++++++|+|||||||||+|..  .++..++..++++|++.+
T Consensus        95 ~--g~kvllSiGG~~~-------~~~~~~~~r~~F~~s~~~~l~~ygfDGiDiDwE~p~~~~~~~~~~~~~~l~~l~~~~  165 (328)
T 4axn_A           95 Q--GRAVLISLGGADA-------HIELKTGDEDKLKDEIIRLVEVYGFDGLDIDLEQAAIGAANNKTVLPAALKKVKDHY  165 (328)
T ss_dssp             T--TCEEEEEEEETTC-------CCCCCTTCHHHHHHHHHHHHHHHCCCEEEEEECTTTTTSTTHHHHHHHHHHHHHHHH
T ss_pred             C--CCEEEEEeCCCCC-------CccCChHHHHHHHHHHHHHHHHhCCCeEEEecccCCCCCcchHHHHHHHHHHHHHHH
Confidence            6  6999999999864       2345678899999999999999999999999999953  234456777778887777


Q ss_pred             hhhhhcccccccceEEEEeecccC--CCCCcc--ChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCH
Q 008332          164 TKLDAKNSTRQQSLLILTARFRYS--PPANSY--LLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST  239 (570)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v  239 (570)
                      .+.        +..+.+++++...  .....|  ++..+.+++||||+|+||+++.|.. .++++++++...........
T Consensus       166 ~~~--------g~~~~lt~Ap~~~~~~~~~~y~~~~~~~~~~~D~invm~Yd~~g~~~~-~~~~~~~~~~~~~~~~~~~~  236 (328)
T 4axn_A          166 AAQ--------GKNFIISMAPEFPYLRTNGTYLDYINALEGYYDFIAPQYYNQGGDGIW-VDELNAWITQNNDAMKEDFL  236 (328)
T ss_dssp             HTT--------TCCCEEEECCBGGGGBTTCTTHHHHHHTTTTCCEECCBCSSCTTCEEE-ETTTTEEEETTCSTTHHHHH
T ss_pred             Hhc--------CCceEEEEcccccccCCCcchhhHHHHhhccccEEeeecccCCCcccC-CCCcccccccCCcccchhHH
Confidence            532        3345555544332  222233  3677889999999999999998753 46777777654332111111


Q ss_pred             HHHHHHHH-----HcCCCCCceeeecccccc
Q 008332          240 DQVLKAWI-----ERGLSADKLVMCLPFYGY  265 (570)
Q Consensus       240 ~~~v~~~~-----~~gvp~~KlvlGip~yG~  265 (570)
                      ......+.     ..|+|++||+||+|.++.
T Consensus       237 ~~~~~~~~~~~~~~~g~p~~KivlGlPa~~~  267 (328)
T 4axn_A          237 YYLTESLVTGTRGYAKIPAAKFVIGLPSNND  267 (328)
T ss_dssp             HHHHHHHHHTCTTBCCCCGGGBEEEEESSTT
T ss_pred             HHHHHHHHHHHhhhcCCChhceEEeeccccC
Confidence            11112222     258999999999998764

>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor}

Probab=100.00  E-value=8.3e-35  Score=283.80  Aligned_cols=208  Identities=18%  Similarity=0.220  Sum_probs=152.0

Q ss_pred             CCCeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCC------ccHHHHHHHHHHHHhhCCCceE
Q 008332           23 AKPWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINSTTYQLSLSLP------SDENQIAKFADTVKKKNPSITT   92 (570)
Q Consensus        23 ~~~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~lk~~~~~~kv   92 (570)
                      ..++++||||.+|.    .+++++|| ++||||+|+|+.++++.+.+.+...      .+...+.+.++.++  ++++||
T Consensus         2 s~~~~vvgY~~~w~~~~~~~~~~~i~-~~~thi~~aFa~~~~~~G~i~~~~~~~~~~~~~~~~~~~~i~~~~--~~g~kv   78 (302)
T 3ebv_A            2 SLKHAVTGYWQNFNNGATVQKISDVP-SAYDIIAVAFADATTTPGAVTFNLDSAGLGGYTVDQFKADVRAKQ--AAGKKV   78 (302)
T ss_dssp             CCSSEEEEEEESSCSSSCCCCGGGSC-TTCSEEEEEEEEECSSTTCEECCCCTTTTTSCCHHHHHHHHHHHH--HTTCEE
T ss_pred             CCCceEEEEEccccCCCCCCCHHHcC-CCCCEEEEEEEEEECCCCeEEEeeccccccccCHHHHHHHHHHHH--cCCCEE
Confidence            35689999999996    46789999 8999999999999873235554321      12344555555443  468999


Q ss_pred             EEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccc
Q 008332           93 ILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNST  172 (570)
Q Consensus        93 llsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~  172 (570)
                      ++|||||..      +.++++++.|++|++++++++++|+|||||||||+|.   +..+|..|+++||+++.        
T Consensus        79 llsiGG~~~------s~~~~~~~~r~~f~~~~~~~~~~~~~DGiDiD~E~p~---~~~~~~~~l~~l~~~~g--------  141 (302)
T 3ebv_A           79 IISVGGEKG------TVSVNSSASATNFANSVYSVMREYGFDGVDIDLENGL---NPTYMTQALRALSAKAG--------  141 (302)
T ss_dssp             EEEEEETTC------CCCCCSHHHHHHHHHHHHHHHHHHTCCEEEEEECSCC---CHHHHHHHHHHHHHHHC--------
T ss_pred             EEEEECCCC------CcccCCHHHHHHHHHHHHHHHHHhCCCeEEEeccccc---CHHHHHHHHHHHHHhcC--------
Confidence            999999863      3458899999999999999999999999999999984   45689999999998773        


Q ss_pred             cccceEEEEeecccCC---CCCccChHH--HhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHH---
Q 008332          173 RQQSLLILTARFRYSP---PANSYLLNS--IQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLK---  244 (570)
Q Consensus       173 ~~~~~~~~~~~~~~~~---~~~~~~~~~--l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~---  244 (570)
                         ..+.+++++....   ....|....  +.+++||+++|+||. |+|    +++.++++...      +.+..+.   
T Consensus       142 ---~~~~lt~Ap~~~~~~~~~~~y~~~~~~~~~~lD~vnvq~Yd~-g~~----~~c~~~~y~~~------~~~~~~~~a~  207 (302)
T 3ebv_A          142 ---PDMILTMAPQTIDMQSTQGGYFQTALNVKDILTVVNMQYYNS-GTM----LGCDGKVYAQG------TVDFLTALAC  207 (302)
T ss_dssp             ---TTCEEEECCBGGGSSSTTSHHHHHHHHTGGGCCEEEEECSSC-CCE----ECTTSCEECTT------SHHHHHHHHH
T ss_pred             ---CCEEEEEeeccccccccchhHHHHHHHhcCcceEEEeecccC-CCc----CCCCccccCCC------CccHHHHHHH
Confidence               2344555444321   123344333  357999999999997 554    67777777432      2332222   


Q ss_pred             HHHHcCCCCCceeeeccccc
Q 008332          245 AWIERGLSADKLVMCLPFYG  264 (570)
Q Consensus       245 ~~~~~gvp~~KlvlGip~yG  264 (570)
                      .++..|+|++||+||+|.|.
T Consensus       208 ~~~~~gvp~~KIvlGlPa~~  227 (302)
T 3ebv_A          208 IQLEGGLAPSQVGLGLPAST  227 (302)
T ss_dssp             HHHTTTCCGGGEEEEEESST
T ss_pred             HHHhcCCCHHHEEEecccCC
Confidence            34567999999999999875

>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp}

Probab=100.00  E-value=1.1e-34  Score=286.63  Aligned_cols=217  Identities=12%  Similarity=0.159  Sum_probs=151.0

Q ss_pred             CCCeEEEEEecCCCC-------------CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCC-ccHHHHHHHHHHHHhhCC
Q 008332           23 AKPWIRVGYLNLSEV-------------STISGINYDLFTHLICSSADINSTTYQLSLSLP-SDENQIAKFADTVKKKNP   88 (570)
Q Consensus        23 ~~~~~vvgY~~~~~~-------------~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lk~~~~   88 (570)
                      ++++++||||++|+.             +++++||.. +|||+|+|+.++++++.+.+.+. ..+..+.+.++.+|++  
T Consensus         2 ~~~~~~vgYy~~w~~~~~~gyr~g~~~~~~~~~i~~~-~thv~~aFa~i~~~~g~~~~~~~~~~~~~~~~~i~~~k~~--   78 (321)
T 3ian_A            2 SLDKVLVGYWHNWKSTGKDGYKGGSSADFNLSSTQEG-YNVINVSFMKTPEGQTLPTFKPYNKTDTEFRAEISKLNAE--   78 (321)
T ss_dssp             -CCBEEEEEEESSCCCSSCSTTSCBCCCCCGGGCCTT-CSEEEEEEEBCCTTCCSCBCCCSSSCHHHHHHHHHHHHHT--
T ss_pred             CCCcEEEEEECcccccccccccCCccCccCHHHCCCC-CCEEEEEEEEecCCCCeEEecCCcccchhHHHHHHHHHHC--
Confidence            357899999999965             578899988 78999999999854434444321 2344455566778877  


Q ss_pred             CceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC--CCCccchhhhHHHHHHHHhhh
Q 008332           89 SITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT--STDMFNIGLLFDEWRIAATKL  166 (570)
Q Consensus        89 ~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~--~~~~~~~~~l~~~lr~~l~~~  166 (570)
                      ++||++|||||..+    +   ..+++.|++||+++++++++|+|||||||||+|..  .++..+|..|+++||+++++.
T Consensus        79 g~kvllsiGG~~~~----~---~~~~~~r~~f~~~~~~~~~~~g~DGiDiD~E~p~~~~~~~~~~~~~~l~~lr~~~~~~  151 (321)
T 3ian_A           79 GKSVLIALGGADAH----I---ELKKSQESDFVNEIIRLVDTYGFDGLDIDLEQAAIEAADNQTVIPSALKKVKDHYRKD  151 (321)
T ss_dssp             TCEEEEEEEETTCC----C---CCCGGGHHHHHHHHHHHHHHHCCCEEEEEECHHHHTSTTHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEeccCCCC----c---ccChHHHHHHHHHHHHHHHHhCCCeEEEecccCCcccccCHHHHHHHHHHHHHHHhhc
Confidence            59999999998642    1   23567899999999999999999999999999853  356778999999999988632


Q ss_pred             hhcccccccceEEEEeecccCC--CCCccC--hHHHhhhhceeeeecccCCCC--CCCCCCCCCCCCCCCCCCC--CccC
Q 008332          167 DAKNSTRQQSLLILTARFRYSP--PANSYL--LNSIQRNLNWIHAVTASYYEP--VSTNFTAPPAALYGSISGR--FARS  238 (570)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~l~~~vD~i~vm~yd~~~~--~~~~~~~~~a~l~~~~~~~--~~~~  238 (570)
                              +..+.+++++....  ....|+  +.++.+++|||+||+||+++.  |...    ..++.......  ..+.
T Consensus       152 --------g~~~~LT~Ap~~~~~~~~~~y~~~i~~l~~~~D~invm~YD~~~~g~~~~~----~~~~~~~~~~~~~~~f~  219 (321)
T 3ian_A          152 --------GKNFMITMAPEFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSD----LNMWISQSNDEKKEDFL  219 (321)
T ss_dssp             --------TCCCEEEECCBGGGCBTTSTTHHHHHHTTTTCCEECCBCSSCTTCEEEETT----TTEEEETTCSTTHHHHH
T ss_pred             --------cCCEEEEEcccCccccccchHHHHHHHHhCCEeEEEEccCCCCCCCCcccc----cchhhccCCCccccchh
Confidence                    23455555543322  234566  788899999999999999642  2211    11222111110  0112


Q ss_pred             HHHHHHHHHHc-----CCCCCceeeeccc
Q 008332          239 TDQVLKAWIER-----GLSADKLVMCLPF  262 (570)
Q Consensus       239 v~~~v~~~~~~-----gvp~~KlvlGip~  262 (570)
                      . .....+++.     |+|++||+||||.
T Consensus       220 ~-~~~~~~l~~~~~~~~iP~~KlvlGlPa  247 (321)
T 3ian_A          220 Y-GLTQRLVTGTDGFIKIPASKFVIGLPS  247 (321)
T ss_dssp             H-HHHHHHHHTCTTBCCCCGGGBEEEEES
T ss_pred             H-HHHHHHHhccccccCCChHHEEEeccc
Confidence            2 223345554     8999999999995

>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina}

Probab=100.00  E-value=7.7e-32  Score=260.95  Aligned_cols=200  Identities=14%  Similarity=0.137  Sum_probs=143.7

Q ss_pred             eEEEEEecCCCC--------CcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCc-cHH---HHHHHHHHHHhhCCCceEE
Q 008332           26 WIRVGYLNLSEV--------STISGINYDLFTHLICSSADINSTTYQLSLSLPS-DEN---QIAKFADTVKKKNPSITTI   93 (570)
Q Consensus        26 ~~vvgY~~~~~~--------~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~lk~~~~~~kvl   93 (570)
                      +|+||||+.|..        .++..+|...||||+|+|+.+++++ .+.+.+.. ++.   .+.+-++.+  +++++||+
T Consensus         3 pR~i~Yy~t~~~~~~~~~~~~p~~~~p~~~~THi~~af~~~~~~g-~i~~~d~~p~~~~~~~l~~~i~~~--q~~g~Kvl   79 (283)
T 4ac1_X            3 PRLIVYFQTTHDSSNRPISMLPLITEKGIALTHLIVCSFHINQGG-VVHLNDFPPDDPHFYTLWNETITM--KQAGVKVM   79 (283)
T ss_dssp             SEEEEEECCCBCTTSCBCCSTHHHHSSSCCCCEEEEEEEECCTTS-CCEETTBCTTSGGGHHHHHHHHHH--HHTTCEEE
T ss_pred             CeEEEEEeccccCCCCccccCCcccCCCCCccEEEEEEEEECCCC-eEEECCCCccchHHHHHHHHHHHH--HcCCCEEE
Confidence            689999999842        2344567778999999999999987 56555322 122   222223334  45589999


Q ss_pred             EEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhccccc
Q 008332           94 LSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTR  173 (570)
Q Consensus        94 lsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~  173 (570)
                      +|||||+.+....++...+++++|++|++++++++++|+|||||||||+|.   +..++..|+++||..+.+        
T Consensus        80 lsiGG~~~g~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~dG~D~d~e~~~---~~~~~~~li~~Lr~~~g~--------  148 (283)
T 4ac1_X           80 GMVGGAAPGSFNTQTLDSPDSATFEHYYGQLRDAIVNFQLEGMDLDVEQPM---SQQGIDRLIARLRADFGP--------  148 (283)
T ss_dssp             EEEETTSSCSSSTTTTTCSSHHHHHHHHHHHHHHHHHTTCSEEEEECCSCB---CHHHHHHHHHHHHHHHCT--------
T ss_pred             EEEcCCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCceEeecccCC---CHHHHHHHHHHHHHHcCC--------
Confidence            999999764545567777889999999999999999999999999999984   457899999999988852        


Q ss_pred             ccceEEEEeecccC---CCCCccChH----HHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHH
Q 008332          174 QQSLLILTARFRYS---PPANSYLLN----SIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAW  246 (570)
Q Consensus       174 ~~~~~~~~~~~~~~---~~~~~~~~~----~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~  246 (570)
                       ...+++++..+..   ....+.+..    ....++||+|+|.||..+.+..                     ..+.+.+
T Consensus       149 -~~~lT~Ap~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vnvQfYn~~~~~~~---------------------~~~~~~~  206 (283)
T 4ac1_X          149 -DFLITLAPVASALEDSSNLSGFSYTALQQTQGNDIDWYNTQFYSGFGSMAD---------------------TSDYDRI  206 (283)
T ss_dssp             -TSEEEECCBGGGGTTSCCSSBSCHHHHHHHHGGGCCEEEEECCTTSCCSSS---------------------SHHHHHH
T ss_pred             -CceEEEccccccccccccccchhHHHHHHhhcccccEEEecCCCCCCCcCC---------------------HHHHHHH
Confidence             2333332222211   112333433    3457899999999997654321                     1346678


Q ss_pred             HHcCCCCCceeeecc
Q 008332          247 IERGLSADKLVMCLP  261 (570)
Q Consensus       247 ~~~gvp~~KlvlGip  261 (570)
                      +..|+|++||+||+|
T Consensus       207 ~~~g~p~~KivlGlp  221 (283)
T 4ac1_X          207 VANGFAPAKVVAGQL  221 (283)
T ss_dssp             HHTTCCGGGEEEEEE
T ss_pred             HHhCCCcccEEEEee
Confidence            889999999999999

>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A*

Probab=99.97  E-value=1.5e-30  Score=249.69  Aligned_cols=199  Identities=14%  Similarity=0.148  Sum_probs=136.8

Q ss_pred             EEEEec-CCCCCcCC-CCCCCCcceEEEEeEEEeCCce--EEeeCCCcc-----HHHHHHHHHHHHhhCCCceEEEEEcC
Q 008332           28 RVGYLN-LSEVSTIS-GINYDLFTHLICSSADINSTTY--QLSLSLPSD-----ENQIAKFADTVKKKNPSITTILSIGQ   98 (570)
Q Consensus        28 vvgY~~-~~~~~~~~-~i~~~~~Thii~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~lk~~~~~~kvllsigg   98 (570)
                      ++.||- ++..-++. ..+...||||+|+|+.++.++.  .+.+....+     ...+.+.++.+  +++++||++||||
T Consensus         3 iavYWg~n~~~~~L~~~c~~~~~t~i~~AF~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~--q~~g~KVllSiGG   80 (273)
T 2hvm_A            3 IAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSC--QIQGIKVMLSLGG   80 (273)
T ss_dssp             EEEEESSCGGGCCHHHHHHTSCCSEEEEEEEEECSTTCCCEECCGGGCCCGGGTTTTHHHHHHHH--HHTTCEEEEEEEC
T ss_pred             EEEEcCCCCCCCchHhhcCCCCCCEEEEEEEEEeCCCceeeeeecCCCCcccccHHHHHHHHHHH--HcCCCEEEEEeCC
Confidence            678884 33221221 2235679999999999987652  222221111     12334444434  4578999999999


Q ss_pred             CCCCCcccccccccChHHHHHHHHHH----------HHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhh
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSS----------IRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDA  168 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~si----------v~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~  168 (570)
                      |..  +  |+  +++++.|++|++++          ++++++|+|||||||||+|.    ..+|..|+++||+.+.+   
T Consensus        81 ~~g--~--~~--~~s~~~~~~fa~~~~~~f~~g~s~~~~~~~~~~DGiDiDwE~p~----~~~~~~l~~~Lr~~~~~---  147 (273)
T 2hvm_A           81 GIG--S--YT--LASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGS----TLYWDDLARYLSAYSKQ---  147 (273)
T ss_dssp             SSC--C--CC--CCSHHHHHHHHHHHHHHTSSSCCSCCTTCSCCCSEEEEECCSSC----CSSHHHHHHHHHHGGGG---
T ss_pred             CCC--c--cC--CCCHHHHHHHHHHHHHHhcCCchhhhHHHHcCCceEEeeccCCC----chhHHHHHHHHHHHHhc---
Confidence            863  2  55  67889999999998          78899999999999999995    47899999999986641   


Q ss_pred             cccccccceEEEEeecccCCCCCccChHHH-hhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHH
Q 008332          169 KNSTRQQSLLILTARFRYSPPANSYLLNSI-QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWI  247 (570)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~  247 (570)
                            ...+.+++++... ....|....+ ..++||||||+||+++..   ..    +  +  .   ..++..+++.|+
T Consensus       148 ------g~~~~LT~A~~~~-~~~~~~~~~l~~~~~D~invm~Yd~~~~~---~~----~--~--~---~~~~~~~~~~w~  206 (273)
T 2hvm_A          148 ------GKKVYLTAAPQCP-FPDRYLGTALNTGLFDYVWVQFYNNPPCQ---YS----S--G--N---INNIINSWNRWT  206 (273)
T ss_dssp             ------SSCCEEEECCBSS-SSCTTTHHHHHTTCCSEEEEECSSCGGGS---CB----T--T--B---CHHHHHHHHHHH
T ss_pred             ------CCCeEEEECCCCC-CcchhHHHHHhcccCCEEEEeccCCCCCc---CC----C--C--C---HHHHHHHHHHHH
Confidence                  2335555555432 2234555556 479999999999997521   10    0  0  0   114677888888


Q ss_pred             HcCCCCCceeeecccc
Q 008332          248 ERGLSADKLVMCLPFY  263 (570)
Q Consensus       248 ~~gvp~~KlvlGip~y  263 (570)
                      + |+|++||+||+|++
T Consensus       207 ~-g~p~~KlvlGlp~~  221 (273)
T 2hvm_A          207 T-SINAGKIFLGLPAA  221 (273)
T ss_dssp             H-HCCCSEEEEEEESS
T ss_pred             h-cCCcccEEEEEecC
Confidence            7 89999999999986

>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A

Probab=99.97  E-value=6e-30  Score=246.38  Aligned_cols=178  Identities=15%  Similarity=0.167  Sum_probs=127.2

Q ss_pred             CCCCeEEEEEecCCC-------CCcCC-CCCCCCcceEEEEeEEEeCCc--eEEeeCCCccH-HHHHHHHHHHH-hhCCC
Q 008332           22 KAKPWIRVGYLNLSE-------VSTIS-GINYDLFTHLICSSADINSTT--YQLSLSLPSDE-NQIAKFADTVK-KKNPS   89 (570)
Q Consensus        22 ~~~~~~vvgY~~~~~-------~~~~~-~i~~~~~Thii~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~lk-~~~~~   89 (570)
                      .....++||||+.|.       .+.++ +|+...||||+|+ +.++.++  .........+. .......+.++ .++|+
T Consensus         5 ~~~~~~~vcY~~~~~~~~~~~g~~~~~~di~~~~~thiiya-a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g   83 (271)
T 1edt_A            5 VKQGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFA-ANINYDTGTKTAYLHFNENVQRVLDNAVTQIRPLQQQG   83 (271)
T ss_dssp             -CCSCEEEEEEETTTSCGGGGGGEEETTTCSBSCSEEEEEE-EEEEEETTTTEEEEECCHHHHHHHHTHHHHTHHHHHTT
T ss_pred             CCCCCEEEEEEeccceeccCCceeeecccCCccccEEEEee-cccCCCccccceEEEeCcchhhhhhhHHHHHHHHhcCC
Confidence            345689999999543       45688 8999999999999 8888653  22322211111 11111112222 25679


Q ss_pred             ceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC------CCCccchhhhHHHHHHHH
Q 008332           90 ITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT------STDMFNIGLLFDEWRIAA  163 (570)
Q Consensus        90 ~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~------~~~~~~~~~l~~~lr~~l  163 (570)
                      +||++|||||..  +..|+.+. ++++|++||+++++++++|+|||||||||||+.      ..|+.+|+.|+++||++|
T Consensus        84 ~KvllsiGG~~~--~~~~~~l~-s~~~r~~f~~s~~~~~~~~~fDGiDiDwE~p~~~~~g~~~~d~~~~~~ll~eLr~~l  160 (271)
T 1edt_A           84 IKVLLSVLGNHQ--GAGFANFP-SQQAASAFAKQLSDAVAKYGLDGVDFDDEYAEYGNNGTAQPNDSSFVHLVTALRANM  160 (271)
T ss_dssp             CEEEEEEEECTT--SCCTTCCS-SHHHHHHHHHHHHHHHHHHTCCEEEEECSSCCTTGGGCCCCCSSHHHHHHHHHHHHC
T ss_pred             CEEEEEECCCCC--CCCceecC-CHHHHHHHHHHHHHHHHHhCCCeEEEecccCCCCCCCCCCCCHHHHHHHHHHHHHHC
Confidence            999999999874  34577765 899999999999999999999999999999952      236889999999999988


Q ss_pred             hhhhhcccccccceEEEEeeccc-CCCCCccChHHHhhhhceeeeecccCCCCCCC
Q 008332          164 TKLDAKNSTRQQSLLILTARFRY-SPPANSYLLNSIQRNLNWIHAVTASYYEPVST  218 (570)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~  218 (570)
                      .          .  +.++++++. ......|++.++.+++||+   +||++++|..
T Consensus       161 ~----------~--~~Ls~a~~~~~~~~~~yd~~~~~~~lD~i---~~d~yg~w~~  201 (271)
T 1edt_A          161 P----------D--KIISLYNIGPAASRLSYGGVDVSDKFDYA---WNPYYGTWQV  201 (271)
T ss_dssp             T----------T--SEEEEESCHHHHTCCEETTEECGGGCSEE---ECCSTTEECC
T ss_pred             C----------C--CEEEEEecCCcchhccCCHHHHHhhCCEE---EEcccCCCCC
Confidence            4          3  334444332 1223578899999999998   6888877753

>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A*

Probab=99.97  E-value=2.8e-29  Score=243.56  Aligned_cols=201  Identities=15%  Similarity=0.130  Sum_probs=139.8

Q ss_pred             CCCeEEEEEecCC---CCCcCCCC-CCCCcceEEEEeEEEeCCceEEeeCCCc---------cHHHHHHHHHHHHhhCCC
Q 008332           23 AKPWIRVGYLNLS---EVSTISGI-NYDLFTHLICSSADINSTTYQLSLSLPS---------DENQIAKFADTVKKKNPS   89 (570)
Q Consensus        23 ~~~~~vvgY~~~~---~~~~~~~i-~~~~~Thii~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~lk~~~~~   89 (570)
                      .+...+++||..+   ...++.++ +.++||||+|+|+.+.+++ .+.+.+..         ....+.+.++.+|+  ++
T Consensus         3 ~~~~~v~~Ywgqn~~~~~~~L~~~c~~~~~t~v~~AF~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~--~g   79 (294)
T 2uy2_A            3 SANTNIAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQFPTL-GLNFANACSDTFSDGLLHCTQIAEDIETCQS--LG   79 (294)
T ss_dssp             -CCCEEEEEESSCTTSCCCCHHHHHTSSSCSEEEEEEEEEBTTT-EECCGGGCCCBCTTSCBCCHHHHHHHHHHHH--TT
T ss_pred             CCCCCEEEEcCCCCCCCCCCHHHhCCCCCCCEEEEeeEEecCCC-eEEecCcCCCCCCCcccchHHHHHHHHHHHH--CC
Confidence            3456899999853   34455555 4678999999999998765 56665310         12334444444544  48


Q ss_pred             ceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHH--------HHHcC---CCceeeeccCCCCCCCccchhhhHHH
Q 008332           90 ITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRI--------ARLYG---FRGLDFAWTAPNTSTDMFNIGLLFDE  158 (570)
Q Consensus        90 ~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~--------~~~~~---~DGidiDwE~p~~~~~~~~~~~l~~~  158 (570)
                      +||++|||||..  +..    +++++.|++|+++++++        ++.||   |||||||||+|.    ..+|..|+++
T Consensus        80 ~KVllSiGG~~g--~~~----~~s~~~~~~fa~s~~~~f~~~~~~~~r~~g~~~~DGiDiD~E~p~----~~~~~~L~~~  149 (294)
T 2uy2_A           80 KKVLLSLGGASG--SYL----FSDDSQAETFAQTLWDTFGEGTGASERPFDSAVVDGFDFDIENNN----EVGYSALATK  149 (294)
T ss_dssp             CEEEEEEECSCC--CBC----CSSHHHHHHHHHHHHHHHSSCCSCCCCTTTTCCCSEEEEECCSSC----CTTHHHHHHH
T ss_pred             CEEEEEeCCCCC--CCc----CCCHHHHHHHHHHHHHHhcccccccccccCcccccceEEecccCC----cccHHHHHHH
Confidence            999999999874  212    46889999999999987        57788   999999999994    5799999999


Q ss_pred             HHHHHhhhhhcccccccceEEEEeecccCCCCCccChHHH-hhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 008332          159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSI-QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR  237 (570)
Q Consensus       159 lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~  237 (570)
                      ||+.+++.        ...+.+++++........+. ..+ ..++||+|||+||+.   +. .   .+          ..
T Consensus       150 Lr~~~~~~--------g~~~~LTaAp~~~~~~~~~~-~~l~~~~~D~invq~Yd~~---~~-~---~~----------~~  203 (294)
T 2uy2_A          150 LRTLFAEG--------TKQYYLSAAPQCPYPDASVG-DLLENADIDFAFIQFYNNY---CS-V---SG----------QF  203 (294)
T ss_dssp             HHHHHTTS--------SSCCEEEECCBSSSSCTTTH-HHHHHSCCSEEEEECSSST---TS-T---TS----------SC
T ss_pred             HHHHHhhc--------CCceEEEECCCcccchhhhH-HHHhcCCcCeEEeecccCC---CC-C---CC----------Cc
Confidence            99998631        23455566554332222222 234 689999999999982   21 1   11          12


Q ss_pred             CHHHHHHHHHHc--CCCCCceeeecccc
Q 008332          238 STDQVLKAWIER--GLSADKLVMCLPFY  263 (570)
Q Consensus       238 ~v~~~v~~~~~~--gvp~~KlvlGip~y  263 (570)
                      +++ +...|+..  |+|++||+||+|++
T Consensus       204 ~~~-~~~~~~~~~~g~p~~KivlGlPa~  230 (294)
T 2uy2_A          204 NWD-TWLTYAQTVSPNKNIKLFLGLPGS  230 (294)
T ss_dssp             CHH-HHHHHHHHTCSSTTCEEEEEEESS
T ss_pred             CHH-HHHHHHHhcCCCCchhEEEeccCC
Confidence            455 46677765  79999999999985

>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala}

Probab=99.96  E-value=6.4e-30  Score=245.02  Aligned_cols=198  Identities=16%  Similarity=0.139  Sum_probs=135.5

Q ss_pred             EEEEEecCC-CCCcCC-CCCCCCcceEEEEeEEEeCCce--EEeeCCCcc-----HHHHHHHHHHHHhhCCCceEEEEEc
Q 008332           27 IRVGYLNLS-EVSTIS-GINYDLFTHLICSSADINSTTY--QLSLSLPSD-----ENQIAKFADTVKKKNPSITTILSIG   97 (570)
Q Consensus        27 ~vvgY~~~~-~~~~~~-~i~~~~~Thii~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~lk~~~~~~kvllsig   97 (570)
                      .+++||-.. ..-++. ..+.+.||||+|+|+.+..++.  .+.+....+     ...+...++.+  +++++||++|||
T Consensus         2 ~i~~YWg~n~~~~~L~~~c~~~~~t~i~~AF~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~l--q~~g~KVllSiG   79 (271)
T 2gsj_A            2 GIVVYWGQNGGEGTLTSTCESGLYQIVNIAFLSQFGGGRRPQINLAGHCDPANNGCRTVSDGIRAC--QRRGIKVMLSIG   79 (271)
T ss_dssp             EEEEEESSCTTSCCHHHHHHTSCCSEEEEEEEEEBSTTCCCEECCGGGCCTGGGTTTTHHHHHHHH--HTTTCEEEEEEE
T ss_pred             CEEEEeCCCCCCCChHHhccCCCCCEEEEEEEEecCCCCCcCccccccCCCccccHHHHHHHHHHH--HhCCCEEEEEeC
Confidence            378899642 222222 1235689999999999987653  233321111     12233444434  567999999999


Q ss_pred             CCCCCCcccccccccChHHHHHHHHHH----------HHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhh
Q 008332           98 QGKDTNYSIYSSMVRNSSHRKSFIDSS----------IRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLD  167 (570)
Q Consensus        98 g~~~~~~~~f~~~~~~~~~r~~fi~si----------v~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~  167 (570)
                      ||.+  +  |+  +++++.|++|++++          ++++++|+|||||||||||.     .+|..|+++||+.+.+  
T Consensus        80 G~~g--s--~~--~~s~~~~~~fa~s~~~~f~~~~s~~~~~~~~~~DGiDiDwE~p~-----~~~~~l~~~Lr~~~~~--  146 (271)
T 2gsj_A           80 GGAG--S--YS--LSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLDGVDFDIEHGG-----AYYDALARRLSEHNRG--  146 (271)
T ss_dssp             CSSS--C--BC--CCSHHHHHHHHHHHHHHHSSSCCTTCTTCSCCCSEEEEECCSCC-----TTHHHHHHHHHGGGGS--
T ss_pred             CCCC--c--ee--cCCHHHHHHHHHHHHHHhcCCcchhhhHHHcCCceEEEeecCch-----HHHHHHHHHHHHHhhc--
Confidence            9864  2  44  56789999999999          56789999999999999995     7899999999976641  


Q ss_pred             hcccccccceEEEEeecccCCCCCccChHHH-hhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHH
Q 008332          168 AKNSTRQQSLLILTARFRYSPPANSYLLNSI-QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAW  246 (570)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~  246 (570)
                             +..+.+++++... ....|....+ .+++||||+|+||+++.   .+.    +    ..   ..++..+++.|
T Consensus       147 -------g~~~~LTaAp~~~-~~~~~~~~~~~~~~~D~invm~Yd~~~~---~~~----~----~~---~~~~~~~~~~w  204 (271)
T 2gsj_A          147 -------GKKVFLSAAPQCP-FPDQSLNKALSTGLFDYVWVQFYNNPQC---EFN----S----GN---PSNFRNSWNKW  204 (271)
T ss_dssp             -------SSCCEEEECCBSS-SSCTTTHHHHHTSCCSEEEEECSSCTTT---SCC----T----TC---THHHHHHHHHH
T ss_pred             -------CCCeEEEEeccCC-cchhhHHHHHhhccCCeEEEEcccCCCc---cCC----C----Cc---hhHHHHHHHHH
Confidence                   2345566655442 2234555555 47999999999998642   000    0    00   12578889999


Q ss_pred             HHcCCCCCceeeecccc
Q 008332          247 IERGLSADKLVMCLPFY  263 (570)
Q Consensus       247 ~~~gvp~~KlvlGip~y  263 (570)
                      ++ |+|+ ||+||+|++
T Consensus       205 ~~-~~p~-Kl~lGlp~~  219 (271)
T 2gsj_A          205 TS-SFNA-KFYVGLPAS  219 (271)
T ss_dssp             HH-HCSS-EEEEEEESS
T ss_pred             Hh-cCCC-cEEEeccCC
Confidence            88 6999 999999985

>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A*

Probab=99.95  E-value=2.3e-28  Score=239.02  Aligned_cols=201  Identities=9%  Similarity=0.041  Sum_probs=130.6

Q ss_pred             CCCeEEEEEecCCC---CCcCCCCCCCCcceEEEEeEE-EeCCceEEeeCCCcc-H-------HHHHHHHHHHHhhCCCc
Q 008332           23 AKPWIRVGYLNLSE---VSTISGINYDLFTHLICSSAD-INSTTYQLSLSLPSD-E-------NQIAKFADTVKKKNPSI   90 (570)
Q Consensus        23 ~~~~~vvgY~~~~~---~~~~~~i~~~~~Thii~~~~~-~~~~~~~~~~~~~~~-~-------~~~~~~~~~lk~~~~~~   90 (570)
                      +++++++|||.+..   .+.++++|. .++||++ |+. +..++ ++.+.+..+ +       ..+.+.++.+  +++++
T Consensus         6 ~~~~~vv~Y~~~~~~~~~~~l~~i~~-~~~~i~~-F~~~~~~~g-~~~~~p~~~~~~~~~~~~~~~~~~i~~~--q~~g~   80 (290)
T 1eok_A            6 GSNGVCIAYYITDGRNPTFKLKDIPD-KVDMVIL-FGLKYWSLQ-DTTKLPGGTGMMGSFKSYKDLDTQIRSL--QSRGI   80 (290)
T ss_dssp             --CCEEEEEEECSCSSTTSCGGGCCT-TCCEEEE-ESSCHHHHH-CTTSSCTTSGGGTTCSSHHHHHHHHHHH--HTTTC
T ss_pred             CCCCEEEEEEecCCCCCcccHhHCCC-CCCEEEE-ccccCCCCC-cceeCCCCcccccccccHHHHHHHHHHH--HhCCC
Confidence            46689999998632   467888885 4566666 663 22222 333321111 1       2333444434  45689


Q ss_pred             eEEEEEcCCCCCCccccccc-ccChHHHHHHHHHHHH-HHHHcCCCceeeeccCCCCC---------------------C
Q 008332           91 TTILSIGQGKDTNYSIYSSM-VRNSSHRKSFIDSSIR-IARLYGFRGLDFAWTAPNTS---------------------T  147 (570)
Q Consensus        91 kvllsigg~~~~~~~~f~~~-~~~~~~r~~fi~siv~-~~~~~~~DGidiDwE~p~~~---------------------~  147 (570)
                      ||++||||     +..|+.. +++.+.|++|++++++ +|++|||||||||||||...                     +
T Consensus        81 KVllSIGG-----~~~~~~~~~~~~~~r~~fa~s~~~~~l~~yg~DGiDiDwEy~~~~~~~~~~~pg~~~~g~~~~~~~~  155 (290)
T 1eok_A           81 KVLQNIDD-----DVSWQSSKPGGFASAAAYGDAIKSIVIDKWKLDGISLDIEHSGAKPNPIPTFPGYAATGYNGWYSGS  155 (290)
T ss_dssp             EEEEEEEC-----CGGGGSSSGGGSSSHHHHHHHHHHHHTTTTCCCEEEEECCCCCCCCSSCCCCCCHHHHSCSSCCTTS
T ss_pred             EEEEEeCC-----CcCCCCccccchhHHHHHHHHHHHHHHHhcCCCcEEEecCCCCcccccccccccccccccccccCcc
Confidence            99999998     2346666 6666899999999999 99999999999999998541                     1


Q ss_pred             C--ccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCC
Q 008332          148 D--MFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPA  225 (570)
Q Consensus       148 ~--~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a  225 (570)
                      +  ..+|..|+++||+++...    .   +....++++..........++.++.+++||||||+||+++.          
T Consensus       156 ~~~~~~~~~~l~el~~~~~~~----a---~~~~~l~i~~~~~~y~~~~~~~~~~~~lD~invm~Yd~~~~----------  218 (290)
T 1eok_A          156 MAATPAFLNVISELTKYFGTT----A---PNNKQLQIASGIDVYAWNKIMENFRNNFNYIQLQSYGANVS----------  218 (290)
T ss_dssp             CCCCHHHHHHHHHHTTTSSTT----S---SSCCEEEEEECTTSTTHHHHHHHHTTTCSEEEECCTTCCHH----------
T ss_pred             hHHHHHHHHHHHHHHHHhCCC----C---CCceEEEecCCcccccchHHHHHHhhccCEEEEecCCCCCc----------
Confidence            2  468899999998766421    0   12223332222111111224678899999999999997541          


Q ss_pred             CCCCCCCCCCccCHHHHHHHHH--HcCCCCCceeeecccc
Q 008332          226 ALYGSISGRFARSTDQVLKAWI--ERGLSADKLVMCLPFY  263 (570)
Q Consensus       226 ~l~~~~~~~~~~~v~~~v~~~~--~~gvp~~KlvlGip~y  263 (570)
                                  .....++ |.  ..|+|++||+||+|.|
T Consensus       219 ------------~~~~~~~-~~~~~~g~p~~Ki~lG~Pa~  245 (290)
T 1eok_A          219 ------------RTQLMMN-YATGTNKIPASKMVFGAYAE  245 (290)
T ss_dssp             ------------HHHHHHH-HHHHTSCCCGGGEEEEECTT
T ss_pred             ------------HHHHHHH-HhhccCCCCHHHEEeccccC
Confidence                        2334444 42  1699999999999988

>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5

Probab=99.94  E-value=3.9e-27  Score=228.15  Aligned_cols=205  Identities=16%  Similarity=0.162  Sum_probs=137.5

Q ss_pred             eEEEEEecCCCCCcCCC-CCCCCcceEEEEeEEEeCCc---eEEeeCCCcc------HHHHHHHHHHHHhhCCCceEEEE
Q 008332           26 WIRVGYLNLSEVSTISG-INYDLFTHLICSSADINSTT---YQLSLSLPSD------ENQIAKFADTVKKKNPSITTILS   95 (570)
Q Consensus        26 ~~vvgY~~~~~~~~~~~-i~~~~~Thii~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~lk~~~~~~kvlls   95 (570)
                      ..+++||.+...-++.. -+...+|||+++|+.+..+|   ..+.+....+      ...+.+.++.+++  +++||++|
T Consensus         5 ~~i~~YWg~~~~g~L~~~c~~~~~~~V~~aF~~~~~~G~~~p~~~l~~~~~~~~~~~~~~~~~~Ik~~q~--~g~KVllS   82 (299)
T 1cnv_A            5 TEIAVYWGQREDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFLESQIKECQR--MGVKVFLA   82 (299)
T ss_dssp             CEEEEEECSGGGCCHHHHHHTCCCSEEEEEEECEECTTCSSCCCCBTTTBBTTTTBCGGGGHHHHHHHHH--TTCEEEEE
T ss_pred             CcEEEEcCCCCCCCcccccCCCCCCEEEEEEEEecCCCCcchhhhhcccCCcccCcchHhHHHHHHHHHh--CCCEEEEE
Confidence            35899998721111111 02356999999999887654   1233332211      1345555554544  48999999


Q ss_pred             EcCCCCCCcccccccccChHHHHHHHHHHH---------HHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhh
Q 008332           96 IGQGKDTNYSIYSSMVRNSSHRKSFIDSSI---------RIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL  166 (570)
Q Consensus        96 igg~~~~~~~~f~~~~~~~~~r~~fi~siv---------~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~  166 (570)
                      ||||..+    |+  +++++.|++|++++.         +++++|+|||||||||+|..   ..+|..|+++||+.+.+.
T Consensus        83 iGG~~gs----~~--~~s~~~~~~fa~~~~~~f~~g~~~~~~~~~~~DGiDiD~E~~~~---~~~~~~L~~~Lr~~~~~~  153 (299)
T 1cnv_A           83 LGGPKGT----YS--ACSADYAKDLAEYLHTYFLSERREGPLGKVALDGIHFDIQKPVD---ELNWDNLLEELYQIKDVY  153 (299)
T ss_dssp             EECSSSE----EC--CCSHHHHHHHHHHHHHHHBSSSSCBTTBSCBCSEEEEECSSCSC---STTHHHHHHHHHHHHHHH
T ss_pred             ecCCccc----cc--cCCHHHHHHHHHHHHHHhcCccccchHHhcCCceEEeeccCCCc---hhHHHHHHHHHHHhhhhc
Confidence            9998742    33  678999999999994         88999999999999999853   379999999999865421


Q ss_pred             hhcccccccceEEEEeecccCCCCCccChHHH-hhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHH
Q 008332          167 DAKNSTRQQSLLILTARFRYSPPANSYLLNSI-QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKA  245 (570)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~  245 (570)
                              ...+.+++++.... ...+....+ ..++||+|+|+||..+  +    +..+.   .     ..+...+++.
T Consensus       154 --------g~~~~LTaAp~~~~-~~~~~~~~~~~~~lD~invq~Yn~~~--c----~~~~g---~-----~~~~~~a~~~  210 (299)
T 1cnv_A          154 --------QSTFLLSAAPGCLS-PDEYLDNAIQTRHFDYIFVRFYNDRS--C----QYSTG---N-----IQRIRNAWLS  210 (299)
T ss_dssp             --------TCCCEEEECCBSSS-SCTTTHHHHTTTCCSEEEEECSSCTT--T----SCBTT---B-----CHHHHHHHHH
T ss_pred             --------CCCeEEEEeccCCC-cchhHHHHHhcCCcCEEEEEeecCCC--c----CCCCC---C-----hhhHHHHHHH
Confidence                    23455666554321 223333334 6899999999999742  1    10000   0     1146778999


Q ss_pred             HHHcCC-CCCceeeeccccc
Q 008332          246 WIERGL-SADKLVMCLPFYG  264 (570)
Q Consensus       246 ~~~~gv-p~~KlvlGip~yG  264 (570)
                      |++.+. |++||+||+|+..
T Consensus       211 w~~~~~~p~~Kl~lGlPa~~  230 (299)
T 1cnv_A          211 WTKSVYPRDKNLFLELPASQ  230 (299)
T ss_dssp             HHHHSSSCSSCEEEEEESSG
T ss_pred             HHHhCCCCcccEEEEecCCc
Confidence            998863 9999999999854

>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A*

Probab=99.94  E-value=3.8e-26  Score=222.97  Aligned_cols=208  Identities=13%  Similarity=0.074  Sum_probs=138.5

Q ss_pred             EEEEEecCC-CCCcCCCC-CCCCcceEEEEeEEEeCCce-----EEeeC-----------CC------ccHHHHHHHHHH
Q 008332           27 IRVGYLNLS-EVSTISGI-NYDLFTHLICSSADINSTTY-----QLSLS-----------LP------SDENQIAKFADT   82 (570)
Q Consensus        27 ~vvgY~~~~-~~~~~~~i-~~~~~Thii~~~~~~~~~~~-----~~~~~-----------~~------~~~~~~~~~~~~   82 (570)
                      -+++||-.. ...++.+. +...+++|+++|+....++.     .+.+.           +.      .....+.+.++.
T Consensus         3 ~i~vYWGq~~~~~~L~~~c~~~~ydii~laF~~~~~~~~~~~~P~~n~~~~c~~~~~~~~~g~~t~~l~~c~~l~~~I~~   82 (310)
T 2xtk_A            3 NLAIYWGQGPNQLRLSHFCQETSLDIINIGFINYFPDMSPGHWPGSNFGNQCDGSVYVTNDGVVTKLLSGCHQIMEDIPI   82 (310)
T ss_dssp             EEEEEESCCTTCCCHHHHHTCTTCSEEEEEEEEECTTTSGGGSCEECCTTCSCSCEEECTTCCEEEEESCCHHHHHHHHH
T ss_pred             CEEEEECCCCCCCChHHhcCCCCccEEEEeeeeccCCCCCCCCccceeccccCccccccCCCcccccccCcHhHHHHHHH
Confidence            367888763 23444444 23469999999998765421     22221           00      012456666666


Q ss_pred             HHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHH----------HHHHcC---CCceeeeccCCCCCCCc
Q 008332           83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIR----------IARLYG---FRGLDFAWTAPNTSTDM  149 (570)
Q Consensus        83 lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~----------~~~~~~---~DGidiDwE~p~~~~~~  149 (570)
                      +|++  ++|||+|||||..+ +  ++  +++++.|++|++++++          +++.||   |||||||||+|.    .
T Consensus        83 ~q~~--g~KVllSiGG~~~~-~--~~--~~s~~~r~~fa~s~~~~f~~~~~~~~~~r~~g~~~fDGiDiDwE~p~----~  151 (310)
T 2xtk_A           83 CQAA--GKKVLLSIGGAYPP-D--QS--ILSEDSAVAFATFLWGAFGPVAEGWEGPRPFGDVVVDGFDFDIEHNG----G  151 (310)
T ss_dssp             HHHT--TCEEEEEEEESSCS-C--CC--CCCHHHHHHHHHHHHHHHSSCCTTCCSCCTTTTCCCSEEEEEECSSC----C
T ss_pred             HHhC--CCEEEEEeCCCcCC-c--cc--cCCHHHHHHHHHHHHHHhcCcccccccccccCCcccceEEEeecCCC----c
Confidence            6554  89999999998752 2  22  4688999999999986          588899   999999999994    4


Q ss_pred             cchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCCCccChHHHh-hhhceeeeecccCCCCCCCCCCCCCCCCC
Q 008332          150 FNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQ-RNLNWIHAVTASYYEPVSTNFTAPPAALY  228 (570)
Q Consensus       150 ~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~vD~i~vm~yd~~~~~~~~~~~~~a~l~  228 (570)
                      .+|..|+++||+.+.+.       ....+.+++++... ....+....+. .++||||||+||+++-..   .     .+
T Consensus       152 ~~~~~L~~~Lr~~~~~~-------~~~~~~LTaAp~~~-~~~~~~~~~l~~~~lD~invq~Yd~~~~~~---~-----~~  215 (310)
T 2xtk_A          152 FGYATMVNTFRQYFNQV-------PERKFYLSAAPQCI-IPDAQLSDAIFNAAFDFIWIQYYNTAACSA---K-----SF  215 (310)
T ss_dssp             TTHHHHHHHHHHHHHTC-------TTSCCEEEECCBSS-SSCTTTHHHHHHSCCSEEEEECSSCTTTCT---H-----HH
T ss_pred             hhHHHHHHHHHHhhccc-------cCCCeEEEeCCcCC-CcchHHHHHHHhCCCCceeeeeccCCCCCc---c-----cc
Confidence            68999999999998631       12345566655433 22345667775 699999999999864110   0     00


Q ss_pred             CCCCCCCccCHHHHHHHHHHc-CCCCCceeeecccc
Q 008332          229 GSISGRFARSTDQVLKAWIER-GLSADKLVMCLPFY  263 (570)
Q Consensus       229 ~~~~~~~~~~v~~~v~~~~~~-gvp~~KlvlGip~y  263 (570)
                      ... .....+++..+ .|+.. ++|++||+||+|++
T Consensus       216 ~~~-~~~~~~~~~~~-~~~~~~~~p~~KlvlGlPa~  249 (310)
T 2xtk_A          216 IDT-SLGTFNFDAWV-TVLKASASKDAKLYVGLPAS  249 (310)
T ss_dssp             HST-TSCCCCHHHHH-HHHTTSTTTTCEEEEEEESS
T ss_pred             ccC-ccccccHHHHH-HHHHhcCCCchhEEEeecCC
Confidence            000 01123677654 56654 68999999999985

>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5

Probab=99.94  E-value=2.6e-25  Score=212.19  Aligned_cols=172  Identities=16%  Similarity=0.100  Sum_probs=122.5

Q ss_pred             CCCCeEEEEEecCCC-------CCcC-CCCCCCCcceEEEEeEEEeCC--ceEEeeCCCccH----HHHHHHHHHHHhhC
Q 008332           22 KAKPWIRVGYLNLSE-------VSTI-SGINYDLFTHLICSSADINST--TYQLSLSLPSDE----NQIAKFADTVKKKN   87 (570)
Q Consensus        22 ~~~~~~vvgY~~~~~-------~~~~-~~i~~~~~Thii~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~lk~~~   87 (570)
                      ....+++|||++.|.       .|.+ +++++. ||||+++|+.++.+  +..+.+....+.    ....+.++.+|  +
T Consensus         6 ~~~~~kvVcY~~~~~~~p~~~g~f~l~~~~~p~-~d~vi~~fa~in~d~~~g~~~l~~n~~~~~~~~~~~~~i~~lq--~   82 (289)
T 2ebn_A            6 TKANIKLFSFTEVNDTNPLNNLNFTLKNSGKPL-VDMVVLFSANINYDAANDKVFVSNNPNVQHLLTNRAKYLKPLQ--D   82 (289)
T ss_dssp             CCCSCEEEEEEETTTCCGGGGGGEEETTTCCBS-CCEEEEEEEEEEEETTTTEEEEECCHHHHHHHHTHHHHTHHHH--H
T ss_pred             cCCCCEEEEEEEecCCCCCcCceEEeccCCCCc-eeEEEEEEEecccCCCCCeeEEecCccccccccchHHHHHHHH--h
Confidence            445689999999773       3556 677774 99999999988743  235443322211    11234455565  4


Q ss_pred             CCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC---------CCCccchhhhHHH
Q 008332           88 PSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT---------STDMFNIGLLFDE  158 (570)
Q Consensus        88 ~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~---------~~~~~~~~~l~~~  158 (570)
                      +++||++|||||+.  ...|..+.  ++.|++||+++++++++|||||||||||||+.         ..++.+|+.|+++
T Consensus        83 ~glKVllSIGG~~~--~~g~~~l~--~~~r~~Fa~sv~~~v~~ygfDGiDiDwEyp~~~~~g~~g~~~~d~~n~~~Ll~e  158 (289)
T 2ebn_A           83 KGIKVILSILGNHD--RSGIANLS--TARAKAFAQELKNTCDLYNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYE  158 (289)
T ss_dssp             TTCEEEEEEECCSS--SCCTTCBC--HHHHHHHHHHHHHHHHHHTCCEEEEECCSCCCCSSCCTTBCCCCHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCC--CCCeecCC--HHHHHHHHHHHHHHHHHhCCCcEEEeeecCCCCccCCCCCCCccHHHHHHHHHH
Confidence            57999999998653  23465553  78999999999999999999999999999732         1267899999999


Q ss_pred             HHHHHhhhhhcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeeccc
Q 008332          159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTAS  211 (570)
Q Consensus       159 lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd  211 (570)
                      ||++|.          ...+++++..+.......|+..++.+++||+.. +|+
T Consensus       159 LR~~l~----------~klLT~Av~g~~~~~~~~~d~~~~~~ylDy~~~-~Yg  200 (289)
T 2ebn_A          159 TKQAMP----------NKLVTVYVYSRTSSFPTAVDGVNAGSYVDYAIH-DYG  200 (289)
T ss_dssp             HHHHCT----------TSEEEEEESGGGSCCCSCBTTBCGGGTCSEEEE-CTT
T ss_pred             HHHHCC----------CCEEEEEecCCccccccccCHHHHHhcCCEEEe-ccc
Confidence            999883          344444444333333567899999999999866 463

>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A*

Probab=99.90  E-value=1.4e-23  Score=200.37  Aligned_cols=203  Identities=14%  Similarity=0.077  Sum_probs=126.8

Q ss_pred             CeEEEEEecC-CCCCcCCCC-CCCCcceEEEEeEEEeC-Cc-eEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCC
Q 008332           25 PWIRVGYLNL-SEVSTISGI-NYDLFTHLICSSADINS-TT-YQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGK  100 (570)
Q Consensus        25 ~~~vvgY~~~-~~~~~~~~i-~~~~~Thii~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~  100 (570)
                      .-.+++||-. ...-++.+. +...+|||+++|+.+.+ +| ..+.+... ....+...++.++  ++++|||+|||||.
T Consensus         5 ~~~i~~YWGqn~~~~~L~~~c~~~~~~~V~~AF~~~~~~~G~~~~d~~g~-~~~~~~~~I~~cq--~~g~kVlLSiGG~~   81 (274)
T 1ta3_A            5 TGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH-DLSSVGADIKHCQ--SKGVPVSLSIGGYG   81 (274)
T ss_dssp             CCCEEEEESSCGGGCCHHHHHHTTCCSEEEEEEEEEBSSSSCCEECCTTC-CGGGHHHHHHHHH--HTTCCEEEEEEESS
T ss_pred             CCcEEEEeCCCCCCCchHhhcccCCCcEEEEccEeecCCCCceeeccCCC-ChHHHHHHHHHHH--hCCCEEEEecCCCc
Confidence            3467889954 322222222 14579999999999887 33 22333221 1233445555444  45899999999987


Q ss_pred             CCCcccccccccChHHHHHHHHHHHHHH------------HHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhh
Q 008332          101 DTNYSIYSSMVRNSSHRKSFIDSSIRIA------------RLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDA  168 (570)
Q Consensus       101 ~~~~~~f~~~~~~~~~r~~fi~siv~~~------------~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~  168 (570)
                      .+.+      +.+++.+++|++++.+..            .+++|||||||||+|.   +..+|..|+++||+.+.+.  
T Consensus        82 gs~~------l~s~~~a~~fa~~l~~~f~~g~~~~~~r~~g~~~lDGiDiD~E~~~---~~~~~~~L~~~Lr~~~~~~--  150 (274)
T 1ta3_A           82 TGYS------LPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGT---PADRYDVLALELAKHNIRG--  150 (274)
T ss_dssp             SCBC------CCSHHHHHHHHHHHHHHHSSCCCTTSCCTTTTCCCSEEEEEESSCC---TTCCHHHHHHHHHTTCCSS--
T ss_pred             Cccc------cCCHHHHHHHHHHHHHHhcCcccccccccHhhcCcCeEEEeccCCC---CchhHHHHHHHHHHHHhhc--
Confidence            4322      557788999999998764            4567999999999983   4679999999999765311  


Q ss_pred             cccccccceEEEEeecccCCCCCccChHHH-hhhhceeeeeccc-CCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHH
Q 008332          169 KNSTRQQSLLILTARFRYSPPANSYLLNSI-QRNLNWIHAVTAS-YYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAW  246 (570)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~vD~i~vm~yd-~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~  246 (570)
                        ..  ...+.|++++........+.-..+ ..++||++||.|| ..  .+.        ...        ....+++.|
T Consensus       151 --~~--g~~~~LTaAPq~p~~~d~~~~~~l~~~~~D~v~vqfYdnn~--~c~--------~~~--------~~~~~~~~w  208 (274)
T 1ta3_A          151 --GP--GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDK--WCN--------QNL--------GWEGSWDKW  208 (274)
T ss_dssp             --SS--SCCCEEEEEECSSSSCCHHHHHHHTTSCCCEEEEECSSCCT--TSB--------TTB--------BHHHHHHHH
T ss_pred             --cC--CCCEEEEECCcCCCCCChhHHHHHhcCCCCeEEeeeecCCC--CCc--------ccc--------ccHHHHHHH
Confidence              01  233455555422111122211222 4689999999994 21  111        000        123467778


Q ss_pred             HHcCCCCCceeeeccccc
Q 008332          247 IERGLSADKLVMCLPFYG  264 (570)
Q Consensus       247 ~~~gvp~~KlvlGip~yG  264 (570)
                      ++ ++|++||+||+|.+.
T Consensus       209 ~~-~~p~~Ki~lGlPa~~  225 (274)
T 1ta3_A          209 TA-AYPATRFYVGLTADD  225 (274)
T ss_dssp             HH-HCTTSEEEEEEECCT
T ss_pred             Hh-cCCcccEEEeeecCc
Confidence            76 599999999999754

>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron}

Probab=99.83  E-value=1.2e-19  Score=182.37  Aligned_cols=165  Identities=9%  Similarity=0.108  Sum_probs=118.6

Q ss_pred             CCeEEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCC--ceEEeeCCCcc-HHHH---HHHHHHHHhhCCCc
Q 008332           24 KPWIRVGYLNLSE-------VSTISGINYDLFTHLICSSADINST--TYQLSLSLPSD-ENQI---AKFADTVKKKNPSI   90 (570)
Q Consensus        24 ~~~~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~--~~~~~~~~~~~-~~~~---~~~~~~lk~~~~~~   90 (570)
                      ..+.+++|++--.       .|.++.- --.++|++++.+.++.+  +..+.+....+ ...+   .++++.++++  ++
T Consensus       166 ~~~~~~~y~evn~~npln~~~y~l~~~-~~~~d~v~lfaanin~d~~~~~~~l~~n~~~~~~L~~~~~~v~~lq~~--gl  242 (451)
T 3poh_A          166 GVMQGYLFFEVNDVNPLNTLSFQLENG-KLLWDVVVLFAANINYDAEAGRPRVQCNPNVQYLLDNNETLLQPLRRR--GV  242 (451)
T ss_dssp             TCCEEEEEEETTTCCGGGGGGCBBTTS-CBSCSEEEEEEEEEEEETTTTEEEEECCHHHHHHHHTHHHHTHHHHHT--TC
T ss_pred             CCceEEEEEEeCCCCccccceeEecCC-CceeeEEEEeeeecCCCcccCeEEEEcCCchHHhhhChHHHHHHHHHC--CC
Confidence            3478889997532       3444321 12589999999999943  34554443332 2223   5677767665  69


Q ss_pred             eEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCC---------CCccchhhhHHHHHH
Q 008332           91 TTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS---------TDMFNIGLLFDEWRI  161 (570)
Q Consensus        91 kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~---------~~~~~~~~l~~~lr~  161 (570)
                      ||++|||||+.  ...|+.+  +++.|++|++++++++++|||||||||||||+..         .+..+|+.|+++||+
T Consensus       243 KVllSIgGg~~--~~gf~~l--s~~~r~~Fa~~v~~~v~~yglDGIDiDwEYp~~~~~g~~~~~~~d~~nf~~Ll~eLR~  318 (451)
T 3poh_A          243 KVLLGLLGNHD--ITGLAQL--SEQGAKDFAREVAQYCKAYNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQ  318 (451)
T ss_dssp             EEEEEEECCSS--SCCTTCB--CHHHHHHHHHHHHHHHHHTTCCEEEEECCSCCCCCTTSTTBCSCCHHHHHHHHHHHHH
T ss_pred             EEEEEECcCCC--CCCcccC--CHHHHHHHHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCCcCCCCHHHHHHHHHHHHH
Confidence            99999987653  3447766  7899999999999999999999999999999532         467899999999999


Q ss_pred             HHhhhhhcccccccceEEEEeecccCCCCCccChHHHhhhhceee
Q 008332          162 AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIH  206 (570)
Q Consensus       162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~  206 (570)
                      +|.          .+.+++++.... .....+|..++.+++||+.
T Consensus       319 ~lp----------~kllT~A~~g~~-~~~~~~d~~~~~~ylDy~~  352 (451)
T 3poh_A          319 AMP----------DKLVTVFDWGQM-YGVATVDGVDAKEWIDIVV  352 (451)
T ss_dssp             HCT----------TSEEEEECCTTS-SCCCEETTEEGGGTCCEEE
T ss_pred             hCC----------CCEEEEEeccCc-ccccccChhhHhhhceeee
Confidence            985          333443333222 2347789999999999975

>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A*

Probab=99.83  E-value=2.5e-19  Score=169.01  Aligned_cols=197  Identities=16%  Similarity=0.156  Sum_probs=126.4

Q ss_pred             EEEEecCCC-CCcCCCC-CCCCcceEEEEeEEEeCCce--EEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCC
Q 008332           28 RVGYLNLSE-VSTISGI-NYDLFTHLICSSADINSTTY--QLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTN  103 (570)
Q Consensus        28 vvgY~~~~~-~~~~~~i-~~~~~Thii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~  103 (570)
                      ++.||-... .-++... +...+++|+++|+....++.  .+++... .+..+.+.++.++++  ++|||+||||+..+ 
T Consensus         5 iavYWGqn~~~~~L~~~C~~~~y~~v~laFl~~~g~g~~p~~nl~~~-c~~~l~~dI~~cQ~~--G~kVlLSiGG~~g~-   80 (273)
T 3mu7_A            5 IAVYWGQSFDERSLEATCDSGNYAYVIIGFLNTFGGGQTPALDISGH-SPKGLEPQIKHCQSK--NVKVLLSIGGPAGP-   80 (273)
T ss_dssp             EEEEECSCTTSCCHHHHHHTSCCSEEEEEEEEEBSTTCCCEECSTTC-CTTTHHHHHHHHHHT--TCEEEEEEEESSCS-
T ss_pred             EEEECCCCCCCCCHHHHhcCCCCCEEEEEeEeccCCCCCcccccccc-chHHHHHHHHHHHHC--CCEEEEEeccCCCc-
Confidence            556775432 1122211 12468999999998876652  3454432 235566677766655  79999999997642 


Q ss_pred             cccccccccChHHHHHHHHHHHHHH----------HHcC---CCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcc
Q 008332          104 YSIYSSMVRNSSHRKSFIDSSIRIA----------RLYG---FRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKN  170 (570)
Q Consensus       104 ~~~f~~~~~~~~~r~~fi~siv~~~----------~~~~---~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~  170 (570)
                         +  -+.+++.+++|++.+.+..          +.+|   |||||||||+|.    ..+|..|+++||..+..     
T Consensus        81 ---~--~l~s~~~a~~fa~~l~~~f~p~~~g~~~~rp~g~~~lDGiD~D~E~~~----~~~~~~l~~~Lr~~~~~-----  146 (273)
T 3mu7_A           81 ---Y--SLDSRNDANDLAVYLHKNFLLPPAGTSESRPFGNAVLDGIDFHIEHGG----PSQYQLLANILSSFRLS-----  146 (273)
T ss_dssp             ---B--CCCSHHHHHHHHHHHHHHHTSCCCSSCCCCTTTTCCCSEEEEEECSSC----STTHHHHHHHHHHHHTT-----
T ss_pred             ---e--ecCCHHHHHHHHHHHHHHhccccCCCcccccccccccCceEeecccCC----chhHHHHHHHHHHHhcc-----
Confidence               2  1667888999999999865          4555   999999999984    36899999999987741     


Q ss_pred             cccccceEEEEeecccCCCCCccChHHH-hhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHc
Q 008332          171 STRQQSLLILTARFRYSPPANSYLLNSI-QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIER  249 (570)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~  249 (570)
                          ...+.|++++.-.. ...+.-..| ...+||+++|.||..+  +. ..    +    ..   ..+...+...|+. 
T Consensus       147 ----g~~~~LTaAPqcp~-pd~~l~~~l~~~~~D~v~vQfYNn~~--C~-~~----~----~~---~~~f~~~w~~w~~-  206 (273)
T 3mu7_A          147 ----GSEFALTAAPQCVY-PDPNLGTVINSATFDAIWVQFYNNPQ--CS-YS----A----SN---ASALMNAWKEWSM-  206 (273)
T ss_dssp             ----SSCCEEEECCBSSS-SCTTTHHHHHTTCCSEEEEECSSCGG--GS-CB----T----TB---CHHHHHHHHHHHH-
T ss_pred             ----CCceEEEEcccCCC-cchhHHHHhhcCcccEEEEEeccCCC--cc-cc----c----CC---hhHHHHHHHHHHh-
Confidence                23345555533221 123333344 3689999999998521  11 00    0    00   0122344556664 


Q ss_pred             CCCCCceeeeccc
Q 008332          250 GLSADKLVMCLPF  262 (570)
Q Consensus       250 gvp~~KlvlGip~  262 (570)
                      ++|+.||++|+|.
T Consensus       207 ~~p~~Kv~lGlPA  219 (273)
T 3mu7_A          207 KARTDKVFLGFPA  219 (273)
T ss_dssp             HCCSSCEEEEEES
T ss_pred             cCCcceEEEEeec
Confidence            6999999999994

>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A

Probab=99.82  E-value=5.4e-20  Score=177.67  Aligned_cols=172  Identities=10%  Similarity=0.054  Sum_probs=105.4

Q ss_pred             CCCeEEEEEecCCC--CCcCC-CCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCC
Q 008332           23 AKPWIRVGYLNLSE--VSTIS-GINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQG   99 (570)
Q Consensus        23 ~~~~~vvgY~~~~~--~~~~~-~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~   99 (570)
                      .+..+..-|.....  ..++. ......++|++++|+....++.............+...++.+|++  ++||+|||||+
T Consensus         7 ~~~~~faPYvd~~~~~~~~l~~~~~~~g~~~v~lAFl~~~~g~c~p~w~g~~~~~~~~~~I~~~q~~--G~kVllSiGGa   84 (311)
T 2dsk_A            7 IPEHFFAPYIDMSLSVHKPLVEYAKLTGTKYFTLAFILYSSVYNGPAWAGSIPLEKFVDEVRELREI--GGEVIIAFGGA   84 (311)
T ss_dssp             CCSSEECCEEETTCTTCCCHHHHHHHHSCSEEEEEEEEEETTTTEEEETTTBCGGGGHHHHHHHHTT--TCEEEEEEEES
T ss_pred             CCcccccceEecccCCCCCHHHHHHhcCCCEEEEEEEeccCCCCcccCCCCCchHHHHHHHHHHHHC--CCeEEEEecCC
Confidence            34455556766321  11221 123456899999999864443345444322223455667767655  79999999998


Q ss_pred             CCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceEE
Q 008332          100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLI  179 (570)
Q Consensus       100 ~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~  179 (570)
                      .++      .++.+...+++|+++..+++++|+|||||||||++...   ......++.|+++.          ....++
T Consensus        85 ~Gs------~~~~s~~~~~~~a~~~~~~i~~ygldGIDfDiE~~~~~---d~~~~aL~~l~~~~----------p~~~vs  145 (311)
T 2dsk_A           85 VGP------YLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAGIDA---DKLADALLIVQRER----------PWVKFS  145 (311)
T ss_dssp             SCC------CHHHHCSSHHHHHHHHHHHHHHHTCSEEEEEECSCCCH---HHHHHHHHHHHHHS----------TTCEEE
T ss_pred             CCc------cccccccCHHHHHHHHHHHHHHhCCCcEEEeccCCccH---HHHHHHHHHHHhhC----------CCcEEE
Confidence            752      24555678899999999999999999999999998432   23444444444221          133455


Q ss_pred             EEeecccCCCC-Ccc-ChHHH---hhhhceeeeecccCCCC
Q 008332          180 LTARFRYSPPA-NSY-LLNSI---QRNLNWIHAVTASYYEP  215 (570)
Q Consensus       180 ~~~~~~~~~~~-~~~-~~~~l---~~~vD~i~vm~yd~~~~  215 (570)
                      ++++..+.... .+. -+...   ...+|+||||+|||++.
T Consensus       146 ~TL~~~p~gl~~~g~~~l~~a~~~g~~ld~VniM~~Df~~~  186 (311)
T 2dsk_A          146 FTLPSDPGIGLAGGYGIIETMAKKGVRVDRVNPMTMDYYWT  186 (311)
T ss_dssp             EEEEEETTTEESTHHHHHHHHHHHTCCCCEEEEECCCCSSS
T ss_pred             EEeccCCCCCCcchHHHHHHHHHcCccccEEEEEeeccCCC
Confidence            55443332211 111 12222   33689999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.69  E-value=4.9e-17  Score=159.48  Aligned_cols=107  Identities=23%  Similarity=0.472  Sum_probs=88.2

Q ss_pred             hcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      +++|.+.+.||+|+||.||+|...      ++..||||+++.......++|.+|+.+|++++|||||+++|+|..+++.+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            456888899999999999999853      36789999998766666788999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcCC---------CCcccccHhhhhcc
Q 008332          537 LIYEYMPNKSLDCYLFGLS---------HQKTYFGLEKTCSY  569 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~---------~~~~~~~~~~~~~~  569 (570)
                      ||||||++|+|.++|+..+         .....+++.++++|
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  133 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI  133 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHH
Confidence            9999999999999998643         23445677666543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.68  E-value=8.1e-17  Score=160.13  Aligned_cols=107  Identities=25%  Similarity=0.482  Sum_probs=90.5

Q ss_pred             hcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ++++.+.+.||+|+||.||+|.+.      +++.||||+++.......++|.+|+.+|.+++|||||+++|+|...++.+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            456788899999999999999853      46789999998766666788999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcCCCC-----------cccccHhhhhcc
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQ-----------KTYFGLEKTCSY  569 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~-----------~~~~~~~~~~~~  569 (570)
                      ||||||++|+|.++|++.+..           ..++++.++++|
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  163 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV  163 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHH
Confidence            999999999999999875432           235677666543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.66  E-value=2.3e-16  Score=155.33  Aligned_cols=92  Identities=33%  Similarity=0.514  Sum_probs=78.9

Q ss_pred             cCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      .++++.+.||+|+||.||+|.+.      .++.||||+++... ....++|.+|+.+|.+++|||||+++|+|..+++.+
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            44677799999999999999862      46789999997433 344678999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcCC
Q 008332          537 LIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~  555 (570)
                      ||||||++|+|.++|+.++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~  124 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRS  124 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTC
T ss_pred             EEEEcCCCCcHHHHHHhhC
Confidence            9999999999999998654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.58  E-value=5.4e-15  Score=147.18  Aligned_cols=92  Identities=20%  Similarity=0.292  Sum_probs=75.8

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|++.+.||+|+||.||++. ..+|+.||||++...  .....+.|.+|+.+|.+++|||||++++++...+..+||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            578999999999999999999 466899999999643  33445679999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcCC
Q 008332          541 YMPNKSLDCYLFGLS  555 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~  555 (570)
                      ||++|+|.++|...+
T Consensus       104 y~~gg~L~~~i~~~~  118 (350)
T 4b9d_A          104 YCEGGDLFKRINAQK  118 (350)
T ss_dssp             CCTTCBHHHHHHHTT
T ss_pred             CCCCCcHHHHHHHcC
Confidence            999999999998643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.57  E-value=2.9e-15  Score=146.96  Aligned_cols=103  Identities=25%  Similarity=0.442  Sum_probs=83.5

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      +...+++.+.+.||+|+||.||+|.++  ..||||+++..  .....+.|.+|+.+|++++|||||+++|+|. .+..+|
T Consensus        32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~i  108 (307)
T 3omv_A           32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAI  108 (307)
T ss_dssp             BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEE
Confidence            445567888999999999999999865  36999999643  3344578999999999999999999999885 457899


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      |||||++|+|.++|+..+.   .+++.++++
T Consensus       109 VmEy~~gGsL~~~l~~~~~---~l~~~~~~~  136 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQET---KFQMFQLID  136 (307)
T ss_dssp             EEECCSSCBHHHHHHTSCC---CCCHHHHHH
T ss_pred             EEEcCCCCCHHHHHhhcCC---CCCHHHHHH
Confidence            9999999999999986433   356655543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.54  E-value=9.7e-15  Score=145.14  Aligned_cols=91  Identities=24%  Similarity=0.333  Sum_probs=80.8

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ..|+..+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.+|.+++|||||++++++...+.++||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4588889999999999999994 568999999996444444567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.++|.+.
T Consensus       154 ~gg~L~~~l~~~  165 (346)
T 4fih_A          154 EGGALTDIVTHT  165 (346)
T ss_dssp             TTEEHHHHHHHS
T ss_pred             CCCcHHHHHHcC
Confidence            999999999753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.54  E-value=7.9e-15  Score=147.04  Aligned_cols=104  Identities=23%  Similarity=0.400  Sum_probs=86.9

Q ss_pred             ccChHHHHHHhcCcccceeeeccCCccEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHHccCC-CCccc
Q 008332          453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPC------GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQH-VNLIR  524 (570)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h-~niv~  524 (570)
                      .++..+++..+++|++.+.||+|+||.||+|....      ++.||||.+.... ....+.|.+|+.+|.+++| ||||+
T Consensus        53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            35566788888999999999999999999998432      3579999997543 3345689999999999965 99999


Q ss_pred             eeEEEEeC-CeeEEEEecCCCCCHHHHHhcCCC
Q 008332          525 VLGFCIDS-EERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       525 l~g~~~~~-~~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      ++|+|... .+++||||||++|+|.++|++.+.
T Consensus       133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~  165 (353)
T 4ase_A          133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN  165 (353)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGG
T ss_pred             EEEEEEecCCEEEEEEEcCCCCCHHHHHHhccc
Confidence            99999765 578999999999999999986543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.52  E-value=2.2e-14  Score=146.27  Aligned_cols=92  Identities=24%  Similarity=0.329  Sum_probs=81.9

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ...|+..+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.+|.+++|||||++++++...+.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            35688889999999999999994 56899999999755545556789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      |++|+|.++|...
T Consensus       230 ~~gG~L~~~i~~~  242 (423)
T 4fie_A          230 LEGGALTDIVTHT  242 (423)
T ss_dssp             CTTEEHHHHHHHS
T ss_pred             CCCCcHHHHHhcc
Confidence            9999999999753

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.50  E-value=3.4e-14  Score=139.95  Aligned_cols=95  Identities=24%  Similarity=0.366  Sum_probs=75.3

Q ss_pred             CcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHH--HHHHHHHccCCCCccceeEEEEeCC----eeEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFK--NEVMLTAKLQHVNLIRVLGFCIDSE----ERMLI  538 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~--~e~~~l~~l~h~niv~l~g~~~~~~----~~~lv  538 (570)
                      ++.+.+.||+|+||.||+|.+. |+.||||++...   ..+.+.  +|+..+.+++|||||+++|+|...+    .++||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            4778899999999999999985 899999999532   233344  4555567889999999999998753    57999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      ||||++|+|.++|+..     .+++.+.++
T Consensus        80 ~Ey~~~gsL~~~l~~~-----~l~~~~~~~  104 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRY-----TVTVEGMIK  104 (303)
T ss_dssp             EECCTTCBHHHHHHHC-----CBCHHHHHH
T ss_pred             ecCCCCCcHHHHHHhC-----CCCHHHHHH
Confidence            9999999999999854     245555443

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.50  E-value=5.3e-14  Score=136.86  Aligned_cols=88  Identities=25%  Similarity=0.372  Sum_probs=74.6

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC----CeeEEEE
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS----EERMLIY  539 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~----~~~~lv~  539 (570)
                      ++.++||+|+||.||+|.. .++..||+|.+...  .....+.|.+|+.+|++++|||||++++++...    ..++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            5667899999999999994 56889999999632  334456799999999999999999999998652    4579999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      |||++|+|.++|++.
T Consensus       109 Ey~~gg~L~~~l~~~  123 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF  123 (290)
T ss_dssp             ECCCSCBHHHHHHHH
T ss_pred             eCCCCCCHHHHHHhc
Confidence            999999999999853

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.49  E-value=2.9e-14  Score=139.53  Aligned_cols=91  Identities=23%  Similarity=0.285  Sum_probs=80.7

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|++.++||+|+||.||++. ..+++.||+|++...   .....+.+.+|+.+|.+++|||||++++++.+.+..+|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            468999999999999999999 466899999999632   2234567999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      |||++|+|.++|.+.
T Consensus       112 Ey~~gG~L~~~i~~~  126 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI  126 (311)
T ss_dssp             CCCTTEEHHHHHHHH
T ss_pred             ecCCCCCHHHHHHHc
Confidence            999999999999853

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.45  E-value=1.8e-13  Score=134.31  Aligned_cols=91  Identities=21%  Similarity=0.309  Sum_probs=75.5

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCC---------
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE---------  533 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~---------  533 (570)
                      +|++.+.||+|+||.||+|. ..+|+.||||+++... ....+.+.+|+.+|.+++|||||++++++...+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            47888999999999999999 4568999999996433 334567999999999999999999999987543         


Q ss_pred             ---eeEEEEecCCCCCHHHHHhcCC
Q 008332          534 ---ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       534 ---~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                         .++||||||++|+|.++|.+..
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~  110 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRC  110 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcC
Confidence               3689999999999999998653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.44  E-value=1.2e-13  Score=136.74  Aligned_cols=95  Identities=17%  Similarity=0.206  Sum_probs=79.7

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +.|...+.||+|+||.||+|. ..+|+.||||+++....     +.+|+.+|.+++|||||++++++...+.++||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            457788899999999999999 45689999999964322     247999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCcccccHhhhh
Q 008332          543 PNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       543 ~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++|+|.++|++..    ++++.+++
T Consensus       133 ~gg~L~~~l~~~~----~l~e~~~~  153 (336)
T 4g3f_A          133 EGGSLGQLIKQMG----CLPEDRAL  153 (336)
T ss_dssp             TTCBHHHHHHHHS----SCCHHHHH
T ss_pred             CCCcHHHHHHHcC----CCCHHHHH
Confidence            9999999998532    35555443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.44  E-value=2.7e-13  Score=130.75  Aligned_cols=90  Identities=22%  Similarity=0.390  Sum_probs=74.7

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||++. ..+|+.||+|++....   ......+.+|+.+|++++|||||++++++...+..++||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            578999999999999999999 4668999999996432   233567999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||| +|+|.++|.+.
T Consensus        93 Ey~-~g~L~~~l~~~  106 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR  106 (275)
T ss_dssp             ECC-CEEHHHHHHHS
T ss_pred             eCC-CCCHHHHHHHc
Confidence            999 68999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.40  E-value=8.8e-14  Score=136.07  Aligned_cols=91  Identities=19%  Similarity=0.241  Sum_probs=73.3

Q ss_pred             cCcccceeeeccCCccEEEEEe----cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ++|++.+.||+|+||.||+++.    ..++.||+|+++...  ......+.+|+.+|.+++|||||++++++...+..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            4689999999999999999984    246799999996432  2233468899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      |||||++|+|.++|.+.
T Consensus       104 vmEy~~gg~L~~~l~~~  120 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE  120 (304)
T ss_dssp             EECCCTTCEEHHHHHHH
T ss_pred             EEEcCCCCCHHHHHHhc
Confidence            99999999999999863

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.36  E-value=1.6e-12  Score=139.24  Aligned_cols=92  Identities=23%  Similarity=0.352  Sum_probs=82.6

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ++|.+.+.||+|+||.||+|.. .+|+.||+|.+........+.+.+|+.+|..++|||||++++++.....++||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            5789999999999999999994 568999999997655555677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC
Q 008332          543 PNKSLDCYLFGLS  555 (570)
Q Consensus       543 ~~GsL~~~L~~~~  555 (570)
                      ++|+|.++|.+++
T Consensus       237 ~gg~L~~~i~~~~  249 (573)
T 3uto_A          237 SGGELFEKVADEH  249 (573)
T ss_dssp             CCCBHHHHHTCTT
T ss_pred             CCCcHHHHHHHhC
Confidence            9999999997643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.33  E-value=1.4e-12  Score=130.10  Aligned_cols=119  Identities=37%  Similarity=0.645  Sum_probs=100.0

Q ss_pred             CccccChHHHHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCc-ccHHHHHHHHHHHHccCCCCccceeEE
Q 008332          450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKLQHVNLIRVLGF  528 (570)
Q Consensus       450 ~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~h~niv~l~g~  528 (570)
                      ....++..++....++|...+.||+|+||.||++...+++.||||++..... .....|.+|+.++.+++||||++++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            3456788999999999999999999999999999977789999999964322 222368999999999999999999999


Q ss_pred             EEeCCeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          529 CIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       529 ~~~~~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      +......++||||+++|+|.++|+........+++.+++.
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  135 (326)
T 3uim_A           96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR  135 (326)
T ss_dssp             ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHH
T ss_pred             EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHH
Confidence            9999999999999999999999998766666666665543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.32  E-value=8.1e-13  Score=131.60  Aligned_cols=113  Identities=36%  Similarity=0.625  Sum_probs=95.8

Q ss_pred             hHHHHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       456 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      +.++....++|...+.||+|+||.||+|...+++.||+|.+........+.+.+|+.++.+++||||+++++++...+..
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence            33445566789999999999999999999877999999998766666677899999999999999999999999988999


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          536 MLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      ++||||+++|+|.+++.........+++.+++.
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  143 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE  143 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHH
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHH
Confidence            999999999999999987655455566665543

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.30  E-value=4.1e-12  Score=129.49  Aligned_cols=90  Identities=18%  Similarity=0.335  Sum_probs=76.1

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC------Ce
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------EE  534 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------~~  534 (570)
                      ++|++.+.||+|+||.||+|. ..+|+.||||+++...  ....+.+++|+.+|.+++|||||++++++...      ..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            468899999999999999999 4669999999996432  23346789999999999999999999987643      46


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++||||||+ |+|.++|.+.
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~  152 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS  152 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS
T ss_pred             EEEEEeCCC-CCHHHHHHhc
Confidence            899999996 7899999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.27  E-value=1.7e-11  Score=121.23  Aligned_cols=93  Identities=23%  Similarity=0.368  Sum_probs=83.3

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .++|...+.||+|+||.||++.. .+++.||+|.+........+.|.+|+.++.+++||||+++++++......++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            35688889999999999999995 55889999998766666677899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      +++|+|.+++....
T Consensus        89 ~~~~~L~~~l~~~~  102 (310)
T 3s95_A           89 IKGGTLRGIIKSMD  102 (310)
T ss_dssp             CTTCBHHHHHHHCC
T ss_pred             cCCCcHHHHHHhcc
Confidence            99999999998643

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.24  E-value=4.9e-11  Score=118.66  Aligned_cols=101  Identities=25%  Similarity=0.294  Sum_probs=86.5

Q ss_pred             ccChHHHHHHhcC----------cccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCC
Q 008332          453 VYSLADIEAATER----------FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN  521 (570)
Q Consensus       453 ~~~~~~~~~~~~~----------~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~n  521 (570)
                      .++.+++..+...          +...+.||+|+||.||++... +|+.||||.+........+.+.+|+.++.+++|||
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n  103 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN  103 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence            3566666655543          566679999999999999964 68999999997665566778999999999999999


Q ss_pred             ccceeEEEEeCCeeEEEEecCCCCCHHHHHhc
Q 008332          522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       522 iv~l~g~~~~~~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      |+++++.+...+..++||||+++|+|.+++..
T Consensus       104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  135 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ  135 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHHHHHTT
T ss_pred             cceEEEEEEECCEEEEEEecCCCCCHHHHHHh
Confidence            99999999999999999999999999999875

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.23  E-value=3.6e-11  Score=118.21  Aligned_cols=92  Identities=20%  Similarity=0.390  Sum_probs=82.0

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ..+|++.+.||+|+||.||++. ..+++.||+|.+........+.+.+|+.++.+++||||+++++.+...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            3568888999999999999998 466889999999655445567799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++.+.
T Consensus        99 ~~~~~L~~~~~~~  111 (297)
T 3fxz_A           99 LAGGSLTDVVTET  111 (297)
T ss_dssp             CTTCBHHHHHHHS
T ss_pred             CCCCCHHHHHhhc
Confidence            9999999999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.20  E-value=2.8e-11  Score=121.88  Aligned_cols=89  Identities=24%  Similarity=0.258  Sum_probs=77.2

Q ss_pred             HhcCcccceeeeccCCccEEEEEe----cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  536 (570)
                      ..++|++.+.||+|+||.||+|+.    ..++.||+|.+....  ....+.+|+.+|..+ +||||+++++++...+..+
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            456799999999999999999983    246789999985432  345688999999998 6999999999999999999


Q ss_pred             EEEecCCCCCHHHHHh
Q 008332          537 LIYEYMPNKSLDCYLF  552 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~  552 (570)
                      ||||||++|+|.+++.
T Consensus        97 lvmE~~~g~~L~~~~~  112 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN  112 (361)
T ss_dssp             EEEECCCCCCHHHHHT
T ss_pred             EEEeCCCcccHHHHHc
Confidence            9999999999999985

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.19  E-value=7.3e-11  Score=114.10  Aligned_cols=92  Identities=24%  Similarity=0.471  Sum_probs=81.5

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .++|++.+.||+|+||.||++...+++.||+|.+.... ...+.+.+|+.++.+++||||+++++++......++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            45688889999999999999998778899999996433 33467999999999999999999999999888999999999


Q ss_pred             CCCCHHHHHhcCC
Q 008332          543 PNKSLDCYLFGLS  555 (570)
Q Consensus       543 ~~GsL~~~L~~~~  555 (570)
                      ++|+|.+++...+
T Consensus        88 ~~~~L~~~l~~~~  100 (269)
T 4hcu_A           88 EHGCLSDYLRTQR  100 (269)
T ss_dssp             TTCBHHHHHHTTT
T ss_pred             CCCcHHHHHHhcC
Confidence            9999999998644

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.19  E-value=1.6e-11  Score=128.28  Aligned_cols=94  Identities=28%  Similarity=0.379  Sum_probs=82.6

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++...++|.+.+.||+|+||.||+|....+..||||.++... ...+.|.+|+.+|.+++||||+++++++. .+..++|
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv  260 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII  260 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence            445567789999999999999999998878899999997543 45678999999999999999999999985 6778999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.++|+..
T Consensus       261 ~e~~~~g~L~~~l~~~  276 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSD  276 (454)
T ss_dssp             ECCCTTCBHHHHHHSH
T ss_pred             EeecCCCcHHHHHHhc
Confidence            9999999999999853

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.19  E-value=2.9e-11  Score=122.89  Aligned_cols=92  Identities=30%  Similarity=0.478  Sum_probs=79.4

Q ss_pred             hcCcccceeeeccCCccEEEEEec----CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..+|.+.+.||+|+||.||+|...    .+..||||.++.. .....+.|.+|+.++.+++||||+++++++......++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            356888899999999999999853    4678999999643 33445689999999999999999999999998889999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.++|+..
T Consensus       124 v~e~~~~~sL~~~l~~~  140 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKH  140 (373)
T ss_dssp             EEECCTTCBHHHHHHTT
T ss_pred             EEeCCCCCcHHHHHHhC
Confidence            99999999999999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.18  E-value=4.5e-11  Score=121.39  Aligned_cols=93  Identities=25%  Similarity=0.441  Sum_probs=80.1

Q ss_pred             hcCcccceeeeccCCccEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEEeC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP--------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDS  532 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~  532 (570)
                      .++|.+.+.||+|+||.||++...        .+..||||.++... ....+.+.+|+.++.++ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            467888999999999999999842        34579999997543 23456799999999999 899999999999988


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      +..++||||+++|+|.++|...+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~  182 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARR  182 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTC
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhC
Confidence            99999999999999999998754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.18  E-value=2e-11  Score=124.34  Aligned_cols=93  Identities=22%  Similarity=0.426  Sum_probs=80.9

Q ss_pred             HhcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ..++|.+.+.||+|+||.||+|... +++.||||.++... ......|.+|+.+|.+++||||+++++++...+..++||
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            4467888999999999999999964 68899999986432 233457899999999999999999999999888999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|+..
T Consensus       192 e~~~~g~L~~~l~~~  206 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTE  206 (377)
T ss_dssp             ECCTTCBHHHHHHHH
T ss_pred             EcCCCCCHHHHHHhc
Confidence            999999999999853

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.18  E-value=2.4e-11  Score=120.32  Aligned_cols=96  Identities=25%  Similarity=0.400  Sum_probs=82.0

Q ss_pred             HHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE  533 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~  533 (570)
                      ....+|.+.+.||+|+||.||++..      ..++.||+|.++.. .....+.+.+|+.++.+++||||+++++++....
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   99 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG   99 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence            3456788999999999999999984      23478999999743 3344567999999999999999999999999889


Q ss_pred             eeEEEEecCCCCCHHHHHhcCCC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      ..++||||+++|+|.+++...+.
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~  122 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRK  122 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTT
T ss_pred             ceEEEEeecCCCCHHHHHHHHhh
Confidence            99999999999999999987543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.18  E-value=4.5e-11  Score=127.77  Aligned_cols=91  Identities=22%  Similarity=0.244  Sum_probs=74.4

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHH---HHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFK---NEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~---~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ++|.+.++||+|+||.||++. ..+|+.||+|++....   ........   .++.++..++|||||++++++.+.+.++
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            458889999999999999999 4568999999995321   12222333   3456777889999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      ||||||++|+|.++|.+.
T Consensus       269 lVmEy~~GGdL~~~l~~~  286 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQH  286 (689)
T ss_dssp             EEECCCCSCBHHHHHHHH
T ss_pred             EEEecCCCCcHHHHHHhc
Confidence            999999999999999853

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.18  E-value=6.2e-11  Score=118.17  Aligned_cols=92  Identities=21%  Similarity=0.355  Sum_probs=81.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ..+|.+.+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.++..++||||+++++++......++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            45688999999999999999994 67899999999643  3344567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus        94 e~~~~~~L~~~l~~~  108 (328)
T 3fe3_A           94 EYASGGEVFDYLVAH  108 (328)
T ss_dssp             CCCTTCBHHHHHHHH
T ss_pred             ECCCCCcHHHHHHHc
Confidence            999999999999753

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.18  E-value=9.9e-11  Score=115.52  Aligned_cols=115  Identities=37%  Similarity=0.619  Sum_probs=93.4

Q ss_pred             ccccChHHHHHHhcCcccc------eeeeccCCccEEEEEecCCcEEEEEEecCCC----cccHHHHHHHHHHHHccCCC
Q 008332          451 LRVYSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS----TQGFEEFKNEVMLTAKLQHV  520 (570)
Q Consensus       451 ~~~~~~~~~~~~~~~~~~~------~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~----~~~~~~f~~e~~~l~~l~h~  520 (570)
                      ...+++.++...+.+|...      +.||+|+||.||+|.. .++.||+|.+....    ....+.|.+|+.++.+++||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            3557888899998888766      8999999999999986 48899999986422    23356799999999999999


Q ss_pred             CccceeEEEEeCCeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       521 niv~l~g~~~~~~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||+++++++......++||||+++|+|.+++..... ...+++.+++
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~  136 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRC  136 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHH
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHH
Confidence            999999999988899999999999999999985322 2334554443

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.18  E-value=5.6e-11  Score=118.41  Aligned_cols=93  Identities=29%  Similarity=0.450  Sum_probs=79.9

Q ss_pred             hcCcccceeeeccCCccEEEEEec----CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..+|.+.+.||+|+||.||+|...    .+..||||.+... .....+.|.+|+.++.+++||||+++++++......++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            456888899999999999999953    3456999999743 33445679999999999999999999999988889999


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      ||||+++|+|.++|+...
T Consensus       128 v~e~~~~~~L~~~l~~~~  145 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHD  145 (325)
T ss_dssp             EEECCTTCBHHHHHHTTT
T ss_pred             EeeCCCCCcHHHHHHhcc
Confidence            999999999999997643

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.17  E-value=3.9e-11  Score=120.38  Aligned_cols=96  Identities=27%  Similarity=0.517  Sum_probs=82.6

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeC
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS  532 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~  532 (570)
                      ....++|.+.+.||+|+||.||++...      +++.||+|.++... ....+.|.+|+.++.+++||||+++++++...
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            445677899999999999999999964      34789999997543 33456799999999999999999999999988


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ...++||||+++|+|.++|....
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~  145 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMS  145 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTC
T ss_pred             CceEEEEecCCCCcHHHHHHHhC
Confidence            99999999999999999998643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.17  E-value=3.3e-11  Score=121.44  Aligned_cols=102  Identities=16%  Similarity=0.278  Sum_probs=83.4

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-----CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-----STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-----~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      +.|++.+.||+|+||.||++.. .+++.||+|.+...     .....+.+.+|+.++..++||||+++++++......++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4588899999999999999984 56899999998521     12245789999999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhh
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      ||||+++|+|.+++.........++..+
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~  131 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAV  131 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHH
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHH
Confidence            9999999999998875433333344443

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.17  E-value=3.8e-11  Score=117.25  Aligned_cols=103  Identities=19%  Similarity=0.266  Sum_probs=84.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.+... .....+.+.+|+.++.+++||||+++++++......++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4588889999999999999994 56889999998643 334567899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      +++|+|.+++.........++...+
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~  126 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYV  126 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHH
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHH
Confidence            9999999999754333334444433

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.17  E-value=5.5e-11  Score=125.56  Aligned_cols=94  Identities=33%  Similarity=0.555  Sum_probs=82.4

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +....+|.+.+.||+|+||.||+|... .+..||||.++... ...+.|.+|+.+|.+++||||++++++|......++|
T Consensus       216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv  294 (495)
T 1opk_A          216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII  294 (495)
T ss_dssp             BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence            334567888999999999999999965 47899999996433 3467899999999999999999999999988999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.++|+..
T Consensus       295 ~E~~~~g~L~~~l~~~  310 (495)
T 1opk_A          295 TEFMTYGNLLDYLREC  310 (495)
T ss_dssp             EECCTTCBHHHHHHHS
T ss_pred             EEccCCCCHHHHHHhc
Confidence            9999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.17  E-value=2.9e-11  Score=122.21  Aligned_cols=103  Identities=23%  Similarity=0.435  Sum_probs=86.0

Q ss_pred             cChHHHHHHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccce
Q 008332          454 YSLADIEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRV  525 (570)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l  525 (570)
                      ++...++...++|.+.+.||+|+||.||++..      .+++.||||+++... ....+.+.+|+.++.++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            45566777788999999999999999999973      235789999997533 33446799999999999 79999999


Q ss_pred             eEEEEeCC-eeEEEEecCCCCCHHHHHhcCCC
Q 008332          526 LGFCIDSE-ERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       526 ~g~~~~~~-~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      ++++...+ ..++||||+++|+|.++|+....
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~  123 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN  123 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTT
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccc
Confidence            99998765 58999999999999999997653

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.17  E-value=2.4e-11  Score=126.86  Aligned_cols=92  Identities=29%  Similarity=0.463  Sum_probs=80.4

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      +...++|++.+.||+|+||.||+|....+..||||.++... ...+.|.+|+.+|.+++||||+++++++.. +..++||
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~  257 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT  257 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence            44566788999999999999999998877889999996433 345689999999999999999999999865 7789999


Q ss_pred             ecCCCCCHHHHHhc
Q 008332          540 EYMPNKSLDCYLFG  553 (570)
Q Consensus       540 e~~~~GsL~~~L~~  553 (570)
                      ||+++|+|.++|+.
T Consensus       258 e~~~~gsL~~~l~~  271 (452)
T 1fmk_A          258 EYMSKGSLLDFLKG  271 (452)
T ss_dssp             CCCTTCBHHHHHSH
T ss_pred             hhhcCCCHHHHHHh
Confidence            99999999999975

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.17  E-value=1.1e-10  Score=118.00  Aligned_cols=92  Identities=24%  Similarity=0.285  Sum_probs=80.2

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc------ccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      .+.|.+.+.||+|+||.||++.. .+|+.+|+|.+.....      ...+.+.+|+.++.+++||||+++++++......
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            35688899999999999999994 4688999999864321      1356899999999999999999999999999999


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++||||+++|+|.++|...
T Consensus        91 ~lv~e~~~gg~L~~~l~~~  109 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK  109 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC
T ss_pred             EEEEEcCCCCcHHHHHHhc
Confidence            9999999999999999753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.16  E-value=4.7e-11  Score=121.13  Aligned_cols=93  Identities=28%  Similarity=0.513  Sum_probs=80.1

Q ss_pred             hcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      ..+|.+.+.||+|+||.||+|...      .++.||||.++.. .......+.+|+.++.+++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            456888899999999999999842      3568999999643 334456799999999999999999999999988899


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++||||+++|+|.++|...+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~  169 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETR  169 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHS
T ss_pred             EEEEEeCCCCCHHHHHHhhc
Confidence            99999999999999998654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.16  E-value=7.5e-11  Score=123.05  Aligned_cols=90  Identities=27%  Similarity=0.478  Sum_probs=79.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC-eeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLIYE  540 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e  540 (570)
                      ...+|++.+.||+|+||.||+|... ++.||||.++...  ..+.|.+|+.+|.+++||||+++++++.... ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            4466888899999999999999976 7899999997543  3467999999999999999999999988765 7899999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.++|+..
T Consensus       268 ~~~~g~L~~~l~~~  281 (450)
T 1k9a_A          268 YMAKGSLVDYLRSR  281 (450)
T ss_dssp             CCTTCBHHHHHHHH
T ss_pred             ecCCCcHHHHHHhc
Confidence            99999999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.16  E-value=5.8e-11  Score=117.42  Aligned_cols=94  Identities=26%  Similarity=0.426  Sum_probs=81.7

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .....+|++.+.||+|+||.||++... ++.||||.+....  ....+.|.+|+.++.+++||||+++++++......++
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI  111 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence            344567889999999999999999864 8899999986433  2334679999999999999999999999998889999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.++|...
T Consensus       112 v~e~~~~~~L~~~l~~~  128 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKS  128 (309)
T ss_dssp             EEECCTTCBHHHHHHST
T ss_pred             EEecCCCCcHHHHHhhc
Confidence            99999999999999864

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.16  E-value=3.9e-11  Score=116.98  Aligned_cols=93  Identities=27%  Similarity=0.432  Sum_probs=79.2

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ...++|++.+.||+|+||.||++....+..||+|.+.... ...+.+.+|+.++.+++||||+++++++......++|||
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            3456788899999999999999998878899999996443 234679999999999999999999999988889999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus       100 ~~~~~~L~~~l~~~  113 (283)
T 3gen_A          100 YMANGCLLNYLREM  113 (283)
T ss_dssp             CCTTCBHHHHHHCG
T ss_pred             ccCCCcHHHHHHHh
Confidence            99999999999863

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.15  E-value=1.1e-10  Score=113.99  Aligned_cols=90  Identities=11%  Similarity=0.113  Sum_probs=79.4

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|++.+.||+|+||.||+|.. ..++.||+|.+.....   ...+.|.+|+.++.+++||||+++++++...+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            5688899999999999999995 4588999999974332   23467999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhc
Q 008332          540 EYMPNKSLDCYLFG  553 (570)
Q Consensus       540 e~~~~GsL~~~L~~  553 (570)
                      ||+++|+|.++|..
T Consensus       111 e~~~g~~L~~~l~~  124 (286)
T 3uqc_A          111 EWIRGGSLQEVADT  124 (286)
T ss_dssp             ECCCEEEHHHHHTT
T ss_pred             EecCCCCHHHHHhc
Confidence            99999999999964

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.15  E-value=5e-11  Score=115.17  Aligned_cols=102  Identities=26%  Similarity=0.351  Sum_probs=83.8

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv  538 (570)
                      ..+|.+.+.||+|+||.||++... ++.+|||.+....  ....+.|.+|+.++.+++||||+++++++...  ...++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            346888899999999999999976 8899999996432  33456799999999999999999999999877  678999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |||+++|+|.+++.....  ..+++.+++
T Consensus        88 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~  114 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTN--FVVDQSQAV  114 (271)
T ss_dssp             EECCTTCBHHHHHHSCSS--CCCCHHHHH
T ss_pred             ecccCCCcHHHHHhhccc--CCCCHHHHH
Confidence            999999999999986432  234544443

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.15  E-value=1e-10  Score=116.19  Aligned_cols=92  Identities=24%  Similarity=0.395  Sum_probs=79.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCC--eeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE--ERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv~  539 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||||++.... ....+.+.+|+.++.+++||||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            5688899999999999999995 458899999996432 344677899999999999999999999988765  779999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      ||+++|+|.+++....
T Consensus        89 e~~~~~~L~~~l~~~~  104 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPS  104 (319)
T ss_dssp             ECCTTCBHHHHHHSGG
T ss_pred             eCCCCCCHHHHHHHhc
Confidence            9999999999998643

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.15  E-value=1.6e-10  Score=114.82  Aligned_cols=91  Identities=19%  Similarity=0.249  Sum_probs=79.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .++|.+.+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++..++||||+++++++...+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            35688899999999999999995 458899999986432 3345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        83 ~~g~~L~~~l~~~   95 (321)
T 1tki_A           83 ISGLDIFERINTS   95 (321)
T ss_dssp             CCCCBHHHHHTSS
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999999754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.15  E-value=9e-11  Score=114.68  Aligned_cols=92  Identities=29%  Similarity=0.496  Sum_probs=80.8

Q ss_pred             hcCcccceeeeccCCccEEEEEec-CC-------cEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP-CG-------EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~-~~-------~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      .++|.+.+.||+|+||.||++... .+       ..||+|.+........+.|.+|+.++.+++||||+++++++...+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            356888899999999999999843 23       4799999976655667789999999999999999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++||||+++|+|.+++...
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~  106 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKN  106 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHT
T ss_pred             CEEEEECCCCCCHHHHHHhC
Confidence            99999999999999999864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.14  E-value=1.7e-10  Score=115.02  Aligned_cols=92  Identities=18%  Similarity=0.270  Sum_probs=77.5

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC--------
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE--------  533 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~--------  533 (570)
                      .+|++.+.||+|+||.||++... +++.||||+++.. .....+.+.+|+.++.+++||||+++++++....        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            45888899999999999999954 6899999999643 3344578999999999999999999999986543        


Q ss_pred             -------------------------------------------------eeEEEEecCCCCCHHHHHhcCC
Q 008332          534 -------------------------------------------------ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       534 -------------------------------------------------~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                                                                       ..++||||+++|+|.+++....
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  156 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC  156 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc
Confidence                                                             2799999999999999998654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.14  E-value=5.1e-11  Score=118.15  Aligned_cols=106  Identities=21%  Similarity=0.334  Sum_probs=84.9

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEe----CCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID----SEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~----~~~~~  536 (570)
                      ..++|++.+.||+|+||.||++.. .+++.||+|++........+.+.+|+.++.+++||||+++++++..    ....+
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            346788999999999999999994 6689999999866555566789999999999999999999999873    24789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +|+||+++|+|.+++...+.....+++.+++
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  137 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQIL  137 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHH
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHH
Confidence            9999999999999998644444455555443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.14  E-value=5.2e-11  Score=116.86  Aligned_cols=93  Identities=32%  Similarity=0.564  Sum_probs=80.5

Q ss_pred             hcCcccceeeeccCCccEEEEEe-----cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC--Cee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~  535 (570)
                      .++|++.+.||+|+||.||++.+     .+++.||||++........+.|.+|+.++.+++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            35688899999999999999984     35789999999766666667899999999999999999999998654  458


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++||||+++|+|.+++....
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~  108 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHK  108 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCG
T ss_pred             EEEEEeCCCCCHHHHHHhcc
Confidence            99999999999999998653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.14  E-value=1.2e-10  Score=118.66  Aligned_cols=92  Identities=25%  Similarity=0.330  Sum_probs=81.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .++|.+.+.||+|+||.||+|.. .+++.+|+|.+..........+.+|+.+|.+++||||+++++++......++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            35688999999999999999995 46889999999755544556799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus       130 ~~gg~L~~~l~~~  142 (387)
T 1kob_A          130 LSGGELFDRIAAE  142 (387)
T ss_dssp             CCCCBHHHHTTCT
T ss_pred             CCCCcHHHHHHhh
Confidence            9999999999854

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.14  E-value=1.4e-10  Score=113.80  Aligned_cols=92  Identities=25%  Similarity=0.420  Sum_probs=79.9

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|++.+.||+|+||.||++.. ..++.||+|.+....   ....+.|.+|+.++.+++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            35688899999999999999994 568899999985322   23346799999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.+++...
T Consensus        90 ~e~~~g~~L~~~l~~~  105 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH  105 (294)
T ss_dssp             EECCCSCBHHHHHHHH
T ss_pred             EeCCCCCCHHHHHHhc
Confidence            9999999999999753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.14  E-value=3.2e-11  Score=128.65  Aligned_cols=93  Identities=29%  Similarity=0.452  Sum_probs=80.9

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++...++|++.+.||+|+||.||+|....+..||||.++... ...+.|.+|+.+|.+++||||+++++++.. +..+||
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv  339 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  339 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence            344567788999999999999999998877889999996533 345789999999999999999999999865 678999


Q ss_pred             EecCCCCCHHHHHhc
Q 008332          539 YEYMPNKSLDCYLFG  553 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~  553 (570)
                      |||+++|+|.++|+.
T Consensus       340 ~e~~~~gsL~~~l~~  354 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKG  354 (535)
T ss_dssp             ECCCTTEEHHHHHSH
T ss_pred             eehhcCCcHHHHHhh
Confidence            999999999999975

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.13  E-value=7.3e-11  Score=119.92  Aligned_cols=88  Identities=27%  Similarity=0.352  Sum_probs=73.2

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      ...+.||+|+||.||+|.. .+++.||+|+++.......+.|.+|+.++.+++||||+++++++...+..++||||+++|
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            3357899999999999984 568899999997655555678999999999999999999999999999999999999999


Q ss_pred             CHHHHHhcC
Q 008332          546 SLDCYLFGL  554 (570)
Q Consensus       546 sL~~~L~~~  554 (570)
                      +|.++|...
T Consensus       172 ~L~~~l~~~  180 (373)
T 2x4f_A          172 ELFDRIIDE  180 (373)
T ss_dssp             EEHHHHHHT
T ss_pred             cHHHHHHhc
Confidence            999999754

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.13  E-value=2e-10  Score=114.38  Aligned_cols=91  Identities=24%  Similarity=0.306  Sum_probs=79.4

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc------ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4578889999999999999995 4688999999864321      23578999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +||||+++|+|.+++...
T Consensus        91 lv~e~~~~~~L~~~l~~~  108 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEK  108 (326)
T ss_dssp             EEEECCCSCBHHHHHTTS
T ss_pred             EEEEcCCCCCHHHHHHhc
Confidence            999999999999999753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.13  E-value=1.2e-10  Score=113.12  Aligned_cols=92  Identities=24%  Similarity=0.339  Sum_probs=81.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .++|.+.+.||+|+||.||++.. ..+..+|+|.+........+.+.+|+.++.+++||||+++++++......++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            34588889999999999999995 44778999999765555677899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        88 ~~~~~L~~~~~~~  100 (277)
T 3f3z_A           88 CTGGELFERVVHK  100 (277)
T ss_dssp             CCSCBHHHHHHHH
T ss_pred             cCCCcHHHHHHHc
Confidence            9999999998753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.13  E-value=1.1e-10  Score=112.75  Aligned_cols=91  Identities=29%  Similarity=0.410  Sum_probs=80.9

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .++|++.+.||+|+||.||++....+..||+|.+.... ...+.+.+|+.++.+++||||+++++++......++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            45688899999999999999998878899999996433 23467999999999999999999999998888999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+++...
T Consensus        86 ~~~~L~~~l~~~   97 (268)
T 3sxs_A           86 SNGCLLNYLRSH   97 (268)
T ss_dssp             TTCBHHHHHHHH
T ss_pred             CCCcHHHHHHHc
Confidence            999999999863

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.13  E-value=5.1e-11  Score=123.31  Aligned_cols=98  Identities=20%  Similarity=0.220  Sum_probs=82.0

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeC
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS  532 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~  532 (570)
                      .++....++|.+.++||+|+||.||++... +++.||+|++....   ......+.+|..++..++||||+++++++...
T Consensus        67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  146 (437)
T 4aw2_A           67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD  146 (437)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence            344455678999999999999999999954 47889999985321   11223488999999999999999999999999


Q ss_pred             CeeEEEEecCCCCCHHHHHhcC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ...++|||||++|+|.++|.+.
T Consensus       147 ~~~~lV~Ey~~gg~L~~~l~~~  168 (437)
T 4aw2_A          147 NNLYLVMDYYVGGDLLTLLSKF  168 (437)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTT
T ss_pred             CEEEEEEecCCCCcHHHHHHHc
Confidence            9999999999999999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.13  E-value=8.6e-11  Score=114.57  Aligned_cols=104  Identities=25%  Similarity=0.319  Sum_probs=85.1

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ..+|.+.+.||+|+||.||++.. .+++.||+|.+....  ......+.+|+..+.++ +||||+++++++...+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            35688889999999999999995 468999999986432  33456788999999999 999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      |||+++|+|.+++.........+++.++
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~  117 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAEL  117 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHH
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHH
Confidence            9999999999999864332334454443

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.13  E-value=1.1e-10  Score=116.68  Aligned_cols=91  Identities=20%  Similarity=0.166  Sum_probs=79.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||++.. .+++.||+|.++..   .......+.+|+.++.+++||||+++++++...+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            5688899999999999999995 46899999999632   2234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|...
T Consensus        85 E~~~gg~L~~~l~~~   99 (337)
T 1o6l_A           85 EYANGGELFFHLSRE   99 (337)
T ss_dssp             ECCTTCBHHHHHHHH
T ss_pred             eCCCCCcHHHHHHhc
Confidence            999999999999753

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.12  E-value=1.3e-10  Score=118.51  Aligned_cols=95  Identities=25%  Similarity=0.421  Sum_probs=81.1

Q ss_pred             HHhcCcccceeeeccCCccEEEEEec--------CCcEEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEE
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLP--------CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCI  530 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~  530 (570)
                      ...++|.+.+.||+|+||.||++...        .+..||||++... .......+.+|+.++.++ +||||+++++++.
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  145 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT  145 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence            34567889999999999999999842        2357999999643 334456799999999999 9999999999999


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ..+..++||||+++|+|.++|...+
T Consensus       146 ~~~~~~lv~e~~~~g~L~~~l~~~~  170 (382)
T 3tt0_A          146 QDGPLYVIVEYASKGNLREYLQARR  170 (382)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhc
Confidence            9899999999999999999998754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.12  E-value=1.1e-10  Score=113.51  Aligned_cols=105  Identities=22%  Similarity=0.329  Sum_probs=84.9

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEe--CCeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCID--SEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~--~~~~~l  537 (570)
                      .++|++.+.||+|+||.||++.. .+++.||+|.+...  .....+.+.+|+.++.+++||||+++++.+..  ....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35688889999999999999995 46889999999643  23345679999999999999999999998865  457899


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||||+++|+|.+++.........+++.+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  114 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVL  114 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHH
Confidence            999999999999998654444445555443

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.11  E-value=2.1e-10  Score=117.26  Aligned_cols=92  Identities=16%  Similarity=0.262  Sum_probs=80.7

Q ss_pred             hcCcccceeeecc--CCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNKLGEG--GYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G--~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..+|++.+.||+|  +||.||++.. .+++.||||++...  .....+.+.+|+.++.+++||||+++++++......++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3568889999999  9999999995 46899999999643  23334678899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      |||||++|+|.+++...
T Consensus       104 v~e~~~~~~L~~~l~~~  120 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTH  120 (389)
T ss_dssp             EEECCTTCBHHHHHHHT
T ss_pred             EEEccCCCCHHHHHhhh
Confidence            99999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.11  E-value=1.5e-10  Score=114.40  Aligned_cols=102  Identities=23%  Similarity=0.338  Sum_probs=82.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|++.+.||+|+||.||++.. .+++.||+|.+...   .......+.+|+.++.+++||||+++++.+...+..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            4688899999999999999994 56889999999642   2334567999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCCCcccccHhh
Q 008332          540 EYMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                      ||+++|+|.+++.........++..+
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~  137 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERT  137 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHH
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHH
Confidence            99999999999975332333344443

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.11  E-value=4.9e-11  Score=122.48  Aligned_cols=97  Identities=22%  Similarity=0.255  Sum_probs=81.3

Q ss_pred             HHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCC
Q 008332          458 DIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE  533 (570)
Q Consensus       458 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~  533 (570)
                      ++....++|.+.+.||+|+||.||++.. .+++.+|+|++....   ......+.+|+.++..++||||+++++++....
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            3444567799999999999999999995 458899999985311   122235889999999999999999999999999


Q ss_pred             eeEEEEecCCCCCHHHHHhcC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..++||||+++|+|.++|++.
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~~  163 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSNY  163 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHHC
T ss_pred             EEEEEEeCCCCCcHHHHHHcC
Confidence            999999999999999999764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.11  E-value=9.6e-11  Score=116.62  Aligned_cols=91  Identities=26%  Similarity=0.353  Sum_probs=77.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|++.+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++..++||||+++++++......++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            5688899999999999999995 468899999985332 22345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        87 ~~~~~L~~~l~~~   99 (323)
T 3tki_A           87 CSGGELFDRIEPD   99 (323)
T ss_dssp             CTTEEGGGGSBTT
T ss_pred             CCCCcHHHHHhhc
Confidence            9999999998753

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.11  E-value=2e-10  Score=114.80  Aligned_cols=95  Identities=24%  Similarity=0.443  Sum_probs=80.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEe--------cCCcEEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL--------PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~--------~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      ..++|.+.+.||+|+||.||++..        ..+..||+|.+... .....+.+.+|+.++.++ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            456788999999999999999985        24678999999643 334456799999999999 89999999999998


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      ....++||||+++|+|.++|...+.
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~  137 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRP  137 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSC
T ss_pred             CCceEEEEECCCCCcHHHHHHHhcc
Confidence            8999999999999999999987543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.11  E-value=2e-10  Score=116.27  Aligned_cols=92  Identities=20%  Similarity=0.389  Sum_probs=80.5

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+....  ....+.+.+|+.++.+++||||+++++++......++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45688899999999999999994 568899999996432  334567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus       108 e~~~gg~L~~~l~~~  122 (362)
T 2bdw_A          108 DLVTGGELFEDIVAR  122 (362)
T ss_dssp             CCCCSCBHHHHHTTC
T ss_pred             ecCCCCCHHHHHHHc
Confidence            999999999999754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.10  E-value=1.4e-10  Score=115.30  Aligned_cols=91  Identities=21%  Similarity=0.257  Sum_probs=76.6

Q ss_pred             HhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC----eeEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE----ERML  537 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~----~~~l  537 (570)
                      ...+|++.+.||+|+||.||+|... ++.||||++.... .....+.+|+.++.+++||||+++++++....    ..++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            3467889999999999999999876 8899999995432 23345677899999999999999999998754    4699


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.++|+..
T Consensus       100 v~e~~~~g~L~~~l~~~  116 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKAN  116 (322)
T ss_dssp             EEECCTTCBHHHHHHHC
T ss_pred             EEecCCCCCHHHHHHhc
Confidence            99999999999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.10  E-value=2.4e-10  Score=110.18  Aligned_cols=92  Identities=24%  Similarity=0.447  Sum_probs=81.5

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .++|++.+.||+|+||.||++...+++.||+|.+..... ..+.+.+|+.++.+++||||+++++++......++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            456888899999999999999987788999999965432 3467999999999999999999999999888999999999


Q ss_pred             CCCCHHHHHhcCC
Q 008332          543 PNKSLDCYLFGLS  555 (570)
Q Consensus       543 ~~GsL~~~L~~~~  555 (570)
                      ++|+|.+++...+
T Consensus        86 ~~~~L~~~~~~~~   98 (267)
T 3t9t_A           86 EHGCLSDYLRTQR   98 (267)
T ss_dssp             TTCBHHHHHHHTT
T ss_pred             CCCcHHHHHhhCc
Confidence            9999999998653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.10  E-value=2.2e-10  Score=115.89  Aligned_cols=91  Identities=20%  Similarity=0.310  Sum_probs=79.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+..... ..+.+.+|+.++.+++||||+++++++......++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            45688999999999999999995 4688999999964332 235688999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        98 ~~~~~L~~~l~~~  110 (361)
T 3uc3_A           98 ASGGELYERICNA  110 (361)
T ss_dssp             CCSCBHHHHHHHH
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999999753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.10  E-value=1.4e-10  Score=116.37  Aligned_cols=94  Identities=24%  Similarity=0.363  Sum_probs=81.3

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-----CcccHHHHHHHHHHHHccCCCCccceeEEEEeC
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-----STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS  532 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-----~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~  532 (570)
                      +.....+|.+.+.||+|+||.||++.. .++..||+|.+...     .....+.+.+|+.++.+++||||+++++++...
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            345566799999999999999999995 56789999998532     334557899999999999999999999999999


Q ss_pred             CeeEEEEecCCCCCHHHHHh
Q 008332          533 EERMLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~  552 (570)
                      ...++||||+++|+|.++|.
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEE
T ss_pred             CeEEEEEeCCCCCcHHHHHH
Confidence            99999999999999999996

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.10  E-value=1.7e-10  Score=114.16  Aligned_cols=97  Identities=26%  Similarity=0.396  Sum_probs=82.6

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCCc-ccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTST-QGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~~-~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      ....++|.+.+.||+|+||.||++..      ..++.||+|.++.... ...+.+.+|+.++.++ +||||+++++++..
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   98 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence            34456788999999999999999984      3467899999974432 3456799999999999 99999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      .+..++||||+++|+|.+++...+.
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~  123 (313)
T 1t46_A           99 GGPTLVITEYCCYGDLLNFLRRKRD  123 (313)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTT
T ss_pred             CCCcEEEEecCCCCCHHHHHHhccc
Confidence            9999999999999999999987543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.09  E-value=8.3e-11  Score=114.87  Aligned_cols=94  Identities=34%  Similarity=0.559  Sum_probs=81.8

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      +....+|++.+.||+|+||.||++... .+..||+|.+... ....+.+.+|+.++.+++||||+++++++......++|
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v   87 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   87 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence            335567888999999999999999954 4788999999643 33457899999999999999999999999988899999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.+++...
T Consensus        88 ~e~~~~~~L~~~~~~~  103 (288)
T 3kfa_A           88 TEFMTYGNLLDYLREC  103 (288)
T ss_dssp             EECCTTEEHHHHHHHC
T ss_pred             EEcCCCCcHHHHHHhc
Confidence            9999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.09  E-value=1e-10  Score=117.54  Aligned_cols=98  Identities=28%  Similarity=0.398  Sum_probs=81.2

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEE
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCI  530 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~  530 (570)
                      ++...++|.+.+.||+|+||.||++..      ..+..||+|.+... .....+.+.+|+.++.++ +||||+++++++.
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            344567899999999999999999994      23558999999643 223346799999999999 8999999999999


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcCCC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      ..+..++||||+++|+|.++|...+.
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~~~  145 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSKRE  145 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTT
T ss_pred             eCCccEEEEecCCCCcHHHHHhhccc
Confidence            99999999999999999999987543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.09  E-value=2.4e-10  Score=112.40  Aligned_cols=93  Identities=25%  Similarity=0.498  Sum_probs=79.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ..++|++.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            346788899999999999999995 4588999999976655667889999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus        97 ~~~~~~l~~~~~~~  110 (302)
T 2j7t_A           97 FCPGGAVDAIMLEL  110 (302)
T ss_dssp             CCTTEEHHHHHHHH
T ss_pred             eCCCCcHHHHHHhh
Confidence            99999999998753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.09  E-value=2.2e-10  Score=115.30  Aligned_cols=91  Identities=22%  Similarity=0.275  Sum_probs=73.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ..++|.+.+.||+|+||.||+|... +++.||+|.+....  ..+.+.+|+.++.+++||||+++++++......++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            3466888999999999999999954 57899999996432  33568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus       129 ~~~~~~L~~~l~~~  142 (349)
T 2w4o_A          129 LVTGGELFDRIVEK  142 (349)
T ss_dssp             CCCSCBHHHHHTTC
T ss_pred             eCCCCCHHHHHHhc
Confidence            99999999999764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.08  E-value=3.7e-10  Score=111.83  Aligned_cols=91  Identities=21%  Similarity=0.280  Sum_probs=79.2

Q ss_pred             cCccc-ceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSI-RNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~-~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +.|.+ .+.||+|+||.||++. ..+++.||||.+..........+.+|+.++.++ +||||+++++++...+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            34665 3789999999999999 456899999999765555667899999999985 79999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus        92 ~~~~~~L~~~l~~~  105 (316)
T 2ac3_A           92 KMRGGSILSHIHKR  105 (316)
T ss_dssp             CCTTCBHHHHHHHH
T ss_pred             cCCCCcHHHHHhcc
Confidence            99999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.08  E-value=2.3e-10  Score=113.99  Aligned_cols=94  Identities=29%  Similarity=0.528  Sum_probs=78.2

Q ss_pred             hcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      ..+|.+.+.||+|+||.||++..      ..++.||||.+... .......+.+|+.++.+++||||+++++++......
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            45688899999999999999983      34678999999643 334456799999999999999999999999988899


Q ss_pred             EEEEecCCCCCHHHHHhcCCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      ++||||+++|+|.++|...+.
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~  129 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRP  129 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSC
T ss_pred             EEEEecCCCCcHHHHHHhhcc
Confidence            999999999999999997543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.08  E-value=2.7e-10  Score=113.56  Aligned_cols=91  Identities=22%  Similarity=0.411  Sum_probs=79.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-----cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEe--CCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID--SEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~--~~~~~  536 (570)
                      ++|++.+.||+|+||.||++..     ..++.||||.+........+.+.+|+.++.+++||||+++++++..  ....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5688899999999999999984     4578999999976666666789999999999999999999999874  35689


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +||||+++|+|.+++...
T Consensus       103 lv~e~~~~~~L~~~l~~~  120 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRH  120 (327)
T ss_dssp             EEEECCTTCBHHHHHHHH
T ss_pred             EEEeecCCCCHHHHHHhc
Confidence            999999999999999853

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.08  E-value=8.6e-11  Score=120.71  Aligned_cols=98  Identities=18%  Similarity=0.214  Sum_probs=82.4

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeC
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS  532 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~  532 (570)
                      .++....++|.+.+.||+|+||.||++.. .+++.||+|++....   ....+.+.+|..++.+++||||+++++++...
T Consensus        54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  133 (412)
T 2vd5_A           54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE  133 (412)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence            33444567899999999999999999995 568999999995321   12223588999999999999999999999999


Q ss_pred             CeeEEEEecCCCCCHHHHHhcC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      +..++||||+++|+|.++|.+.
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~  155 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKF  155 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHH
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc
Confidence            9999999999999999999853

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.08  E-value=2e-10  Score=117.81  Aligned_cols=91  Identities=23%  Similarity=0.391  Sum_probs=78.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCC--eeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE--ERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv~  539 (570)
                      .+|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++.+++||||+++++++....  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            5688899999999999999995 458899999996432 344577899999999999999999999998765  679999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|...
T Consensus        89 e~~~~g~L~~~l~~~  103 (396)
T 4eut_A           89 EFCPCGSLYTVLEEP  103 (396)
T ss_dssp             CCCTTEEHHHHTTSG
T ss_pred             ecCCCCCHHHHHHhh
Confidence            999999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.08  E-value=2.5e-10  Score=113.25  Aligned_cols=91  Identities=25%  Similarity=0.342  Sum_probs=79.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|++.+.||+|+||.||++.. .+|+.||+|.++...   ....+.+.+|..++..++||||+++++.+......++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            5688889999999999999995 468999999986321   234567889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|...
T Consensus        86 e~~~gg~L~~~l~~~  100 (318)
T 1fot_A           86 DYIEGGELFSLLRKS  100 (318)
T ss_dssp             CCCCSCBHHHHHHHT
T ss_pred             eCCCCCCHHHHHHHc
Confidence            999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.08  E-value=2.3e-10  Score=114.13  Aligned_cols=92  Identities=25%  Similarity=0.343  Sum_probs=74.5

Q ss_pred             hcCcccceeeeccCCccEEEEEe----cCCcEEEEEEecCCC----cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTS----TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~----~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      .++|++.+.||+|+||.||++..    .+++.+|+|.++...    ......+.+|+.++.+++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            45688899999999999999985    468899999996432    2234568899999999999999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++||||+++|+|.++|...
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~  115 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE  115 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHhC
Confidence            99999999999999999753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.08  E-value=1.2e-10  Score=113.26  Aligned_cols=92  Identities=33%  Similarity=0.464  Sum_probs=79.5

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      +...++|++.+.||+|+||.||++....+..||+|.+.... ...+.|.+|+.++.+++||||+++++++. .+..++||
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   86 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT   86 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence            34456788999999999999999998878899999996433 34578999999999999999999999875 55689999


Q ss_pred             ecCCCCCHHHHHhc
Q 008332          540 EYMPNKSLDCYLFG  553 (570)
Q Consensus       540 e~~~~GsL~~~L~~  553 (570)
                      ||+++|+|.+++..
T Consensus        87 e~~~~~~L~~~l~~  100 (279)
T 1qpc_A           87 EYMENGSLVDFLKT  100 (279)
T ss_dssp             ECCTTCBHHHHTTS
T ss_pred             ecCCCCCHHHHHhc
Confidence            99999999999975

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.07  E-value=5.7e-10  Score=110.72  Aligned_cols=89  Identities=33%  Similarity=0.461  Sum_probs=76.2

Q ss_pred             cccceeeeccCCccEEEEEe-----cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERML  537 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  537 (570)
                      |++.+.||+|+||.||++.+     .+++.||||++.... ....+.+.+|+.++.+++||||+++++++...  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            47889999999999999874     257899999997433 34456799999999999999999999999884  57899


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.+++...
T Consensus       113 v~e~~~~~~L~~~l~~~  129 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH  129 (318)
T ss_dssp             EECCCTTCBHHHHGGGS
T ss_pred             EEecccCCcHHHHHhhC
Confidence            99999999999999764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.07  E-value=2.9e-10  Score=120.48  Aligned_cols=104  Identities=19%  Similarity=0.316  Sum_probs=86.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|...++||+|+||.||++.. .+|+.||+|++....   ......+.+|+.++.+++||||+++.+++......++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            4578889999999999999995 468999999995321   233567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          540 EYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||+++|+|.++|.........++..+++
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~  292 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAI  292 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHH
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHH
Confidence            9999999999998765444455555443

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.07  E-value=4e-10  Score=110.83  Aligned_cols=91  Identities=30%  Similarity=0.462  Sum_probs=76.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-----cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeC--Cee
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EER  535 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~  535 (570)
                      ..|+..+.||+|+||.||++.+     ..++.||+|.+... .....+.+.+|+.++.+++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4578889999999999999983     45789999999743 334557899999999999999999999999876  568


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++||||+++|+|.+++...
T Consensus       101 ~lv~e~~~~~~L~~~l~~~  119 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKN  119 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhc
Confidence            9999999999999999654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.07  E-value=3.7e-10  Score=112.20  Aligned_cols=91  Identities=24%  Similarity=0.293  Sum_probs=79.6

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc------ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4588889999999999999995 4688999999864321      13578999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +||||+++|+|.+++...
T Consensus        92 lv~e~~~~~~L~~~l~~~  109 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK  109 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC
T ss_pred             EEEEcCCCCcHHHHHHhc
Confidence            999999999999999853

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.07  E-value=4.2e-10  Score=112.15  Aligned_cols=92  Identities=28%  Similarity=0.473  Sum_probs=76.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcE--EEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEV--IAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~--vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++|++.+.||+|+||.||++.. .++..  +++|.+... .....+.+.+|+.++.++ +||||+++++++...+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            5688889999999999999994 45654  499988643 233445799999999999 899999999999999999999


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      |||+++|+|.+++...+
T Consensus       105 ~e~~~~~~L~~~l~~~~  121 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSR  121 (327)
T ss_dssp             ECCCTTCBHHHHHHTTC
T ss_pred             EecCCCCCHHHHHHhcc
Confidence            99999999999998754

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.07  E-value=3.1e-10  Score=111.83  Aligned_cols=92  Identities=17%  Similarity=0.285  Sum_probs=77.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ..+|.+.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++.+++||||+++++++......++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            34688889999999999999995 46889999999754444456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        88 ~~~~~L~~~l~~~  100 (304)
T 2jam_A           88 VSGGELFDRILER  100 (304)
T ss_dssp             CCSCBHHHHHHHH
T ss_pred             CCCccHHHHHHHc
Confidence            9999999998753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.07  E-value=3.2e-10  Score=113.00  Aligned_cols=93  Identities=32%  Similarity=0.559  Sum_probs=79.5

Q ss_pred             hcCcccceeeeccCCccEEEEEe-----cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC--ee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-----PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE--ER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~--~~  535 (570)
                      ..+|++.+.||+|+||.||++..     .+++.||+|.+........+.|.+|+.++.+++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35588889999999999999984     357899999997665556678999999999999999999999987654  68


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++|+||+++|+|.++|...+
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~  139 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHK  139 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHST
T ss_pred             EEEEECCCCCCHHHHHHhcc
Confidence            99999999999999998653

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.07  E-value=2.9e-10  Score=115.68  Aligned_cols=91  Identities=19%  Similarity=0.272  Sum_probs=79.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|.+.+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++.+++||||+++++++......++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5688899999999999999994 55889999998532   2234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus        95 e~~~gg~L~~~l~~~  109 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN  109 (384)
T ss_dssp             CCCTTEEHHHHHHTT
T ss_pred             ecCCCCcHHHHHHhc
Confidence            999999999999863

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.06  E-value=4.3e-10  Score=109.45  Aligned_cols=90  Identities=23%  Similarity=0.336  Sum_probs=78.9

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc------ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ++|.+.+.||+|+||.||++... +++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            45788899999999999999954 688999999853221      23678999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhc
Q 008332          537 LIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~  553 (570)
                      +||||+++++|.+++.+
T Consensus        85 lv~e~~~~~~L~~~l~~  101 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE  101 (283)
T ss_dssp             EEEECCCSCBHHHHHHH
T ss_pred             EEEeecCCCcHHHHHHh
Confidence            99999999999999975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.06  E-value=2.7e-10  Score=114.24  Aligned_cols=94  Identities=20%  Similarity=0.295  Sum_probs=79.2

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~  534 (570)
                      ....++|.+.+.||+|+||.||++.. .+++.||+|+++...   ......+..|..++..+ +||||+++++++...+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            34557799999999999999999995 468899999996421   23456688899999887 99999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhc
Q 008332          535 RMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~  553 (570)
                      .++||||+++|+|.++|..
T Consensus        93 ~~lv~E~~~gg~L~~~l~~  111 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQS  111 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHH
Confidence            9999999999999999985

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.06  E-value=2.1e-10  Score=113.64  Aligned_cols=102  Identities=23%  Similarity=0.414  Sum_probs=84.4

Q ss_pred             ChHHHHHHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCcccee
Q 008332          455 SLADIEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVL  526 (570)
Q Consensus       455 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~  526 (570)
                      ....+....++|.+.+.||+|+||.||++..      .+++.||||.+.... ....+.+.+|+.++.++ +||||++++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            4455566678899999999999999999983      345789999997543 23446799999999999 799999999


Q ss_pred             EEEEeCC-eeEEEEecCCCCCHHHHHhcCCC
Q 008332          527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       527 g~~~~~~-~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      +.+...+ ..++|+||+++|+|.+++.....
T Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  128 (316)
T 2xir_A           98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRN  128 (316)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHTCTT
T ss_pred             EEEecCCCceEEEEEcCCCCcHHHHHHhccc
Confidence            9987754 58999999999999999997654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.05  E-value=4e-10  Score=111.46  Aligned_cols=91  Identities=26%  Similarity=0.402  Sum_probs=77.8

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|++.+.||+|+||.||++...+++.||+|++....  ......+.+|+.++.+++||||+++++++......++||||
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  100 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF  100 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence            5688899999999999999998779999999996432  22346789999999999999999999999988999999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      ++ |+|.+++...+
T Consensus       101 ~~-~~l~~~~~~~~  113 (311)
T 3niz_A          101 ME-KDLKKVLDENK  113 (311)
T ss_dssp             CS-EEHHHHHHTCT
T ss_pred             CC-CCHHHHHHhcc
Confidence            98 58999988644

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.05  E-value=3.3e-10  Score=114.06  Aligned_cols=93  Identities=19%  Similarity=0.281  Sum_probs=79.2

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  536 (570)
                      ..++|.+.+.||+|+||.||++.. .+++.||+|+++..   .......+.+|..++..+ +||||+++++++......+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            346799999999999999999995 56889999999632   223446688999999988 7999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +||||+++|+|.++|...
T Consensus       101 lv~E~~~gg~L~~~l~~~  118 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKS  118 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHc
Confidence            999999999999999754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.05  E-value=1.3e-10  Score=116.24  Aligned_cols=96  Identities=27%  Similarity=0.396  Sum_probs=81.4

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEec-CC-----cEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEE
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLP-CG-----EVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCI  530 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~-----~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~  530 (570)
                      ++...++|.+.+.||+|+||.||++... .+     ..||+|.+.... ....+.+.+|+.++.++ +||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  120 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT  120 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            3445678999999999999999999843 22     479999996443 33456799999999999 8999999999999


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .....++||||+++|+|.++|...
T Consensus       121 ~~~~~~lv~e~~~~g~L~~~l~~~  144 (333)
T 2i1m_A          121 HGGPVLVITEYCCYGDLLNFLRRK  144 (333)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHH
T ss_pred             cCCceEEEEecCCCCcHHHHHHHh
Confidence            889999999999999999999853

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.05  E-value=3.1e-10  Score=117.81  Aligned_cols=92  Identities=18%  Similarity=0.341  Sum_probs=78.4

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .++|.+.+.||+|+||.||++. ..+++.+|+|.+....  ....+.+.+|+.++.+++||||+++++++......++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            4568889999999999999998 4568899999986433  233457899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus        90 E~~~gg~L~~~i~~~  104 (444)
T 3soa_A           90 DLVTGGELFEDIVAR  104 (444)
T ss_dssp             CCCBCCBHHHHHHHC
T ss_pred             EeCCCCCHHHHHHHc
Confidence            999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.05  E-value=4.2e-10  Score=112.97  Aligned_cols=91  Identities=16%  Similarity=0.234  Sum_probs=78.4

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .+|.+.+.||+|+||.||++.. .+++.||+|++....   ....+.+.+|..++.++ +||||+++++++......++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            4688889999999999999995 458899999996432   23345688999999988 899999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.+++...
T Consensus        89 ~e~~~gg~L~~~l~~~  104 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ  104 (345)
T ss_dssp             ECCCCSCBHHHHHHHH
T ss_pred             EeCCCCCcHHHHHHHc
Confidence            9999999999999753

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.05  E-value=7.8e-10  Score=108.82  Aligned_cols=91  Identities=22%  Similarity=0.380  Sum_probs=80.2

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .+.|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++.+++||||+++++.+......++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35688889999999999999984 568899999996432 3456789999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhc
Q 008332          541 YMPNKSLDCYLFG  553 (570)
Q Consensus       541 ~~~~GsL~~~L~~  553 (570)
                      |+++|+|.+++..
T Consensus       101 ~~~~~~L~~~~~~  113 (303)
T 3a7i_A          101 YLGGGSALDLLEP  113 (303)
T ss_dssp             CCTTEEHHHHHTT
T ss_pred             eCCCCcHHHHHhc
Confidence            9999999999974

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.04  E-value=4.2e-10  Score=108.78  Aligned_cols=90  Identities=29%  Similarity=0.536  Sum_probs=74.9

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCC----cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS----TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~----~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ..+|++.+.||+|+||.||++... ++.+|||.++...    ....+.+.+|+.++..++||||+++++++...+..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            356888999999999999999975 8899999986432    22346799999999999999999999999998999999


Q ss_pred             EecCCCCCHHHHHhc
Q 008332          539 YEYMPNKSLDCYLFG  553 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~  553 (570)
                      |||+++|+|.+++.+
T Consensus        85 ~e~~~~~~L~~~~~~   99 (271)
T 3dtc_A           85 MEFARGGPLNRVLSG   99 (271)
T ss_dssp             EECCTTEEHHHHHTS
T ss_pred             EEcCCCCCHHHHhhc
Confidence            999999999999964

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.04  E-value=6.5e-10  Score=108.82  Aligned_cols=88  Identities=27%  Similarity=0.386  Sum_probs=76.4

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCCC
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNK  545 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  545 (570)
                      ....+||+|+||.||+|.. .+++.||+|.+........+.+.+|+.++..++||||+++++++......++||||+++|
T Consensus        25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             SSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             CCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            3346899999999999994 568899999997655555678999999999999999999999999999999999999999


Q ss_pred             CHHHHHhcC
Q 008332          546 SLDCYLFGL  554 (570)
Q Consensus       546 sL~~~L~~~  554 (570)
                      +|.+++...
T Consensus       105 ~L~~~l~~~  113 (295)
T 2clq_A          105 SLSALLRSK  113 (295)
T ss_dssp             EHHHHHHHT
T ss_pred             CHHHHHHhh
Confidence            999999865

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.04  E-value=3.8e-10  Score=113.52  Aligned_cols=91  Identities=21%  Similarity=0.256  Sum_probs=79.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.+...   .....+.+.+|+.++..++||||+++++.+......++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            4688889999999999999995 46889999998532   1234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|...
T Consensus       121 e~~~gg~L~~~l~~~  135 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI  135 (350)
T ss_dssp             ECCTTCBHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHc
Confidence            999999999999853

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.04  E-value=3.5e-10  Score=118.30  Aligned_cols=91  Identities=20%  Similarity=0.347  Sum_probs=79.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|.+.+.||+|+||.||+|.. .+|+.||||.+....   ......+.+|+.++..++||||+++++++......++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            5688889999999999999995 468999999995321   223467899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|...
T Consensus        96 E~~~gg~L~~~l~~~  110 (476)
T 2y94_A           96 EYVSGGELFDYICKN  110 (476)
T ss_dssp             ECCSSEEHHHHTTSS
T ss_pred             eCCCCCcHHHHHHhc
Confidence            999999999999753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.04  E-value=1.4e-10  Score=115.41  Aligned_cols=95  Identities=24%  Similarity=0.475  Sum_probs=72.2

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecC-Cc---EEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPC-GE---VIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE  533 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~-~~---~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~  533 (570)
                      ....++|.+.+.||+|+||.||++.... +.   .||||.++..  .....+.|.+|+.++.+++||||+++++++....
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            3445678999999999999999998533 32   7999999643  3344578999999999999999999999998776


Q ss_pred             ee------EEEEecCCCCCHHHHHhcC
Q 008332          534 ER------MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~------~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..      ++|+||+++|+|.+++...
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~  125 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLAS  125 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHH
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhh
Confidence            54      9999999999999999754

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.04  E-value=2.8e-10  Score=112.90  Aligned_cols=91  Identities=27%  Similarity=0.462  Sum_probs=65.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ..+|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            35678889999999999999984 568899999986432 2334678899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |++ |+|.+++...
T Consensus        84 ~~~-~~L~~~l~~~   96 (317)
T 2pmi_A           84 FMD-NDLKKYMDSR   96 (317)
T ss_dssp             CCC-CBHHHHHHHH
T ss_pred             ecC-CCHHHHHHhc
Confidence            998 6999998753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.04  E-value=4.5e-10  Score=113.56  Aligned_cols=91  Identities=23%  Similarity=0.240  Sum_probs=80.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.+... .....+.+.+|+.++.+++||||+++++++......++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            4688889999999999999995 46889999999643 333456799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus       113 ~~~~~L~~~l~~~  125 (360)
T 3eqc_A          113 MDGGSLDQVLKKA  125 (360)
T ss_dssp             CTTCBHHHHHHHH
T ss_pred             CCCCCHHHHHHHc
Confidence            9999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.04  E-value=6.4e-10  Score=108.29  Aligned_cols=92  Identities=21%  Similarity=0.397  Sum_probs=80.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .++|++.+.||+|+||.||++.. .+++.||+|.+...  .....+.+.+|+.++.+++||||+++++++......++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            35788899999999999999994 55889999998632  3334567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus        85 e~~~~~~l~~~~~~~   99 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR   99 (284)
T ss_dssp             CCCCSCBHHHHHHHH
T ss_pred             ecCCCCCHHHHHHhc
Confidence            999999999998753

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.04  E-value=6.1e-10  Score=120.59  Aligned_cols=92  Identities=27%  Similarity=0.468  Sum_probs=76.1

Q ss_pred             hcCcccce-eeeccCCccEEEEEec---CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRN-KLGEGGYGPVYKGVLP---CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~-~lg~G~fg~V~~~~~~---~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ..++.+.+ .||+|+||.||+|...   .+..||||.++... ....+.|.+|+.+|.+++||||++++++|.. +..++
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l  412 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML  412 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence            34455445 7999999999999853   45679999997543 3456789999999999999999999999865 66899


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      ||||+++|+|.++|...+
T Consensus       413 v~E~~~~g~L~~~l~~~~  430 (613)
T 2ozo_A          413 VMEMAGGGPLHKFLVGKR  430 (613)
T ss_dssp             EEECCTTCBHHHHHTTCT
T ss_pred             EEEeCCCCcHHHHHhhcc
Confidence            999999999999998643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.04  E-value=1.9e-10  Score=114.25  Aligned_cols=97  Identities=27%  Similarity=0.494  Sum_probs=82.6

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEE
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFC  529 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~  529 (570)
                      .+++...++|.+.+.||+|+||.||+|...      .++.||+|.+.... ......|.+|+.++.+++||||+++++++
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            344556678999999999999999999843      36789999996433 33445799999999999999999999999


Q ss_pred             EeCCeeEEEEecCCCCCHHHHHhc
Q 008332          530 IDSEERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       530 ~~~~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ......++||||+++|+|.++|..
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~  121 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRS  121 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHH
Confidence            888899999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.03  E-value=1.6e-10  Score=114.24  Aligned_cols=92  Identities=22%  Similarity=0.273  Sum_probs=77.5

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCe----
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE----  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~----  534 (570)
                      .++|++.+.||+|+||.||++. ..+++.||+|+++....   .....|.+|+.++.+++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            3568889999999999999999 46688999999964322   234578999999999999999999999876543    


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++||||+++|+|.++++..
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~  110 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE  110 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH
T ss_pred             cEEEEecCCCCCHHHHHHhc
Confidence            49999999999999999753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.03  E-value=6.7e-10  Score=117.64  Aligned_cols=92  Identities=26%  Similarity=0.296  Sum_probs=77.2

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc-------------ccHHHHHHHHHHHHccCCCCccceeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST-------------QGFEEFKNEVMLTAKLQHVNLIRVLGF  528 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~-------------~~~~~f~~e~~~l~~l~h~niv~l~g~  528 (570)
                      ..+|.+.+.||+|+||.||+|.. .+++.+|+|.+.....             ...+.+.+|+.++.+++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            46788899999999999999995 4578999999864221             234678999999999999999999999


Q ss_pred             EEeCCeeEEEEecCCCCCHHHHHhcC
Q 008332          529 CIDSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       529 ~~~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      +......++|||||++|+|.+++...
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~  140 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINR  140 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHc
Confidence            99999999999999999999999753

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.03  E-value=5.6e-10  Score=111.56  Aligned_cols=92  Identities=29%  Similarity=0.452  Sum_probs=78.4

Q ss_pred             hcCcccceeeeccCCccEEEEEecC-----CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~-----~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ..+|...+.||+|+||.||+|....     +..||+|.++... ......|.+|+.++.+++||||+++++++......+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            4567888999999999999998532     2369999996433 334567999999999999999999999998888999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +||||+++|+|.+++...
T Consensus       123 lv~e~~~~~~L~~~l~~~  140 (333)
T 1mqb_A          123 IITEYMENGALDKFLREK  140 (333)
T ss_dssp             EEEECCTTEEHHHHHHHT
T ss_pred             EEEeCCCCCcHHHHHHhC
Confidence            999999999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.03  E-value=4e-10  Score=111.51  Aligned_cols=111  Identities=29%  Similarity=0.451  Sum_probs=81.8

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEec----CCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEE
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCI  530 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~  530 (570)
                      .++.....+|.+.+.||+|+||.||+|...    .+..||+|.++..  .....+.+.+|+.++.+++||||+++++++.
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~  106 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI  106 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence            334455677899999999999999999853    3458999998643  2334567999999999999999999999988


Q ss_pred             eCC-----eeEEEEecCCCCCHHHHHhcCCC--CcccccHhhhh
Q 008332          531 DSE-----ERMLIYEYMPNKSLDCYLFGLSH--QKTYFGLEKTC  567 (570)
Q Consensus       531 ~~~-----~~~lv~e~~~~GsL~~~L~~~~~--~~~~~~~~~~~  567 (570)
                      ...     ..++|+||+++|+|.+++...+.  ....+++.+++
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  150 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL  150 (313)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHH
T ss_pred             eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHH
Confidence            654     35999999999999999964432  23345555443

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.02  E-value=9.1e-10  Score=107.45  Aligned_cols=91  Identities=27%  Similarity=0.489  Sum_probs=76.1

Q ss_pred             hcCcccce-eeeccCCccEEEEEec---CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRN-KLGEGGYGPVYKGVLP---CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~-~lg~G~fg~V~~~~~~---~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+++.+.+ .||+|+||.||+|...   .+..||+|.++... ....+.+.+|+.++.+++||||+++++++ ..+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            34455555 9999999999999843   57789999997543 34456799999999999999999999998 5667899


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.+++...
T Consensus        87 v~e~~~~~~L~~~l~~~  103 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGK  103 (287)
T ss_dssp             EEECCTTEEHHHHHTTC
T ss_pred             EEEeCCCCCHHHHHHhC
Confidence            99999999999999754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.02  E-value=7.9e-10  Score=109.20  Aligned_cols=91  Identities=25%  Similarity=0.366  Sum_probs=79.1

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|++.+.||+|+||.||++.. .+++.||+|.+.....  ...+.+.+|+.++.+++||||+++++++......++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            4688889999999999999995 4588999999864332  234578899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++++|.+++...
T Consensus        83 ~~~~~~l~~~~~~~   96 (311)
T 4agu_A           83 YCDHTVLHELDRYQ   96 (311)
T ss_dssp             CCSEEHHHHHHHTS
T ss_pred             eCCCchHHHHHhhh
Confidence            99999999998754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.02  E-value=3.9e-10  Score=115.14  Aligned_cols=92  Identities=15%  Similarity=0.225  Sum_probs=77.3

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  537 (570)
                      .++|.+.++||+|+||.||++.. .+++.+|+|+++...   ......+.+|..++.++ +||||+++++++......++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            45688999999999999999995 457899999996432   22234578899999887 89999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.++|...
T Consensus       131 V~E~~~gg~L~~~l~~~  147 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQ  147 (396)
T ss_dssp             EEECCTTCBHHHHHHHH
T ss_pred             EEEcCCCCcHHHHHHHc
Confidence            99999999999999853

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.02  E-value=4.6e-10  Score=110.79  Aligned_cols=87  Identities=23%  Similarity=0.452  Sum_probs=75.4

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      .+|++.+.||+|+||.||++... ++.||+|.+...  ...+.|.+|+.++.+++||||+++++.+.  +..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            45788899999999999999876 788999998533  34567999999999999999999999875  45899999999


Q ss_pred             CCCHHHHHhcCC
Q 008332          544 NKSLDCYLFGLS  555 (570)
Q Consensus       544 ~GsL~~~L~~~~  555 (570)
                      +|+|.++|....
T Consensus        83 ~~~L~~~l~~~~   94 (307)
T 2eva_A           83 GGSLYNVLHGAE   94 (307)
T ss_dssp             TCBHHHHHHCSS
T ss_pred             CCCHHHHHhccC
Confidence            999999998643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.02  E-value=6e-10  Score=108.85  Aligned_cols=91  Identities=25%  Similarity=0.373  Sum_probs=78.8

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|++.+.||+|+||.||++....++.+|+|.+.....  .....+.+|+.++.+++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            46788899999999999999987799999999864322  2346788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      +++ +|.+++....
T Consensus        82 ~~~-~l~~~~~~~~   94 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCE   94 (288)
T ss_dssp             CSE-EHHHHHHTST
T ss_pred             cCC-CHHHHHHhcc
Confidence            985 9999998643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.02  E-value=7.3e-10  Score=116.77  Aligned_cols=91  Identities=26%  Similarity=0.307  Sum_probs=80.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||||++....   ......+.+|+.++.+++||||+++++++......++|+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            4588889999999999999995 468899999985332   334678999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus       106 e~~~~~~L~~~~~~~  120 (484)
T 3nyv_A          106 EVYTGGELFDEIISR  120 (484)
T ss_dssp             CCCCSCBHHHHHHTC
T ss_pred             ecCCCCCHHHHHHhc
Confidence            999999999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.02  E-value=5.7e-10  Score=108.29  Aligned_cols=91  Identities=26%  Similarity=0.454  Sum_probs=79.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.+....   ....+.+.+|+.++.+++||||+++++++......++|+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            4688889999999999999995 568999999985321   223467899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus        91 e~~~~~~L~~~l~~~  105 (278)
T 3cok_A           91 EMCHNGEMNRYLKNR  105 (278)
T ss_dssp             ECCTTEEHHHHHHTC
T ss_pred             ecCCCCcHHHHHhhc
Confidence            999999999999864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.01  E-value=6.5e-10  Score=118.21  Aligned_cols=93  Identities=22%  Similarity=0.308  Sum_probs=80.3

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|...++||+|+||.||++.. .+|+.||+|.+...   .......+.+|+.+|.+++||||+++++++......++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            35688889999999999999995 46899999998532   123346688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      |||+++|+|.++|....
T Consensus       263 mEy~~gg~L~~~l~~~~  279 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMG  279 (576)
T ss_dssp             ECCCCSCBHHHHHHSSS
T ss_pred             EEcCCCCcHHHHHHhcC
Confidence            99999999999998643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.01  E-value=5.8e-10  Score=108.04  Aligned_cols=90  Identities=27%  Similarity=0.376  Sum_probs=79.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|++.+.||+|+||.||++.. .+++.||+|.+... .....+.+.+|+.++..++||||+++++++......++|+||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            5688889999999999999995 46889999998633 233456799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhc
Q 008332          542 MPNKSLDCYLFG  553 (570)
Q Consensus       542 ~~~GsL~~~L~~  553 (570)
                      +++|+|.+++..
T Consensus        87 ~~~~~L~~~l~~   98 (276)
T 2yex_A           87 CSGGELFDRIEP   98 (276)
T ss_dssp             CTTEEGGGGSBT
T ss_pred             cCCCcHHHHHhh
Confidence            999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.01  E-value=8.6e-10  Score=108.93  Aligned_cols=92  Identities=18%  Similarity=0.239  Sum_probs=80.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+.....   ...+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            46789999999999999999995 4688999999964322   2346799999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      +||+++|+|.+++...
T Consensus       113 ~e~~~~~~L~~~l~~~  128 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ  128 (309)
T ss_dssp             EECCCCEEHHHHHHHH
T ss_pred             EEecCCCCHHHHHHhc
Confidence            9999999999999853

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.01  E-value=3.3e-10  Score=111.38  Aligned_cols=94  Identities=15%  Similarity=0.271  Sum_probs=65.5

Q ss_pred             HHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ....++|.+.+.||+|+||.||++. ..+++.||+|.+.... ....+.+.+|+.++.+++||||+++++++...+..++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            4456789999999999999999998 4568899999986432 3345678899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhc
Q 008332          538 IYEYMPNKSLDCYLFG  553 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~  553 (570)
                      ||||+++|+|.+++..
T Consensus        91 v~e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKH  106 (303)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EehhccCCchHHHHHH
Confidence            9999999999999873

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.01  E-value=9.2e-10  Score=107.96  Aligned_cols=92  Identities=24%  Similarity=0.243  Sum_probs=78.9

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---------ccHHHHHHHHHHHHccC-CCCccceeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---------QGFEEFKNEVMLTAKLQ-HVNLIRVLGFCID  531 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---------~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~  531 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+.....         ...+.+.+|+.++.++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            46788999999999999999995 4688999999864321         12356889999999995 9999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ....++||||+++|+|.+++...
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~  118 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK  118 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc
Confidence            99999999999999999999853

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.01  E-value=4.4e-10  Score=112.99  Aligned_cols=90  Identities=29%  Similarity=0.390  Sum_probs=77.1

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ..|...+.||+|+||.||++.. .+++.||||++.....   ...+.+.+|+.++.+++||||+++++++......++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4478889999999999999994 6688999999964322   23457899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||++ |+|.+++...
T Consensus       134 e~~~-g~l~~~l~~~  147 (348)
T 1u5q_A          134 EYCL-GSASDLLEVH  147 (348)
T ss_dssp             ECCS-EEHHHHHHHH
T ss_pred             ecCC-CCHHHHHHHh
Confidence            9997 6899988643

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.01  E-value=8.4e-10  Score=106.94  Aligned_cols=92  Identities=22%  Similarity=0.359  Sum_probs=80.0

Q ss_pred             hcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|.+.+.||+|+||.||++... +++.||+|.+...   .....+.+.+|+.++..++||||+++++++......++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            356888999999999999999954 6889999998532   123456789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.+++...
T Consensus        90 ~e~~~~~~L~~~l~~~  105 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH  105 (276)
T ss_dssp             EECCCSCBHHHHHHHH
T ss_pred             EeccCCCcHHHHHhcc
Confidence            9999999999999753

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.01  E-value=5.7e-10  Score=117.84  Aligned_cols=91  Identities=26%  Similarity=0.289  Sum_probs=75.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.+....  ......+.+|+.++..++||||+++++++......++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4588889999999999999995 468899999986432  2335678999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus       117 ~~~~g~L~~~~~~~  130 (494)
T 3lij_A          117 CYKGGELFDEIIHR  130 (494)
T ss_dssp             CCCSCBHHHHHHHH
T ss_pred             cCCCCcHHHHHHHc
Confidence            99999999998753

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.00  E-value=5.7e-10  Score=113.03  Aligned_cols=104  Identities=13%  Similarity=0.132  Sum_probs=82.3

Q ss_pred             HHhcCcccceeeeccCCccEEEEE------ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC---CCCccceeEEEEe
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGV------LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ---HVNLIRVLGFCID  531 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~------~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~---h~niv~l~g~~~~  531 (570)
                      ...++|.+.+.||+|+||.||+|.      ...++.||+|.+...   ...++.+|+.++..++   |+|++++++.+..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345678889999999999999994      456889999999643   3456888888888886   9999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCCC-CcccccHhhhh
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLSH-QKTYFGLEKTC  567 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~~-~~~~~~~~~~~  567 (570)
                      .+..++||||+++|+|.++|...+. ....+++.+++
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~  175 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVI  175 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHH
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHH
Confidence            9999999999999999999985322 23345555444

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.00  E-value=4.2e-10  Score=110.51  Aligned_cols=90  Identities=20%  Similarity=0.344  Sum_probs=72.1

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--------------------------ccHHHHHHHHHHHH
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--------------------------QGFEEFKNEVMLTA  515 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--------------------------~~~~~f~~e~~~l~  515 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+.....                          ...+.+.+|+.++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            35688899999999999999984 5688999999853321                          11346899999999


Q ss_pred             ccCCCCccceeEEEEe--CCeeEEEEecCCCCCHHHHHh
Q 008332          516 KLQHVNLIRVLGFCID--SEERMLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       516 ~l~h~niv~l~g~~~~--~~~~~lv~e~~~~GsL~~~L~  552 (570)
                      +++||||+++++++..  ....++||||+++|+|.+++.
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  130 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT  130 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh
Confidence            9999999999999987  467899999999999988654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.00  E-value=3.1e-10  Score=114.05  Aligned_cols=87  Identities=23%  Similarity=0.417  Sum_probs=76.7

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcc-----------------cHHHHHHHHHHHHccCCCCccce
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ-----------------GFEEFKNEVMLTAKLQHVNLIRV  525 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~-----------------~~~~f~~e~~~l~~l~h~niv~l  525 (570)
                      ..+|.+.+.||+|+||.||++.. +++.||+|.+......                 ..+.|.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            35788999999999999999998 7999999998532111                 12789999999999999999999


Q ss_pred             eEEEEeCCeeEEEEecCCCCCHHHH
Q 008332          526 LGFCIDSEERMLIYEYMPNKSLDCY  550 (570)
Q Consensus       526 ~g~~~~~~~~~lv~e~~~~GsL~~~  550 (570)
                      ++++...+..++||||+++|+|.++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHH
Confidence            9999999999999999999999999

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.00  E-value=5.8e-10  Score=117.58  Aligned_cols=92  Identities=26%  Similarity=0.312  Sum_probs=80.1

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||||++...  .......+.+|+.++.+++||||+++++++......++|+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            34588899999999999999995 46889999998532  2234578999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus       101 e~~~~~~L~~~~~~~  115 (486)
T 3mwu_A          101 ELYTGGELFDEIIKR  115 (486)
T ss_dssp             CCCCSCBHHHHHHHH
T ss_pred             EcCCCCcHHHHHHhc
Confidence            999999999998753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.00  E-value=9.3e-10  Score=107.76  Aligned_cols=91  Identities=22%  Similarity=0.292  Sum_probs=78.9

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ..+|...+.||+|+||.||++.. ..++.+|+|.+...   .....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            35688889999999999999995 45789999998533   223456789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhc
Q 008332          539 YEYMPNKSLDCYLFG  553 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~  553 (570)
                      |||+++++|.+++..
T Consensus        94 ~e~~~~~~L~~~~~~  108 (294)
T 2rku_A           94 LELCRRRSLLELHKR  108 (294)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EecCCCCCHHHHHHh
Confidence            999999999999875

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.00  E-value=4.4e-10  Score=112.27  Aligned_cols=90  Identities=21%  Similarity=0.352  Sum_probs=77.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|.+.+.||+|+||.||++.. .+++.||+|.+....   ......+.+|+.++..++||||+++++++..+...++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5688899999999999999994 668899999985321   122357899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+ +|+|.+++...
T Consensus        89 E~~-~g~l~~~l~~~  102 (336)
T 3h4j_B           89 EYA-GGELFDYIVEK  102 (336)
T ss_dssp             CCC-CEEHHHHHHHH
T ss_pred             ECC-CCcHHHHHHHc
Confidence            999 78999998753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.00  E-value=8.6e-10  Score=110.27  Aligned_cols=91  Identities=22%  Similarity=0.292  Sum_probs=79.2

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ..+|.+.+.||+|+||.||++.. .+++.+|+|.+...   .....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            45688899999999999999995 45789999998533   223456789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhc
Q 008332          539 YEYMPNKSLDCYLFG  553 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~  553 (570)
                      |||+++++|.+++..
T Consensus       120 ~e~~~~~~L~~~~~~  134 (335)
T 2owb_A          120 LELCRRRSLLELHKR  134 (335)
T ss_dssp             ECCCTTCBHHHHHHH
T ss_pred             EecCCCCCHHHHHhc
Confidence            999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.00  E-value=2.7e-10  Score=118.70  Aligned_cols=92  Identities=20%  Similarity=0.158  Sum_probs=71.2

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|.+.+.||+|+||.||++. ..+++.||+|.+...   .......+.+|+.++.+++||||+++++++...+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            3568889999999999999999 456889999999632   233445688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.+++...
T Consensus       227 ~e~~~~~~L~~~l~~~  242 (446)
T 4ejn_A          227 MEYANGGELFFHLSRE  242 (446)
T ss_dssp             ECCCSSCBHHHHHHHH
T ss_pred             EeeCCCCcHHHHHHhc
Confidence            9999999999999753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.99  E-value=1.1e-09  Score=106.60  Aligned_cols=93  Identities=20%  Similarity=0.359  Sum_probs=77.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEec----CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ..++|++.+.||+|+||.||+|...    .+..||+|.+.... ....+.|.+|+.++.+++||||+++++++ ..+..+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccE
Confidence            3467888999999999999999853    24579999986433 33456799999999999999999999987 456789


Q ss_pred             EEEecCCCCCHHHHHhcCC
Q 008332          537 LIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~  555 (570)
                      +||||+++|+|.+++....
T Consensus        92 lv~e~~~~~~L~~~l~~~~  110 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRK  110 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTT
T ss_pred             EEEecCCCCCHHHHHHhcC
Confidence            9999999999999998643

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.99  E-value=1.3e-09  Score=106.62  Aligned_cols=90  Identities=23%  Similarity=0.418  Sum_probs=76.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|++.+.||+|+||.||++.. .+++.||+|++....  ......+.+|+.++.+++||||+++++++......++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4678889999999999999995 468899999996432  2334678999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++ +|.+++...
T Consensus        82 ~~~~-~l~~~~~~~   94 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSC   94 (292)
T ss_dssp             CCSE-EHHHHHHHT
T ss_pred             cCCC-CHHHHHHhC
Confidence            9975 677776643

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.99  E-value=1e-09  Score=109.18  Aligned_cols=83  Identities=22%  Similarity=0.237  Sum_probs=73.4

Q ss_pred             ceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          469 RNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      .+.||+|+||.||++.. .+++.||||.+..   .....+.+|+.++..+. ||||+++++++......++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            37899999999999995 4688999999853   23457889999999996 9999999999999999999999999999


Q ss_pred             HHHHHhcC
Q 008332          547 LDCYLFGL  554 (570)
Q Consensus       547 L~~~L~~~  554 (570)
                      |.+++...
T Consensus        93 L~~~l~~~  100 (325)
T 3kn6_A           93 LFERIKKK  100 (325)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhc
Confidence            99999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.99  E-value=7.5e-10  Score=110.41  Aligned_cols=94  Identities=30%  Similarity=0.429  Sum_probs=77.2

Q ss_pred             HHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ...++|.+.+.||+|+||.||++. ..+++.||+|+++....  ...+.+.+|+.++.+++||||+++++++......++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            345679999999999999999998 45688999999964332  224568899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      ||||++ |+|.+++....
T Consensus       111 v~e~~~-~~L~~~~~~~~  127 (329)
T 3gbz_A          111 IFEYAE-NDLKKYMDKNP  127 (329)
T ss_dssp             EEECCS-EEHHHHHHHCT
T ss_pred             EEecCC-CCHHHHHhhcC
Confidence            999998 59999998643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.99  E-value=7.9e-10  Score=111.71  Aligned_cols=100  Identities=21%  Similarity=0.215  Sum_probs=83.3

Q ss_pred             cChHHHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-----CCCccceeE
Q 008332          454 YSLADIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-----HVNLIRVLG  527 (570)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-----h~niv~l~g  527 (570)
                      +++.+.....++|.+.+.||+|+||.||++.. .+++.||||++... ......+..|+.++.+++     ||||+++++
T Consensus        25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            34444445567899999999999999999995 56889999999532 233456788999999886     999999999


Q ss_pred             EEEeCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          528 FCIDSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       528 ~~~~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .+...+..++||||+ +|+|.+++....
T Consensus       104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~  130 (360)
T 3llt_A          104 KFMYYDHMCLIFEPL-GPSLYEIITRNN  130 (360)
T ss_dssp             EEEETTEEEEEECCC-CCBHHHHHHHTT
T ss_pred             eeeECCeeEEEEcCC-CCCHHHHHHhcC
Confidence            999999999999999 899999998654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.99  E-value=9.9e-10  Score=107.13  Aligned_cols=91  Identities=27%  Similarity=0.550  Sum_probs=75.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcc-c------HHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQ-G------FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~-~------~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+...... .      .+.+.+|+.++.+++||||+++++++...  
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--   95 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--   95 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence            35688889999999999999995 56889999998633221 1      16789999999999999999999987544  


Q ss_pred             eEEEEecCCCCCHHHHHhcCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .++||||+++|+|.+++....
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~  116 (287)
T 4f0f_A           96 PRMVMEFVPCGDLYHRLLDKA  116 (287)
T ss_dssp             TEEEEECCTTCBHHHHHHCTT
T ss_pred             CeEEEEecCCCCHHHHHhccc
Confidence            379999999999999998643

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.99  E-value=1.3e-09  Score=106.23  Aligned_cols=93  Identities=26%  Similarity=0.301  Sum_probs=81.1

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ..++|++.+.||+|+||.||++.. .+++.||+|.+...  .....+.+.+|+.++.+++||||+++++++......++|
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            345689999999999999999995 46889999998532  234567899999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      +||+++++|.+++...
T Consensus       100 ~e~~~~~~L~~~l~~~  115 (287)
T 2wei_A          100 GELYTGGELFDEIIKR  115 (287)
T ss_dssp             ECCCCSCBHHHHHHHH
T ss_pred             EEccCCCCHHHHHHhc
Confidence            9999999999998753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.98  E-value=1.4e-09  Score=106.31  Aligned_cols=89  Identities=25%  Similarity=0.356  Sum_probs=75.5

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC----CeeEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS----EERML  537 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~----~~~~l  537 (570)
                      .|.+.+.||+|+||.||+|.. .++..||+|.+...  .....+.+.+|+.++.+++||||+++++++...    ...++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            467778999999999999985 55788999998632  334456799999999999999999999988753    45899


Q ss_pred             EEecCCCCCHHHHHhc
Q 008332          538 IYEYMPNKSLDCYLFG  553 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~  553 (570)
                      ||||+++|+|.+++..
T Consensus       107 v~e~~~~~~L~~~l~~  122 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKR  122 (290)
T ss_dssp             EEECCCSCBHHHHHHH
T ss_pred             EEEecCCCCHHHHHHH
Confidence            9999999999999975

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.97  E-value=8.2e-10  Score=107.27  Aligned_cols=92  Identities=30%  Similarity=0.457  Sum_probs=78.8

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+....   ......+.+|+.++.+++||||+++++++......++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            35688889999999999999984 457799999985321   22346789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.+++...
T Consensus        88 ~e~~~~~~l~~~l~~~  103 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL  103 (279)
T ss_dssp             ECCCTTEEHHHHHHHH
T ss_pred             EecCCCCcHHHHHHhc
Confidence            9999999999999753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.97  E-value=2.3e-09  Score=105.20  Aligned_cols=87  Identities=29%  Similarity=0.392  Sum_probs=72.2

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHc--cCCCCccceeEEEEeC----CeeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK--LQHVNLIRVLGFCIDS----EERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~--l~h~niv~l~g~~~~~----~~~~  536 (570)
                      .++|++.+.||+|+||.||+|.. +++.||||++..   .....+.+|.+++..  ++||||+++++.+...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            35688899999999999999987 489999999853   234556677777766  7999999999987653    3588


Q ss_pred             EEEecCCCCCHHHHHhc
Q 008332          537 LIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~  553 (570)
                      +||||+++|+|.++++.
T Consensus        83 lv~e~~~~g~L~~~l~~   99 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQL   99 (301)
T ss_dssp             EEECCCTTCBHHHHHTT
T ss_pred             EehhhccCCCHHHHHhh
Confidence            99999999999999964

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.97  E-value=7.4e-10  Score=111.46  Aligned_cols=93  Identities=20%  Similarity=0.193  Sum_probs=79.3

Q ss_pred             HhcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKT---STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  536 (570)
                      ...+|.+.+.||+|+||.||++... +++.||+|+++..   .....+.+..|..++..+ +||||+++.+++...+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            3467899999999999999999954 4788999999632   123456788999999988 8999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +||||+++|+|.++|...
T Consensus        98 lv~E~~~gg~L~~~l~~~  115 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQV  115 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHhc
Confidence            999999999999999853

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.97  E-value=8.1e-10  Score=114.06  Aligned_cols=93  Identities=22%  Similarity=0.323  Sum_probs=75.9

Q ss_pred             HHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--------cccHHHHHHHHHHHHccCCCCccceeEEEEe
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--------TQGFEEFKNEVMLTAKLQHVNLIRVLGFCID  531 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--------~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~  531 (570)
                      ...++|.+.+.||+|+||.||+|.. .+++.||||.+....        ......+.+|+.++.+++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            3457799999999999999999984 557899999985321        111224889999999999999999999874 


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .+..++||||+++|+|.+++...
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~~  233 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVGN  233 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSSS
T ss_pred             cCceEEEEEcCCCCcHHHHHhcc
Confidence            56689999999999999998754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.97  E-value=6.9e-10  Score=108.53  Aligned_cols=92  Identities=26%  Similarity=0.455  Sum_probs=75.4

Q ss_pred             HhcCcccce-eeeccCCccEEEEEe---cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          462 ATERFSIRN-KLGEGGYGPVYKGVL---PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       462 ~~~~~~~~~-~lg~G~fg~V~~~~~---~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      ...+|.+.+ .||+|+||.||++..   ..++.||||.++....  ...+.+.+|+.++..++||||+++++++ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            345677777 999999999999964   3467899999964332  2356799999999999999999999998 66778


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++||||+++|+|.+++...
T Consensus        93 ~lv~e~~~~~~L~~~l~~~  111 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQN  111 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHC
T ss_pred             EEEEEeCCCCCHHHHHHhC
Confidence            9999999999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.97  E-value=1.1e-09  Score=109.82  Aligned_cols=88  Identities=19%  Similarity=0.291  Sum_probs=75.5

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .++|.+.+.||+|+||.||++.. .+++.+|+|.+......    +.+|+.++.++ +||||+++++++......++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            35688899999999999999995 46889999999644322    35688888887 79999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++|+|.+++...
T Consensus        97 ~~~gg~L~~~i~~~  110 (342)
T 2qr7_A           97 LMKGGELLDKILRQ  110 (342)
T ss_dssp             CCCSCBHHHHHHTC
T ss_pred             CCCCCcHHHHHHHc
Confidence            99999999999864

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.97  E-value=9.5e-10  Score=107.96  Aligned_cols=91  Identities=25%  Similarity=0.347  Sum_probs=77.2

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEe----------
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID----------  531 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~----------  531 (570)
                      .++|++.+.||+|+||.||++.. .+++.||+|.+... ....+.+.+|+.++.+++||||+++++.+..          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            34688889999999999999994 56889999998532 2345678999999999999999999998865          


Q ss_pred             ---CCeeEEEEecCCCCCHHHHHhcC
Q 008332          532 ---SEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       532 ---~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                         ....++||||+++|+|.+++...
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE  109 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc
Confidence               34679999999999999999864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.97  E-value=2.9e-10  Score=110.47  Aligned_cols=89  Identities=27%  Similarity=0.477  Sum_probs=75.9

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC-CeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-EERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e~  541 (570)
                      .++|++.+.||+|+||.||++... ++.||+|.++...  ..+.|.+|+.++.+++||||+++++.+... ...++|+||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            456888999999999999999875 8899999986432  456799999999999999999999987655 478999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      +++|+|.+++...
T Consensus        97 ~~~~~L~~~l~~~  109 (278)
T 1byg_A           97 MAKGSLVDYLRSR  109 (278)
T ss_dssp             CTTEEHHHHHHHH
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999999753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.96  E-value=8.4e-10  Score=112.00  Aligned_cols=91  Identities=25%  Similarity=0.491  Sum_probs=75.1

Q ss_pred             CcccceeeeccCCccEEEEEec--CC--cEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeC-CeeEEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLP--CG--EVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-EERMLI  538 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~--~~--~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~~~~lv  538 (570)
                      .|.+.+.||+|+||.||+|...  ++  ..||+|.+... .....+.|.+|+.++.+++||||++++++|... ...++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3567789999999999999853  22  36899998643 334457899999999999999999999998654 578999


Q ss_pred             EecCCCCCHHHHHhcCC
Q 008332          539 YEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~  555 (570)
                      |||+++|+|.++|+...
T Consensus       170 ~e~~~~g~L~~~l~~~~  186 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNET  186 (373)
T ss_dssp             EECCTTCBHHHHHHCTT
T ss_pred             EECCCCCCHHHHHhhcc
Confidence            99999999999998644

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.96  E-value=1.4e-09  Score=108.49  Aligned_cols=91  Identities=26%  Similarity=0.415  Sum_probs=78.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|++.+.||+|+||.||++.. .+++.||+|.+.....  ...+.+.+|+.++.+++||||+++++++......++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            4688889999999999999995 4588999999854332  234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+++++|.+++...
T Consensus       105 ~~~~~~l~~~~~~~  118 (331)
T 4aaa_A          105 FVDHTILDDLELFP  118 (331)
T ss_dssp             CCSEEHHHHHHHST
T ss_pred             cCCcchHHHHHhhc
Confidence            99999999887643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.96  E-value=6.4e-10  Score=110.68  Aligned_cols=95  Identities=26%  Similarity=0.425  Sum_probs=80.7

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEe-----
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID-----  531 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~-----  531 (570)
                      +.....+|.+.+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+.++.++ +||||+++++++..     
T Consensus        19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~   97 (326)
T 2x7f_A           19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG   97 (326)
T ss_dssp             CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred             ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence            344567789999999999999999995 568899999986432 2346789999999998 89999999999987     


Q ss_pred             -CCeeEEEEecCCCCCHHHHHhcC
Q 008332          532 -SEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       532 -~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                       ....++||||+++|+|.+++...
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 2x7f_A           98 MDDQLWLVMEFCGAGSVTDLIKNT  121 (326)
T ss_dssp             CCCEEEEEEECCTTEEHHHHHHHS
T ss_pred             ccceEEEEEEcCCCCcHHHHHHhc
Confidence             45789999999999999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.96  E-value=1e-09  Score=106.81  Aligned_cols=91  Identities=25%  Similarity=0.407  Sum_probs=78.6

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.+....   ......+.+|+.++.+++||||+++++++......++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            5688889999999999999995 457789999985321   223467899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.+++...
T Consensus        94 e~~~~~~L~~~l~~~  108 (284)
T 2vgo_A           94 EFAPRGELYKELQKH  108 (284)
T ss_dssp             CCCTTEEHHHHHHHH
T ss_pred             EeCCCCcHHHHHHhc
Confidence            999999999999854

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.96  E-value=1.6e-09  Score=105.35  Aligned_cols=88  Identities=24%  Similarity=0.380  Sum_probs=74.9

Q ss_pred             hcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEe----------
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID----------  531 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~----------  531 (570)
                      ..+|+..+.||+|+||.||++... +++.||+|.+....    ..+.+|+.++.+++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            355888999999999999999964 68999999996433    346789999999999999999998754          


Q ss_pred             ------CCeeEEEEecCCCCCHHHHHhcC
Q 008332          532 ------SEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       532 ------~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                            ....++||||+++|+|.+++...
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  114 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKR  114 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHG
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhc
Confidence                  34579999999999999999754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.95  E-value=1.7e-09  Score=107.81  Aligned_cols=88  Identities=19%  Similarity=0.204  Sum_probs=76.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .+|.+.+.||+|+||.||+|.. .+++.||||.+.....  .+.+.+|+.++.++ +||||+++++++......++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            5688899999999999999994 6688999999864322  23588999999999 999999999999999999999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      + +|+|.+++...
T Consensus        87 ~-~~~L~~~~~~~   98 (330)
T 2izr_A           87 L-GPSLEDLFDLC   98 (330)
T ss_dssp             C-CCBHHHHHHHT
T ss_pred             C-CCCHHHHHHHc
Confidence            9 99999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.95  E-value=1.4e-09  Score=110.00  Aligned_cols=99  Identities=21%  Similarity=0.350  Sum_probs=82.3

Q ss_pred             hHHHHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCc-----------ccHHHHHHHHHHHHccCCCCccc
Q 008332          456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST-----------QGFEEFKNEVMLTAKLQHVNLIR  524 (570)
Q Consensus       456 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~-----------~~~~~f~~e~~~l~~l~h~niv~  524 (570)
                      ..++.....+|.+.+.||+|+||.||++....++.||||++.....           ...+.+.+|+.++.+++||||++
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            4566777899999999999999999999977799999999853211           11367999999999999999999


Q ss_pred             eeEEEEeCC-----eeEEEEecCCCCCHHHHHhcCC
Q 008332          525 VLGFCIDSE-----ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       525 l~g~~~~~~-----~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      +++++...+     ..++||||++ |+|.+++...+
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~  128 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR  128 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT
T ss_pred             eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc
Confidence            999986532     5799999998 69999998643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.94  E-value=1.7e-09  Score=107.80  Aligned_cols=91  Identities=33%  Similarity=0.555  Sum_probs=71.9

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCc----EEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~----~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|+..+.||+|+||.||+|.. .+++    .||+|.+... .....+.|.+|+.++.+++||||++++++|.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            4588889999999999999994 3344    4688888533 3345678999999999999999999999998654 788


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      |+||+++|+|.+++...+
T Consensus        94 v~e~~~~g~L~~~l~~~~  111 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHK  111 (327)
T ss_dssp             EEECCTTCBHHHHHHHST
T ss_pred             EEEecCCCcHHHHHHhcC
Confidence            999999999999998654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.94  E-value=2.3e-09  Score=105.11  Aligned_cols=90  Identities=26%  Similarity=0.410  Sum_probs=74.6

Q ss_pred             cccceeeeccCCccEEEEEe-cCCc---EEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCee-EEEE
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGE---VIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER-MLIY  539 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~---~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~-~lv~  539 (570)
                      +...+.||+|+||.||+|.. ..++   .+|+|.+.... ....+.|.+|+.++.+++||||+++++++...+.. ++|+
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            55668999999999999984 2232   79999986433 34456899999999999999999999999876654 8999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      ||+.+|+|.+++....
T Consensus       103 e~~~~~~L~~~~~~~~  118 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQ  118 (298)
T ss_dssp             CCCTTCBHHHHHHCTT
T ss_pred             ecccCCCHHHHHhccc
Confidence            9999999999998643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.94  E-value=1.6e-09  Score=106.33  Aligned_cols=92  Identities=24%  Similarity=0.451  Sum_probs=75.4

Q ss_pred             cCcccceeeeccCCccEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeC-CeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-EERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~~~~l  537 (570)
                      .+|++.+.||+|+||.||+|....    ...+|+|.+.... ....+.+.+|+.++.+++||||+++++++... ...++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            447778999999999999998532    2368999986433 34456799999999999999999999997654 57899


Q ss_pred             EEecCCCCCHHHHHhcCC
Q 008332          538 IYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~  555 (570)
                      ||||+++|+|.+++....
T Consensus       105 v~e~~~~~~L~~~l~~~~  122 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNET  122 (298)
T ss_dssp             EEECCTTCBHHHHHHCTT
T ss_pred             EEeCCCCCCHHHHHHhcc
Confidence            999999999999998643

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.94  E-value=2.2e-09  Score=105.22  Aligned_cols=91  Identities=29%  Similarity=0.471  Sum_probs=76.2

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|++.+.||+|+||.||++.. .+++.||+|.+....  ......+.+|+.++.+++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            4688889999999999999995 468899999986432  2233678899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcCC
Q 008332          541 YMPNKSLDCYLFGLS  555 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~  555 (570)
                      |++ |+|.+++....
T Consensus        83 ~~~-~~L~~~~~~~~   96 (299)
T 2r3i_A           83 FLH-QDLKKFMDASA   96 (299)
T ss_dssp             CCS-EEHHHHHHHTT
T ss_pred             ccc-CCHHHHHHhhh
Confidence            998 69999998653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.94  E-value=5.2e-09  Score=104.76  Aligned_cols=91  Identities=23%  Similarity=0.382  Sum_probs=78.1

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHc--cCCCCccceeEEEEeCC----
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK--LQHVNLIRVLGFCIDSE----  533 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~--l~h~niv~l~g~~~~~~----  533 (570)
                      ....++|.+.+.||+|+||.||++... ++.||+|.+..   .....+.+|..++..  ++||||+++++++....    
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            445567999999999999999999975 89999999853   234678889988887  79999999999998775    


Q ss_pred             eeEEEEecCCCCCHHHHHhcC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..++||||+++|+|.++|.+.
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~  134 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRY  134 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHC
T ss_pred             eeEEEEeecCCCcHHHHHhcc
Confidence            789999999999999999753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.94  E-value=1.5e-09  Score=107.27  Aligned_cols=90  Identities=24%  Similarity=0.474  Sum_probs=73.9

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ..++|.+.+.||+|+||.||++.. .+++.||+|.+....  ..+.+.+|+.++.+++||||+++++.+......++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            456788999999999999999995 458899999986432  34678999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhc
Q 008332          541 YMPNKSLDCYLFG  553 (570)
Q Consensus       541 ~~~~GsL~~~L~~  553 (570)
                      |+++|+|.+++..
T Consensus       105 ~~~~~~L~~~~~~  117 (314)
T 3com_A          105 YCGAGSVSDIIRL  117 (314)
T ss_dssp             CCTTEEHHHHHHH
T ss_pred             cCCCCCHHHHHHh
Confidence            9999999999974

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.93  E-value=3e-09  Score=107.65  Aligned_cols=94  Identities=20%  Similarity=0.270  Sum_probs=79.9

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCc--------ccHHHHHHHHHHHHcc-CCCCccceeEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST--------QGFEEFKNEVMLTAKL-QHVNLIRVLGFC  529 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~--------~~~~~f~~e~~~l~~l-~h~niv~l~g~~  529 (570)
                      .....+|.+.+.||+|+||.||++... +|+.||||+++....        ...+.+.+|+.++.++ +||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            344466888899999999999999964 689999999864321        1134688999999999 899999999999


Q ss_pred             EeCCeeEEEEecCCCCCHHHHHhc
Q 008332          530 IDSEERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       530 ~~~~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ......++||||+++|+|.+++..
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~  193 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTE  193 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHH
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHh
Confidence            999999999999999999999975

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.92  E-value=1.2e-09  Score=106.54  Aligned_cols=104  Identities=19%  Similarity=0.227  Sum_probs=78.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHH-HHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~-~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .++|++.+.||+|+||.||++.. .+++.||+|.++... ..... .+.++...+..++||||+++++++......++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46788899999999999999994 568899999996432 22223 3445555677889999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          540 EYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||++ |+|.+++.........+++.+++
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~  112 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILG  112 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHH
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHH
Confidence            9997 59998887533333445555443

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.92  E-value=1.7e-09  Score=107.40  Aligned_cols=91  Identities=21%  Similarity=0.299  Sum_probs=73.8

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc--------ccHHHHHHHHHHHHccCCCCccceeEEEEeCC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST--------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~--------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~  533 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||||.+.....        .....+.+|+.++.+++||||+++++++... 
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-   87 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-   87 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence            45688899999999999999995 4578999999853221        1223588999999999999999999988654 


Q ss_pred             eeEEEEecCCCCCHHHHHhcC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..++||||+++|+|.+++...
T Consensus        88 ~~~lv~e~~~~~~L~~~~~~~  108 (322)
T 2ycf_A           88 DYYIVLELMEGGELFDKVVGN  108 (322)
T ss_dssp             SEEEEEECCTTEETHHHHSTT
T ss_pred             ceEEEEecCCCCcHHHHHhcc
Confidence            489999999999999999754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.92  E-value=2e-09  Score=106.51  Aligned_cols=89  Identities=27%  Similarity=0.422  Sum_probs=71.8

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEE------------
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI------------  530 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~------------  530 (570)
                      .+|.+.+.||+|+||.||++... +++.||+|.+........+.+.+|+.++.+++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            56888999999999999999954 48899999997665556678999999999999999999998873            


Q ss_pred             --eCCeeEEEEecCCCCCHHHHHhc
Q 008332          531 --DSEERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       531 --~~~~~~lv~e~~~~GsL~~~L~~  553 (570)
                        .....++||||++ |+|.+++..
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~~  114 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLEQ  114 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHTT
T ss_pred             ccccCceeEEeeccC-CCHHHHhhc
Confidence              3357899999998 699999975

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.92  E-value=1.1e-09  Score=111.07  Aligned_cols=92  Identities=17%  Similarity=0.197  Sum_probs=69.9

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHH-HHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNEVML-TAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e~~~-l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .++|++.+.||+|+||.||++.. .+++.+|+|+++...   ......+.+|..+ +..++||||+++++.+...+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            35688999999999999999995 457899999996432   2233456677776 467899999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.++|...
T Consensus       117 v~E~~~gg~L~~~l~~~  133 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE  133 (373)
T ss_dssp             EEECCCSCBHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHhc
Confidence            99999999999999853

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.92  E-value=1.2e-09  Score=111.51  Aligned_cols=101  Identities=23%  Similarity=0.388  Sum_probs=74.6

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----  533 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----  533 (570)
                      +....+|.+.+.||+|+||.||++.. .+++.||+|++.....    ...+|+.+|..++||||+++++++....     
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            44567899999999999999999984 6789999999854322    1247999999999999999999985432     


Q ss_pred             ---------------------------------eeEEEEecCCCCCHHHHHhcCCCCcccccHhh
Q 008332          534 ---------------------------------ERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEK  565 (570)
Q Consensus       534 ---------------------------------~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~  565 (570)
                                                       ..++||||++ |+|.+.|.........+++..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~  142 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNL  142 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHH
Confidence                                             3789999998 588888874333333444443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.92  E-value=2.1e-09  Score=107.09  Aligned_cols=96  Identities=19%  Similarity=0.245  Sum_probs=80.0

Q ss_pred             HHHHhcCcccc-eeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCC
Q 008332          459 IEAATERFSIR-NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSE  533 (570)
Q Consensus       459 ~~~~~~~~~~~-~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~  533 (570)
                      .+....++.+. +.||+|+||.||++.. .+++.||+|.+...  .......+.+|+.++..+ +||||+++++++....
T Consensus        23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~  102 (327)
T 3lm5_A           23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS  102 (327)
T ss_dssp             HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence            34444556665 8999999999999995 46889999998642  334467899999999999 5699999999999999


Q ss_pred             eeEEEEecCCCCCHHHHHhcC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..++||||+++|+|.+++...
T Consensus       103 ~~~lv~e~~~~~~L~~~~~~~  123 (327)
T 3lm5_A          103 EIILILEYAAGGEIFSLCLPE  123 (327)
T ss_dssp             EEEEEEECCTTEEGGGGGSSC
T ss_pred             eEEEEEEecCCCcHHHHHHHh
Confidence            999999999999999998753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.92  E-value=2.8e-09  Score=115.78  Aligned_cols=84  Identities=29%  Similarity=0.449  Sum_probs=71.4

Q ss_pred             eeeeccCCccEEEEEe---cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVL---PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~---~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||+|..   ..++.||||+++...  ....++|.+|+.+|.+++||||+++++++. .+..++|||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            4799999999999974   345789999997432  334678999999999999999999999985 5568899999999


Q ss_pred             CCHHHHHhcC
Q 008332          545 KSLDCYLFGL  554 (570)
Q Consensus       545 GsL~~~L~~~  554 (570)
                      |+|.++|...
T Consensus       454 g~L~~~l~~~  463 (635)
T 4fl3_A          454 GPLNKYLQQN  463 (635)
T ss_dssp             EEHHHHHHHC
T ss_pred             CCHHHHHhhC
Confidence            9999999754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.90  E-value=5.4e-09  Score=104.36  Aligned_cols=89  Identities=27%  Similarity=0.407  Sum_probs=74.2

Q ss_pred             HhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc--CCCCccceeEEEEeC----Cee
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL--QHVNLIRVLGFCIDS----EER  535 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l--~h~niv~l~g~~~~~----~~~  535 (570)
                      ..++|++.+.||+|+||.||+|... ++.||||++...   ....+.+|.+++..+  +||||+++++.+...    ...
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            3467899999999999999999876 899999998532   234556666666654  899999999999887    678


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++||||+++|+|.++|+..
T Consensus       111 ~lv~e~~~~g~L~~~l~~~  129 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKST  129 (337)
T ss_dssp             EEEECCCTTCBHHHHHHHC
T ss_pred             EEEEeccCCCcHHHHhhcc
Confidence            9999999999999999754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.90  E-value=3.2e-09  Score=103.12  Aligned_cols=91  Identities=30%  Similarity=0.469  Sum_probs=75.9

Q ss_pred             hcCcccceeeeccCCccEEEEEecC----CcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .++|.+.+.||+|+||.||+|....    +..||+|.+... .....+.|.+|+.++.+++||||+++++++. .+..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-SSSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCEE
Confidence            4568889999999999999998532    236999998644 3344567999999999999999999999875 456789


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||+++|+|.+++...
T Consensus        90 v~e~~~~~~L~~~l~~~  106 (281)
T 3cc6_A           90 IMELYPYGELGHYLERN  106 (281)
T ss_dssp             EEECCTTCBHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHhc
Confidence            99999999999999754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.90  E-value=3e-09  Score=105.15  Aligned_cols=99  Identities=22%  Similarity=0.171  Sum_probs=78.2

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|+..+.||+|+||.||+|... +++.||||++....  ......+..|+..+.++ +||||+++++++......++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            56888999999999999999954 68999999986432  23334566677666665 8999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          540 EYMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      ||+ +|+|.+++.....   .+++.++
T Consensus       137 e~~-~~~L~~~~~~~~~---~l~~~~~  159 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGA---SLPEAQV  159 (311)
T ss_dssp             ECC-CCBHHHHHHHHCS---CCCHHHH
T ss_pred             ecc-CCCHHHHHHhcCC---CCCHHHH
Confidence            999 6799999886432   3455443

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.90  E-value=1.3e-09  Score=110.00  Aligned_cols=91  Identities=24%  Similarity=0.293  Sum_probs=78.0

Q ss_pred             cCcccceeeeccCCccEEEEEe----cCCcEEEEEEecCCC----cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTS----TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~----~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~  534 (570)
                      .+|.+.+.||+|+||.||++..    .+++.||||+++...    ....+.+.+|+.++.++ +||||+++.+++.....
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5688899999999999999995    368899999986322    12335677899999999 79999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++||||+++|+|.++|...
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~  153 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQR  153 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHH
T ss_pred             EEEEeecCCCCCHHHHHHHc
Confidence            99999999999999999853

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.89  E-value=1.4e-09  Score=108.67  Aligned_cols=92  Identities=21%  Similarity=0.337  Sum_probs=78.2

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc--------ccHHHHHHHHHHHHccCCCCccceeEEEEeCC
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST--------QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~--------~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~  533 (570)
                      ..+|.+.+.||+|+||.||++. ..+++.||||.+.....        .....+.+|+.++.+++||||+++++++....
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            4568889999999999999998 45688999999864321        12235778999999999999999999999999


Q ss_pred             eeEEEEecCCCC-CHHHHHhcC
Q 008332          534 ERMLIYEYMPNK-SLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~G-sL~~~L~~~  554 (570)
                      ..++||||+..| +|.+++...
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~  124 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRH  124 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTC
T ss_pred             EEEEEEEeCCCCccHHHHHHhc
Confidence            999999999877 999999864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.89  E-value=1.5e-09  Score=119.23  Aligned_cols=91  Identities=16%  Similarity=0.329  Sum_probs=74.6

Q ss_pred             hcCcccceeeeccCCccEEEEEec--CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe-----
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP--CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE-----  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~--~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~-----  534 (570)
                      ..+|.+.+.||+|+||.||++...  +++.||||.+.... ......|.+|+.++.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            367899999999999999999964  58899999986433 3345678999999999999999999999987654     


Q ss_pred             eEEEEecCCCCCHHHHHhc
Q 008332          535 RMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~  553 (570)
                      .+|||||+++|+|.+++..
T Consensus       159 ~~lv~E~~~g~~L~~~~~~  177 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ  177 (681)
T ss_dssp             EEEEEECCCCEECC----C
T ss_pred             eEEEEEeCCCCcHHHHHhC
Confidence            6999999999999988764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.89  E-value=2.8e-09  Score=104.11  Aligned_cols=91  Identities=29%  Similarity=0.503  Sum_probs=75.4

Q ss_pred             HhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ...+|++.+.||+|+||.||++...  ..+|+|.+....  ....+.|.+|+.++.+++||||+++++.+ .....++||
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            3467888999999999999999854  359999996433  33456799999999999999999999965 556789999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      ||+++|+|.+++....
T Consensus        99 e~~~~~~L~~~l~~~~  114 (289)
T 3og7_A           99 QWCEGSSLYHHLHASE  114 (289)
T ss_dssp             ECCCEEEHHHHHTTC-
T ss_pred             EecCCCcHHHHHhhcc
Confidence            9999999999997543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.89  E-value=3.4e-09  Score=106.26  Aligned_cols=91  Identities=23%  Similarity=0.393  Sum_probs=78.7

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCC--CCccceeEEEEeCCeeEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQH--VNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h--~niv~l~g~~~~~~~~~lv  538 (570)
                      ..+|.+.+.||+|+||.||++...+++.||||.+...  .....+.+.+|+.++.+++|  |||+++++++......++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            3568889999999999999999877899999998643  33345679999999999976  9999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      || +.+|+|.+++...
T Consensus        88 ~e-~~~~~L~~~l~~~  102 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKK  102 (343)
T ss_dssp             EC-CCSEEHHHHHHHS
T ss_pred             Ee-CCCCCHHHHHHhc
Confidence            99 5688999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.88  E-value=8.2e-10  Score=109.88  Aligned_cols=91  Identities=30%  Similarity=0.462  Sum_probs=74.8

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCccc-HHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~-~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.+....... ...+.+|+.++.+++||||+++++++......++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            4678889999999999999995 468899999986432211 12456899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhcCC
Q 008332          542 MPNKSLDCYLFGLS  555 (570)
Q Consensus       542 ~~~GsL~~~L~~~~  555 (570)
                      ++ |+|.+++....
T Consensus        82 ~~-~~l~~~~~~~~   94 (324)
T 3mtl_A           82 LD-KDLKQYLDDCG   94 (324)
T ss_dssp             CS-EEHHHHHHHTT
T ss_pred             cc-cCHHHHHHhcC
Confidence            97 59999998653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.88  E-value=5.4e-09  Score=113.95  Aligned_cols=95  Identities=21%  Similarity=0.361  Sum_probs=78.8

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEec----CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCC
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE  533 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~  533 (570)
                      ......+|.+.+.||+|+||.||+|...    .+..||+|.++... ....+.|.+|+.++.+++||||+++++++ ..+
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~  463 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TEN  463 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSS
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecC
Confidence            3444567888999999999999999853    24579999986433 33446799999999999999999999988 456


Q ss_pred             eeEEEEecCCCCCHHHHHhcC
Q 008332          534 ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..++||||+++|+|.++|...
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~  484 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVR  484 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHT
T ss_pred             ceEEEEEcCCCCcHHHHHHhc
Confidence            789999999999999999864

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.88  E-value=4.3e-09  Score=107.53  Aligned_cols=91  Identities=23%  Similarity=0.393  Sum_probs=78.3

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccC--CCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQ--HVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~--h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .+|.+.+.||+|+||.||++....++.||||.+...  .....+.+.+|+.++.+++  ||||+++++++...+..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            458889999999999999999777899999998643  2334567999999999996  599999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      | +.+|+|.++|....
T Consensus       136 E-~~~~~L~~~l~~~~  150 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK  150 (390)
T ss_dssp             E-CCSEEHHHHHHHCS
T ss_pred             e-cCCCCHHHHHHhcC
Confidence            9 67889999998643

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.87  E-value=3.1e-09  Score=106.70  Aligned_cols=93  Identities=24%  Similarity=0.359  Sum_probs=73.0

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcc-----cHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQ-----GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~-----~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      ...+|.+.+.||+|+||.||++.. .+++.||+|.+......     ..+.+.+|+.++.+++||||+++++++......
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            346788899999999999999994 46899999998642221     124688999999999999999999999988999


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++||||+++ +|.+++....
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~  106 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNS  106 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCC
T ss_pred             EEEEEcCCC-CHHHHHHhcC
Confidence            999999986 8999998643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.87  E-value=7.7e-09  Score=102.96  Aligned_cols=87  Identities=23%  Similarity=0.412  Sum_probs=76.0

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-CCCccceeEEEEe--CCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCID--SEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~--~~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||++. ..+++.||+|.+...   ..+.+.+|+.++.+++ ||||+++.+++..  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            568889999999999999998 466889999998633   3467899999999996 9999999999987  45789999


Q ss_pred             ecCCCCCHHHHHhc
Q 008332          540 EYMPNKSLDCYLFG  553 (570)
Q Consensus       540 e~~~~GsL~~~L~~  553 (570)
                      ||+++++|.+++..
T Consensus       113 e~~~~~~l~~~~~~  126 (330)
T 3nsz_A          113 EHVNNTDFKQLYQT  126 (330)
T ss_dssp             ECCCCCCHHHHGGG
T ss_pred             eccCchhHHHHHHh
Confidence            99999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.87  E-value=1.7e-09  Score=107.53  Aligned_cols=90  Identities=29%  Similarity=0.513  Sum_probs=73.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCc----EEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~----~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|++.+.||+|+||.||+|.. .+++    .|++|.+.... ......+.+|+.++.+++||||+++++++. ....++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            4688889999999999999994 3444    38888875332 233356788999999999999999999885 567889


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      |+||+++|+|.+++...
T Consensus        92 v~e~~~~~~L~~~l~~~  108 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH  108 (325)
T ss_dssp             EEECCTTCBSHHHHHSS
T ss_pred             EEEeCCCCCHHHHHHHc
Confidence            99999999999999864

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.86  E-value=3.8e-09  Score=109.51  Aligned_cols=91  Identities=20%  Similarity=0.344  Sum_probs=77.1

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC-----Ce
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-----EE  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-----~~  534 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||||++....  ....+.+.+|+.++.+++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            35788999999999999999994 558899999996432  23456799999999999999999999998766     56


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++||||+. |+|.+++...
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~  123 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP  123 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS
T ss_pred             EEEEEecCC-cCHHHHHhcc
Confidence            899999997 5999999863

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.86  E-value=3.8e-09  Score=103.88  Aligned_cols=91  Identities=25%  Similarity=0.360  Sum_probs=74.2

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC----cccHHHHHHHHHHHHccCCCCccceeEEEEe--CCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS----TQGFEEFKNEVMLTAKLQHVNLIRVLGFCID--SEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~----~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~--~~~~  535 (570)
                      ..+|.+.+.||+|+||.||++.. .+++.+|+|.+....    ......+.+|+.++.+++||||+++++++..  ....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            35788899999999999999994 568899999986321    2345679999999999999999999999854  3578


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++||||+++| |.+++...
T Consensus        84 ~lv~e~~~~~-l~~~~~~~  101 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSV  101 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHS
T ss_pred             EEEehhccCC-HHHHHHhC
Confidence            9999999876 88887754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.86  E-value=5.2e-09  Score=107.24  Aligned_cols=95  Identities=18%  Similarity=0.216  Sum_probs=73.1

Q ss_pred             Ccccc-eeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHc-cCCCCccceeEEEEe----CCeeEE
Q 008332          465 RFSIR-NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK-LQHVNLIRVLGFCID----SEERML  537 (570)
Q Consensus       465 ~~~~~-~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~-l~h~niv~l~g~~~~----~~~~~l  537 (570)
                      +|... ++||+|+||.||++.. .+++.||||++...     ..+.+|+.++.+ .+||||+++++++..    ....+|
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            45554 6899999999999994 56889999998532     456788888755 489999999999875    456899


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      ||||+++|+|.++|....  ...+++.++
T Consensus       137 v~E~~~gg~L~~~l~~~~--~~~l~~~~~  163 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRG--DQAFTEREA  163 (400)
T ss_dssp             EEECCCSEEHHHHHHCC-----CCBHHHH
T ss_pred             EEEeCCCCcHHHHHHHhC--CCCCCHHHH
Confidence            999999999999998643  223454443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.85  E-value=2.3e-09  Score=106.97  Aligned_cols=91  Identities=25%  Similarity=0.324  Sum_probs=76.5

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-CCCccceeEEEEeC-------
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDS-------  532 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~-------  532 (570)
                      ...+|++.+.||+|+||.||++.. .+++.||+|++........+.+.+|+.++.++. ||||+++++++...       
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            345688899999999999999994 568899999986555555678999999999995 99999999998532       


Q ss_pred             -CeeEEEEecCCCCCHHHHHhc
Q 008332          533 -EERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       533 -~~~~lv~e~~~~GsL~~~L~~  553 (570)
                       ...++++||+. |+|.+++..
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~  126 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKK  126 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHH
T ss_pred             CceEEEEEEecC-CCHHHHHHH
Confidence             34789999996 799999875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.85  E-value=7.2e-09  Score=104.23  Aligned_cols=91  Identities=20%  Similarity=0.373  Sum_probs=75.8

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC--------
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--------  532 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--------  532 (570)
                      .+|.+.+.||+|+||.||++.. .+++.||+|++....  ......+.+|+.++.+++||||+++++++...        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5688899999999999999995 568899999985332  22345788999999999999999999999874        


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCC
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ...++||||+++ +|.+.+....
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~  118 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVL  118 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTT
T ss_pred             ceEEEEEeccCC-CHHHHHhhcc
Confidence            468999999985 8888887643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.84  E-value=6.7e-09  Score=103.37  Aligned_cols=92  Identities=34%  Similarity=0.556  Sum_probs=76.3

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCc----EEEEEEecC-CCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~----~vavK~l~~-~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ..+|++.+.||+|+||.||+|.. .+++    .|++|.+.. ......+.+.+|+.++.+++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            35688899999999999999994 3444    468888753 33445678999999999999999999999998654 78


Q ss_pred             EEEecCCCCCHHHHHhcCC
Q 008332          537 LIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~  555 (570)
                      +++||+++|+|.+++....
T Consensus        93 ~v~~~~~~g~L~~~l~~~~  111 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHK  111 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTT
T ss_pred             EEEEecCCCcHHHHHHhcC
Confidence            9999999999999998654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.83  E-value=1.1e-08  Score=100.80  Aligned_cols=93  Identities=29%  Similarity=0.462  Sum_probs=72.5

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC-----cccHHHHHHHHHHHHcc---CCCCccceeEEEEeC
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS-----TQGFEEFKNEVMLTAKL---QHVNLIRVLGFCIDS  532 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~-----~~~~~~f~~e~~~l~~l---~h~niv~l~g~~~~~  532 (570)
                      ...+|++.+.||+|+||.||++. ..+++.||+|.+....     ......+.+|+.++.++   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            35679999999999999999999 4668899999985321     11234567777777766   599999999999876


Q ss_pred             C-----eeEEEEecCCCCCHHHHHhcCC
Q 008332          533 E-----ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       533 ~-----~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .     ..++|+||+. |+|.+++....
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~  113 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAP  113 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhcc
Confidence            5     4789999997 69999998654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.83  E-value=8.8e-09  Score=101.08  Aligned_cols=87  Identities=18%  Similarity=0.230  Sum_probs=71.9

Q ss_pred             cCcccc-eeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHH-HccCCCCccceeEEEEe----CCeeE
Q 008332          464 ERFSIR-NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLT-AKLQHVNLIRVLGFCID----SEERM  536 (570)
Q Consensus       464 ~~~~~~-~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l-~~l~h~niv~l~g~~~~----~~~~~  536 (570)
                      .+|... +.||+|+||.||++.. .+++.||+|.+..     ...+.+|+.++ ...+||||+++++++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            345555 7899999999999994 5688999999853     24577888888 45599999999999876    56789


Q ss_pred             EEEecCCCCCHHHHHhcCC
Q 008332          537 LIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~  555 (570)
                      +||||+++|+|.+++....
T Consensus        92 lv~e~~~~~~L~~~l~~~~  110 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRG  110 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCT
T ss_pred             EEEeecCCCcHHHHHHhcc
Confidence            9999999999999998743

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.82  E-value=4.3e-09  Score=106.54  Aligned_cols=90  Identities=24%  Similarity=0.339  Sum_probs=70.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC------
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------  533 (570)
                      ..+|...+.||+|+||.||++.. .+|+.||||.+...  .....+.+.+|+.++.+++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            35688899999999999999994 56899999999543  2233467899999999999999999999987653      


Q ss_pred             eeEEEEecCCCCCHHHHHhc
Q 008332          534 ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ..++||||+ +++|.+++..
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~  122 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH  122 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH
T ss_pred             eEEEEEecC-CCCHHHHHhc
Confidence            459999999 7899999985

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.82  E-value=4.4e-09  Score=109.97  Aligned_cols=90  Identities=22%  Similarity=0.393  Sum_probs=67.1

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC-----Cee
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-----EER  535 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  535 (570)
                      ++|.+.+.||+|+||.||++. ..+++.||||++....  ....+.+.+|+.+|.+++||||+++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            568899999999999999998 4568899999996432  23456799999999999999999999998544     468


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++||||+. |+|.+++...
T Consensus       133 ~lv~e~~~-~~L~~~~~~~  150 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLFRTP  150 (458)
T ss_dssp             EEEECCCS-EEHHHHHHSS
T ss_pred             EEEEeccc-cchhhhcccC
Confidence            99999984 7999999854

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.81  E-value=5.6e-09  Score=101.89  Aligned_cols=91  Identities=30%  Similarity=0.443  Sum_probs=68.9

Q ss_pred             hcCcccceeeeccCCccEEEEEec--CCc--EEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP--CGE--VIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~--~~~--~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      ..+|++.+.||+|+||.||++...  .++  .||+|+++..   .....+.+.+|+.++.+++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            356888999999999999999842  233  6899998643   2234568999999999999999999999987654 8


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++|+||+++|+|.+++...
T Consensus        96 ~~v~e~~~~~~L~~~l~~~  114 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH  114 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH
T ss_pred             eeeEecccCCCHHHHHHhc
Confidence            8999999999999999854

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.81  E-value=4.4e-09  Score=105.15  Aligned_cols=90  Identities=19%  Similarity=0.293  Sum_probs=72.7

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCC--------cccHHHHHHHHHHHHccC---------CCCccce
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--------TQGFEEFKNEVMLTAKLQ---------HVNLIRV  525 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~--------~~~~~~f~~e~~~l~~l~---------h~niv~l  525 (570)
                      .++|++.+.||+|+||.||++.. +++.||||++....        ....+.+.+|+.++.+++         |||++++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35678889999999999999987 58999999996432        233477899999998885         8888888


Q ss_pred             eEEEEe------------------------------CCeeEEEEecCCCCCHHHHHhc
Q 008332          526 LGFCID------------------------------SEERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       526 ~g~~~~------------------------------~~~~~lv~e~~~~GsL~~~L~~  553 (570)
                      .+++..                              ....+|||||+++|+|.+.+.+
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~  155 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT  155 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh
Confidence            887542                              5689999999999987777754

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.81  E-value=8.7e-09  Score=104.19  Aligned_cols=91  Identities=20%  Similarity=0.247  Sum_probs=76.3

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----ee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----ER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----~~  535 (570)
                      ..+|++.+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++.+++||||+++++++....     ..
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            35688999999999999999984 467899999996433 333467999999999999999999999987653     68


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++|+||++ |+|.+++...
T Consensus       106 ~iv~e~~~-~~L~~~l~~~  123 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQ  123 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHC
T ss_pred             EEEEcccC-cCHHHHHHhC
Confidence            99999997 5999999753

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.80  E-value=8.4e-09  Score=103.72  Aligned_cols=90  Identities=26%  Similarity=0.413  Sum_probs=76.0

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeC-----Cee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-----EER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  535 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||||.+.... ......+.+|+.++.+++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            35688899999999999999995 468899999996433 33346788999999999999999999988754     568


Q ss_pred             EEEEecCCCCCHHHHHhc
Q 008332          536 MLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~  553 (570)
                      ++|+||+. |+|.+++..
T Consensus        90 ~lv~e~~~-~~L~~~~~~  106 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST  106 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH
T ss_pred             EEEEeccC-ccHHHHHhh
Confidence            99999997 699999875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.79  E-value=1.2e-08  Score=103.53  Aligned_cols=89  Identities=21%  Similarity=0.273  Sum_probs=74.9

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC------e
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------E  534 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------~  534 (570)
                      .+|.+.+.||+|+||.||++.. .+++.||||++...  .....+.+.+|+.++..++||||+++++++....      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            5688899999999999999984 56889999998643  2334467899999999999999999999987654      6


Q ss_pred             eEEEEecCCCCCHHHHHhc
Q 008332          535 RMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~  553 (570)
                      .++||||++ |+|.+++..
T Consensus       105 ~~lv~e~~~-~~l~~~~~~  122 (371)
T 2xrw_A          105 VYIVMELMD-ANLCQVIQM  122 (371)
T ss_dssp             EEEEEECCS-EEHHHHHHS
T ss_pred             eEEEEEcCC-CCHHHHHhh
Confidence            899999997 589998864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.79  E-value=2e-08  Score=100.18  Aligned_cols=89  Identities=33%  Similarity=0.434  Sum_probs=69.9

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHH--HccCCCCccceeEEEEeC-----Cee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT--AKLQHVNLIRVLGFCIDS-----EER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l--~~l~h~niv~l~g~~~~~-----~~~  535 (570)
                      .++|++.+.||+|+||.||+|.. +++.||||++...   ....+..|..++  ..++||||+++++.+...     ...
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            45788899999999999999986 4899999998532   234455555554  457999999999866432     256


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++||||+++|+|.++|....
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~  107 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT  107 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC
T ss_pred             EEEEecCCCCcHHHHHhhcc
Confidence            89999999999999997643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.78  E-value=7.9e-09  Score=107.97  Aligned_cols=90  Identities=22%  Similarity=0.291  Sum_probs=74.4

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC------C
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------E  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------~  533 (570)
                      ..+|++.+.||+|+||.||++. ..+++.||||++...  .....+.+.+|+.++..++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            4678889999999999999998 456889999999643  333456789999999999999999999998654      3


Q ss_pred             eeEEEEecCCCCCHHHHHhc
Q 008332          534 ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ..++||||+++ +|.+.+..
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~  159 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM  159 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS
T ss_pred             eEEEEEeCCCC-CHHHHHhh
Confidence            57999999976 57777754

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.78  E-value=4.4e-09  Score=103.95  Aligned_cols=95  Identities=22%  Similarity=0.380  Sum_probs=80.8

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccC--CCCccceeEEEEeCCe
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQ--HVNLIRVLGFCIDSEE  534 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~--h~niv~l~g~~~~~~~  534 (570)
                      +.....+|.+.+.||+|+||.||++....++.||+|.+...  .....+.+.+|+.++.+++  |+||+++++++.....
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~  102 (313)
T 3cek_A           23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY  102 (313)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred             eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence            34445678999999999999999999777899999998633  3334567999999999996  5999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .++||| +.+|+|.+++...
T Consensus       103 ~~lv~e-~~~~~L~~~l~~~  121 (313)
T 3cek_A          103 IYMVME-CGNIDLNSWLKKK  121 (313)
T ss_dssp             EEEEEC-CCSEEHHHHHHHC
T ss_pred             EEEEEe-cCCCcHHHHHHhc
Confidence            999999 6688999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.78  E-value=1.3e-08  Score=103.81  Aligned_cols=92  Identities=27%  Similarity=0.526  Sum_probs=69.8

Q ss_pred             HhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccC-CCCccceeEEEEeCC--ee
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSE--ER  535 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~--~~  535 (570)
                      ...+|++.+.||+|+||.||++. ..+++.||+|++...  .......+.+|+.++.++. ||||+++++++...+  ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            35678999999999999999998 456889999998643  2334567889999999996 999999999998654  68


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      ++|||||+ |+|.++++..
T Consensus        87 ~lv~e~~~-~~L~~~~~~~  104 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRAN  104 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHT
T ss_pred             EEEecccC-cCHHHHHHcC
Confidence            99999998 6999999863

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.78  E-value=1.1e-09  Score=108.52  Aligned_cols=97  Identities=21%  Similarity=0.403  Sum_probs=80.7

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE  534 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~  534 (570)
                      .++....++|++.+.||+|+||.||+|....  .+|+|.+....  ....+.|.+|+.++.+++||||+++++++.....
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  103 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH  103 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence            3444556788999999999999999998653  49999986322  2233567889999999999999999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .++|+||+++|+|.+++....
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~  124 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAK  124 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSC
T ss_pred             eEEEeecccCCcHHHHHHhcC
Confidence            999999999999999998643

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.77  E-value=1.6e-09  Score=116.68  Aligned_cols=92  Identities=25%  Similarity=0.416  Sum_probs=76.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEe------CCee
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCID------SEER  535 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~------~~~~  535 (570)
                      .+|.+.+.||+|+||.||++.. .+++.||||.+... .....+.|.+|+.++.+++||||+++++++..      ....
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            5688899999999999999984 56889999998643 33445679999999999999999999998754      5677


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++||||+++|+|.+++....
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~  113 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFE  113 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSS
T ss_pred             EEEEEeCCCCCHHHHHHhcc
Confidence            99999999999999998643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.77  E-value=3.6e-09  Score=107.59  Aligned_cols=91  Identities=18%  Similarity=0.228  Sum_probs=71.6

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecC---CCcccHHHHHHHH---HHHHccCCCCcccee-------EE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK---TSTQGFEEFKNEV---MLTAKLQHVNLIRVL-------GF  528 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~---~~~~~~~~f~~e~---~~l~~l~h~niv~l~-------g~  528 (570)
                      ..+|.+.+.||+|+||.||+|. ..+++.||||++..   ......+.|.+|+   ..+.+++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            3568888999999999999999 46689999999963   2334457899999   555566899999998       55


Q ss_pred             EEeCC-----------------eeEEEEecCCCCCHHHHHhcC
Q 008332          529 CIDSE-----------------ERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       529 ~~~~~-----------------~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      +..++                 ..++||||+ +|+|.++|...
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~  193 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL  193 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHH
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhc
Confidence            55442                 278999999 68999999853

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.77  E-value=2.2e-08  Score=98.04  Aligned_cols=89  Identities=19%  Similarity=0.319  Sum_probs=76.9

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ..+|.+.+.||+|+||.||++. ..+++.||+|.+.....  .+.+.+|+.++..+ +|+|++++++++......++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            3568889999999999999999 46688999999854322  23578899999999 89999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+ +|+|.+++...
T Consensus        87 ~~-~~~L~~~l~~~   99 (298)
T 1csn_A           87 LL-GPSLEDLLDLC   99 (298)
T ss_dssp             CC-CCBHHHHHHHT
T ss_pred             ec-CCCHHHHHHHh
Confidence            99 99999999864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.77  E-value=5.5e-09  Score=104.87  Aligned_cols=100  Identities=14%  Similarity=0.179  Sum_probs=72.9

Q ss_pred             hcCcccceeeeccCCccEEEEEec----CCcEEEEEEecCCCcc-----------cHHHHHHHHHHHHccCCCCccceeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTSTQ-----------GFEEFKNEVMLTAKLQHVNLIRVLG  527 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~l~~~~~~-----------~~~~f~~e~~~l~~l~h~niv~l~g  527 (570)
                      ..+|.+.+.||+|+||.||+|...    .+..+|+|.+......           ....+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            356888999999999999999964    5678999998643221           1124678889999999999999999


Q ss_pred             EEEe----CCeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          528 FCID----SEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       528 ~~~~----~~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++..    ....++||||+ +|+|.+++....    .+++.+++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~  154 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVL  154 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHH
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHH
Confidence            9988    67899999999 999999997533    45555443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.77  E-value=1.1e-08  Score=103.81  Aligned_cols=90  Identities=24%  Similarity=0.363  Sum_probs=75.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCee----
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER----  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~----  535 (570)
                      ..+|...+.||+|+||.||++.. .+++.||+|.+....  ....+.+.+|+.++.+++||||+++++++......    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            35788889999999999999984 568899999996432  23346789999999999999999999999876654    


Q ss_pred             --EEEEecCCCCCHHHHHhc
Q 008332          536 --MLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       536 --~lv~e~~~~GsL~~~L~~  553 (570)
                        ++||||+. |+|.+++..
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~  139 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGM  139 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTS
T ss_pred             eEEEEEcccc-ccHHHHhhc
Confidence              99999997 699988754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.76  E-value=8.5e-09  Score=112.74  Aligned_cols=93  Identities=20%  Similarity=0.189  Sum_probs=78.8

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeE
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  536 (570)
                      ...+|.+.++||+|+||.||++.. .+++.||||+++..   .....+.+..|..++..+ +||+|+++.+++...+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            456799999999999999999994 55889999998632   123345688899999988 7999999999998889999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      |||||+++|+|.++|...
T Consensus       419 lV~E~~~gg~L~~~l~~~  436 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV  436 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH
T ss_pred             EEEeCcCCCcHHHHHHhc
Confidence            999999999999999864

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.76  E-value=2.1e-08  Score=103.70  Aligned_cols=90  Identities=21%  Similarity=0.212  Sum_probs=74.6

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ..+|...++||+|+||.|+.....+++.||||++......   .+.+|+.++.++ +||||+++++.+......++||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            3458888999999999976555566899999999643322   356899999999 899999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCC
Q 008332          542 MPNKSLDCYLFGLSH  556 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~  556 (570)
                      |+ |+|.+++.....
T Consensus       100 ~~-g~L~~~l~~~~~  113 (432)
T 3p23_A          100 CA-ATLQEYVEQKDF  113 (432)
T ss_dssp             CS-EEHHHHHHSSSC
T ss_pred             CC-CCHHHHHHhcCC
Confidence            96 699999986553

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.76  E-value=4e-09  Score=104.18  Aligned_cols=95  Identities=27%  Similarity=0.386  Sum_probs=70.4

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcc------cHHHHHHHHHHHHcc----CCCCccceeEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQ------GFEEFKNEVMLTAKL----QHVNLIRVLGF  528 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~------~~~~f~~e~~~l~~l----~h~niv~l~g~  528 (570)
                      .....+|.+.+.||+|+||.||++.. .+++.||+|.+......      ....+.+|+.++.++    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            34456799999999999999999984 56889999999643221      123466789999888    89999999999


Q ss_pred             EEeCCeeEEEEec-CCCCCHHHHHhcC
Q 008332          529 CIDSEERMLIYEY-MPNKSLDCYLFGL  554 (570)
Q Consensus       529 ~~~~~~~~lv~e~-~~~GsL~~~L~~~  554 (570)
                      +...+..++|+|+ +++|+|.+++...
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~  133 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEK  133 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHH
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhc
Confidence            9888899999999 8999999999863

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.76  E-value=1.4e-08  Score=100.78  Aligned_cols=93  Identities=25%  Similarity=0.446  Sum_probs=73.1

Q ss_pred             HhcCcccceeeeccCCccEEEEEe--cCCcEEEEEEecCCC--cccHHHHHHHHHHHHcc---CCCCccceeEEEE----
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKL---QHVNLIRVLGFCI----  530 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~--~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l---~h~niv~l~g~~~----  530 (570)
                      ...+|++.+.||+|+||.||++..  .+++.||+|.++...  ......+.+|+.++..+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            346789999999999999999996  457899999985321  12223566777777665   8999999999987    


Q ss_pred             -eCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          531 -DSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       531 -~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                       .....++|+||++ |+|.+++....
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~  113 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVP  113 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcc
Confidence             3457899999998 69999998643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.76  E-value=1.2e-08  Score=101.42  Aligned_cols=89  Identities=21%  Similarity=0.365  Sum_probs=72.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHH-HHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVM-LTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      .++|...+.||+|+||.||++.. .+++.||||.+.... ......+..|+. ++..++||||+++++++...+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            35688889999999999999995 468899999996443 233445666666 667789999999999999999999999


Q ss_pred             ecCCCCCHHHHHh
Q 008332          540 EYMPNKSLDCYLF  552 (570)
Q Consensus       540 e~~~~GsL~~~L~  552 (570)
                      ||+++ +|.+++.
T Consensus       101 e~~~~-~l~~~~~  112 (327)
T 3aln_A          101 ELMST-SFDKFYK  112 (327)
T ss_dssp             CCCSE-EHHHHHH
T ss_pred             eecCC-ChHHHHH
Confidence            99985 8888876

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.75  E-value=2.3e-08  Score=103.67  Aligned_cols=87  Identities=20%  Similarity=0.079  Sum_probs=72.5

Q ss_pred             cccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +...+.||+|+||.||.+...+|+.||||++...   ..+.+.+|+.++.++ +||||+++++.+......++||||++ 
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            4556889999999998766667999999998532   345678999999886 89999999999998999999999995 


Q ss_pred             CCHHHHHhcCCC
Q 008332          545 KSLDCYLFGLSH  556 (570)
Q Consensus       545 GsL~~~L~~~~~  556 (570)
                      |+|.+++.....
T Consensus        93 gsL~~~l~~~~~  104 (434)
T 2rio_A           93 LNLQDLVESKNV  104 (434)
T ss_dssp             EEHHHHHHTC--
T ss_pred             CCHHHHHhccCC
Confidence            699999986543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.75  E-value=1.1e-08  Score=103.24  Aligned_cols=94  Identities=21%  Similarity=0.322  Sum_probs=64.4

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCe-
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE-  534 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~-  534 (570)
                      .......++|++.+.||+|+||.||++.. .+++.||||++.... .....+.+++..+..++||||+++++++..... 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            34566678899999999999999999995 568899999885432 222356778888889999999999999876433 


Q ss_pred             ------eEEEEecCCCCCHHHHHh
Q 008332          535 ------RMLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       535 ------~~lv~e~~~~GsL~~~L~  552 (570)
                            .++||||+++ +|.+.+.
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~  117 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCR  117 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHH
T ss_pred             cccceeEEEEeecccc-cHHHHHH
Confidence                  7899999986 6666554

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.75  E-value=6.2e-09  Score=104.77  Aligned_cols=96  Identities=15%  Similarity=0.191  Sum_probs=75.8

Q ss_pred             cCcccceeeeccCCccEEEEEec---------CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccc----------
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP---------CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR----------  524 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~---------~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~----------  524 (570)
                      ++|.+.+.||+|+||.||++...         .++.||+|.+...     +.+.+|+.++.+++||||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            56888999999999999999954         3788999998643     35789999999999999987          


Q ss_pred             -----eeEEEEe-CCeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          525 -----VLGFCID-SEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       525 -----l~g~~~~-~~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                           +++.+.. ....++||||+ +|+|.++|....  ...+++.+++
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~  162 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVL  162 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHH
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHH
Confidence                 6777776 67889999999 999999998642  2345555443

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.74  E-value=8.3e-09  Score=104.41  Aligned_cols=90  Identities=27%  Similarity=0.373  Sum_probs=67.8

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC------C
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------E  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------~  533 (570)
                      ..+|++.+.||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.++..++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            3678889999999999999998 456889999999643  223456788999999999999999999998754      4


Q ss_pred             eeEEEEecCCCCCHHHHHhc
Q 008332          534 ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ..++|+|++ +++|.+++..
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~  126 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC  126 (367)
T ss_dssp             CCEEEEECC-CEECC-----
T ss_pred             eEEEEeccc-CCCHHHHHhc
Confidence            579999999 6899999875

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.74  E-value=3.4e-08  Score=102.16  Aligned_cols=91  Identities=16%  Similarity=0.250  Sum_probs=75.7

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHcc------CCCCccceeEEEEeCCee
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL------QHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l------~h~niv~l~g~~~~~~~~  535 (570)
                      ..+|.+.+.||+|+||.||+|.. .+++.||||+++.. ......+.+|+.++..+      +|+||+++++.+......
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            35688999999999999999984 45889999999642 23345677888888776      577999999999999999


Q ss_pred             EEEEecCCCCCHHHHHhcCC
Q 008332          536 MLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ++||||+. |+|.+++....
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~  193 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNK  193 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTT
T ss_pred             EEEEeccC-CCHHHHHHhcc
Confidence            99999996 69999998654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.73  E-value=3.1e-08  Score=98.89  Aligned_cols=98  Identities=18%  Similarity=0.205  Sum_probs=71.6

Q ss_pred             hcCcccc-eeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHH-HHHHccCCCCccceeEEEEe----CCee
Q 008332          463 TERFSIR-NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEV-MLTAKLQHVNLIRVLGFCID----SEER  535 (570)
Q Consensus       463 ~~~~~~~-~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~-~~l~~l~h~niv~l~g~~~~----~~~~  535 (570)
                      .++|.+. ++||+|+||.||++.. .+++.||+|++....     ...+|+ ..+..++||||+++++++..    ....
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            3567774 5799999999999995 468999999985421     222333 33556799999999999876    3458


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          536 MLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++||||+++|+|.+++.....  ..+++.+++
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~  131 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGD--QAFTEREAA  131 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-C--CCCBHHHHH
T ss_pred             EEEEeccCCCCHHHHHHhcCC--CCCCHHHHH
Confidence            999999999999999986432  334544443

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.72  E-value=1.3e-08  Score=102.41  Aligned_cols=89  Identities=25%  Similarity=0.359  Sum_probs=74.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCe------
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE------  534 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~------  534 (570)
                      .+|...+.||+|+||.||++.. .+|+.||||.+....  ......+.+|+.++.+++||||+++++++.....      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            5688889999999999999994 568899999996432  2334678999999999999999999999877653      


Q ss_pred             eEEEEecCCCCCHHHHHhc
Q 008332          535 RMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~  553 (570)
                      .++||||+. |+|.+++..
T Consensus       104 ~~lv~e~~~-~~l~~~~~~  121 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMGL  121 (353)
T ss_dssp             CEEEEECCS-EEGGGTTTS
T ss_pred             EEEEecccc-CCHHHHhcC
Confidence            499999997 699888753

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.71  E-value=1.4e-08  Score=102.72  Aligned_cols=101  Identities=17%  Similarity=0.243  Sum_probs=74.9

Q ss_pred             hcCcccceeeeccCCccEEEEEecC------CcEEEEEEecCCCcccH-----------HHHHHHHHHHHccCCCCccce
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPC------GEVIAVKKLSKTSTQGF-----------EEFKNEVMLTAKLQHVNLIRV  525 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~------~~~vavK~l~~~~~~~~-----------~~f~~e~~~l~~l~h~niv~l  525 (570)
                      ..+|.+.+.||+|+||.||+|....      ++.||||.+........           ..+..|+..+..++||||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            4578899999999999999998643      46899999864432111           124456667778899999999


Q ss_pred             eEEEEeC----CeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          526 LGFCIDS----EERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       526 ~g~~~~~----~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++++...    ...+|||||+ +|+|.+++....   ..+++.+++
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~  155 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVL  155 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHH
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHH
Confidence            9998765    4589999999 999999998642   234554443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.69  E-value=2.7e-08  Score=101.69  Aligned_cols=90  Identities=16%  Similarity=0.271  Sum_probs=73.5

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC--------CCCccceeEEEE---
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ--------HVNLIRVLGFCI---  530 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~--------h~niv~l~g~~~---  530 (570)
                      ..+|.+.+.||+|+||.||++. ..+++.||+|++... ....+.+.+|+.++.+++        |+||+++++.+.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            3678999999999999999998 456889999999633 334567889999999885        788999999987   


Q ss_pred             -eCCeeEEEEecCCCCCHHHHHhcC
Q 008332          531 -DSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       531 -~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                       .....++||||+ +|+|.+++...
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~  138 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKS  138 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHT
T ss_pred             CCCceEEEEEecc-CccHHHHHHhc
Confidence             345789999999 66787777654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.69  E-value=4.1e-08  Score=97.82  Aligned_cols=91  Identities=20%  Similarity=0.353  Sum_probs=76.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe--cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCC------ccceeEEEEeCCe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN------LIRVLGFCIDSEE  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~--~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~n------iv~l~g~~~~~~~  534 (570)
                      ..+|++.+.||+|+||.||++..  .+++.||+|.++.. ....+.+.+|+.++..++|++      ++++++.+...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            35788899999999999999985  35789999999643 233467889999998887665      9999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .++||||+ +|+|.+++....
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~  111 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENG  111 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT
T ss_pred             EEEEEcCC-CCCHHHHHHhcC
Confidence            99999999 889999998643

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.66  E-value=2e-08  Score=103.66  Aligned_cols=85  Identities=26%  Similarity=0.459  Sum_probs=67.8

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC----C--eeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS----E--ERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~----~--~~~  536 (570)
                      .+|...+.||+|+||.||++.. .+++.||||++.....    .+.+|+.+|.+++||||+++++++...    +  ..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            3578889999999999999996 4589999999854322    234799999999999999999988653    1  367


Q ss_pred             EEEecCCCCCHHHHHhc
Q 008332          537 LIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~  553 (570)
                      +||||+++ +|.+.+..
T Consensus       130 lv~e~~~~-~l~~~~~~  145 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARH  145 (420)
T ss_dssp             EEEECCCE-EHHHHHHH
T ss_pred             eehhcccc-cHHHHHHH
Confidence            99999986 67776653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.66  E-value=8.8e-08  Score=93.54  Aligned_cols=89  Identities=20%  Similarity=0.378  Sum_probs=73.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEE-EeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC-IDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e  540 (570)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+......  ..+.+|+.++..++|++++..+..+ ......++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            35788999999999999999994 66889999998643322  3588999999999998877777666 45567899999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+ +|+|.+++...
T Consensus        86 ~~-~~~L~~~~~~~   98 (296)
T 3uzp_A           86 LL-GPSLEDLFNFC   98 (296)
T ss_dssp             CC-CCBHHHHHHHT
T ss_pred             ec-CCCHHHHHHhh
Confidence            99 99999999854

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.62  E-value=1e-07  Score=92.95  Aligned_cols=89  Identities=20%  Similarity=0.378  Sum_probs=70.3

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEE-EeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC-IDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e  540 (570)
                      .++|++.+.||+|+||.||++.. .+++.||+|.+......  ..+.+|+.++..++|++++..++.+ ......++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            46789999999999999999994 66889999987533221  3478899999999988888777766 45678899999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      |+ +|+|.+++...
T Consensus        86 ~~-~~~L~~~~~~~   98 (296)
T 4hgt_A           86 LL-GPSLEDLFNFC   98 (296)
T ss_dssp             CC-CCBHHHHHHHT
T ss_pred             cc-CCCHHHHHHHh
Confidence            99 99999999854

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.61  E-value=7.3e-08  Score=98.88  Aligned_cols=81  Identities=25%  Similarity=0.349  Sum_probs=63.3

Q ss_pred             ceeeeccCCccEEEEEec---CCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEe--CCeeEEEEecCC
Q 008332          469 RNKLGEGGYGPVYKGVLP---CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID--SEERMLIYEYMP  543 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~---~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e~~~  543 (570)
                      .++||+|+||.||+|...   .++.||+|.+.....  ...+.+|+.++.+++||||+++++++..  ....++||||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            468999999999999954   477899999964322  2468899999999999999999999976  568899999997


Q ss_pred             CCCHHHHHh
Q 008332          544 NKSLDCYLF  552 (570)
Q Consensus       544 ~GsL~~~L~  552 (570)
                       |+|.+++.
T Consensus       104 -~~l~~~~~  111 (405)
T 3rgf_A          104 -HDLWHIIK  111 (405)
T ss_dssp             -EEHHHHHH
T ss_pred             -CCHHHHHH
Confidence             58988886

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.61  E-value=5.6e-08  Score=98.42  Aligned_cols=91  Identities=15%  Similarity=0.256  Sum_probs=75.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-----------CCCccceeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-----------HVNLIRVLGFCI  530 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-----------h~niv~l~g~~~  530 (570)
                      ..+|.+.+.||+|+||.||++.. .+++.||||.+... ......+.+|+.++.+++           ||||+++++.+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35688999999999999999994 56889999999632 233467889999998876           899999999987


Q ss_pred             eCC----eeEEEEecCCCCCHHHHHhcCC
Q 008332          531 DSE----ERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       531 ~~~----~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ...    ..++||||+ +|+|.+++....
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~  124 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYE  124 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhh
Confidence            654    689999999 899999998643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.60  E-value=4.8e-08  Score=99.86  Aligned_cols=84  Identities=19%  Similarity=0.349  Sum_probs=66.3

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCe------eEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE------RML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~------~~l  537 (570)
                      .+|...+.||+|+||.||++....+..+|+|++......    ..+|+.++..++||||+++++++.....      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            458888999999999999999766777999988533221    2379999999999999999999876543      789


Q ss_pred             EEecCCCCCHHHHHh
Q 008332          538 IYEYMPNKSLDCYLF  552 (570)
Q Consensus       538 v~e~~~~GsL~~~L~  552 (570)
                      ||||++++ |...+.
T Consensus       116 v~e~~~~~-l~~~~~  129 (394)
T 4e7w_A          116 VLEYVPET-VYRASR  129 (394)
T ss_dssp             EEECCSEE-HHHHHH
T ss_pred             EeeccCcc-HHHHHH
Confidence            99999874 444443

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.56  E-value=9.2e-08  Score=94.47  Aligned_cols=89  Identities=17%  Similarity=0.268  Sum_probs=63.4

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc-ccH-HHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST-QGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~-~~~-~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ..+|+..+.||+|+||.||++.. .+++.||||.+..... ... +.+.++..++..++||||+++++++...+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            35688889999999999999995 4688999999964332 222 33445555778889999999999999999999999


Q ss_pred             ecCCCCCHHHHHh
Q 008332          540 EYMPNKSLDCYLF  552 (570)
Q Consensus       540 e~~~~GsL~~~L~  552 (570)
                      ||+ ++.+..++.
T Consensus       104 e~~-~~~~~~l~~  115 (318)
T 2dyl_A          104 ELM-GTCAEKLKK  115 (318)
T ss_dssp             CCC-SEEHHHHHH
T ss_pred             ecc-CCcHHHHHH
Confidence            999 445555544

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.56  E-value=3.4e-08  Score=97.90  Aligned_cols=95  Identities=24%  Similarity=0.390  Sum_probs=77.6

Q ss_pred             HHHhcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcc------cHHHHHHHHHHHHccC--CCCccceeEEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQ------GFEEFKNEVMLTAKLQ--HVNLIRVLGFCI  530 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~------~~~~f~~e~~~l~~l~--h~niv~l~g~~~  530 (570)
                      .....+|++.+.||+|+||.||++. ..+++.||||.+......      ....+.+|+.++.+++  |+||+++++.+.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            3345678999999999999999998 456889999998532211      1235678999999995  599999999999


Q ss_pred             eCCeeEEEEecCCC-CCHHHHHhcC
Q 008332          531 DSEERMLIYEYMPN-KSLDCYLFGL  554 (570)
Q Consensus       531 ~~~~~~lv~e~~~~-GsL~~~L~~~  554 (570)
                      ..+..++|+|++.+ ++|.+++...
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~  143 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITER  143 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHH
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhcc
Confidence            99999999999976 8999999853

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.56  E-value=1.6e-07  Score=95.56  Aligned_cols=92  Identities=20%  Similarity=0.267  Sum_probs=75.3

Q ss_pred             HhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-CC-----CccceeEEEEeCCe
Q 008332          462 ATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HV-----NLIRVLGFCIDSEE  534 (570)
Q Consensus       462 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~-----niv~l~g~~~~~~~  534 (570)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||+++.. ......+.+|+.++..++ |+     +++++.+.+.....
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            346789999999999999999984 46789999999632 233456778888888774 44     49999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .++||||++ |+|.++|....
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~  150 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTN  150 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTT
T ss_pred             eEEEEecCC-CCHHHHHhhcC
Confidence            999999996 59999998654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.54  E-value=1.4e-07  Score=95.64  Aligned_cols=90  Identities=14%  Similarity=0.120  Sum_probs=60.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHHcc--CCCCcccee-------EEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKL--QHVNLIRVL-------GFCI  530 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l--~h~niv~l~-------g~~~  530 (570)
                      ..|...+.||+|+||.||++.. .+++.||+|++.....   ...+.+.+|+.++..+  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            4478889999999999999994 5688999999975432   2345677885444444  799977644       4544


Q ss_pred             eC-----------------CeeEEEEecCCCCCHHHHHhcC
Q 008332          531 DS-----------------EERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       531 ~~-----------------~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .+                 ...++||||++ |+|.++|...
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  181 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL  181 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence            33                 23799999999 8999999853

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.53  E-value=1e-07  Score=101.32  Aligned_cols=84  Identities=12%  Similarity=0.141  Sum_probs=63.2

Q ss_pred             ceeeeccCCccEEEEEecCCcEEEEEEecCCCc--c------cHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          469 RNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST--Q------GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~--~------~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .+.||+|+||.||++... ++.+++|.......  .      ..+.|.+|+.++.+++||||+++...+...+..+||||
T Consensus       341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            578999999999999644 78899998643211  1      13458999999999999999977777778888899999


Q ss_pred             cCCCCCHHHHHhc
Q 008332          541 YMPNKSLDCYLFG  553 (570)
Q Consensus       541 ~~~~GsL~~~L~~  553 (570)
                      |+++|+|.++|..
T Consensus       420 ~~~ggsL~~~l~~  432 (540)
T 3en9_A          420 YINGKLAKDVIED  432 (540)
T ss_dssp             CCCSEEHHHHSTT
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999999875

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.53  E-value=1.8e-07  Score=93.90  Aligned_cols=100  Identities=19%  Similarity=0.254  Sum_probs=78.1

Q ss_pred             hcCcccceeeeccCCccEEEEEec-CC-cEEEEEEecCCCcccHHHHHHHHHHHHccCCCC------ccceeEEEEeCCe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLP-CG-EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN------LIRVLGFCIDSEE  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~-~~-~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~n------iv~l~g~~~~~~~  534 (570)
                      .++|.+.+.||+|+||.||++... .+ +.||+|.++.. ....+.+.+|+.++.+++|++      ++.+.+.+.....
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            357889999999999999999953 34 68999999633 234467889999999987766      8899999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          535 RMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      .++||||+ +|+|.+++.....  ..+++.++
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~  125 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKENNF--QPYPLPHV  125 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTT--CCCCHHHH
T ss_pred             EEEEEecc-CCChHHHHHhccC--CCCCHHHH
Confidence            99999999 6788888876432  23444443

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.53  E-value=2.6e-07  Score=96.69  Aligned_cols=98  Identities=20%  Similarity=0.338  Sum_probs=75.4

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCC-CCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH-VNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|.+.+.||+|+||.||+|.. .+++.||||.+......  ..+.+|+.++..++| +++..+..++......+|||||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            5688899999999999999994 66899999987533222  347899999999977 5555565666777889999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      + +|+|.+++.....   .+++.+++
T Consensus        85 ~-g~sL~~ll~~~~~---~l~~~~~~  106 (483)
T 3sv0_A           85 L-GPSLEDLFNFCSR---KLSLKTVL  106 (483)
T ss_dssp             C-CCBHHHHHHHTTT---CCCHHHHH
T ss_pred             C-CCCHHHHHHhhcC---CCCHHHHH
Confidence            9 9999999985332   34544443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.45  E-value=2.9e-07  Score=89.32  Aligned_cols=87  Identities=21%  Similarity=0.132  Sum_probs=66.8

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCc------------------ccHHHHHHHHHHHHccCCC
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST------------------QGFEEFKNEVMLTAKLQHV  520 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~------------------~~~~~f~~e~~~l~~l~h~  520 (570)
                      +......+.+.+.||+|+||.||+|...+|+.||+|.++....                  .....+.+|+.+|.+++  
T Consensus        85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--  162 (282)
T 1zar_A           85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--  162 (282)
T ss_dssp             HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence            3444455667799999999999999987789999999863221                  12456899999999998  


Q ss_pred             CccceeEEEEeCCeeEEEEecCCCCCHHH
Q 008332          521 NLIRVLGFCIDSEERMLIYEYMPNKSLDC  549 (570)
Q Consensus       521 niv~l~g~~~~~~~~~lv~e~~~~GsL~~  549 (570)
                      | +++.+.+ ..+..++||||+++|+|.+
T Consensus       163 ~-~~v~~~~-~~~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          163 G-LAVPKVY-AWEGNAVLMELIDAKELYR  189 (282)
T ss_dssp             T-SSSCCEE-EEETTEEEEECCCCEEGGG
T ss_pred             C-CCcCeEE-eccceEEEEEecCCCcHHH
Confidence            4 5666644 3356699999999999998

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.23  E-value=9.9e-07  Score=94.26  Aligned_cols=85  Identities=18%  Similarity=0.106  Sum_probs=61.9

Q ss_pred             eeeeccCCccEEEEE-ecCCcEEEEEEecCCC----------cccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEE
Q 008332          470 NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS----------TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~----------~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  537 (570)
                      ...+.|++|.+..+. +-.|+.+++|.+....          ....++|.+|+.+|.++ .|+||+++++++.+....||
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            344556666555444 3458889999985321          12245799999999999 79999999999999999999


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      ||||++||+|.++|...
T Consensus       320 VMEyv~G~~L~d~i~~~  336 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAAG  336 (569)
T ss_dssp             EEECCCSEEHHHHHHTT
T ss_pred             EEecCCCCcHHHHHHhC
Confidence            99999999999999864

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.82  E-value=2.2e-05  Score=74.79  Aligned_cols=83  Identities=13%  Similarity=0.112  Sum_probs=59.8

Q ss_pred             cccceeeeccCCccEEEEEe-cCCcE--EEEEEecCCCcc------------------------cHHHHHHHHHHHHccC
Q 008332          466 FSIRNKLGEGGYGPVYKGVL-PCGEV--IAVKKLSKTSTQ------------------------GFEEFKNEVMLTAKLQ  518 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~-~~~~~--vavK~l~~~~~~------------------------~~~~f~~e~~~l~~l~  518 (570)
                      +.+.+.||+|+||.||+|.. .+|+.  ||||.++.....                        ....+.+|+..+.++.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999996 67888  999987532111                        0135889999999998


Q ss_pred             CCCc--cceeEEEEeCCeeEEEEecCCC-C----CHHHHHh
Q 008332          519 HVNL--IRVLGFCIDSEERMLIYEYMPN-K----SLDCYLF  552 (570)
Q Consensus       519 h~ni--v~l~g~~~~~~~~~lv~e~~~~-G----sL~~~L~  552 (570)
                      |+++  ..++..    ...+|||||+.+ |    +|.+++.
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~  165 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR  165 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh
Confidence            8864  333321    356899999942 4    7777654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.62  E-value=4.7e-05  Score=77.99  Aligned_cols=56  Identities=18%  Similarity=0.153  Sum_probs=45.3

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQH  519 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h  519 (570)
                      ..+...++||+|+||.||++. ..+|+.||||++.....   ...+.|.+|+.++..++|
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            447778999999999999999 56789999999873222   235679999999999977

>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*

Probab=97.55  E-value=0.00012  Score=77.39  Aligned_cols=84  Identities=10%  Similarity=0.108  Sum_probs=60.8

Q ss_pred             HHHHHHHhhCCCceEEEEEcC-CCCC--Ccccccccc-cChHHHHHHHHHHHHHHHHcCCCceeeeccCC-CCCCCccch
Q 008332           78 KFADTVKKKNPSITTILSIGQ-GKDT--NYSIYSSMV-RNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP-NTSTDMFNI  152 (570)
Q Consensus        78 ~~~~~lk~~~~~~kvllsigg-~~~~--~~~~f~~~~-~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p-~~~~~~~~~  152 (570)
                      ..++.++++  |++|+-.+.- |...  .......++ ++++.+..+|+.++++++.|||||+-||+|.+ ...++..++
T Consensus       113 ~widaAHrn--GV~VlGt~~fe~~~~gg~~~~~~~lL~~~~~~~~~~a~kLv~~a~~yGFDGw~IN~E~~~~~~~~~~~l  190 (626)
T 2vtf_A          113 DVIDASHRN--GVPILGNVFFPPTVYGGQLEWLEQMLEQEEDGSFPLADKLLEVADYYGFDGWFINQQTEGADEGTAEAM  190 (626)
T ss_dssp             HHHHHHHHT--TCCEEEEEEECCGGGTCCHHHHHHHTCCCTTCCCHHHHHHHHHHHHHTCCEEEEEECCTTCCHHHHHHH
T ss_pred             HHHHHHHHc--CCEEEEEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHHHHHHhCCCceEEeeccccCCHHHHHHH
Confidence            345556665  7999965541 1111  113356677 67777889999999999999999999999974 344567789


Q ss_pred             hhhHHHHHHHH
Q 008332          153 GLLFDEWRIAA  163 (570)
Q Consensus       153 ~~l~~~lr~~l  163 (570)
                      ..|+++|++..
T Consensus       191 ~~F~~~L~~~~  201 (626)
T 2vtf_A          191 QAFLVYLQEQK  201 (626)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHHhC
Confidence            99999988654

>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A*

Probab=97.45  E-value=9.5e-05  Score=78.52  Aligned_cols=159  Identities=9%  Similarity=0.049  Sum_probs=100.0

Q ss_pred             HHHHHHHhhCCCceEEEEEcC-CCCC--Ccccccccc-cChHHHHHHHHHHHHHHHHcCCCceeeeccCC--CCCCCccc
Q 008332           78 KFADTVKKKNPSITTILSIGQ-GKDT--NYSIYSSMV-RNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP--NTSTDMFN  151 (570)
Q Consensus        78 ~~~~~lk~~~~~~kvllsigg-~~~~--~~~~f~~~~-~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p--~~~~~~~~  151 (570)
                      ..++.++++  |++|+-.+-- |...  .......++ ++.+.+..+|+.++++++.|||||+-||+|..  ...++..+
T Consensus       105 ~widaAHrn--GV~VlGT~~fe~~~~~~~~~~~~~lL~~~~~~~~~~a~kLv~la~~yGFDGw~IN~E~~~~~~~~~~~~  182 (653)
T 2w91_A          105 DVIDAGHRN--GVPVYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYGYDGYFINQETTGDLVKPLGEK  182 (653)
T ss_dssp             HHHHHHHHT--TCCEEEEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHHHHTCCEEEEEEEECSTTTGGGHHH
T ss_pred             HHHHHHHHC--CCEEEEEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHHHHHHhCCCceEEeecccCCCCHHHHHH
Confidence            355556665  7999955531 1110  112355667 57788889999999999999999999999974  35567889


Q ss_pred             hhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCC
Q 008332          152 IGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSI  231 (570)
Q Consensus       152 ~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~  231 (570)
                      +..|+++|++.+++.      ..+..++                        |..-|+++..-.|.+.....+.+.+...
T Consensus       183 l~~F~~~L~~~~~~~------~~~~~v~------------------------WYDs~t~~G~l~wQn~Ln~~N~~ff~~~  232 (653)
T 2w91_A          183 MRQFMLYSKEYAAKV------NHPIKYS------------------------WYDAMTYNYGRYHQDGLGEYNYQFMQPE  232 (653)
T ss_dssp             HHHHHHHHHHHHHHT------TCCCEEE------------------------EESCBCSSSSBCCCSSSCTTTGGGTCCB
T ss_pred             HHHHHHHHHHHHhcc------CCCcEEE------------------------EeeccccCCcEeecccccHhHHHHHhcc
Confidence            999999999988731      0011111                        1222333322234444444444444431


Q ss_pred             ------CCC--C----ccCHHHHHHHHHHcCCCCCceeeeccccc-ccee
Q 008332          232 ------SGR--F----ARSTDQVLKAWIERGLSADKLVMCLPFYG-YAWT  268 (570)
Q Consensus       232 ------~~~--~----~~~v~~~v~~~~~~gvp~~KlvlGip~yG-~~~~  268 (570)
                            ...  +    ....+..++..-..|.++..|-+||=..| +.|.
T Consensus       233 ~~~~~~D~~FlNY~W~~~~l~~S~~~A~~~g~~~~dvy~GiDV~gggg~~  282 (653)
T 2w91_A          233 GDKVPADNFFANFNWDKAKNDYTIATANWIGRNPYDVFAGLELQQGGSYK  282 (653)
T ss_dssp             TTBCSCSEEEECSCCCHHHHHHHHHHHHHHTCCGGGEEEEEEHHHHTGGG
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHHhCCCHHHEEEEEEEecCCCCC
Confidence                  111  0    11456666666677899999999999998 7664

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.45  E-value=5.2e-05  Score=75.89  Aligned_cols=84  Identities=8%  Similarity=0.057  Sum_probs=53.5

Q ss_pred             cccceeeeccCCccEEEEEecCCcEEEEEEecCCCc--------------ccHHHH--------HHHHHHHHccCCCCcc
Q 008332          466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST--------------QGFEEF--------KNEVMLTAKLQHVNLI  523 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~--------------~~~~~f--------~~e~~~l~~l~h~niv  523 (570)
                      +.+...||+|+||.||+|...+|+.||||+++....              .....+        .+|...|.++.+.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            778899999999999999987899999998752110              011122        2345555555433332


Q ss_pred             ceeEEEEeCCeeEEEEecCCCCCHHHHH
Q 008332          524 RVLGFCIDSEERMLIYEYMPNKSLDCYL  551 (570)
Q Consensus       524 ~l~g~~~~~~~~~lv~e~~~~GsL~~~L  551 (570)
                      ...-+..  ...+|||||++++.|..++
T Consensus       177 vp~p~~~--~~~~LVME~i~G~~L~~l~  202 (397)
T 4gyi_A          177 VPEPIAQ--SRHTIVMSLVDALPMRQVS  202 (397)
T ss_dssp             CCCEEEE--ETTEEEEECCSCEEGGGCC
T ss_pred             CCeeeec--cCceEEEEecCCccHhhhc
Confidence            1111111  1236999999998887654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.77  E-value=0.0036  Score=59.30  Aligned_cols=91  Identities=14%  Similarity=0.020  Sum_probs=70.7

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEE
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ......+.....++.|+.+.||+.... ++.+++|..+.........+.+|+.++..+ .|.++.++++.+...+..++|
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence            334456777788888888999999855 688999998642212223588999999988 467788899988888899999


Q ss_pred             EecCCCCCHHHHH
Q 008332          539 YEYMPNKSLDCYL  551 (570)
Q Consensus       539 ~e~~~~GsL~~~L  551 (570)
                      |||+++.+|.+.+
T Consensus        89 ~e~i~G~~l~~~~  101 (263)
T 3tm0_A           89 MSEADGVLCSEEY  101 (263)
T ss_dssp             EECCSSEEHHHHC
T ss_pred             EEecCCeehhhcc
Confidence            9999999998763

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=95.46  E-value=0.011  Score=55.51  Aligned_cols=80  Identities=15%  Similarity=0.145  Sum_probs=58.2

Q ss_pred             cccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCC--ccceeEEEEeCCeeEEEEecCC
Q 008332          466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       466 ~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~n--iv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      +.+..+.+.|..+.||+....+|..+++|.....   ....+.+|+.++..+.+.+  +.++++.....+..++||||++
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             CceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            4443333466678999998766788999987543   1235778999888885444  4568887777777899999999


Q ss_pred             CCCHH
Q 008332          544 NKSLD  548 (570)
Q Consensus       544 ~GsL~  548 (570)
                      +.+|.
T Consensus        99 G~~l~  103 (264)
T 1nd4_A           99 GQDLL  103 (264)
T ss_dssp             SEETT
T ss_pred             CcccC
Confidence            98874

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=92.79  E-value=0.28  Score=46.81  Aligned_cols=79  Identities=20%  Similarity=0.236  Sum_probs=56.8

Q ss_pred             CcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCC---CccceeEEEEeCCeeEEEEec
Q 008332          465 RFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV---NLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~---niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .+...+.+|.|..+.||+.++.+|+.+.+|+.+.........|.+|...|..+...   .+.++++.  .  .-++||||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEe
Confidence            45556789999999999999999999999987644433345688999998887422   23344433  2  34789999


Q ss_pred             CCCCCH
Q 008332          542 MPNKSL  547 (570)
Q Consensus       542 ~~~GsL  547 (570)
                      ++.+..
T Consensus        92 l~~~~~   97 (288)
T 3f7w_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             ecccCC
Confidence            987653

>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A

Probab=91.02  E-value=0.25  Score=53.83  Aligned_cols=85  Identities=7%  Similarity=0.058  Sum_probs=54.9

Q ss_pred             HHHHHHHhhCCCceEEEEEcCCCCCC---cccccc-cccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCC--Cccc
Q 008332           78 KFADTVKKKNPSITTILSIGQGKDTN---YSIYSS-MVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTST--DMFN  151 (570)
Q Consensus        78 ~~~~~lk~~~~~~kvllsigg~~~~~---~~~f~~-~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~--~~~~  151 (570)
                      ..+++++++  |++|+=.|--.+...   ...|.. +..+.+....+++.++++++.|||||.=|+-|......  ...+
T Consensus       256 ~winaAHrn--GV~VLGT~i~ew~~~~~~~~~~~~~L~~d~~g~~~~A~KLveiAkyyGFDGWlINiE~~~~~~~~~~~~  333 (937)
T 3gdb_A          256 DVIDAGHRN--GVPVYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYGYDGYFINQETTGDLVKPLGEK  333 (937)
T ss_dssp             HHHHHHHHT--TCCEEEEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHHHHTCCEEEEEEEECSTTTGGGHHH
T ss_pred             hHHHHHHhc--CCeEEEEEecCcccchhhHHHHHHHhccCccchhHHHHHHHHHHHHcCcCceEeccccccccchhhHHH
Confidence            455656655  799986664221111   123333 33466667789999999999999999999999764321  2345


Q ss_pred             hhhhHHHHHHHHh
Q 008332          152 IGLLFDEWRIAAT  164 (570)
Q Consensus       152 ~~~l~~~lr~~l~  164 (570)
                      +..|++.+++...
T Consensus       334 l~~Fl~yl~e~~~  346 (937)
T 3gdb_A          334 MRQFMLYSKEYAA  346 (937)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            6677777665443

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=90.16  E-value=0.32  Score=48.03  Aligned_cols=79  Identities=19%  Similarity=0.362  Sum_probs=55.6

Q ss_pred             ceeeeccCCccEEEEEecCCcEEEEEEec--CCCc-ccHHHHHHHHHHHHccC--CCCccceeEEEEeC---CeeEEEEe
Q 008332          469 RNKLGEGGYGPVYKGVLPCGEVIAVKKLS--KTST-QGFEEFKNEVMLTAKLQ--HVNLIRVLGFCIDS---EERMLIYE  540 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~~~vavK~l~--~~~~-~~~~~f~~e~~~l~~l~--h~niv~l~g~~~~~---~~~~lv~e  540 (570)
                      .+.++.|.++.+|+.... +..+++|+..  .... .....+.+|..++..+.  +..+.++++.+...   +..++|||
T Consensus        43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            467899999999998866 4678888765  2221 22346788999999886  45678888887665   34789999


Q ss_pred             cCCCCCHH
Q 008332          541 YMPNKSLD  548 (570)
Q Consensus       541 ~~~~GsL~  548 (570)
                      |+++..|.
T Consensus       122 ~v~G~~l~  129 (359)
T 3dxp_A          122 FVSGRVLW  129 (359)
T ss_dssp             CCCCBCCC
T ss_pred             ecCCeecC
Confidence            99988773

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=87.72  E-value=1.9  Score=41.50  Aligned_cols=77  Identities=18%  Similarity=0.138  Sum_probs=59.4

Q ss_pred             ccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC---CCCccceeEEEEeCCeeEEEEecCC
Q 008332          467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ---HVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~---h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      ...+.|+.|....+|+.... +..+.+|.....   ....|.+|...|..+.   ...+.++++.+...+..++|||+++
T Consensus        39 ~~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             CEEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            33467899999999998754 677888886432   3456889998888873   3567788888877788999999999


Q ss_pred             CCCH
Q 008332          544 NKSL  547 (570)
Q Consensus       544 ~GsL  547 (570)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=85.75  E-value=3.1  Score=38.74  Aligned_cols=80  Identities=15%  Similarity=0.130  Sum_probs=57.3

Q ss_pred             eeeeccCCc-cEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeEEEEecCCCCC
Q 008332          470 NKLGEGGYG-PVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERMLIYEYMPNKS  546 (570)
Q Consensus       470 ~~lg~G~fg-~V~~~~~~-~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~Gs  546 (570)
                      +.+..|..| .||+-... .+..+.+|+-+..   ....+.+|..+|..+. +-.+.++++.+...+..++|||++++.+
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            345556655 48887643 4567888876432   3456788999988873 4446688888888889999999999988


Q ss_pred             HHHHHh
Q 008332          547 LDCYLF  552 (570)
Q Consensus       547 L~~~L~  552 (570)
                      +.+...
T Consensus       107 ~~~~~~  112 (272)
T 4gkh_A          107 AFQVLE  112 (272)
T ss_dssp             HHHHHH
T ss_pred             cccccc
Confidence            776543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=81.72  E-value=2.1  Score=42.64  Aligned_cols=75  Identities=15%  Similarity=0.187  Sum_probs=48.7

Q ss_pred             ceeeeccCCccEEEEEec-CCcEEEEEEecCCCc-------ccHHHHHHHHHHHHccCC--CCcc-ceeEEEEeCCeeEE
Q 008332          469 RNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST-------QGFEEFKNEVMLTAKLQH--VNLI-RVLGFCIDSEERML  537 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~-~~~~vavK~l~~~~~-------~~~~~f~~e~~~l~~l~h--~niv-~l~g~~~~~~~~~l  537 (570)
                      .+.+|.|..+.||++... .++.+++|...+...       .....+..|..++..+..  +..+ +++..  ..+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            367899999999999743 467899998653211       122456778888887632  3333 44433  4556789


Q ss_pred             EEecCCCC
Q 008332          538 IYEYMPNK  545 (570)
Q Consensus       538 v~e~~~~G  545 (570)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	570
d1goia2	356	c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic	2e-33
d1vf8a1	302	c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin	4e-27
d1vf8a1	302	c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin	2e-04
d1w9pa1	333	c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil	9e-27
d2pi6a1	292	c.1.8.5 (A:1-239,A:308-361) Signal processing prot	2e-26
d2pi6a1	292	c.1.8.5 (A:1-239,A:308-361) Signal processing prot	8e-06
d1ll7a1	330	c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (	5e-26
d1wb0a1	297	c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma	6e-26
d1wb0a1	297	c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma	3e-05
d1edqa2	358	c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt	2e-25
d1jnda1	327	c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f	6e-24
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-24
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-23
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-23
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-22
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-22
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-22
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-21
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-21
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-21
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-20
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-20
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-20
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-19
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-19
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-19
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-19
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-18
d1kfwa1	374	c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina	2e-18
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-18
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-18
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-18
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-18
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-18
d1itxa1	347	c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu	2e-17
d1itxa1	347	c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu	2e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-17
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-17
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-16
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-16
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-15
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-15
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-15
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-14
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-14
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	7e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-14
d1nara_	289	c.1.8.5 (A:) Seed storage protein {Vicia narbonens	8e-14
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-13
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-13
d1edta_	265	c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St	9e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-12
d2ebna_	285	c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl	5e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-12
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-10
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	9e-10
d1vf8a2	70	d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo	2e-08
d2hvma_	273	c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para	1e-06
d1itxa2	72	d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circul	3e-06
d1wb0a2	68	d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo	6e-06
d1edqa3	73	d.26.3.1 (A:444-516) Chitinase A {Serratia marcesc	1e-05
d1eoka_	282	c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl	2e-05
d2pi6a2	68	d.26.3.1 (A:240-307) Signal processing protein (SP	4e-05
d1kfwa2	61	d.26.3.1 (A:328-388) Psychrophilic chitinase B {Ar	4e-05
d1ta3a_	274	c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {	3e-04

>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase B, catalytic domain
species: Serratia marcescens [TaxId: 615]

 Score =  128 bits (323), Expect = 2e-33
 Identities = 63/343 (18%), Positives = 117/343 (34%), Gaps = 55/343 (16%)

Query: 36  EVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFAD---TVKKKNPSITT 92
            VS I+       TH+  S  DINS     +    +++ +     +    +K  NPS+  
Sbjct: 30  PVSNITPAKAKQLTHINFSFLDINSNLE-CAWDPATNDAKARDVVNRLTALKAHNPSLRI 88

Query: 93  ILSIG-----QGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTST 147
           + SIG          +++ Y + V+  + R  F  S +RI + YGF G++  W     + 
Sbjct: 89  MFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWE-YPQAA 147

Query: 148 DMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL--LNSIQRNLNWI 205
           ++        E R    +    +  +     +  A    +   + Y   L  I   L++I
Sbjct: 148 EVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYI 207

Query: 206 HAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGY 265
           + +T     P     T   AAL+G  +G                        +     G+
Sbjct: 208 NLMTYDLAGPWE-KVTNHQAALFGDAAGP------------------TFYNALREANLGW 248

Query: 266 AWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGT 325
           +W  +        +     A           ++ H+   G                +   
Sbjct: 249 SWEELTRAFPSPFSLTVDAA-----------VQQHLMMEGV-------------PSAKIV 284

Query: 326 VWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQA 368
           +   FDD E+ + K  Y K+++L G   W +  D+ +  L  A
Sbjct: 285 MGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNRNGDLLAA 327

>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase-like lectin ym1, saccharide binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  109 bits (272), Expect = 4e-27
 Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 13/233 (5%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
               I+  L THLI + A + +    ++ +   D          +K KN  + T+L+IG 
Sbjct: 21  KPGNIDPCLCTHLIYAFAGMQNNE--ITYTHEQDLRDYEALNG-LKDKNTELKTLLAIGG 77

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP----NTSTDMFNIGL 154
                 + +S+MV    +R+ FI S IR  R Y F GL+  W  P    +   D     +
Sbjct: 78  -WKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSV 136

Query: 155 LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYE 214
           L  E R  A + ++      + LL  T         + Y +  + ++L++I  +T   ++
Sbjct: 137 LVKEMR-KAFEEESVEKDIPRLLLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHD 195

Query: 215 PVSTNFTAPPAALYGS---ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYG 264
           P    +T   + LY S   I      + D ++  W + G +++KL++  P   
Sbjct: 196 P-KDGYTGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPADN 247

>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase-like lectin ym1, saccharide binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.3 bits (96), Expect = 2e-04
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 7/65 (10%)

Query: 304 YGPDVQVMYNSTYEVNYFSTGTV-------WFGFDDVEAVRAKIAYAKEKRLLGYYAWQV 356
           Y        N    ++Y+             F  D+V + + K  + K+  L G   W +
Sbjct: 212 YDIGKSADLNVDSIISYWKDHGAASEKLIVGFPADNVRSFKLKAQWLKDNNLGGAVVWPL 271

Query: 357 SFDDH 361
             DD 
Sbjct: 272 DMDDF 276

>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase 1
species: Aspergillus fumigatus [TaxId: 5085]

 Score =  109 bits (272), Expect = 9e-27
 Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 26/264 (9%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADT---------------- 82
               +  +  TH++ + A++   T ++ ++    + +     D+                
Sbjct: 22  NPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLY 81

Query: 83  -VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT 141
            +KK+N ++  +LSIG    +    ++      + RK+F  +++++ +  GF GLD  W 
Sbjct: 82  LLKKQNRNLKVLLSIGGWTYS--PNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWE 139

Query: 142 APNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
            P       +  LL  E R A     A N+  Q  LL + +            L  + + 
Sbjct: 140 YPENDQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVASPAGPDK-IKVLHLKDMDQQ 198

Query: 202 LNWIHAVTASYYEPVSTNFTAPPAALYGSIS--GRFARSTDQVLKAWIERGLSADKLVMC 259
           L++ + +   Y    S + +   A +Y   S       +T   L  +   G+ A+K+V+ 
Sbjct: 199 LDFWNLMAYDYAGSFS-SLSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKIVLG 257

Query: 260 LPFYGYAWTLVKPE---DNGIGAA 280
           +P        +K       G+G A
Sbjct: 258 MPLDNPQVANLKSGYIKSLGLGGA 281

>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Signal processing protein (SPC-40, MGP-40)
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  106 bits (266), Expect = 2e-26
 Identities = 48/227 (21%), Positives = 90/227 (39%), Gaps = 10/227 (4%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
               I+  L TH+I + A+I++       +   ++  +    +T+K +NP + T+LS+G 
Sbjct: 21  FPDAIDPFLCTHVIYTFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVGG 77

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDE 158
                   +S +   +  R++FI S     R +GF GLD AW  P          L+ + 
Sbjct: 78  WNF-GPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEM 136

Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST 218
                 +  A       S  +   +         Y +  I R+L++I  +T  ++     
Sbjct: 137 KAEFIREAQAGTEQLLLSAAVSAGKIAID---RGYDIAQISRHLDFISLLTYDFHGAWR- 192

Query: 219 NFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKLVMCLPFY 263
                 + L+       +R  + D  +   +  G  A+KLVM +P  
Sbjct: 193 QTVGHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTD 239

>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Signal processing protein (SPC-40, MGP-40)
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 45.6 bits (107), Expect = 8e-06
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 7/58 (12%)

Query: 311 MYNSTYEVNYFSTGTV-------WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDH 361
             N+ Y V+Y                 DD E+V+ K  Y K ++L G   W +  DD 
Sbjct: 212 FSNADYAVSYMLRLGAPANKLVMGIPTDDQESVKNKARYLKNRQLAGAMVWALDLDDF 269

>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase 1
species: Fungus (Coccidioides immitis) [TaxId: 5501]

 Score =  106 bits (266), Expect = 5e-26
 Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 25/263 (9%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFAD----------------T 82
               +  D FTH++ + A+I  +         +D ++                       
Sbjct: 20  NPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYL 79

Query: 83  VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
           +KK N ++ T+LSIG         + +       RK F D+S+++ +  GF G+D  W  
Sbjct: 80  LKKNNRNLKTLLSIGGWTY--SPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQY 137

Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNL 202
           P       +  LL    R A     AK+   ++ LL + +        N   L  + + L
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQN-YNKLKLAEMDKYL 196

Query: 203 NWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKLVMCL 260
           ++ + +   +        +   + ++ S +   +   S+D+ +K +I+ G+ A+K+V+ +
Sbjct: 197 DFWNLMAYDFSGSWD-KVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGM 255

Query: 261 PFYGYAWTLVKPE---DNGIGAA 280
           P         K E    NG+G  
Sbjct: 256 PLDTVKIAGKKAEYITKNGMGGG 278

>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 6e-26
 Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 11/230 (4%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
               ++  L THLI + A + +  +QLS +  +DE    +F   +KK NP + T+L+IG 
Sbjct: 21  LPKDLDPSLCTHLIYAFAGMTN--HQLSTTEWNDETLYQEFNG-LKKMNPKLKTLLAIG- 76

Query: 99  GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGL 154
           G +     ++ MV  +++R++F++S+IR  R Y F GLD  W  P +    + D      
Sbjct: 77  GWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTT 136

Query: 155 LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYE 214
           L  +    A + +A+ S +++ LL        +     Y ++ I +NL++++ +   ++ 
Sbjct: 137 LVQDLA-NAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195

Query: 215 PVS--TNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPF 262
                T   +P            + + D  ++ W+++G  A KL++ +P 
Sbjct: 196 SWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPT 245

>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 3e-05
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 325 TVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
            +    DDVE+ + K++Y K+K L G   W +  DD  
Sbjct: 240 ILGMPTDDVESFKTKVSYLKQKGLGGAMVWALDLDDFA 277

>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase A, catalytic domain
species: Serratia marcescens [TaxId: 615]

 Score =  105 bits (263), Expect = 2e-25
 Identities = 39/248 (15%), Positives = 77/248 (31%), Gaps = 20/248 (8%)

Query: 56  ADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSS 115
           A +      ++      +    +    +K+ +P +  + SIG       S     + +  
Sbjct: 101 AALQKAQKGVTAWDDPYKGNFGQLMA-LKQAHPDLKILPSIGGW---TLSDPFFFMGDKV 156

Query: 116 HRKSFIDSSIRIARLYG-FRGLDFAWTAPNTS---------TDMFNIGLLFDEWRIAATK 165
            R  F+ S     + +  F G+D  W  P             D     LL  E R     
Sbjct: 157 KRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAM--- 213

Query: 166 LDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPA 225
           LD  +    +   + +A        +    N  Q +++ I  ++  +Y            
Sbjct: 214 LDQLSVETGRKYELTSAISAGKDKIDKVAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQT 273

Query: 226 ALYGSISGR-FARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKP--EDNGIGAAAA 282
           AL         A +T   + A + +G+   K+V+       +         D  +G   +
Sbjct: 274 ALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMDARSVQAKGKYVLDKQLGGLFS 333

Query: 283 GPALYDSG 290
                D+G
Sbjct: 334 WEIDADNG 341

>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Imaginal disc growth factor-2
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  100 bits (250), Expect = 6e-24
 Identities = 43/251 (17%), Positives = 96/251 (38%), Gaps = 31/251 (12%)

Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFAD--TVKKKNPSITTILSIGQGK 100
           I     +HL+   A +     Q      + +    +F++  ++K+K P +  +LS+G   
Sbjct: 27  IALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVTSLKRKYPHLKVLLSVGGDH 86

Query: 101 DTNY---SIYSSMVRNSSHRK-SFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGL-- 154
           D +    + Y  ++     R+  FI S+  + + YGF GLD A+  P       +  L  
Sbjct: 87  DIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVHGDLGL 146

Query: 155 ---LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLL---------------- 195
                 +       +D   +  ++    L    + S  A+ +LL                
Sbjct: 147 AWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVNSTWYFDI 206

Query: 196 NSIQRNLNWIHAVTASYY----EPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGL 251
            ++   +++++  T  +      P   +++AP     GS       + D  ++ W+ +G 
Sbjct: 207 PALNGLVDFVNLATFDFLTPARNPEEADYSAPIYHPDGSKDRLAHLNADFQVEYWLSQGF 266

Query: 252 SADKLVMCLPF 262
            ++K+ + +  
Sbjct: 267 PSNKINLGVAT 277

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.6 bits (245), Expect = 9e-24
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
              +   ++G G +G V+ G     + +A+K + +      E+F  E  +  KL H  L+
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCY 550
           ++ G C++     L++E+M +  L  Y
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDY 90

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 3e-23
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 2/95 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           E   +  +LG G +G V+ G       +AVK L + S    + F  E  L  +LQH  L+
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQK 558
           R+       E   +I EYM N SL  +L   S  K
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK 105

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.1 bits (241), Expect = 3e-23
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           +  +   +LG G +G V  G       +A+K + + S    +EF  E  +   L H  L+
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
           ++ G C       +I EYM N  L  YL  + H+
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR 96

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.3 bits (239), Expect = 1e-22
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 2/95 (2%)

Query: 459 IEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGF-EEFKNEVMLTAK 516
           +E   + F   ++LG G  G V+K    P G V+A K +          +   E+ +  +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
                ++   G      E  +  E+M   SLD  L
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL 95

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 95.7 bits (237), Expect = 2e-22
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPC------GEVIAVKKLSKTSTQGFE-EF 507
            L  +E           +GEG +G V++   P         ++AVK L + ++   + +F
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
           + E  L A+  + N++++LG C   +   L++EYM    L+ +L  +S            
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 568 S 568
           S
Sbjct: 124 S 124

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 3e-22
 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
           D E    + ++  ++G G +G VYKG       + +  ++  + Q  + FKNEV +  K 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           +HVN++  +G+   + +  ++ ++    SL  +L 
Sbjct: 62  RHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLH 95

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.6 bits (232), Expect = 7e-22
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
           E      ++++KLG G YG VY+GV       +AVK L + + +  EEF  E  +  +++
Sbjct: 13  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 71

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQK 558
           H NL+++LG C       +I E+M   +L  YL   + Q+
Sbjct: 72  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 111

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 94.3 bits (234), Expect = 7e-22
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG---FEEFKNEVMLTAKLQ 518
            + FS   ++G G +G VY    +   EV+A+KK+S +  Q    +++   EV    KL+
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           H N I+  G  +      L+ EY    + D   
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 106

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 7e-22
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           +   +   +G+G +G V  G    G  +AVK +   +T   + F  E  +  +L+H NL+
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63

Query: 524 RVLGFCIDSEERM-LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           ++LG  ++ +  + ++ EYM   SL  YL   S  ++  G +    +
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKF 108

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 3e-21
 Identities = 18/91 (19%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            ++++   K+G+G  G VY  + +  G+ +A+++++       E   NE+++  + ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           ++  L   +  +E  ++ EY+   SL   + 
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT 109

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.2 bits (228), Expect = 4e-21
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 8/98 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGF-EEFKNEVMLTAK 516
            R S    LG G +G V +              +AVK L  ++     E   +E+ + + 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 517 L-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
           L  H+N++ +LG C      ++I EY     L  +L  
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 120

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.3 bits (226), Expect = 4e-21
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 462 ATERFSIRN-KLGEGGYGPVYKGVLPC---GEVIAVKKLSKTSTQGF-EEFKNEVMLTAK 516
             +   I + +LG G +G V +GV         +A+K L + + +   EE   E  +  +
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
           L +  ++R++G C  +E  ML+ E      L  +L G
Sbjct: 66  LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG 101

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.0 bits (225), Expect = 7e-21
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 14/111 (12%)

Query: 454 YSLADIEAATERFS---------IRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTS 500
           ++  D   A   F+         I   +G G +G V  G L         +A+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 501 T-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
           T +   +F +E  +  +  H N+I + G    S   M+I E+M N SLD +
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 117

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (224), Expect = 1e-20
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGF-E 505
           VY   + E A E+ ++  +LG+G +G VY+GV            +A+K +++ ++     
Sbjct: 9   VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 68

Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           EF NE  +  +    +++R+LG     +  ++I E M    L  YL 
Sbjct: 69  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 115

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.4 bits (224), Expect = 1e-20
 Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 1/91 (1%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
            + + I  +LG+G +G VYK        + A K +   S +  E++  E+ + A   H N
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 70

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           ++++L          ++ E+    ++D  + 
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGGAVDAVML 101

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 90.5 bits (224), Expect = 2e-20
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
           + + I  +LG G +G V++      G   A K +        E  + E+   + L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           + +     D  E ++IYE+M    L   + 
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVA 115

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.9 bits (220), Expect = 4e-20
 Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHV 520
            + +  R+ LG G +  V         +++A+K ++K + +G E   +NE+ +  K++H 
Sbjct: 8   RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67

Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           N++ +           LI + +    L   +
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRI 98

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 5e-20
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 2/98 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           E   +  KLG+G +G V+ G       +A+K L    T   E F  E  +  KL+H  L+
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 75

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYF 561
           ++     + E   ++ EYM   SL  +L G + +    
Sbjct: 76  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRL 112

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 89.7 bits (222), Expect = 5e-20
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
           + + I  +LG G +G V++ V    G V   K ++          KNE+ +  +L H  L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           I +     D  E +LI E++    L   +
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRI 117

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (214), Expect = 2e-19
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
               ++  +G+G +G V++G    GE +AVK  S    + +   + E+  T  L+H N++
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWF-REAEIYQTVMLRHENIL 60

Query: 524 RVLGFCIDSE----ERMLIYEYMPNKSLDCYL 551
             +           +  L+ +Y  + SL  YL
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 92

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 3e-19
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 5/111 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST--QGFEEFKNEVMLTAKLQHV 520
           E + +   +G G YG   K      G+++  K+L   S      +   +EV L  +L+H 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 521 NLIRVLGFCIDSEERM--LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           N++R     ID       ++ EY     L   +   + ++ Y   E     
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 114

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 4e-19
 Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 4/93 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKLQH 519
           E F     LGEG +  V     L      A+K L K              E  + ++L H
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
              +++     D E+      Y  N  L  Y+ 
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 100

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 6e-19
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 8/98 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTSTQGF-EEFKNEVMLTAK 516
           E       LG G +G V                +AVK L + +     E   +E+ +  +
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 517 L-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
           L  H N++ +LG C  S    LI+EY     L  YL  
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 134

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 9e-19
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNK-LGEGGYGPVYKGVLP---CGEVIAVKKLSKTSTQG--FEEFKNEVMLTAKL 517
           +  ++ +K LG G +G V KG        + +AVK L   +      +E   E  +  +L
Sbjct: 6   KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 65

Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
            +  ++R++G C ++E  ML+ E      L+ YL 
Sbjct: 66  DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 99

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 1e-18
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 8/94 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSK---TSTQGFEEFKNEVMLTAK 516
           +   +  KLG+G +G V +G           +AVK L     +  +  ++F  EV     
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
           L H NLIR+ G  +    +M + E  P  SL   
Sbjct: 68  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDR 100

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 2e-18
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 2/98 (2%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGF-EEFKNEVMLTAKLQHV 520
             R++  + +GEG YG V           +A+KK+S    Q + +    E+ +  + +H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQK 558
           N+I +           +   Y+    +   L+ L   +
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ 104

>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Psychrophilic chitinase B
species: Arthrobacter sp., tad20 [TaxId: 1667]

 Score = 84.9 bits (209), Expect = 2e-18
 Identities = 52/309 (16%), Positives = 93/309 (30%), Gaps = 78/309 (25%)

Query: 43  INYDLFTHLICSSADINSTTYQLSLSLPSDENQIA-------KFADT------------- 82
                 TH+  S  +IN+ T    ++  +              +AD              
Sbjct: 34  GTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDGAGDAWADFGMGYAADKSVSGK 93

Query: 83  -----------------VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSI 125
                            +K KNP +  ++S+G    T    +S      + R+  + S I
Sbjct: 94  ADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGW--TWSKNFSKAAATEASRQKLVSSCI 151

Query: 126 RIARLYG----------------FRGLDFAW-----------TAPNTSTDMFNIGLLFDE 158
            +                     F G+D  W              +T  D  N   L  E
Sbjct: 152 DLYIKGNLPNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAE 211

Query: 159 WRIAATKLDAKNSTRQQSLLILTA--RFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPV 216
           +R     LDA  ST  +  ++            A  +   +  ++L++        +   
Sbjct: 212 FRKQ---LDAYGSTNNKKYVLSAFLPANPADIDAGGWDDPANFKSLDFGSIQGYDLHGAW 268

Query: 217 STNFTAPPAALYGSISGRFAR----STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKP 272
           +   T   A LY   +   A     S D+ +K ++  G+   +L + L     A T  K 
Sbjct: 269 NPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLAADNIATTKQKT 328

Query: 273 E---DNGIG 278
           +     G+G
Sbjct: 329 DYIVSKGLG 337

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 3e-18
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVN 521
           E + +   LGEG YG V   V     E +AVK +         E  K E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           +++  G   +   + L  EY     L   + 
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIE 95

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.3 bits (205), Expect = 4e-18
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 455 SLADIEAATERFSIR--NKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTSTQGF-EEF 507
           ++  +        +     +G G +G VY G L          AVK L++ +  G   +F
Sbjct: 16  AVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF 75

Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEER-MLIYEYMPNKSLDCYLFGLSHQKTYF 561
             E ++     H N++ +LG C+ SE   +++  YM +  L  ++   +H  T  
Sbjct: 76  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.9 bits (202), Expect = 4e-18
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQH 519
           E F I   LG+G +G VY         ++A+K L K          + + EV + + L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            N++R+ G+  D+    LI EY P  ++   L
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYREL 97

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 5e-18
 Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 6/92 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTSTQGF-EEFKNEVMLTAKLQ 518
           ER  +   +GEG +G V++G+          +A+K     ++    E+F  E +   +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
           H ++++++G   +     +I E      L  +
Sbjct: 67  HPHIVKLIGVITE-NPVWIIMELCTLGELRSF 97

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 81.7 bits (201), Expect = 6e-18
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 8/97 (8%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG---FEEFKNEVMLTAKLQ 518
           ++R+ +   LG GG   V+    L     +AVK L     +    +  F+ E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 519 HVNLIRVLGFCIDSEER----MLIYEYMPNKSLDCYL 551
           H  ++ V               ++ EY+   +L   +
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 102

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 81.9 bits (201), Expect = 8e-18
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKL--SKTSTQGFEEFKNEVMLTAKLQHVN 521
           E++    K+GEG YG VYK     GE  A+KK+   K           E+ +  +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
           ++++       +  +L++E++          
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV 92

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 9e-18
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP---CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKL-Q 518
                ++ +GEG +G V K  +         A+K++ +  S     +F  E+ +  KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
           H N+I +LG C       L  EY P+ +L  +L  
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 104

>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase A1
species: Bacillus circulans [TaxId: 1397]

 Score = 81.8 bits (201), Expect = 2e-17
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 20/196 (10%)

Query: 82  TVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT 141
            +K+ NP++ TI+S+G    +N   +S +   ++ R+ F +S++   R Y F G+D  W 
Sbjct: 115 KLKQTNPNLKTIISVGGWTWSNR--FSDVAATAATREVFANSAVDFLRKYNFDGVDLDWE 172

Query: 142 A---------PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
                          D  N  LL  + R    KLDA  +   +  L+  A    +  A +
Sbjct: 173 YPVSGGLDGNSKRPEDKQNYTLLLSKIR---EKLDAAGAVDGKKYLLTIASGASATYAAN 229

Query: 193 YLLNSIQRNLNWIHAVTASYYEPVS--TNFTAP----PAALYGSISGRFARSTDQVLKAW 246
             L  I   ++WI+ +T  +       +   AP    PAA    +      +     +  
Sbjct: 230 TELAKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGH 289

Query: 247 IERGLSADKLVMCLPF 262
           ++ G+ A KLV+ +PF
Sbjct: 290 LDAGVPAAKLVLGVPF 305

>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase A1
species: Bacillus circulans [TaxId: 1397]

 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 7/66 (10%)

Query: 312 YNSTYEVNYFSTGTV-------WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
           +N            V          FDD E+V  K AY K K L G   W++S D +  L
Sbjct: 280 FNVAAGAQGHLDAGVPAAKLVLGVPFDDAESVGYKTAYIKSKGLGGAMFWELSGDRNKTL 339

Query: 365 LSQAAA 370
            ++  A
Sbjct: 340 QNKLKA 345

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (199), Expect = 2e-17
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 10/105 (9%)

Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGF------E 505
           V+   +++   + +    +LG G +  V K      G   A K + K  T+        E
Sbjct: 2   VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 58

Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
           + + EV +  ++QH N+I +     +  + +LI E +    L  +
Sbjct: 59  DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF 103

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.7 bits (198), Expect = 2e-17
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGE-----VIAVKKLSKTSTQGF-EEFKNEVML 513
           E      + +  +G G +G VYKG+L          +A+K L    T+    +F  E  +
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62

Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
             +  H N+IR+ G     +  M+I EYM N +LD +
Sbjct: 63  MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKF 99

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 2e-17
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
           E++ I   LG G +G V++ V     +    K +    T      K E+ +    +H N+
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ-VLVKKEISILNIARHRNI 63

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           + +       EE ++I+E++    +   +
Sbjct: 64  LHLHESFESMEELVMIFEFISGLDIFERI 92

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 79.8 bits (196), Expect = 1e-16
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 7/95 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSK---TSTQGFEEFKNEVM---LTAK 516
             FS+   +G GG+G VY       G++ A+K L K      QG     NE +   L + 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
                ++ +       ++   I + M    L  +L
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL 98

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 1e-16
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 466 FSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNL 522
                ++G G +  VYKG+       +A  +L     +    + FK E  +   LQH N+
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 523 IRVLGFCIDSEER----MLIYEYMPNKSLDCYLF 552
           +R       + +     +L+ E M + +L  YL 
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK 104

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 1e-16
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 10/99 (10%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVLP--------CGEVIAVKKLSKTSTQ-GFEEFKNEVMLT 514
           +R  +   LGEG +G V                  +AVK L   +T+    +  +E+ + 
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 515 AKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
             + +H N+I +LG C       +I EY    +L  YL 
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 111

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.7 bits (188), Expect = 6e-16
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 11/101 (10%)

Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK---TSTQGFEEFKN 509
           YSL D       F I   LG G +G V+       G   A+K L K      +  E   +
Sbjct: 1   YSLQD-------FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND 53

Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
           E ++ + + H  +IR+ G   D+++  +I +Y+    L   
Sbjct: 54  ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL 94

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 9e-16
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK---TSTQGFEEFKNEV-MLTAKLQ 518
           E F +   LG+G +G V+        +  A+K L K         E    E  +L+   +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           H  L  +       E    + EY+    L  ++         F L +   Y
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFY 108

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 1e-15
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 11/102 (10%)

Query: 465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
            ++    +G G +G VY+  L   GE++A+KK+ +           E+ +  KL H N++
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76

Query: 524 RVLGFCIDSEERM------LIYEYMPNKSLDCYLFGLSHQKT 559
           R+  F   S E+       L+ +Y+P             ++T
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 118

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 3e-15
 Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 6/109 (5%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHV 520
           E F    K+GEG YG VYK      GEV+A+KK+     +         E+ L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           N++++L       +  L++E++     D   F  +   T   L    SY
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSY 107

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 6e-15
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)

Query: 466 FSIRNKLGEGGYGPVYKGVLP-----CGEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQH 519
           F     LG G +G VYKG+           +A+K+L + TS +  +E  +E  + A + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
            ++ R+LG C+      LI + MP   L  Y
Sbjct: 71  PHVCRLLGICLT-STVQLITQLMPFGCLLDY 100

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 73.2 bits (179), Expect = 6e-15
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 15/117 (12%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGF---------EEFKNEVML 513
           E +  +  LG G    V + +  P  +  AVK +  T    F         E    EV +
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 514 TAKLQ-HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
             K+  H N+I++      +    L+++ M    L  YL     +K     ++T   
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKI 115

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 1e-14
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 470 NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHVNLI 523
           + LGEG +  VYK       +++A+KK+        ++        E+ L  +L H N+I
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCY 550
            +L          L++++M        
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVII 90

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 1e-14
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEE------FKNEVMLTAKL 517
           ++ +   LG GG+G VY G+ +     +A+K + K     + E         EV+L  K+
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 518 Q--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
                 +IR+L +    +  +LI E           
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 100

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 2e-14
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV------LPCGEVIAVKKLSKTSTQG-FEEFKNEV-MLTA 515
           +R  +   LG G +G V +              +AVK L + +T        +E+ +L  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 516 KLQHVNLIRVLGFCIDSEER-MLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
              H+N++ +LG C       M+I E+    +L  YL    ++   + +
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 121

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (172), Expect = 4e-14
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHV 520
           +++    K+GEG YG V+K       E++A+K++               E+ L  +L+H 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCY 550
           N++R+       ++  L++E+        +
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYF 91

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 5e-14
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 3/109 (2%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHV 520
             +     +G G YG V   V    G  +A+KKL +   S    +    E+ L   ++H 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
           N+I +L      E      ++           G   +    G ++    
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 126

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.3 bits (171), Expect = 7e-14
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 3/87 (3%)

Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           R+ +  K+G G +G +Y G  +  GE +A+K     +     +   E  +   +Q    I
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGI 65

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCY 550
             + +C    +  ++   +   SL+  
Sbjct: 66  PTIRWCGAEGDYNVMVMELLGPSLEDL 92

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 70.6 bits (172), Expect = 7e-14
 Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 7/102 (6%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVN 521
           + + +  KLG G Y  V++ + +   E + VK L        ++ K E+ +   L+   N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPN 91

Query: 522 LIRVLGFCIDSEERM--LIYEYMPNKSLDCYLFGLSHQKTYF 561
           +I +     D   R   L++E++ N         L+     F
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF 133

>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Seed storage protein
species: Vicia narbonensis, Narbonin [TaxId: 3912]

 Score = 69.8 bits (170), Expect = 8e-14
 Identities = 31/242 (12%), Positives = 63/242 (26%), Gaps = 27/242 (11%)

Query: 43  INYD-LFTHLICSSA-----DINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSI 96
           IN + L  H I   A     +    T     S   +     K  + +K+++P +  ++SI
Sbjct: 26  INTETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKVKN-LKRRHPEVKVVISI 84

Query: 97  GQGKDTNY---SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIG 153
           G          +  +  V N+      I             G+D  +             
Sbjct: 85  GGRGVNTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHIR---SDEPFA 141

Query: 154 LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYY 213
            L  +     T+L   +      L I       S   +S+         ++I+ V   + 
Sbjct: 142 TLMGQLI---TELKKDD-----DLNINVVSIAPSENNSSHYQKLYNAKKDYINWVDYQFS 193

Query: 214 EPVS--TNFTAPPAALYGSISG----RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAW 267
                 +   A               +                ++ D  +         +
Sbjct: 194 NQQKPVSTDDAFVEIFKSLEKDYHPHKVLPGFSTDPLDTKHNKITRDIFIGGCTRLVQTF 253

Query: 268 TL 269
           +L
Sbjct: 254 SL 255

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 2e-13
 Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG--FEEFKNEVMLTAKLQHV 520
            ++    K+G+G +G V+K      G+ +A+KK+   + +         E+ +   L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 521 NLIRVLGFCIDSEERM--------LIYEYMPNKSLDCYLFGLSH 556
           N++ ++  C               L++++  +         L  
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 113

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 3e-13
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQH 519
            ER+   + +G G YG V        G  +AVKKLS+   S    +    E+ L   ++H
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 520 VNLIRVLGFCIDSEERMLIYEYM 542
            N+I +L     +       +  
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVY 99

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 67.9 bits (165), Expect = 4e-13
 Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
             + +  ++GEG +G +++G  L   + +A+K   + S     + ++E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62

Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
           I  + +        ++   +   SL+  L
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLL 91

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 5e-13
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 9/114 (7%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHV 520
           +R+     +G G  G V           +A+KKLS+   +    +    E++L   + H 
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 521 NLIRVLGFCI------DSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCS 568
           N+I +L          + ++  L+ E M           L H++  + L +   
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 130

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 7e-13
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 462 ATERFSIRNKLGEGGYGPVYKG--VLPCGEVIAVKKLSKTSTQG--FEEFKNEVMLTAKL 517
           A +++    ++GEG YG V+K   +   G  +A+K++   + +         EV +   L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 518 ---QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
              +H N++R+   C  S         +  + +D  L     +    G+
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV 113

>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Endo-beta-N-acetylglucosaminidase
species: Streptomyces plicatus, endoglycosidase H [TaxId: 1922]

 Score = 66.2 bits (161), Expect = 9e-13
 Identities = 40/264 (15%), Positives = 67/264 (25%), Gaps = 34/264 (12%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDEN----QIAKFADTVKKKNPSITTIL 94
           T++    + F   +  +A+IN  T   +  L  +EN               +   I  +L
Sbjct: 24  TLADGGGNAFDVAVIFAANINYDTGTKTAYLHFNENVQRVLDNAVTQIRPLQQQGIKVLL 83

Query: 95  SIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPN------TSTD 148
           S+      +     +   +     +F          YG  G+DF               +
Sbjct: 84  SVLGN---HQGAGFANFPSQQAASAFAKQLSDAVAKYGLDGVDFDDEYAEYGNNGTAQPN 140

Query: 149 MFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAV 208
             +   L    R                 +I         PA S L        +     
Sbjct: 141 DSSFVHLVTALR-----------ANMPDKIISLY---NIGPAASRLSYGGVDVSDKFDYA 186

Query: 209 TASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWT 268
              YY        A P A     +    R++           L+   +      Y   + 
Sbjct: 187 WNPYYGTWQVPGIALPKAQLSPAAVEIGRTSR-----STVADLARRTVDEGYGVYLT-YN 240

Query: 269 LVKPEDNGIGAAAAGPALYDSGLV 292
           L    D     +A    LY S  V
Sbjct: 241 L-DGGDRTADVSAFTRELYGSEAV 263

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 1e-12
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 464 ERFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTS----TQGFEEFKNEVMLTA 515
           E F +   LG G YG V+          G++ A+K L K +     +  E  + E  +  
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 516 KLQHV-NLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
            ++    L+ +        +  LI +Y+    L  +L
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 120

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 2e-12
 Identities = 18/92 (19%), Positives = 28/92 (30%), Gaps = 4/92 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKLQH 519
             F     LG+G +G V        G   A+K L K    +         E  +    +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
             L  +       +    + EY     L  +L
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.0 bits (160), Expect = 2e-12
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 4/93 (4%)

Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKLQH 519
           ++F     LG G +G V        G   A+K L K      +  E   NE  +   +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
             L+++     D+    ++ EY+    +  +L 
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133

>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Endo-beta-N-acetylglucosaminidase
species: Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]

 Score = 64.4 bits (156), Expect = 5e-12
 Identities = 42/295 (14%), Positives = 85/295 (28%), Gaps = 41/295 (13%)

Query: 39  TISGINYDLFTHLICSSADINSTTYQLSLSLPSDEN---QIAKFADTVKK-KNPSITTIL 94
           T+      L   ++  SA+IN       + + ++ N    +   A  +K  ++  I  IL
Sbjct: 26  TLKNSGKPLVDMVVLFSANINYDAANDKVFVSNNPNVQHLLTNRAKYLKPLQDKGIKVIL 85

Query: 95  SIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGL 154
           SI    D   S  +++  +++  K+F         LY   G+ F              G 
Sbjct: 86  SILGNHDR--SGIANL--STARAKAFAQELKNTCDLYNLDGVFFDDEYS-AYQTPPPSGF 140

Query: 155 LFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYY- 213
           +      AA             L+ +    R S    +          +++      Y  
Sbjct: 141 VTPSNNAAARLAYETKQAMPNKLVTVYVYSRTSSFPTAV---DGVNAGSYVDYAIHDYGG 197

Query: 214 -EPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKP 272
              ++TN+     +     S  F +        +       + +       GY       
Sbjct: 198 SYDLATNYPGLAKSGMVMSSQEFNQGR------YATAQALRNIVT-----KGYGG----- 241

Query: 273 EDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVW 327
             + I A     + + SG +   K+           + +Y      +       W
Sbjct: 242 --HMIFAMDPNRSNFTSGQLPALKL---------IAKELYGDELVYSNTPYSKDW 285

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 7e-12
 Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 12/95 (12%)

Query: 464 ERFSIRNK-LGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHV 520
           + + + ++ LG G  G V +       E  A+K L         + + EV L  +  Q  
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCP 65

Query: 521 NLIRVLGFCIDSEER----MLIYEYMPNKSLDCYL 551
           +++R++    +        +++ E +    L   +
Sbjct: 66  HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 100

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.7 bits (143), Expect = 3e-10
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 2/87 (2%)

Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
           R+ +  KLG G +  V+    +     +A+K +        E  ++E+ L  ++   +  
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT-EAAEDEIKLLQRVNDADNT 72

Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCY 550
           +      +   ++L +      +    
Sbjct: 73  KEDSMGANHILKLLDHFNHKGPNGVHV 99

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 56.3 bits (135), Expect = 9e-10
 Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 14/98 (14%)

Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST----------QGFEEFKNEVMLTAK 516
           +I   +GEG    V+           VK      T           G   F    + +A+
Sbjct: 3   AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62

Query: 517 LQHVNLIRVLGFCI----DSEERMLIYEYMPNKSLDCY 550
            +   L ++ G  +      E   ++ E +  K L   
Sbjct: 63  NEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV 100

>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase-like lectin ym1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.1 bits (117), Expect = 2e-08
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 263 YGYAWTLVKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE 317
           YG+ + L  P   GIGA             +SGL+ Y ++   +         ++++  E
Sbjct: 1   YGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNEG---ATEVWDAPQE 57

Query: 318 VNYFSTGTVWFGF 330
           V Y   G  W G+
Sbjct: 58  VPYAYQGNEWVGY 70

>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 273

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Hevamine A (chitinase/lysozyme)
species: Para rubber tree (Hevea brasiliensis) [TaxId: 3981]

 Score = 47.8 bits (113), Expect = 1e-06
 Identities = 34/234 (14%), Positives = 70/234 (29%), Gaps = 39/234 (16%)

Query: 43  INYDLFTHLICSSADI--NSTTYQLSLS---LPSDENQIAKFADTVKKKNPSITTILSIG 97
            +   ++++  +  +   N  T Q++L+    P+              +   I  +LS+G
Sbjct: 20  CSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLG 79

Query: 98  QGKDTNYSIYS-----SMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNI 152
            G   +Y++ S     ++     +      SS R        G+DF     +T       
Sbjct: 80  -GGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGST------- 131

Query: 153 GLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASY 212
                 W   A  L A +   ++  L    +  +        LN+   +  W+       
Sbjct: 132 ----LYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPP 187

Query: 213 YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYA 266
            +  S N      +                        ++A K+ + LP    A
Sbjct: 188 CQYSSGNINNIINSWN-----------------RWTTSINAGKIFLGLPAAPEA 224

>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 72

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase A1
species: Bacillus circulans [TaxId: 1397]

 Score = 43.1 bits (101), Expect = 3e-06
 Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 6/73 (8%)

Query: 263 YGYAWTLVKPEDNGIGAAAAGPA---LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVN 319
           YG  W       NG      G +    +++G   +  ++ +           +N T +V 
Sbjct: 1   YGRGWDGCAQAGNGQYQTCTGGSSVGTWEAGSFDFYDLEANYIN-KNGYTRYWNDTAKVP 59

Query: 320 YFSTGT--VWFGF 330
           Y    +   +  +
Sbjct: 60  YLYNASNKRFISY 72

>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (98), Expect = 6e-06
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 10/73 (13%)

Query: 263 YGYAWTLVKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE 317
           YG ++TL    D  +GA A G         + G++ Y ++ +                 +
Sbjct: 1   YGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKG-----ATKQRIQDQK 55

Query: 318 VNYFSTGTVWFGF 330
           V Y      W GF
Sbjct: 56  VPYIFRDNQWVGF 68

>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Length = 73

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase A
species: Serratia marcescens [TaxId: 615]

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 263 YGYAWTLVKPEDNGIG----AAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEV 318
           YG  WT V    N I     A       +++G+V Y++I         + Q  Y++T E 
Sbjct: 1   YGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIAGQFM--SGEWQYTYDATAEA 58

Query: 319 NYFSTGT--VWFGFD 331
            Y    +      FD
Sbjct: 59  PYVFKPSTGDLITFD 73

>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Length = 282

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Endo-beta-N-acetylglucosaminidase
species: Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]

 Score = 44.5 bits (104), Expect = 2e-05
 Identities = 29/289 (10%), Positives = 66/289 (22%), Gaps = 29/289 (10%)

Query: 26  WIRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLS--LPSDENQIAKFADTV 83
             R     L ++        D+          +  TT     +  + S ++         
Sbjct: 11  DGRNPTFKLKDIP----DKVDMVILFGLKYWSLQDTTKLPGGTGMMGSFKSYKDLDTQIR 66

Query: 84  KKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP 143
             ++  I  + +I        S        +S           +   +   G+       
Sbjct: 67  SLQSRGIKVLQNIDDDVSWQSSKPGG---FASAAAYGDAIKSIVIDKWKLDGISLDIEHS 123

Query: 144 NTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLN 203
               +       +           + +     + L + +         +     +Q    
Sbjct: 124 GAKPNPIPTFPGYAATGYNG--WYSGSMAATPAFLNVISELTKYFGTTAPNNKQLQIASG 181

Query: 204 WIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIE--RGLSADKLVMCLP 261
                     E    NF       YG+       S  Q++  +      + A K+V    
Sbjct: 182 IDVYAWNKIMENFRNNFNYIQLQSYGANV-----SRTQLMMNYATGTNKIPASKMVFGAY 236

Query: 262 FYGYAWTLV-------KPEDNGIGAAAAGPALYDSGLVTY-KKIKNHIK 302
             G              P     G         +   V+Y   +++ +K
Sbjct: 237 AEGGTNQANDVEVAKWTPTQGAKGGMMIYTYNSN---VSYANAVRDAVK 282

>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Signal processing protein (SPC-40, MGP-40)
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 39.8 bits (93), Expect = 4e-05
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 10/73 (13%)

Query: 263 YGYAWTLVKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE 317
           +G ++TL       +GA  +GP +      + G++ Y +I + +               +
Sbjct: 1   FGRSFTLASS-KTDVGAPVSGPGIPGRFTKEKGILAYYEICDFLHGAT----THRFRDQQ 55

Query: 318 VNYFSTGTVWFGF 330
           V Y + G  W  +
Sbjct: 56  VPYATKGNQWVAY 68

>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 61

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Psychrophilic chitinase B
species: Arthrobacter sp., tad20 [TaxId: 1667]

 Score = 39.5 bits (92), Expect = 4e-05
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 7/68 (10%)

Query: 263 YGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFS 322
           YG  WT  K       A    P  Y++    Y K+K     +       Y++     +  
Sbjct: 1   YGRGWTGAKNVSPWGPATDGAPGTYETANEDYDKLKTLGTDH-------YDAATGSAWRY 53

Query: 323 TGTVWFGF 330
            GT W+ +
Sbjct: 54  DGTQWWSY 61

>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Xylanase inhibitor protein I, XIP-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 40.9 bits (95), Expect = 3e-04
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 13/116 (11%)

Query: 43  INYDLFTHLICSSADI--NSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGK 100
            +  ++T +  S  D+   +  Y L LS   D + +   AD    ++  +   LSIG G 
Sbjct: 25  CDSGMYTMVTMSFLDVFGANGKYHLDLS-GHDLSSVG--ADIKHCQSKGVPVSLSIG-GY 80

Query: 101 DTNYSIYSSMVRN-------SSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDM 149
            T YS+ S+           +S+      S  R        G+D        +   
Sbjct: 81  GTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGTPADRY 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	570
d2pi6a1	292	Signal processing protein (SPC-40, MGP-40) {Sheep	100.0
d1itxa1	347	Chitinase A1 {Bacillus circulans [TaxId: 1397]}	100.0
d1kfwa1	374	Psychrophilic chitinase B {Arthrobacter sp., tad20	100.0
d1wb0a1	297	Chitotriosidase {Human (Homo sapiens) [TaxId: 9606	100.0
d1w9pa1	333	Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]}	100.0
d1edqa2	358	Chitinase A, catalytic domain {Serratia marcescens	100.0
d1vf8a1	302	Chitinase-like lectin ym1, saccharide binding doma	100.0
d1ll7a1	330	Chitinase 1 {Fungus (Coccidioides immitis) [TaxId:	100.0
d1jnda1	327	Imaginal disc growth factor-2 {Fruit fly (Drosophi	100.0
d1goia2	356	Chitinase B, catalytic domain {Serratia marcescens	100.0
d1nara_	289	Seed storage protein {Vicia narbonensis, Narbonin	99.97
d1edta_	265	Endo-beta-N-acetylglucosaminidase {Streptomyces pl	99.95
d2hvma_	273	Hevamine A (chitinase/lysozyme) {Para rubber tree	99.95
d2ebna_	285	Endo-beta-N-acetylglucosaminidase {Flavobacterium	99.94
d1ta3a_	274	Xylanase inhibitor protein I, XIP-I {Wheat (Tritic	99.92
d1cnva_	283	Seed storage protein {Jack bean (Canavalia ensifor	99.91
d1eoka_	282	Endo-beta-N-acetylglucosaminidase {Flavobacterium	99.78
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.57
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.56
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.55
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.52
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.52
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.52
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.51
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.5
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.5
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.5
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.5
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.49
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.49
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.47
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.47
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.47
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.46
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.45
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.45
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.44
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.44
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.43
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.43
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.42
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.42
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.42
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.41
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.4
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.4
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.4
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.38
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.37
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.36
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.36
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.35
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.34
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.34
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.3
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.3
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.29
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.26
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.26
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.25
d1vf8a2	70	Chitinase-like lectin ym1 {Mouse (Mus musculus) [T	99.25
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.24
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.24
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.23
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.18
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.17
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.1
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.09
d1wb0a2	68	Chitotriosidase {Human (Homo sapiens) [TaxId: 9606	99.08
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.08
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.07
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.07
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.03
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.02
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.01
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.01
d2pi6a2	68	Signal processing protein (SPC-40, MGP-40) {Sheep	98.99
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.91
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.89
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.81
d1itxa2	72	Chitinase A1 {Bacillus circulans [TaxId: 1397]}	98.7
d1edqa3	73	Chitinase A {Serratia marcescens [TaxId: 615]}	98.68
d1kfwa2	61	Psychrophilic chitinase B {Arthrobacter sp., tad20	98.65
d1jnda2	92	Imaginal disc growth factor-2 {Fruit fly (Drosophi	98.49
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.14
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.09
d1goia3	88	Chitinase B {Serratia marcescens [TaxId: 615]}	97.64
d1w9pa2	62	Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]}	97.37
d1ll7a2	62	Chitinase 1 {Fungus (Coccidioides immitis) [TaxId:	97.34
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	89.44
d2bhua3	420	Glycosyltrehalose trehalohydrolase, central domain	85.26

>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Signal processing protein (SPC-40, MGP-40)
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=2.4e-55  Score=430.61  Aligned_cols=261  Identities=25%  Similarity=0.356  Sum_probs=218.9

Q ss_pred             eEEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcC
Q 008332           26 WIRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ   98 (570)
Q Consensus        26 ~~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg   98 (570)
                      .+|||||++|+       .+.+++||+++||||+|+|+.+++++.  ......+...+.++ ..+|+++|++|+++||||
T Consensus         1 ~kvv~Yy~~w~~~r~~~~~~~~~~i~~~~~THiiyafa~i~~~~~--~~~~~~~~~~~~~~-~~lk~~~~~lKvllSvGG   77 (292)
T d2pi6a1           1 YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANISNNEI--DTWEWNDVTLYDTL-NTLKNRNPKLKTLLSVGG   77 (292)
T ss_dssp             CEEEEEEEGGGGGSSGGGCCCGGGSCTTTCSEEEEEEEEEETTEE--ECCSTTHHHHHHHH-HHHHHHCTTCEEEEEEET
T ss_pred             CeEEEEEccccccCCCCCCCChhHCCcccCCEEEEEEEEecCCCc--eecccccHHHHHHH-HHHHhhCCCceEEEEEec
Confidence            47999999985       357999999999999999999998753  22223344555555 569999999999999999


Q ss_pred             CCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcccccccceE
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLL  178 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~  178 (570)
                      |+. ++..|+.+++++++|++||+++++++++|+|||||||||+|+ ..++.+|+.|++++|.+|.+.....    ...+
T Consensus        78 ~~~-~~~~fs~~~~~~~~r~~fi~si~~~l~~~~fDGiDiDwE~p~-~~~~~~~~~l~~~lr~~l~~~~~~~----~~~~  151 (292)
T d2pi6a1          78 WNF-GPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG-RRDKRHLTTLVKEMKAEFIREAQAG----TEQL  151 (292)
T ss_dssp             TTS-CHHHHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCC-GGGHHHHHHHHHHHHHHHHHHHTTS----SCCC
T ss_pred             ccc-CchHHHHHhccHHHHHHHHHHHHHHHHhcCCCeEEEeccccc-cccccccchhHHHHHHHHHHHHhcc----CCCc
Confidence            865 556799999999999999999999999999999999999994 5788899999999999997543322    2334


Q ss_pred             EEEeecccCCC--CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC--CccCHHHHHHHHHHcCCCCC
Q 008332          179 ILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR--FARSTDQVLKAWIERGLSAD  254 (570)
Q Consensus       179 ~~~~~~~~~~~--~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~--~~~~v~~~v~~~~~~gvp~~  254 (570)
                      .++++++..+.  ...|++.++.+++||||+|+||++++|. ..+|++|||+......  ...+++.+|++|++.|+|++
T Consensus       152 ~~s~~~~~~~~~~~~~~~~~~l~~~vD~invMtYD~~g~~~-~~~g~~apL~~~~~~~~~~~~~v~~~v~~~~~~Gvp~~  230 (292)
T d2pi6a1         152 LLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWR-QTVGHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPAN  230 (292)
T ss_dssp             EEEEEEECCHHHHHHHCCHHHHHHHCSEEEEETTCCSCTTC-CBCCCSSCSSCCSSSCSCTTSSHHHHHHHHHHTTCCGG
T ss_pred             ceecccCchhhHHhccccHHHHHhhCCEEEEecccccCCCC-CccccCCCCCCCCcccCcCCccHHHHHHHHHHCCCCHH
Confidence            45554444332  3578999999999999999999999987 4699999999765432  23589999999999999999


Q ss_pred             ceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHH
Q 008332          255 KLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVE  334 (570)
Q Consensus       255 KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~  334 (570)
                      ||+||||                                                                    |||++
T Consensus       231 KlvlGip--------------------------------------------------------------------ydd~~  242 (292)
T d2pi6a1         231 KLVMGIP--------------------------------------------------------------------TDDQE  242 (292)
T ss_dssp             GEEEEEE--------------------------------------------------------------------SCCHH
T ss_pred             HeEEEec--------------------------------------------------------------------CCCHH
Confidence            9999986                                                                    69999


Q ss_pred             HHHHHHHhhhccCCceEEEEEccccChhhH
Q 008332          335 AVRAKIAYAKEKRLLGYYAWQVSFDDHDWL  364 (570)
Q Consensus       335 Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~  364 (570)
                      |++.|++|++++||||+|+|++++||++.+
T Consensus       243 Si~~K~~~~~~~~lgGv~iW~l~~DD~~G~  272 (292)
T d2pi6a1         243 SVKNKARYLKNRQLAGAMVWALDLDDFRGT  272 (292)
T ss_dssp             HHHHHHHHHHHTTCSEEEEECGGGSCSSSC
T ss_pred             HHHHHHHHHHHCCCceEEEEecccccCCCC
Confidence            999999999999999999999999998753

>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase A1
species: Bacillus circulans [TaxId: 1397]

Probab=100.00  E-value=4e-55  Score=437.68  Aligned_cols=275  Identities=25%  Similarity=0.332  Sum_probs=223.3

Q ss_pred             CCCCCCeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCCceEEeeC---------------------------
Q 008332           20 PAKAKPWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINSTTYQLSLS---------------------------   68 (570)
Q Consensus        20 ~~~~~~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~---------------------------   68 (570)
                      ++++.+.+|||||++|.    .+++++||+++||||+|+|+.++.++......                           
T Consensus         6 ~~a~~~~rvv~Yy~~W~~y~~~~~~~~i~~~~~THi~yaF~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (347)
T d1itxa1           6 AEAADSYKIVGYYPSWAAYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPVTWTCQNEKSQTINVPNGTIV   85 (347)
T ss_dssp             CCGGGGCEEEEEEEGGGGTTTCCCGGGCCGGGCSEEEEEEEEECBTTEEEECCTTSSCCEEEECBCTTSCBCCCCTTCEE
T ss_pred             CCCCCCCEEEEEECcccccCCCCChhHCCHhhCCeEEEeeEeecCCcccccCcccccccccccccccccccccCCCceEE
Confidence            44566789999999994    57899999999999999999998765322211                           


Q ss_pred             --CCc---------------cHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHc
Q 008332           69 --LPS---------------DENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLY  131 (570)
Q Consensus        69 --~~~---------------~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~  131 (570)
                        +++               ....+.++. .||+++|++||++|||||+.  +..|+.+++++++|++||+++++||++|
T Consensus        86 ~~d~~~d~~~~~~~~~~~~~~~g~~~~~~-~lK~~~p~lKvllSiGGw~~--s~~Fs~~~~~~~~R~~Fi~siv~~l~~~  162 (347)
T d1itxa1          86 LGDPWIDTGKTFAGDTWDQPIAGNINQLN-KLKQTNPNLKTIISVGGWTW--SNRFSDVAATAATREVFANSAVDFLRKY  162 (347)
T ss_dssp             ESSHHHHHTSCCTTCCSSSSCCHHHHHHH-HHHHHSTTCEEEEEEECSSS--CTTHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred             ecCchhhhccccccccccccchhHHHHHH-HHHHhCCCCEEEEEEcCCCC--CcchhhhhcCHHHHHHHHHHHHHHHHHh
Confidence              100               012466665 49999999999999999874  5669999999999999999999999999


Q ss_pred             CCCceeeeccCCC---------CCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCC-CCCccChHHHhhh
Q 008332          132 GFRGLDFAWTAPN---------TSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSP-PANSYLLNSIQRN  201 (570)
Q Consensus       132 ~~DGidiDwE~p~---------~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~  201 (570)
                      +|||||||||||+         .++++.+|+.|+++||.+|+.......    ....++++++... ....|++.++.++
T Consensus       163 ~fDGIDiDWE~P~~~g~~~~~~~~~d~~nf~~ll~eLr~~l~~~~~~~~----~~~~ls~a~~~~~~~~~~~d~~~i~~~  238 (347)
T d1itxa1         163 NFDGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDG----KKYLLTIASGASATYAANTELAKIAAI  238 (347)
T ss_dssp             TCSEEEEECSCSSSCSCTTSCCCTTHHHHHHHHHHHHHHHHHHHHHHHT----SCCEEEEEECCSHHHHHTSCHHHHHHH
T ss_pred             CCCcEEEecccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhcC----CccceeecccchhhhhhhccHHHHhhc
Confidence            9999999999984         345778999999999999986544332    2334444443332 2356899999999


Q ss_pred             hceeeeecccCCCCCCCCCCCCCCCCCCCC-------CCCCccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCC
Q 008332          202 LNWIHAVTASYYEPVSTNFTAPPAALYGSI-------SGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPED  274 (570)
Q Consensus       202 vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~-------~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~  274 (570)
                      +||||||+|||+|+|.. .++++|||+..+       ......+++.+|++|+++|+|++||+||||             
T Consensus       239 vD~vnvMtYD~~g~w~~-~~g~~apL~~~~~~~~~~~~~~~~~~v~~~v~~~~~~G~p~~KlvlGip-------------  304 (347)
T d1itxa1         239 VDWINIMTYDFNGAWQK-ISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVP-------------  304 (347)
T ss_dssp             SSEEEECCCCSSCTTSS-BCCCSSCSSCCHHHHHTTCTTTTTCSHHHHHHHHHHHTCCGGGEEEEEE-------------
T ss_pred             cCEEEeeeccccCCCCC-cccccCCCcCCcccccccCCCCCceeHHHHHHHHHHCCCCHHHeEEEec-------------
Confidence            99999999999999864 689999998532       122355899999999999999999999987             


Q ss_pred             CCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHHHHHhhhccCCceEEEE
Q 008332          275 NGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAW  354 (570)
Q Consensus       275 ~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W  354 (570)
                                                                             |||++||+.|++|++++||||+|+|
T Consensus       305 -------------------------------------------------------fd~~~si~~K~~y~k~~~LgGvmiW  329 (347)
T d1itxa1         305 -------------------------------------------------------FDDAESVGYKTAYIKSKGLGGAMFW  329 (347)
T ss_dssp             -------------------------------------------------------SCCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             -------------------------------------------------------cCCHHHHHHHHHHHHhCCCCEEEEE
Confidence                                                                   6999999999999999999999999


Q ss_pred             EccccChhhHHHHhhhc
Q 008332          355 QVSFDDHDWLLSQAAAQ  371 (570)
Q Consensus       355 ~l~~Dd~~~~~~~~~~~  371 (570)
                      ++++||.. +|+++++.
T Consensus       330 ~l~~Dd~~-~L~~a~~~  345 (347)
T d1itxa1         330 ELSGDRNK-TLQNKLKA  345 (347)
T ss_dssp             CGGGCTTC-HHHHHHHH
T ss_pred             EecCCCCc-HHHHHHHh
Confidence            99999875 56666653

>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Psychrophilic chitinase B
species: Arthrobacter sp., tad20 [TaxId: 1667]

Probab=100.00  E-value=2.2e-55  Score=440.16  Aligned_cols=277  Identities=21%  Similarity=0.276  Sum_probs=226.4

Q ss_pred             CCCCCCeEEEEEecCCCCC----c----CCCCCCCCcceEEEEeEEEeCCceEEeeC-----------------------
Q 008332           20 PAKAKPWIRVGYLNLSEVS----T----ISGINYDLFTHLICSSADINSTTYQLSLS-----------------------   68 (570)
Q Consensus        20 ~~~~~~~~vvgY~~~~~~~----~----~~~i~~~~~Thii~~~~~~~~~~~~~~~~-----------------------   68 (570)
                      ++...++++||||++|..+    .    +.++++++||||+|+|+.+++++..+...                       
T Consensus         3 ~~~~~g~rvvgYy~~W~~y~r~~~~~~l~~~i~~~~lTHi~YAFa~i~~~~~~~~~~~~~~~~~~~g~~~~~d~~~d~~~   82 (374)
T d1kfwa1           3 TSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDGAGDAWADFGM   82 (374)
T ss_dssp             BSSBTTBEEEEEEEGGGGSTTCCCHHHHHHTSCGGGCSEEEEEEECBCTTTCSBCCCEECCCSSTTTTTTCEEHHHHHTC
T ss_pred             CCCCCCCEEEEEECcceecCCCCChhhCcCCCChhhCCEEEEeeeeecCCcceeeccccccccCCCCccccCcchhhhcc
Confidence            4567789999999999532    2    46788899999999999999876433211                       


Q ss_pred             ---------------CCccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcC-
Q 008332           69 ---------------LPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG-  132 (570)
Q Consensus        69 ---------------~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~-  132 (570)
                                     +......+.++. .||+++|++||+||||||..  +..|+.+++++++|++||+++++|+++|+ 
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~lK~~~p~lKvllSiGGw~~--s~~F~~~a~~~~~R~~Fi~s~v~~~~~~~l  159 (374)
T d1kfwa1          83 GYAADKSVSGKADTWDQPLAGSFNQLK-QLKAKNPKLKVMISLGGWTW--SKNFSKAAATEASRQKLVSSCIDLYIKGNL  159 (374)
T ss_dssp             CCCTTTSSSSSCCCTTCSCCHHHHHHH-HHHTTCTTCEEEEEEECSSS--CTTHHHHTSSHHHHHHHHHHHHHHHTSCCE
T ss_pred             ccccccccccccccccccchhhHHHHH-HHHhhCCCCeEEEEEeCCCC--CCccchhhcCHHHHHHHHHHHHHHHHHcCC
Confidence                           011224577775 59999999999999999874  55699999999999999999999999999 


Q ss_pred             ---------------CCceeeeccCCCC-----------CCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeeccc
Q 008332          133 ---------------FRGLDFAWTAPNT-----------STDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRY  186 (570)
Q Consensus       133 ---------------~DGidiDwE~p~~-----------~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~  186 (570)
                                     |||||||||||+.           ++|+.+|+.|+++||++|+......+    ..+.++++++.
T Consensus       160 ~~~~~~~~~~~~~~~FDGiDiDWEyP~~~~~~~~~~~~~~~D~~nf~~Ll~eLR~~ld~~~~~~~----k~~~Ls~A~~~  235 (374)
T d1kfwa1         160 PNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNN----KKYVLSAFLPA  235 (374)
T ss_dssp             EEETTEEETTTTTTTCCEEEEECSCTTSSCSSTTCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTT----CCCEEEEEECS
T ss_pred             cccccccccccccccccccceeeeecccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHhcccC----ceEEEEEEecc
Confidence                           8999999999963           45778999999999999986544332    23444444443


Q ss_pred             CCC---CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC----CccCHHHHHHHHHHcCCCCCceeee
Q 008332          187 SPP---ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR----FARSTDQVLKAWIERGLSADKLVMC  259 (570)
Q Consensus       187 ~~~---~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~----~~~~v~~~v~~~~~~gvp~~KlvlG  259 (570)
                      ...   ...|+..++.++|||||||+|||+|+|....++|+||||......    ...+++.+|++|++.|+|++||+||
T Consensus       236 ~~~~~~~~~~d~~~i~~~vD~invMtYD~~G~w~~~~tg~~apLy~~~~~~~~~~~~~svd~aV~~~~~~Gvp~~KlvlG  315 (374)
T d1kfwa1         236 NPADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLG  315 (374)
T ss_dssp             SHHHHHHHTTTCGGGGGTCSEEEECCSCSSCTTSTTBCCCSSCSSCCTTCCSCGGGCCCHHHHHHHHHHTTCCGGGEEEE
T ss_pred             ccccccccCcchhhhhceeEEEEEEecccccCCCCCCCCccCcCCCCCCCCCCCCCCeeHHHHHHHHHHCCCCHHHeEEE
Confidence            322   136888999999999999999999999888899999999765432    2358999999999999999999999


Q ss_pred             ccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHHH
Q 008332          260 LPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAK  339 (570)
Q Consensus       260 ip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~K  339 (570)
                      ||                                                                    ||+++|++.|
T Consensus       316 ip--------------------------------------------------------------------yd~~~si~~K  327 (374)
T d1kfwa1         316 LA--------------------------------------------------------------------ADNIATTKQK  327 (374)
T ss_dssp             EE--------------------------------------------------------------------SCCHHHHHHH
T ss_pred             ec--------------------------------------------------------------------CCCHHHHHHH
Confidence            76                                                                    7899999999


Q ss_pred             HHhhhccCCceEEEEEccccChhhHHHHhhhcc
Q 008332          340 IAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       340 ~~~~~~~gLgGv~~W~l~~Dd~~~~~~~~~~~~  372 (570)
                      ++|++++||||+|+|++++|+. ++|++++...
T Consensus       328 ~~y~~~~glgG~m~W~~~~D~~-g~Ll~a~~~~  359 (374)
T d1kfwa1         328 TDYIVSKGLGGGMWWELSGDRN-GELVGAMSDK  359 (374)
T ss_dssp             HHHHHHTTCCEEEEECGGGCTT-CHHHHHHHHH
T ss_pred             HHHHHhcCCceEEEEEccCCCC-CcHHHHHHHH
Confidence            9999999999999999999985 4677887764

>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-55  Score=429.52  Aligned_cols=262  Identities=26%  Similarity=0.448  Sum_probs=220.4

Q ss_pred             EEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcCC
Q 008332           27 IRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQG   99 (570)
Q Consensus        27 ~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~   99 (570)
                      +|||||++|+       .+.+++||+++||||+|+|+.+++++  .......++..+.++ ..+|+++|++||++|||||
T Consensus         2 kvvcYy~~w~~~~~~~~~~~~~~i~~~~~THi~yaf~~~~~~~--~~~~~~~~~~~~~~~-~~lk~~~p~lKvllSiGG~   78 (297)
T d1wb0a1           2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQ--LSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIGGW   78 (297)
T ss_dssp             EEEEEEETTGGGSCGGGCCCGGGCCTTTCSEEEEEEEEEETTE--EECSSTTHHHHHHHH-HHGGGTCTTCEEEEEEECT
T ss_pred             eEEEEECcCcccCCCCCCCChhHCCcccCCEEEEEEEEccCCc--cccCCcccHHHHHHH-HHHHHhCCCCeEEEEEecc
Confidence            7999999994       46799999999999999999999875  233333344555555 5699999999999999998


Q ss_pred             CCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC----CCCccchhhhHHHHHHHHhhhhhccccccc
Q 008332          100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDEWRIAATKLDAKNSTRQQ  175 (570)
Q Consensus       100 ~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~----~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~  175 (570)
                      +. ++..|+.+++++++|++||+++++||++|||||||||||+|..    +.|+.+|+.|+++||++|+......+   .
T Consensus        79 ~~-~~~~fs~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~d~~n~~~l~~~Lr~~l~~~~~~~~---~  154 (297)
T d1wb0a1          79 NF-GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSG---K  154 (297)
T ss_dssp             TT-CSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHHHHHC---S
T ss_pred             cc-ccchHHHHhhhhHHHHHHHHHHHHHHHHcCCCceeEEEEeccccCCChHHHHHHHHHHHHHHHHHhhhhhhcC---C
Confidence            75 5667999999999999999999999999999999999999954    35788999999999999986544322   2


Q ss_pred             ceEEEEeecccCCC--CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC---CccCHHHHHHHHHHcC
Q 008332          176 SLLILTARFRYSPP--ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR---FARSTDQVLKAWIERG  250 (570)
Q Consensus       176 ~~~~~~~~~~~~~~--~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~---~~~~v~~~v~~~~~~g  250 (570)
                      ..+.++++++....  ...|++.++.+++||||+|+||++|+|. ..+++++||++.....   ...+++.+|++|++.|
T Consensus       155 ~~~~~s~~~~~~~~~~~~~~~~~~i~~~vD~invmtYD~~g~~~-~~tg~~aply~~~~~~~~~~~~~~d~~v~~~~~~G  233 (297)
T d1wb0a1         155 ERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWE-KVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKG  233 (297)
T ss_dssp             CCCEEEEEECCCHHHHHHHCCHHHHHHHCSEEEECCCCSSCTTS-SBCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHTT
T ss_pred             CceeEEEEccCchhHhhhccCHHHHHhhCCEEEEEecccCCCCC-CCCCCCCcCCCCccccCCCCCCCHHHHHHHHHHcC
Confidence            34555555554432  2568999999999999999999999986 4689999999765432   3458999999999999


Q ss_pred             CCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEec
Q 008332          251 LSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF  330 (570)
Q Consensus       251 vp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y  330 (570)
                      +|++||+||||                                                                    |
T Consensus       234 ~p~~KlvlGip--------------------------------------------------------------------y  245 (297)
T d1wb0a1         234 TPASKLILGMP--------------------------------------------------------------------T  245 (297)
T ss_dssp             CCGGGEEEEEE--------------------------------------------------------------------S
T ss_pred             CCHHHeEEEec--------------------------------------------------------------------c
Confidence            99999999987                                                                    6


Q ss_pred             cCHHHHHHHHHhhhccCCceEEEEEccccChhhH
Q 008332          331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL  364 (570)
Q Consensus       331 dd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~  364 (570)
                      ||++|++.|++|++++||||+|+|++++||++..
T Consensus       246 d~~~si~~K~~~~~~~glgGv~~W~l~~DD~~G~  279 (297)
T d1wb0a1         246 DDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGF  279 (297)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEECGGGSCTTCS
T ss_pred             CCHHHHHHHHHHHHhcCCceEEEEeCccccCCCC
Confidence            9999999999999999999999999999998753

>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase 1
species: Aspergillus fumigatus [TaxId: 5085]

Probab=100.00  E-value=7.6e-55  Score=432.72  Aligned_cols=276  Identities=21%  Similarity=0.300  Sum_probs=228.7

Q ss_pred             CCCeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCcc------------------HHHHHHHH
Q 008332           23 AKPWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSD------------------ENQIAKFA   80 (570)
Q Consensus        23 ~~~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~   80 (570)
                      +++++|||||++|+    .+++++||+++||||+|+|+.++++++.+...+++.                  ...+.++.
T Consensus         2 ~~g~kvv~Yy~~W~~y~~~~~~~~i~~~~~THI~yaFa~i~~~~g~~~~~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~   81 (333)
T d1w9pa1           2 SSGYRSVVYFVNWAIYGRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLY   81 (333)
T ss_dssp             BCCBEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEEEECTTTCCEEESCHHHHHTCCCTTCCSSCCSSCCCHHHHHHH
T ss_pred             CCCCEEEEEECcccccCCCCChhHCCcccCCeEEEeeEEecCCCCeEEecChHHhhccccCCccccccccchhhHHHHHH
Confidence            56789999999994    578999999999999999999998877777654321                  13456665


Q ss_pred             HHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHH
Q 008332           81 DTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWR  160 (570)
Q Consensus        81 ~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr  160 (570)
                       .+|+++|++|+++|||||..  +..|+.+++++++|++||+++++||++|+|||||||||+|...++..+++.|+++||
T Consensus        82 -~lk~~~p~lKvllSiGGw~~--s~~f~~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~~~~llkelr  158 (333)
T d1w9pa1          82 -LLKKQNRNLKVLLSIGGWTY--SPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVR  158 (333)
T ss_dssp             -HHHHHCTTCEEEEEEECTTT--GGGHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHH
T ss_pred             -HHHhccCCceEEEEEeCCcC--CCcccccccCHHHHHHHHHHHHHHHHHhcCCceeeeeeecccccccchHHHHHHHHH
Confidence             59999999999999999874  567999999999999999999999999999999999999987778889999999999


Q ss_pred             HHHhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCC--CCcc
Q 008332          161 IAATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISG--RFAR  237 (570)
Q Consensus       161 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~--~~~~  237 (570)
                      ++|+........  ...+.++++++.... ...++++++.++|||||||+|||+++|.. .+++++||+.....  ....
T Consensus       159 ~~L~~~~~~~~~--~~~~~ls~a~~~~~~~~~~~d~~~i~~~vD~invMtYD~~g~~~~-~tg~~aply~~~~~~~~~~~  235 (333)
T d1w9pa1         159 TALDSYSAANAG--GQHFLLTVASPAGPDKIKVLHLKDMDQQLDFWNLMAYDYAGSFSS-LSGHQANVYNDTSNPLSTPF  235 (333)
T ss_dssp             HHHHHHHHHHST--TCCCEEEEEECCSHHHHHHSCHHHHHTTCSEEEECCCCCSSTTSS-SCCCSSCSSCCTTCGGGCSC
T ss_pred             HHHHhhhhhhcc--CCceEEEEEccCChhhhhccchHHHhhcCCeEEEeeeccCCCCCC-CCCCCccccCCCCCCccCCc
Confidence            999865444333  233445555544322 25689999999999999999999999764 68999999976543  2345


Q ss_pred             CHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceE
Q 008332          238 STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYE  317 (570)
Q Consensus       238 ~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~  317 (570)
                      +++.+|++|++.|+|++||||||||||+.|                                                  
T Consensus       236 nv~~av~~~~~~Gvp~~KlvlGiPfyg~~~--------------------------------------------------  265 (333)
T d1w9pa1         236 NTQTALDLYRAGGVPANKIVLGMPLDNPQV--------------------------------------------------  265 (333)
T ss_dssp             CHHHHHHHHHHTTCCGGGEEEEEESCCHHH--------------------------------------------------
T ss_pred             cHHHHHHHHHHCCCCHHHeEEEeCCCchHH--------------------------------------------------
Confidence            899999999999999999999999997644                                                  


Q ss_pred             EEEeecCCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChh-hHHHHhhhcc
Q 008332          318 VNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD-WLLSQAAAQK  372 (570)
Q Consensus       318 ~~y~~~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~-~~~~~~~~~~  372 (570)
                                        ++.|+.|++++||||+|+|++++|... ..|..++...
T Consensus       266 ------------------~~~k~~y~~~~~lgG~m~We~~~D~~~~~sl~~a~~~~  303 (333)
T d1w9pa1         266 ------------------ANLKSGYIKSLGLGGAMWWDSSSDKTGSDSLITTVVNA  303 (333)
T ss_dssp             ------------------HHHHHHHHHHHTCCEEEEECGGGSCCGGGCHHHHHHHH
T ss_pred             ------------------HHHhHHHHHhCCCceEEEEeccCCCCCCchHHHHHHHh
Confidence                              566999999999999999999999754 4566666654

>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase A, catalytic domain
species: Serratia marcescens [TaxId: 615]

Probab=100.00  E-value=3e-54  Score=429.86  Aligned_cols=272  Identities=19%  Similarity=0.277  Sum_probs=218.6

Q ss_pred             CCCCCeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCCceE-------------------------EeeCCC-
Q 008332           21 AKAKPWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINSTTYQ-------------------------LSLSLP-   70 (570)
Q Consensus        21 ~~~~~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~~~~-------------------------~~~~~~-   70 (570)
                      +..++++|+|||++|+    .+.+++||+++||||+|+|+.+++++..                         +...++ 
T Consensus        21 ~~~~~~~v~~Yy~~W~~y~~~~~~~~I~~~~~THi~YAFa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  100 (358)
T d1edqa2          21 KQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPF  100 (358)
T ss_dssp             CCCSSCEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEECBCCCTTTSGGGGGSTTHHHHHHHHTTTCCTTSBCCSCHH
T ss_pred             CCCCCCEEEEEeCcccccCCCCChhhCCHhHCCeEEEeeEEecCCCCcccccccccccccccccccccCCCcceeecCch
Confidence            3455689999999994    6899999999999999999999876421                         111110 


Q ss_pred             ---------------ccHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcC-CC
Q 008332           71 ---------------SDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG-FR  134 (570)
Q Consensus        71 ---------------~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~-~D  134 (570)
                                     .....+.++. .||+++|++|||+|||||+.+  ..|+ +++++++|++||+++++||++|+ ||
T Consensus       101 ~~~~~~~~~~~~~~~~~~g~~~~~~-~LK~~~p~lKvllSiGGw~~s--~~~~-~~a~~~~R~~Fi~svv~~l~~y~~fD  176 (358)
T d1edqa2         101 AALQKAQKGVTAWDDPYKGNFGQLM-ALKQAHPDLKILPSIGGWTLS--DPFF-FMGDKVKRDRFVGSVKEFLQTWKFFD  176 (358)
T ss_dssp             HHHTSCBTTBCSTTCSSCHHHHHHH-HHHHHCTTCEEEEEEECSSSC--GGGG-GTTSHHHHHHHHHHHHHHHHHCTTCC
T ss_pred             hhhhccccCccccccccccHHHHHH-HHHHhCCCCeEEEEEECCCCC--CCcc-cccCHHHHHHHHHHHHHHHHHhccCC
Confidence                           1123577775 499999999999999998753  3354 67899999999999999999999 99


Q ss_pred             ceeeeccCCC---------CCCCccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCC-CCCccChHHHhhhhce
Q 008332          135 GLDFAWTAPN---------TSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSP-PANSYLLNSIQRNLNW  204 (570)
Q Consensus       135 GidiDwE~p~---------~~~~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~vD~  204 (570)
                      |||||||||+         .++|+.||+.|+++||++++......+    ..+.++++++... ....+++..+.+++||
T Consensus       177 GIDIDWEyP~~~g~~~~~~~~~D~~nf~~Ll~eLR~~l~~~~~~~~----~~~~ls~a~~~~~~~~~~~~~~~l~~~vD~  252 (358)
T d1edqa2         177 GVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETG----RKYELTSAISAGKDKIDKVAYNVAQNSMDH  252 (358)
T ss_dssp             EEEEECSCTTSCSSCTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHT----CCCEEEEEEECSHHHHTTSCHHHHGGGCSE
T ss_pred             cccceeeecccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhcC----CccceeeeecCchhhhhhhhHHHHhhcCCE
Confidence            9999999994         357889999999999999987544332    2234444443332 2256899999999999


Q ss_pred             eeeecccCCCCCCCCCCCCCCCCCCCCCC-CCccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCC
Q 008332          205 IHAVTASYYEPVSTNFTAPPAALYGSISG-RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAG  283 (570)
Q Consensus       205 i~vm~yd~~~~~~~~~~~~~a~l~~~~~~-~~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g  283 (570)
                      ||||+|||+|+|....++++++++..... ....+++.+|++|++.|+|++|||||||||||                  
T Consensus       253 inlMtYD~~G~w~~~~~g~~t~l~~~~~~~~~~~~v~~~v~~~~~~Gvp~~KlvlGip~YGR------------------  314 (358)
T d1edqa2         253 IFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMDAR------------------  314 (358)
T ss_dssp             EEEECCCSSCTTCSSSCCCSSCSSCCTTCTTCSCCHHHHHHHHHHHTCCGGGEEEEEESCHH------------------
T ss_pred             EEEeeccccCCCCCCCCCCCCCCCCCccCCCCcccHHHHHHHHHHCCCCHHHeEEEeCccHH------------------
Confidence            99999999999988889999999865432 23458999999999999999999999999996                  


Q ss_pred             CCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhh
Q 008332          284 PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDW  363 (570)
Q Consensus       284 ~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~  363 (570)
                                                                         |++.|.+|++++||||+|+|++++||.+ 
T Consensus       315 ---------------------------------------------------s~~~K~~y~~~~~lgG~~~W~~~~D~g~-  342 (358)
T d1edqa2         315 ---------------------------------------------------SVQAKGKYVLDKQLGGLFSWEIDADNGD-  342 (358)
T ss_dssp             ---------------------------------------------------HHHHHHHHHHHHTCCEEEEECGGGCCSH-
T ss_pred             ---------------------------------------------------HHHHHHHHHhcCCCceEEEEeccCCccH-
Confidence                                                               5578999999999999999999999744 


Q ss_pred             HHHHhhhc
Q 008332          364 LLSQAAAQ  371 (570)
Q Consensus       364 ~~~~~~~~  371 (570)
                       +++++..
T Consensus       343 -ll~a~~~  349 (358)
T d1edqa2         343 -ILNSMNA  349 (358)
T ss_dssp             -HHHHHHH
T ss_pred             -HHHHHHH
Confidence             5566554

>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase-like lectin ym1, saccharide binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.7e-54  Score=424.24  Aligned_cols=271  Identities=24%  Similarity=0.388  Sum_probs=223.0

Q ss_pred             eEEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCccHHHHHHHHHHHHhhCCCceEEEEEcC
Q 008332           26 WIRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ   98 (570)
Q Consensus        26 ~~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg   98 (570)
                      .+|||||++|+       .+++++||+++||||+|+|+.++.++  +.+..+.+...+.++. .+|+++|++|+++||||
T Consensus         1 ~kvvcYy~~w~~~r~~~~~~~~~~i~~~~cTHiiyaf~~i~~~~--~~~~~~~~~~~~~~~~-~lk~~~p~lKvllSiGG   77 (302)
T d1vf8a1           1 YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNE--ITYTHEQDLRDYEALN-GLKDKNTELKTLLAIGG   77 (302)
T ss_dssp             CEEEEEEEGGGGGSCGGGCCCGGGSCTTTCSEEEEEEEEEETTE--EECSSTTHHHHHHHHH-HGGGTCTTCEEEEEEEC
T ss_pred             CeEEEEECcccccCCCCCCCChhHCCcccCcEEEEEEEEecCCc--eEEcCcccHHHHHHHH-HHHHhCCCcEEEEEEec
Confidence            47999999995       57899999999999999999999875  4444445556666664 59999999999999999


Q ss_pred             CCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC----CCCccchhhhHHHHHHHHhhhhhcccccc
Q 008332           99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDEWRIAATKLDAKNSTRQ  174 (570)
Q Consensus        99 ~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~----~~~~~~~~~l~~~lr~~l~~~~~~~~~~~  174 (570)
                      |.. ++..|+.+++++++|++||++++++|++|+|||||||||+|+.    ++|+.+|+.|+++||++|+........  
T Consensus        78 ~~~-~~~~fs~~~~~~~~R~~fi~si~~~l~~~~fDGIDIDWE~p~~~~~~~~d~~n~~~ll~elr~~l~~~~~~~~~--  154 (302)
T d1vf8a1          78 WKF-GPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMRKAFEEESVEKDI--  154 (302)
T ss_dssp             TTT-CSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTHHHHHHHHHHHHHHHHHHHHHHHHTS--
T ss_pred             CCC-CCcchHHHhcchHHHHHHHHHHHHHHHHhCCCeeeeeeeecccccccchhHhHHHHHHHHHHHHHHHhhhhcCC--
Confidence            875 5567999999999999999999999999999999999999963    467788999999999999865433322  


Q ss_pred             cceEEEEeecccC-CCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC---CccCHHHHHHHHHHcC
Q 008332          175 QSLLILTARFRYS-PPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR---FARSTDQVLKAWIERG  250 (570)
Q Consensus       175 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~---~~~~v~~~v~~~~~~g  250 (570)
                      +..+.+++..+.. .....||+.++.+++|+||+|+||++++|. +.++++|||+..+...   ...+++.+|++|++.|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~yd~~~~~~~vD~inlmtYD~~g~~~-~~tg~~apl~~~~~~~~~~~~~~v~~~v~~~~~~G  233 (302)
T d1vf8a1         155 PRLLLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDPKD-GYTGENSPLYKSPYDIGKSADLNVDSIISYWKDHG  233 (302)
T ss_dssp             CCCEEEEEECSSHHHHHHHCCHHHHHHHCSEEEECCCCCSCGGG-SBCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHTT
T ss_pred             CceeeeecccchhhhhhhcCcchhhccccCeeeeeccccCCCCC-CCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHcC
Confidence            2223333322211 123568999999999999999999999876 4699999999765432   3458999999999999


Q ss_pred             CCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEec
Q 008332          251 LSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF  330 (570)
Q Consensus       251 vp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y  330 (570)
                      +|++||+||||+|                                                                   
T Consensus       234 vp~~KlvlGip~~-------------------------------------------------------------------  246 (302)
T d1vf8a1         234 AASEKLIVGFPAD-------------------------------------------------------------------  246 (302)
T ss_dssp             CCGGGEEEEEESC-------------------------------------------------------------------
T ss_pred             CCHHHeEEEEecC-------------------------------------------------------------------
Confidence            9999999999965                                                                   


Q ss_pred             cCHHHHHHHHHhhhccCCceEEEEEccccChhhH--------HHHhhhc
Q 008332          331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL--------LSQAAAQ  371 (570)
Q Consensus       331 dd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~--------~~~~~~~  371 (570)
                       +++|++.|++|++++||||+|+|++++||++..        |++++.+
T Consensus       247 -g~rs~~~K~~~~~~~~lgGv~~W~~d~DDf~G~~c~~~~~pLl~~i~~  294 (302)
T d1vf8a1         247 -NVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTSTLKG  294 (302)
T ss_dssp             -CHHHHHHHHHHHHHTTCCEEEEETGGGSCTTSTTTSSCSSHHHHHHHH
T ss_pred             -ChHHHHHHHHHHHhCCCeeEEEeccccCCCCCCcCCCCCChHHHHHHH
Confidence             368999999999999999999999999998864        6666554

>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase 1
species: Fungus (Coccidioides immitis) [TaxId: 5501]

Probab=100.00  E-value=3.2e-53  Score=421.23  Aligned_cols=273  Identities=22%  Similarity=0.311  Sum_probs=224.9

Q ss_pred             CeEEEEEecCCC----CCcCCCCCCCCcceEEEEeEEEeCCceEEeeCCCc------------------cHHHHHHHHHH
Q 008332           25 PWIRVGYLNLSE----VSTISGINYDLFTHLICSSADINSTTYQLSLSLPS------------------DENQIAKFADT   82 (570)
Q Consensus        25 ~~~vvgY~~~~~----~~~~~~i~~~~~Thii~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~   82 (570)
                      +++|||||++|.    .+++++||+++||||+|+|+.+++++ .+...+.+                  ....+.++. .
T Consensus         2 g~kvv~Yy~~W~~y~~~~~~~~i~~~~~THi~yaFa~i~~~g-~~~~~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~   79 (330)
T d1ll7a1           2 GFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSG-EVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMY-L   79 (330)
T ss_dssp             CBEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEEEECTTS-CEEESCHHHHTTCCCTTCCSSCSSCCCCHHHHHHH-H
T ss_pred             CcEEEEEECcccccCCCCChhHCCcccCceeEEeeEEECCCC-CEEecChhHhhcccCCccccccccchhhHHHHHHH-H
Confidence            579999999984    57899999999999999999999986 55443321                  123566665 5


Q ss_pred             HHhhCCCceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHH
Q 008332           83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA  162 (570)
Q Consensus        83 lk~~~~~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~  162 (570)
                      +|+++|++|||+|||||+  .+..|+.+++++++|++||++++++|++|+|||||||||+|...++..++..|+++||++
T Consensus        80 lk~~~p~lKvllSvGGw~--~s~~f~~~~~~~~~R~~Fi~siv~~l~~y~fDGIDiDWE~p~~~~~~~~~~~~l~~lr~~  157 (330)
T d1ll7a1          80 LKKNNRNLKTLLSIGGWT--YSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQYPEDEKQANDFVLLLKACREA  157 (330)
T ss_dssp             HHHHCTTCEEEEEEEHHH--HGGGSHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCeEEEEEeCCC--CCCCchhhhcCHHHHHHHHHHHHHHHHHhcccccceEEEeeccccccccHHHHHHHHHHH
Confidence            999999999999999986  356799999999999999999999999999999999999998778888999999999999


Q ss_pred             HhhhhhcccccccceEEEEeecccCCC-CCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCC--CccCH
Q 008332          163 ATKLDAKNSTRQQSLLILTARFRYSPP-ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGR--FARST  239 (570)
Q Consensus       163 l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~--~~~~v  239 (570)
                      |+.........  ..+.++++++.... ...|++.++.+++||||||+||++|.|. ..++|++||+......  ...++
T Consensus       158 l~~~~~~~~~g--~~~~lt~a~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~w~-~~tg~~s~l~~~~~~~~~~~~sv  234 (330)
T d1ll7a1         158 LDAYSAKHPNG--KKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWD-KVSGHMSNVFPSTTKPESTPFSS  234 (330)
T ss_dssp             HHHHHHTSTTS--CCCEEEEEEECSHHHHTTSCHHHHHTTCSEEEEECCCSSSTTS-SBCCCSSCSSCCSSCGGGCSCCH
T ss_pred             HHHHHHHhhcC--CceeEEEeccCChHhhccccHHHHhhcCCEEEEEEeeccCCCC-CCCCcCcccCCCcCCCCCCCccH
Confidence            98665443332  33444444443322 2579999999999999999999999976 4699999999765432  24589


Q ss_pred             HHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEE
Q 008332          240 DQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVN  319 (570)
Q Consensus       240 ~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~  319 (570)
                      +.+|++|+++|+|++||+||||||||.|.                                                   
T Consensus       235 ~~av~~~~~~Gvp~~KlvlGiP~ygr~~~---------------------------------------------------  263 (330)
T d1ll7a1         235 DKAVKDYIKAGVPANKIVLGMPLDTVKIA---------------------------------------------------  263 (330)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEEESCCHHHH---------------------------------------------------
T ss_pred             HHHHHHHHHCCCCHHHeEEEecCCCchhh---------------------------------------------------
Confidence            99999999999999999999999999872                                                   


Q ss_pred             EeecCCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChh-hHHHHhhhcc
Q 008332          320 YFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD-WLLSQAAAQK  372 (570)
Q Consensus       320 y~~~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~-~~~~~~~~~~  372 (570)
                                       +.|++|++++||||+|+|++++|... ..+..+....
T Consensus       264 -----------------~~k~~~~~~~g~gG~m~We~~~D~~g~~sl~~a~~~~  300 (330)
T d1ll7a1         264 -----------------GKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNG  300 (330)
T ss_dssp             -----------------HHHHHHHHHTTCCEEEEECTTSCCCGGGCHHHHHHHH
T ss_pred             -----------------hhhhHhHhhcCCCceEEEeeccCCCCCcccccccccC
Confidence                             24999999999999999999999854 4465666554

>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Imaginal disc growth factor-2
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=6.4e-53  Score=419.54  Aligned_cols=259  Identities=19%  Similarity=0.312  Sum_probs=212.2

Q ss_pred             EEEEEecCCC-------CCcCCCC--CCCCcceEEEEeEEEeCCceEEeeCCCc---cHHHHHHHHHHHHhhCCCceEEE
Q 008332           27 IRVGYLNLSE-------VSTISGI--NYDLFTHLICSSADINSTTYQLSLSLPS---DENQIAKFADTVKKKNPSITTIL   94 (570)
Q Consensus        27 ~vvgY~~~~~-------~~~~~~i--~~~~~Thii~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~lk~~~~~~kvll   94 (570)
                      .|||||++|+       .+.+.+|  ++++||||+|+|+.+++++..+...+.+   ....+.++. .+|++||++|+++
T Consensus         2 ~ivcYy~~ws~~r~g~~~~~~~~id~~~~~cTHiiyafa~i~~~~~~~~~~d~~~d~~~~~~~~~~-~lk~~~p~lKvll   80 (327)
T d1jnda1           2 NLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVT-SLKRKYPHLKVLL   80 (327)
T ss_dssp             EEEEEEEGGGGGCSSTTCCCHHHHHHHGGGCSEEEEEEEEECTTTCCEEETTHHHHTTTCHHHHHH-GGGGTSTTCEEEE
T ss_pred             eEEEEECCCcccCCCCCCcCHhhcCCCcccCCeEEEEEEEecCCCCEEEecCchhhhhHHHHHHHH-HHHHhCCCCeEEE
Confidence            6899999995       3455555  6778999999999999887666655433   233567775 5999999999999


Q ss_pred             EEcCCCCCC----cccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCC-----------------------
Q 008332           95 SIGQGKDTN----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTST-----------------------  147 (570)
Q Consensus        95 sigg~~~~~----~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~-----------------------  147 (570)
                      |||||+.+.    +..|+.+++++++|++||+++++||++|+|||||||||||+...                       
T Consensus        81 SiGGw~~~~~~~~~~~~~~~~~~~~rr~~Fi~svv~~l~~~~fDGIDiDWEyP~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (327)
T d1jnda1          81 SVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFI  160 (327)
T ss_dssp             EEETTCCCCTTSTTHHHHHHTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCCCCCCCC-------------------C
T ss_pred             EEECCCCCCCCcccchhHHHhCCHHHHHHHHHHHHHHHHHCCCCceEEEeeccCCCCcccccccchhhhhhhhccccccc
Confidence            999986432    33467788888888999999999999999999999999996421                       


Q ss_pred             -------CccchhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCC-CccChHHHhhhhceeeeecccCCCCCC-C
Q 008332          148 -------DMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-NSYLLNSIQRNLNWIHAVTASYYEPVS-T  218 (570)
Q Consensus       148 -------~~~~~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~vD~i~vm~yd~~~~~~-~  218 (570)
                             ++++|+.|++++|.++.          ...+.+++++++.... ..|++.++.+++||||+|+||++++|. .
T Consensus       161 ~~~~~~~d~~~~~~l~~elr~~l~----------~~~~~ls~a~~~~~~~~~~~d~~~l~~~vD~vnlmtYD~~g~~~~~  230 (327)
T d1jnda1         161 VDPHAALHKEQFTALVRDVKDSLR----------ADGFLLSLTVLPNVNSTWYFDIPALNGLVDFVNLATFDFLTPARNP  230 (327)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHH----------TTTCEEEEEECTTCCHHHHCCHHHHHTTCSEEEECCCCSSCTTTCT
T ss_pred             cccccHHHHHHHHHHHHHHHHhhc----------cCCceEEEEecCChHHhhcccHHHHhhhhhhHhhhhhhhcCccccC
Confidence                   35689999999999997          3334455555544332 578999999999999999999999875 3


Q ss_pred             CCCCCCCCCCCCCCCC---CccCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHH
Q 008332          219 NFTAPPAALYGSISGR---FARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYK  295 (570)
Q Consensus       219 ~~~~~~a~l~~~~~~~---~~~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~  295 (570)
                      ..++++|||++.....   ...+++.+|++|++.|+|++||++|||                                  
T Consensus       231 ~~~g~~apL~~~~~~~~~~~~~~~d~~v~~~~~~G~p~~Kl~lGi~----------------------------------  276 (327)
T d1jnda1         231 EEADYSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVA----------------------------------  276 (327)
T ss_dssp             TCBCCSSCSSCCTTSTTCCTTCSHHHHHHHHHHTTCCGGGEEEEEE----------------------------------
T ss_pred             CcccccCCCCCCCCCCCcccCccHHHHHHHHHHcCCCHHHeEEEEc----------------------------------
Confidence            5789999999765432   345899999999999999999999875                                  


Q ss_pred             HHHHHHhhCCCCeEEeecCceEEEEeecCCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhhH
Q 008332          296 KIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL  364 (570)
Q Consensus       296 ~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~  364 (570)
                                                        |||++|++.|++|++++||||+|+|++++||++..
T Consensus       277 ----------------------------------ydd~~Si~~K~~~~~~~~lgGv~~W~l~~DDf~G~  311 (327)
T d1jnda1         277 ----------------------------------TDDPDSASNKAAYARVKNLGGVALFDLSYDDFRGQ  311 (327)
T ss_dssp             ----------------------------------SCCHHHHHHHHHHHHHTTCSEEEEECGGGSCTTCT
T ss_pred             ----------------------------------CCCHHHHHHHHHHHHhcCCCEEEEEeccCCCCCCc
Confidence                                              79999999999999999999999999999998754

>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase B, catalytic domain
species: Serratia marcescens [TaxId: 615]

Probab=100.00  E-value=3.6e-51  Score=412.10  Aligned_cols=302  Identities=21%  Similarity=0.250  Sum_probs=224.6

Q ss_pred             CeEEEEEec-------CCC-------CCcCCCCCC---CCcceEEEEeEEEeCCceEEeeCCCccHH----HHHHHHHHH
Q 008332           25 PWIRVGYLN-------LSE-------VSTISGINY---DLFTHLICSSADINSTTYQLSLSLPSDEN----QIAKFADTV   83 (570)
Q Consensus        25 ~~~vvgY~~-------~~~-------~~~~~~i~~---~~~Thii~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l   83 (570)
                      .++|||||.       +|.       .+++++|+.   ++||||+|+|+.+++++ .+.+....++.    .+.++ ..|
T Consensus         2 ~~~~~~yy~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~lTHi~yaFa~i~~~g-~~~~~~~~~~~~~~~~~~~~-~~l   79 (356)
T d1goia2           2 RKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNL-ECAWDPATNDAKARDVVNRL-TAL   79 (356)
T ss_dssp             CCEEEEEEECCHHHHHTCCSSCTTTCSSCGGGSCHHHHHHCSEEEEEEEEECTTS-SEECCTTCCHHHHHHHHHHH-HHG
T ss_pred             CcEEEEEEeCCccCcCcccccCCccCCcChhcCCcchHhhCCeEEEEEEEECCCc-cEEecCCccchHHHHHHHHH-HHH
Confidence            578999994       332       455666654   67899999999999987 44544433332    34444 459


Q ss_pred             HhhCCCceEEEEEcCCCCC-----CcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHH
Q 008332           84 KKKNPSITTILSIGQGKDT-----NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDE  158 (570)
Q Consensus        84 k~~~~~~kvllsigg~~~~-----~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~  158 (570)
                      |+++|++||++|||||..+     ....|+.+++++++|++||+++++||++|||||||||||||. .+++.+|+.|+++
T Consensus        80 K~~~p~lKvllSiGGW~~s~~~~~~~~~fs~~~~~~~~R~~Fi~siv~~l~~ygfDGIDIDWE~P~-~~~~~~~~~l~~e  158 (356)
T d1goia2          80 KAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQ-AAEVDGFIAALQE  158 (356)
T ss_dssp             GGGCTTCEEEEEEECHHHHSTTSTTHHHHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCC-HHHHHHHHHHHHH
T ss_pred             HHHCCCCeEEEEEcCCcCCCCCcccccchHHHhCCHHHHHHHHHHHHHHHHHhCCCceeeeecccc-ccccccchhHHHH
Confidence            9999999999999998532     345799999999999999999999999999999999999994 5778899999999


Q ss_pred             HHHHHhhhhhccccc-ccceEEEEeecccCC-CCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCc
Q 008332          159 WRIAATKLDAKNSTR-QQSLLILTARFRYSP-PANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFA  236 (570)
Q Consensus       159 lr~~l~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~  236 (570)
                      +|..+.......... ....++++++..... ....++++++.+++||||||+||+|++|+ +.++++|||++.      
T Consensus       159 l~~~~~~~~~~~~~~~~~~~ls~a~~~~~~~~~~~~~d~~~l~~~vD~invMtYD~~g~w~-~~tg~~spLy~~------  231 (356)
T d1goia2         159 IRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWE-KVTNHQAALFGD------  231 (356)
T ss_dssp             HHHHHHHHHHHTTCTTSCCEEEEEEESSHHHHTTTGGGHHHHHTTCSEEEEECCCSSCTTS-SSCCCTTCSSBC------
T ss_pred             HHHHHHHHHHHhccccccceeEEeccCCHHHHhhhhhHHHHhhcccCeeEEEeecccCCCC-CCCCCCCcccCC------
Confidence            999887654333221 122344444332211 22456899999999999999999999986 469999999853      


Q ss_pred             cCHHHHHHHHHHcCCCCCceeeeccccccceeccCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCce
Q 008332          237 RSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTY  316 (570)
Q Consensus       237 ~~v~~~v~~~~~~gvp~~KlvlGip~yG~~~~~~~~~~~~~g~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~  316 (570)
                                  .+.|..+.+++.++||+.|........+.            +..++..........           .
T Consensus       232 ------------~~~p~~~~~~~~~~~G~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-----------~  276 (356)
T d1goia2         232 ------------AAGPTFYNALREANLGWSWEELTRAFPSP------------FSLTVDAAVQQHLMM-----------E  276 (356)
T ss_dssp             ------------TTSCCBCCGGGGSSCCCCHHHHHHHCCSS------------BCCCHHHHHHHHHTS-----------T
T ss_pred             ------------CCCChhhccccccccccChhhcccccCCC------------cceeccHHHHHHHHh-----------c
Confidence                        34688999999999999996543221111            123333332221111           1


Q ss_pred             EEEEeecCCEEEeccCHHHHHHHHHhhhccCCceEEEEEccccChhhHHHHhhhcc
Q 008332          317 EVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQK  372 (570)
Q Consensus       317 ~~~y~~~~~~~i~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd~~~~~~~~~~~~  372 (570)
                      ..|+ .+..+||+|||++||++|++||+++||||+|+|+|++||++++|++|+...
T Consensus       277 ~~p~-~~~~~~vsydd~~Si~~K~~y~~~~~LgGv~iW~l~~Dd~~gsLl~ai~~~  331 (356)
T d1goia2         277 GVPS-AKIVMGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNRNGDLLAALDRY  331 (356)
T ss_dssp             TCCG-GGEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECGGGSCTTCHHHHHHHHH
T ss_pred             CCCc-cceeEEeccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCcHHHHHHHHh
Confidence            1121 234579999999999999999999999999999999999999999998753

>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Seed storage protein
species: Vicia narbonensis, Narbonin [TaxId: 3912]

Probab=99.97  E-value=2.9e-32  Score=263.50  Aligned_cols=216  Identities=13%  Similarity=0.070  Sum_probs=151.8

Q ss_pred             eEEEEEecCC-CCCcCCCCCCCCc------ceEEEEeEEEeCC---ceEEeeCCCccHH-HHHHHHHHHHhhCCCceEEE
Q 008332           26 WIRVGYLNLS-EVSTISGINYDLF------THLICSSADINST---TYQLSLSLPSDEN-QIAKFADTVKKKNPSITTIL   94 (570)
Q Consensus        26 ~~vvgY~~~~-~~~~~~~i~~~~~------Thii~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~lk~~~~~~kvll   94 (570)
                      ++.-.|+-.. ...+++++|.+.+      +|+|++|+.....   .....+...++.. ...+.++.+|+++|++||||
T Consensus         3 ~~~r~Y~g~~~~~~~~~d~p~~~~~~~~~~~h~i~aFa~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~lK~~~~~~Kvll   82 (289)
T d1nara_           3 PIFREYIGVKPNSTTLHDFPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKVKNLKRRHPEVKVVI   82 (289)
T ss_dssp             CEEEEEESCCTTCCSCSSCCSTTCCCSSSEEEEEEEEEEEEECTTSCEEEEEEECSCHHHHSHHHHHHHHHHCTTCEEEE
T ss_pred             cchhhhcCCCCCCCccccCChhhcCCCceEEEEEEecccccCCCCCCCCCeeccccccccccHHHHHHHHHHCCCCeEEE
Confidence            3444566432 2456666666544      5999999854421   1122333333332 23455677999999999999


Q ss_pred             EEcCCCCCCc---ccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhccc
Q 008332           95 SIGQGKDTNY---SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNS  171 (570)
Q Consensus        95 sigg~~~~~~---~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~  171 (570)
                      |||||+.+..   ..++.++++...|.+|+.++++++++|+|||||||||+|.   +..+|..|+++||.+|++-     
T Consensus        83 SiGG~~~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~DGiDiDwE~p~---~~~~~~~ll~~Lr~~l~~~-----  154 (289)
T d1nara_          83 SIGGRGVNTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHIR---SDEPFATLMGQLITELKKD-----  154 (289)
T ss_dssp             EEEESSTTSCBCBSCHHHHHHHHHHHHHHHHHHSEETTEECCCEEEEEESCBC---SSTTHHHHHHHHHHHHHHC-----
T ss_pred             EecCCCCCCccChhhhHHHHhCHHHHHHHHHHHHHHHHhcCCCceeeeeeecC---CHHHHHHHHHHHHHHHhhC-----
Confidence            9999876432   3456778899999999999999999999999999999984   4578999999999999741     


Q ss_pred             ccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCC
Q 008332          172 TRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGL  251 (570)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gv  251 (570)
                        ....+.++++.+ ......++++.+.+++|+|++|+||++|.|.. .+++++++.             ..+.| ..|+
T Consensus       155 --~~~~~~~~~~ap-~~~~~~~~~~~~~~~~D~in~m~ydfyg~w~~-~~g~~~~~~-------------~~~~~-~~~~  216 (289)
T d1nara_         155 --DDLNINVVSIAP-SENNSSHYQKLYNAKKDYINWVDYQFSNQQKP-VSTDDAFVE-------------IFKSL-EKDY  216 (289)
T ss_dssp             --TTSCCCEEEECC-CTTTHHHHHHHHHHHTTTCCEEEEEGGGCSSC-CCSHHHHHH-------------HHHHH-HHHS
T ss_pred             --CCcEEEEEEecC-cCccccchHHHHHhhCCEEEEEEEeccCCCCC-CCChhHHHH-------------HHHHh-hcCC
Confidence              122333433333 23335566788899999999999999998764 455544432             22223 4469


Q ss_pred             CCCceeeeccccccce
Q 008332          252 SADKLVMCLPFYGYAW  267 (570)
Q Consensus       252 p~~KlvlGip~yG~~~  267 (570)
                      |++||+||+|.++..+
T Consensus       217 p~~Kv~lG~pa~~~~~  232 (289)
T d1nara_         217 HPHKVLPGFSTDPLDT  232 (289)
T ss_dssp             CTTCEEEEEECCHHHH
T ss_pred             ChhheEEeeecchhhh
Confidence            9999999999887766

>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Endo-beta-N-acetylglucosaminidase
species: Streptomyces plicatus, endoglycosidase H [TaxId: 1922]

Probab=99.95  E-value=4e-28  Score=230.31  Aligned_cols=176  Identities=14%  Similarity=0.138  Sum_probs=128.6

Q ss_pred             CCeEEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCc--eEEeeCCCcc-HH---HHHHHHHHHHhhCCCc
Q 008332           24 KPWIRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTT--YQLSLSLPSD-EN---QIAKFADTVKKKNPSI   90 (570)
Q Consensus        24 ~~~~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~--~~~~~~~~~~-~~---~~~~~~~~lk~~~~~~   90 (570)
                      .++++|||++.|+       .|.+.+++...||||+++++.++.++  ....+....+ ..   ...++++.+|+  +++
T Consensus         2 ~~p~~v~y~~~~~~~~~n~g~y~~~~~~~~~~d~v~~~~a~i~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--~g~   79 (265)
T d1edta_           2 QGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAANINYDTGTKTAYLHFNENVQRVLDNAVTQIRPLQQ--QGI   79 (265)
T ss_dssp             CSCEEEEEEETTTSCGGGGGGEEETTTCSBSCSEEEEEEEEEEEETTTTEEEEECCHHHHHHHHTHHHHTHHHHH--TTC
T ss_pred             CCCEEEEEEEeccccCCcCCeeeeccCCCcceeEEEEeeeecccCCCCCeeEEecCcchhhhhhhHHHHHHHHHh--CCC
Confidence            4689999999985       57888999999999999999887542  2333332221 11   23344444544  579


Q ss_pred             eEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCC------CCCCccchhhhHHHHHHHHh
Q 008332           91 TTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPN------TSTDMFNIGLLFDEWRIAAT  164 (570)
Q Consensus        91 kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~------~~~~~~~~~~l~~~lr~~l~  164 (570)
                      ||++|||||..  +..|+.+ .+++.|++||+++++++++|+|||||||||||.      ..+++.+|+.|+++||+++.
T Consensus        80 KvllsiGG~~~--~~~f~~~-~s~~~~~~Fa~~~~~~~~~~~~DGiDiD~Eyp~~~~~~~~~~d~~~~~~ll~~lR~~l~  156 (265)
T d1edta_          80 KVLLSVLGNHQ--GAGFANF-PSQQAASAFAKQLSDAVAKYGLDGVDFDDEYAEYGNNGTAQPNDSSFVHLVTALRANMP  156 (265)
T ss_dssp             EEEEEEEECTT--SCCTTCC-SSHHHHHHHHHHHHHHHHHHTCCEEEEECSSCCTTGGGCCCCCSSHHHHHHHHHHHHCT
T ss_pred             EEEEEEccCcC--CCCceec-CCHHHHHHHHHHHHHHHHhcCCCceEeccccCcccCCCCCcccHHHHHHHHHHHHHhhh
Confidence            99999999864  3458776 478999999999999999999999999999994      34678899999999999985


Q ss_pred             hhhhcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCC
Q 008332          165 KLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST  218 (570)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~  218 (570)
                                ...+++++..+ ......++..   +..||+++|+||+||+|..
T Consensus       157 ----------~~~is~a~~~~-~~~~~~~~~~---~~~d~id~m~YD~~g~w~~  196 (265)
T d1edta_         157 ----------DKIISLYNIGP-AASRLSYGGV---DVSDKFDYAWNPYYGTWQV  196 (265)
T ss_dssp             ----------TSEEEEESCHH-HHTCCEETTE---ECGGGCSEEECCSTTEECC
T ss_pred             ----------hcEEEEEecCC-hhhhcCcCHh---HhcCeEEEEeccCCCcCCC
Confidence                      33444333222 2222344443   4568888999999998863

>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Hevamine A (chitinase/lysozyme)
species: Para rubber tree (Hevea brasiliensis) [TaxId: 3981]

Probab=99.95  E-value=8.8e-28  Score=231.19  Aligned_cols=210  Identities=12%  Similarity=0.023  Sum_probs=131.6

Q ss_pred             EEEEEecCCC-CCcCCC-CCCCCcceEEEEeEEEeCCceEEeeCCC-------ccHHHHHHHHHHHHhhCCCceEEEEEc
Q 008332           27 IRVGYLNLSE-VSTISG-INYDLFTHLICSSADINSTTYQLSLSLP-------SDENQIAKFADTVKKKNPSITTILSIG   97 (570)
Q Consensus        27 ~vvgY~~~~~-~~~~~~-i~~~~~Thii~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~lk~~~~~~kvllsig   97 (570)
                      .|++||-.+. ...+.+ .+...||||+++|+.+.+++....+...       .....+.+.++.+|+  +++||+||||
T Consensus         2 ~~~~YWg~~~~~~~l~~~c~~~~~~~I~laF~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~I~~~q~--~g~KVllSiG   79 (273)
T d2hvma_           2 GIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQI--QGIKVMLSLG   79 (273)
T ss_dssp             EEEEEESSCGGGCCHHHHHHTSCCSEEEEEEEEECSTTCCCEECCGGGCCCGGGTTTTHHHHHHHHHH--TTCEEEEEEE
T ss_pred             CEEEEcCCCCCCCchHHHcCCCCCCEEEEEEEeEECCCCeeeccccccCCCccCchhhHHHHHHHHHh--CCCEEEEEEe
Confidence            4788985432 222222 2346799999999998887644333211       112335555554544  5799999999


Q ss_pred             CCCCCCc----ccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhccccc
Q 008332           98 QGKDTNY----SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTR  173 (570)
Q Consensus        98 g~~~~~~----~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~~~~  173 (570)
                      ||+....    ..+..++.+...|..|++++++++++|+|||||||||+|..    .+|..|+++||+.++.        
T Consensus        80 G~~~~~~~~s~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~DGiDiD~E~~~~----~~~~~li~~Lr~~~~~--------  147 (273)
T d2hvma_          80 GGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGST----LYWDDLARYLSAYSKQ--------  147 (273)
T ss_dssp             CSSCCCCCCSHHHHHHHHHHHHHHTSSSCCSCCTTCSCCCSEEEEECCSSCC----SSHHHHHHHHHHGGGG--------
T ss_pred             cCCCCccccCHHHHHHHHHhHHHHhccchhhhhhhhcccccceeeccccCcc----hhHHHHHHHHHhhhcc--------
Confidence            9864221    11223333444444445555668999999999999999843    5899999999987752        


Q ss_pred             ccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHcCCCC
Q 008332          174 QQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSA  253 (570)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~gvp~  253 (570)
                       ...+.+++++........+.......++||+++|+||+++.+... .+             .........+|. .|+|+
T Consensus       148 -~~~~~it~ap~~~~~~~~~~~~~~~~~~D~invq~Yn~~~~~~~~-~~-------------~~~~~~~~~~~~-~g~~~  211 (273)
T d2hvma_         148 -GKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSS-GN-------------INNIINSWNRWT-TSINA  211 (273)
T ss_dssp             -SSCCEEEECCBSSSSCTTTHHHHHTTCCSEEEEECSSCGGGSCBT-TB-------------CHHHHHHHHHHH-HHCCC
T ss_pred             -CCeEEEEeccccccchhhhHHHhhcCcccEEEEEeecCCCccccc-cc-------------hhHHHHHHHHHh-hcCCc
Confidence             334455554433222333333344688999999999998765421 10             012223334444 58999


Q ss_pred             Cceeeeccccccc
Q 008332          254 DKLVMCLPFYGYA  266 (570)
Q Consensus       254 ~KlvlGip~yG~~  266 (570)
                      +||+||+|+|+..
T Consensus       212 ~KivlGlp~~~~~  224 (273)
T d2hvma_         212 GKIFLGLPAAPEA  224 (273)
T ss_dssp             SEEEEEEESSGGG
T ss_pred             ccEEEEEecCCCC
Confidence            9999999988764

>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Endo-beta-N-acetylglucosaminidase
species: Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]

Probab=99.94  E-value=8.9e-29  Score=239.07  Aligned_cols=178  Identities=16%  Similarity=0.133  Sum_probs=131.4

Q ss_pred             CCCCeEEEEEecCCC-------CCcCCCCCCCCcceEEEEeEEEeCCce--EEeeCCCcc-H---HHHHHHHHHHHhhCC
Q 008332           22 KAKPWIRVGYLNLSE-------VSTISGINYDLFTHLICSSADINSTTY--QLSLSLPSD-E---NQIAKFADTVKKKNP   88 (570)
Q Consensus        22 ~~~~~~vvgY~~~~~-------~~~~~~i~~~~~Thii~~~~~~~~~~~--~~~~~~~~~-~---~~~~~~~~~lk~~~~   88 (570)
                      .+.+.+++||++.++       .|.+.+++...||||+++|+.++.++.  ...+....+ .   ..+.++++.++  ++
T Consensus         2 ~~~~~~~~~y~~~~~~n~~n~~~~~~~~~~~~~~d~v~~~~a~i~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~q--~~   79 (285)
T d2ebna_           2 TKANIKLFSFTEVNDTNPLNNLNFTLKNSGKPLVDMVVLFSANINYDAANDKVFVSNNPNVQHLLTNRAKYLKPLQ--DK   79 (285)
T ss_dssp             CCCSCEEEEEEETTTCCGGGGGGEEETTTCCBSCCEEEEEEEEEEEETTTTEEEEECCHHHHHHHHTHHHHTHHHH--HT
T ss_pred             CcCCceEEEEEEccCCCccccccceeecCCCCcccEEEEEeeeccCCcCCceeeeccCcchhhhhhhHHHHHHHHH--hC
Confidence            356678999999775       567888888899999999999986543  232222111 1   11344444454  45


Q ss_pred             CceEEEEEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCC---------CCCccchhhhHHHH
Q 008332           89 SITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT---------STDMFNIGLLFDEW  159 (570)
Q Consensus        89 ~~kvllsigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~---------~~~~~~~~~l~~~l  159 (570)
                      ++||+||||||..  +..|+.+  +++.|++|++++++++++|+|||||||||||..         ..++.+|..|+++|
T Consensus        80 g~KvllsigG~~~--~~~~~~~--~~~~~~~F~~~~~~~~~~y~lDGiDiD~Ey~~~~~~~~~~~~~~~~~~~~~li~eL  155 (285)
T d2ebna_          80 GIKVILSILGNHD--RSGIANL--STARAKAFAQELKNTCDLYNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYET  155 (285)
T ss_dssp             TCEEEEEEECCSS--SCCTTCB--CHHHHHHHHHHHHHHHHHHTCCEEEEECCSCCCCSSCCTTBCCCCHHHHHHHHHHH
T ss_pred             CCEEEEEeccCCC--CcccccC--CHHHHHHHHHHHHHHHHHcCCcEEeccccCccccCCCccccCcchHHHHHHHHHHH
Confidence            8999999999864  3347665  788999999999999999999999999999852         34678899999999


Q ss_pred             HHHHhhhhhcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCC
Q 008332          160 RIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST  218 (570)
Q Consensus       160 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~  218 (570)
                      |+++.          ...+++++..........++   ..+++|+|++|+||++|.|..
T Consensus       156 r~~~~----------~~~lt~a~~~~~~~~~~~~~---~~~~~d~id~m~Yd~~g~w~~  201 (285)
T d2ebna_         156 KQAMP----------NKLVTVYVYSRTSSFPTAVD---GVNAGSYVDYAIHDYGGSYDL  201 (285)
T ss_dssp             HHHCT----------TSEEEEEESGGGSCCCSCBT---TBCGGGTCSEEEECTTCCSCC
T ss_pred             HHHCC----------CCeEEEEEecccccccccch---HHHHhhheeEEeecccCccCC
Confidence            99986          45566655554443333343   457899999999999998764

>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Xylanase inhibitor protein I, XIP-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=99.92  E-value=7.1e-25  Score=210.21  Aligned_cols=202  Identities=14%  Similarity=0.063  Sum_probs=127.7

Q ss_pred             eEEEEEecC-CCCCcCCCC-CCCCcceEEEEeEEEeCCceEEeeCCC-ccHHHHHHHHHHHHhhCCCceEEEEEcCCCCC
Q 008332           26 WIRVGYLNL-SEVSTISGI-NYDLFTHLICSSADINSTTYQLSLSLP-SDENQIAKFADTVKKKNPSITTILSIGQGKDT  102 (570)
Q Consensus        26 ~~vvgY~~~-~~~~~~~~i-~~~~~Thii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~  102 (570)
                      ..+++||-. .+..++.+. +...+|||+++|+.+.+++....+... .....+..-++.+++  +++|||||||||...
T Consensus         6 ~~i~~YWGq~~~~~~L~~~c~~~~~~~I~laF~~~~~~~~~~~~~~~~~~~~~~~~~I~~~q~--~g~KVllSiGG~~~~   83 (274)
T d1ta3a_           6 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQS--KGVPVSLSIGGYGTG   83 (274)
T ss_dssp             CCEEEEESSCGGGCCHHHHHHTTCCSEEEEEEEEEBSSSSCCEECCTTCCGGGHHHHHHHHHH--TTCCEEEEEEESSSC
T ss_pred             CcEEEEcCCCCCCCChHHHcCCCCCCEEEEEEEEEcCCCCeeeccCCCCChhHHHHHHHHHHh--CCCEEEEEEcCCCCC
Confidence            357889843 222233332 235699999999988765544433321 123345555554544  479999999998642


Q ss_pred             CcccccccccChHHHHHHHH------------HHHHHHHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhhhhcc
Q 008332          103 NYSIYSSMVRNSSHRKSFID------------SSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKN  170 (570)
Q Consensus       103 ~~~~f~~~~~~~~~r~~fi~------------siv~~~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~~~~~  170 (570)
                        ..|    .+....+.|++            ++++++++|+|||||||||+|.   +..++..|+++||+.+++..   
T Consensus        84 --~~~----~~~~~~~~~a~~l~~~~~~~~~~s~~~~~~~~~~DGiDiD~E~~~---~~~~~~~li~~Lr~~~~~~~---  151 (274)
T d1ta3a_          84 --YSL----PSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGT---PADRYDVLALELAKHNIRGG---  151 (274)
T ss_dssp             --BCC----CSHHHHHHHHHHHHHHHSSCCCTTSCCTTTTCCCSEEEEEESSCC---TTCCHHHHHHHHHTTCCSSS---
T ss_pred             --ccc----cchhHHHHHHHHHHHhhcccchhhHHHHhhccceeeEEeccccCC---CcchHHHHHHHHHHHHhhcc---
Confidence              222    23344444544            5567899999999999999984   34689999999997665321   


Q ss_pred             cccccceEEEEeecccCCCC-CccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHc
Q 008332          171 STRQQSLLILTARFRYSPPA-NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIER  249 (570)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~~~~  249 (570)
                         ....+.+++++...... ..........++|++++|.||.++.+..                 ......+++.|.+ 
T Consensus       152 ---~~~~~litaAp~~~~~~~~~~~~~~~~~~fD~i~vq~Yn~~~~~~~-----------------~~~~~~s~~~w~~-  210 (274)
T d1ta3a_         152 ---PGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQ-----------------NLGWEGSWDKWTA-  210 (274)
T ss_dssp             ---SSCCCEEEEEECSSSSCCHHHHHHHTTSCCCEEEEECSSCCTTSBT-----------------TBBHHHHHHHHHH-
T ss_pred             ---CCCceEEEecccCccCchhhhhhhhhccccceEEEEEecCCCCCCC-----------------ChHHHHHHHHHHh-
Confidence               13334555544332222 1122222345789999999998654321                 1245667788874 


Q ss_pred             CCCCCceeeeccc
Q 008332          250 GLSADKLVMCLPF  262 (570)
Q Consensus       250 gvp~~KlvlGip~  262 (570)
                      |+|++||+||+|.
T Consensus       211 ~~p~~Ki~lGlPa  223 (274)
T d1ta3a_         211 AYPATRFYVGLTA  223 (274)
T ss_dssp             HCTTSEEEEEEEC
T ss_pred             cCCCceEEEeecc
Confidence            6999999999995

>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Seed storage protein
species: Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]

Probab=99.91  E-value=1.6e-24  Score=208.85  Aligned_cols=208  Identities=13%  Similarity=0.039  Sum_probs=127.5

Q ss_pred             eEEEEEecCCCCCcCCCC-CCCCcceEEEEeEEEeCCce---EEeeCCC------ccHHHHHHHHHHHHhhCCCceEEEE
Q 008332           26 WIRVGYLNLSEVSTISGI-NYDLFTHLICSSADINSTTY---QLSLSLP------SDENQIAKFADTVKKKNPSITTILS   95 (570)
Q Consensus        26 ~~vvgY~~~~~~~~~~~i-~~~~~Thii~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~lk~~~~~~kvlls   95 (570)
                      ..|+.||-.++.-++.+. +...++||+++|+...+++.   .+.+...      ..-..+.+-++.++++  ++||+||
T Consensus         5 ~~v~vYWgq~~~g~L~~~c~~~~~diI~laF~~~~~~~~~~p~~n~~~~~~~~~~~~~~~l~~dI~~~q~~--G~KVllS   82 (283)
T d1cnva_           5 TEIAVYWGQREDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFLESQIKECQRM--GVKVFLA   82 (283)
T ss_dssp             CEEEEEECSGGGCCHHHHHHTCCCSEEEEEEECEECTTCSSCCCCBTTTBBTTTTBCGGGGHHHHHHHHHT--TCEEEEE
T ss_pred             CCEEEECCCCCCCCHHHHccCCCCCEEEEEEEeeeCCCCCCcceecccCCCcccCCchHHHHHHHHHHHhC--CCEEEEE
Confidence            455669976543333332 13469999999997665431   1122111      1224456666666555  7999999


Q ss_pred             EcCCCCCCcccccccccChHHHHHHHHHHHHH---------HHHcCCCceeeeccCCCCCCCccchhhhHHHHHHHHhhh
Q 008332           96 IGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRI---------ARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL  166 (570)
Q Consensus        96 igg~~~~~~~~f~~~~~~~~~r~~fi~siv~~---------~~~~~~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~~  166 (570)
                      |||+...      .-+.+....+.|++.+.+.         +.+++|||||||||+|.......++..+++++|..+.  
T Consensus        83 lGG~~~~------~~~~~~~~a~~fa~~~~~~~~~~~~~~~~~~~~lDGiDiD~E~p~~~~~~~~~~~~l~~l~~~~~--  154 (283)
T d1cnva_          83 LGGPKGT------YSACSADYAKDLAEYLHTYFLSERREGPLGKVALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQ--  154 (283)
T ss_dssp             EECSSSE------ECCCSHHHHHHHHHHHHHHHBSSSSCBTTBSCBCSEEEEECSSCSCSTTHHHHHHHHHHHHHHHT--
T ss_pred             ecCCCCC------cccccHHHHHHHHHHHHHhhcCccccccccccccCcccccccCCCCcccHHHHHHHHHHHHHhcC--
Confidence            9998642      1244666778899988664         6889999999999999655555566666666665553  


Q ss_pred             hhcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCCCCCCccCHHHHHHHH
Q 008332          167 DAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAW  246 (570)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~~~~~~~~v~~~v~~~  246 (570)
                               ..+.+++++........+.......++|||++|+||.++.+..     ...        .....+....+.
T Consensus       155 ---------~~~~it~AP~~~~~d~~~~~~~~~~~~D~i~vq~Yn~~~~~~~-----~~~--------~~~~~~~~~~~~  212 (283)
T d1cnva_         155 ---------STFLLSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYNDRSCQYS-----TGN--------IQRIRNAWLSWT  212 (283)
T ss_dssp             ---------CCCEEEECCBSSSSCTTTHHHHTTTCCSEEEEECSSCTTTSCB-----TTB--------CHHHHHHHHHHH
T ss_pred             ---------CCeEEEeccCCccCchhhHHHhhcccccEEEEEeccCCcccCC-----Ccc--------HHHHHHHHHHHH
Confidence                     2233444332221222222222347899999999997653221     111        012344444555


Q ss_pred             HHcCCCCCceeeecccccc
Q 008332          247 IERGLSADKLVMCLPFYGY  265 (570)
Q Consensus       247 ~~~gvp~~KlvlGip~yG~  265 (570)
                      ...+.|++|+++|+|++..
T Consensus       213 ~~~~~~~~k~~lGlp~~~~  231 (283)
T d1cnva_         213 KSVYPRDKNLFLELPASQA  231 (283)
T ss_dssp             HHSSSCSSCEEEEEESSGG
T ss_pred             HhcCCCccceEEEecCCCc
Confidence            5678999999999997654

>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Endo-beta-N-acetylglucosaminidase
species: Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]

Probab=99.78  E-value=8.1e-19  Score=169.52  Aligned_cols=203  Identities=12%  Similarity=0.035  Sum_probs=122.7

Q ss_pred             eEEEEEecCCC---CCcCCCCCCCCcceEEEEeEEEeC--Cce------EEeeCCCccHHHHHHHHHHHHhhCCCceEEE
Q 008332           26 WIRVGYLNLSE---VSTISGINYDLFTHLICSSADINS--TTY------QLSLSLPSDENQIAKFADTVKKKNPSITTIL   94 (570)
Q Consensus        26 ~~vvgY~~~~~---~~~~~~i~~~~~Thii~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~lk~~~~~~kvll   94 (570)
                      -++||||..|.   .+.++++| +.++.|+++|+....  +..      .+... ......+...++.++++  ++||++
T Consensus         2 ~~~~~y~~~~~~~~~~~l~~~p-~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~q~~--g~kVll   77 (282)
T d1eoka_           2 GVCIAYYITDGRNPTFKLKDIP-DKVDMVILFGLKYWSLQDTTKLPGGTGMMGS-FKSYKDLDTQIRSLQSR--GIKVLQ   77 (282)
T ss_dssp             CEEEEEEECSCSSTTSCGGGCC-TTCCEEEEESSCHHHHHCTTSSCTTSGGGTT-CSSHHHHHHHHHHHHTT--TCEEEE
T ss_pred             CeEEEEEeccCCCCceeeccCC-CCCCEEEEEccccccccccccccCCcceeec-ccchhHHHHHHHHHhhc--CceEEE
Confidence            37899999996   56777776 568888888864431  110      01110 11234455666656554  799999


Q ss_pred             EEcCCCCCCcccccccccChHHHHHHHHHHHHHHHHcCCCceeeeccCCCCCCC-----------------------ccc
Q 008332           95 SIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTD-----------------------MFN  151 (570)
Q Consensus        95 sigg~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~~~DGidiDwE~p~~~~~-----------------------~~~  151 (570)
                      ||||+....   ......+.+.++.+.+.+.+++++|+|||||||||+|....+                       ..+
T Consensus        78 SiGG~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~yglDGiDiD~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (282)
T d1eoka_          78 NIDDDVSWQ---SSKPGGFASAAAYGDAIKSIVIDKWKLDGISLDIEHSGAKPNPIPTFPGYAATGYNGWYSGSMAATPA  154 (282)
T ss_dssp             EEECCGGGG---SSSGGGSSSHHHHHHHHHHHHTTTTCCCEEEEECCCCCCCCSSCCCCCCHHHHSCSSCCTTSCCCCHH
T ss_pred             EEecCCCCC---ccCCccHHHHHHHHHHHHHHHHHHhCCCceeecccCCcccCCchhhhhhhhhhhhhhhhhcccccchh
Confidence            999975311   122334556777788888899999999999999999853221                       123


Q ss_pred             hhhhHHHHHHHHhhhhhcccccccceEEEEeecccCCCCCccChHHHhhhhceeeeecccCCCCCCCCCCCCCCCCCCCC
Q 008332          152 IGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSI  231 (570)
Q Consensus       152 ~~~l~~~lr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vD~i~vm~yd~~~~~~~~~~~~~a~l~~~~  231 (570)
                      +...+.+++..+..       .......+..............+......+||+++|+|+..+                 
T Consensus       155 ~~~~~a~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~q~Y~~~~-----------------  210 (282)
T d1eoka_         155 FLNVISELTKYFGT-------TAPNNKQLQIASGIDVYAWNKIMENFRNNFNYIQLQSYGANV-----------------  210 (282)
T ss_dssp             HHHHHHHHTTTSST-------TSSSCCEEEEEECTTSTTHHHHHHHHTTTCSEEEECCTTCCH-----------------
T ss_pred             cchhHHHHHHhhcc-------ccCcceEEEeecCccccccccchhccccccceeeeeeecccC-----------------
Confidence            44444444433321       111122222222222222233456778899999999997543                 


Q ss_pred             CCCCccCHHHHHHHHH--HcCCCCCceeeecccccc
Q 008332          232 SGRFARSTDQVLKAWI--ERGLSADKLVMCLPFYGY  265 (570)
Q Consensus       232 ~~~~~~~v~~~v~~~~--~~gvp~~KlvlGip~yG~  265 (570)
                            +....+..|.  ..++|++|+++|+|.++.
T Consensus       211 ------~~~~~~~~~~~~~~~~pa~k~~~G~~~~~~  240 (282)
T d1eoka_         211 ------SRTQLMMNYATGTNKIPASKMVFGAYAEGG  240 (282)
T ss_dssp             ------HHHHHHHHHHHHTSCCCGGGEEEEECTTTC
T ss_pred             ------CchhhHHhhhhccCCCCccceEeeecCCCC
Confidence                  2233334443  357999999999986654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.6e-15  Score=141.73  Aligned_cols=91  Identities=24%  Similarity=0.474  Sum_probs=81.9

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      ++|++.+.||+|+||.||+|...+++.||||+++.. ....++|.+|+.++.+++|||||+++|+|..++..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            468888999999999999999888889999999643 3345789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCC
Q 008332          544 NKSLDCYLFGLS  555 (570)
Q Consensus       544 ~GsL~~~L~~~~  555 (570)
                      +|+|.+++...+
T Consensus        84 ~g~L~~~l~~~~   95 (263)
T d1sm2a_          84 HGCLSDYLRTQR   95 (263)
T ss_dssp             TCBHHHHHHTTT
T ss_pred             CCcHHHHhhccc
Confidence            999999998653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=1.4e-15  Score=146.48  Aligned_cols=107  Identities=30%  Similarity=0.468  Sum_probs=88.6

Q ss_pred             HHHHHhcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          458 DIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       458 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      +++...++|++.+.||+|+||.||+|.. .+++.||||+++.. ....++|.+|+.+|.+++|||||+++|+|...+..+
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeE
Confidence            3445567799999999999999999996 45889999999643 334678999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +|||||++|+|.++|.+..  ...+++.+++
T Consensus        90 iv~E~~~~g~l~~~l~~~~--~~~~~~~~~~  118 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECN--RQEVSAVVLL  118 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSC--TTTSCHHHHH
T ss_pred             EEeecccCcchHHHhhhcc--ccchHHHHHH
Confidence            9999999999999998643  2345554443

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.7e-15  Score=144.69  Aligned_cols=106  Identities=29%  Similarity=0.400  Sum_probs=86.6

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++...++|++.+.||+|+||.||+|..++++.||||+++.. ....+.|.+|+.+|.+++|||||+++|++. .++.++|
T Consensus         8 wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv   85 (272)
T d1qpca_           8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII   85 (272)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             eecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEE
Confidence            34456778899999999999999999887889999999643 334578999999999999999999999874 5677999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      |||+++|+|.++++...  ...+++.++++
T Consensus        86 ~Ey~~~g~L~~~~~~~~--~~~l~~~~~~~  113 (272)
T d1qpca_          86 TEYMENGSLVDFLKTPS--GIKLTINKLLD  113 (272)
T ss_dssp             EECCTTCBHHHHTTSHH--HHTCCHHHHHH
T ss_pred             EEeCCCCcHHHHHhhcC--CCCCCHHHHHH
Confidence            99999999999987532  33456665544

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.4e-15  Score=141.38  Aligned_cols=104  Identities=23%  Similarity=0.329  Sum_probs=83.9

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC--CeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv  538 (570)
                      ++|++.+.||+|+||.||+|. ..+|+.||+|.+....  ....+.|.+|+.+|.+++|||||++++++...  ..++||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            568889999999999999998 4668999999996433  33456799999999999999999999998753  468999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||||++|+|.+++.+.......+++.++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~  112 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVL  112 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHH
Confidence            99999999999998644444455555544

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=9.8e-15  Score=138.00  Aligned_cols=91  Identities=27%  Similarity=0.445  Sum_probs=81.5

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP  543 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  543 (570)
                      ++|++.+.||+|+||.||+|+.++++.||||.++... ...++|++|+.++.+++||||++++|+|..+...++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            5688889999999999999999888899999997543 345789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCC
Q 008332          544 NKSLDCYLFGLS  555 (570)
Q Consensus       544 ~GsL~~~L~~~~  555 (570)
                      +|+|.+++....
T Consensus        83 ~g~l~~~~~~~~   94 (258)
T d1k2pa_          83 NGCLLNYLREMR   94 (258)
T ss_dssp             TEEHHHHHHSGG
T ss_pred             CCcHHHhhhccc
Confidence            999999987543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=6.5e-15  Score=141.23  Aligned_cols=104  Identities=28%  Similarity=0.435  Sum_probs=86.2

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      +..++|++.+.||+|+||.||+|..++++.||||+++.. ....+.|.+|+.+|.+++|||||+++|+| ..++.++|||
T Consensus        14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~-~~~~~~lv~E   91 (285)
T d1fmka3          14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTE   91 (285)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEC
T ss_pred             cCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEE-ecCCeEEEEE
Confidence            345679999999999999999999887888999999643 33457899999999999999999999998 4567899999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      |+++|+|..+++...  ...+++.+++.
T Consensus        92 y~~~g~l~~~~~~~~--~~~l~~~~~~~  117 (285)
T d1fmka3          92 YMSKGSLLDFLKGET--GKYLRLPQLVD  117 (285)
T ss_dssp             CCTTCBHHHHHSHHH--HTTCCHHHHHH
T ss_pred             ecCCCchhhhhhhcc--cccchHHHHHH
Confidence            999999999988632  23466666554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=9.6e-15  Score=140.33  Aligned_cols=91  Identities=22%  Similarity=0.427  Sum_probs=81.8

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      +.|++.+.||+|+||.||+|.. .+++.||||+++.......+.|.+|+.+|++++|||||++++++...+..++|||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            4578889999999999999994 568899999997655556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.+++.+.
T Consensus        92 ~~g~L~~~~~~~  103 (288)
T d2jfla1          92 AGGAVDAVMLEL  103 (288)
T ss_dssp             TTEEHHHHHHHH
T ss_pred             CCCcHHHHHHhc
Confidence            999999998753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2.4e-14  Score=137.25  Aligned_cols=101  Identities=25%  Similarity=0.417  Sum_probs=80.3

Q ss_pred             hcCccccee-eeccCCccEEEEEec---CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          463 TERFSIRNK-LGEGGYGPVYKGVLP---CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       463 ~~~~~~~~~-lg~G~fg~V~~~~~~---~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      ++++.+.+. ||+|+||.||+|..+   .+..||||.++.. .....+.|++|+.+|.+++|||||+++|+|. .+..+|
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~~l   85 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALML   85 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-cCeEEE
Confidence            455677774 999999999999853   3457999999743 3344678999999999999999999999986 456899


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |||||++|+|.+++...+.   .+++.+++
T Consensus        86 vmE~~~~g~L~~~l~~~~~---~l~~~~~~  112 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGKRE---EIPVSNVA  112 (285)
T ss_dssp             EEECCTTEEHHHHHTTCTT---TSCHHHHH
T ss_pred             EEEeCCCCcHHHHhhcccc---CCCHHHHH
Confidence            9999999999999876443   34555444

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2.9e-14  Score=137.08  Aligned_cols=90  Identities=20%  Similarity=0.403  Sum_probs=81.0

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .+|++.+.||+|+||.||+|. ..+|+.||||.+........+.+.+|+.+|++++|||||++++++...+..+||||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            468888999999999999999 4668999999997544455678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 008332          543 PNKSLDCYLFG  553 (570)
Q Consensus       543 ~~GsL~~~L~~  553 (570)
                      ++|+|.+++.+
T Consensus       100 ~gg~L~~~~~~  110 (293)
T d1yhwa1         100 AGGSLTDVVTE  110 (293)
T ss_dssp             TTCBHHHHHHH
T ss_pred             CCCcHHHHhhc
Confidence            99999998875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.50  E-value=3.2e-14  Score=140.42  Aligned_cols=101  Identities=21%  Similarity=0.330  Sum_probs=86.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.+........+.+.+|+.+|.+++|||||++++++...+..+||||||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4688999999999999999994 568999999997655555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCcccccHhhhh
Q 008332          543 PNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       543 ~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++|+|.++|.+...   .+++.++.
T Consensus       106 ~gg~L~~~l~~~~~---~l~e~~~~  127 (350)
T d1koaa2         106 SGGELFEKVADEHN---KMSEDEAV  127 (350)
T ss_dssp             CSCBHHHHHTCTTS---CBCHHHHH
T ss_pred             CCCCHHHHHHhhcC---CCCHHHHH
Confidence            99999999975432   34554443

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.5e-14  Score=137.03  Aligned_cols=91  Identities=23%  Similarity=0.293  Sum_probs=80.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC------cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS------TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~------~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||++....      ....+.|.+|+.+|.+++|||||++++++......+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            5688999999999999999995 568999999985321      123578999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      ||||||++|+|.++|...
T Consensus        90 iv~E~~~gg~L~~~i~~~  107 (293)
T d1jksa_          90 LILELVAGGELFDFLAEK  107 (293)
T ss_dssp             EEEECCCSCBHHHHHHHH
T ss_pred             EEEEcCCCccccchhccc
Confidence            999999999999999853

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=2.1e-14  Score=138.90  Aligned_cols=102  Identities=27%  Similarity=0.432  Sum_probs=82.9

Q ss_pred             cCcccceeeeccCCccEEEEEec-CC---cEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CG---EVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~---~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      .+|++.++||+|+||.||+|... ++   ..||||.+... .....+.|.+|+.+|++++|||||+++|+|..++..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            45777899999999999999953 23   36899998643 344556899999999999999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      ||||++|+|.+++.....   .+++.++++
T Consensus       106 ~Ey~~~g~L~~~~~~~~~---~l~~~~~~~  132 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDG---QFTVIQLVG  132 (299)
T ss_dssp             EECCTTEEHHHHHHTTTT---CSCHHHHHH
T ss_pred             EEecCCCcceeeeccccC---CCCHHHHHH
Confidence            999999999999986433   355555543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.5e-14  Score=137.67  Aligned_cols=90  Identities=27%  Similarity=0.372  Sum_probs=77.1

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+|.+++||||+++++++..++..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            4588889999999999999994 568999999986432 23345689999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhc
Q 008332          542 MPNKSLDCYLFG  553 (570)
Q Consensus       542 ~~~GsL~~~L~~  553 (570)
                      |++|+|.++|..
T Consensus        85 ~~gg~L~~~l~~   96 (271)
T d1nvra_          85 CSGGELFDRIEP   96 (271)
T ss_dssp             CTTEEGGGGSBT
T ss_pred             cCCCcHHHHHhc
Confidence            999999999975

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1e-14  Score=139.33  Aligned_cols=102  Identities=27%  Similarity=0.462  Sum_probs=82.7

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEE
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ...++|++.+.||+|+||.||+|..+  ..||||+++..  .....+.|.+|+.+|.+++|||||+++|++. .+..++|
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv   81 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIV   81 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEE
Confidence            34567888999999999999999854  36999999643  3445678999999999999999999999875 4568999


Q ss_pred             EecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          539 YEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      ||||++|+|.++|+..+.   .+++.++++
T Consensus        82 ~Ey~~~g~L~~~l~~~~~---~~~~~~~~~  108 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIET---KFEMIKLID  108 (276)
T ss_dssp             EECCCEEEHHHHHHTSCC---CCCHHHHHH
T ss_pred             EecCCCCCHHHHHhhccC---CCCHHHHHH
Confidence            999999999999986433   355555543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.5e-14  Score=141.55  Aligned_cols=92  Identities=23%  Similarity=0.237  Sum_probs=81.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .++|++.+.||+|+||.||+|.. .+|+.||+|+++.. .....+.+.+|+.+|.+++|||||++++++......++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            46788999999999999999994 56899999999643 33445679999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      ||++|+|.++|.+.
T Consensus        85 y~~gg~L~~~l~~~   98 (322)
T d1s9ja_          85 HMDGGSLDQVLKKA   98 (322)
T ss_dssp             CCTTEEHHHHHHHH
T ss_pred             cCCCCcHHHHHhhc
Confidence            99999999999853

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.47  E-value=4.2e-14  Score=137.13  Aligned_cols=92  Identities=17%  Similarity=0.267  Sum_probs=76.1

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .+.|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+|.+++|||||++++++...+..+||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            45688999999999999999994 568899999996433 2234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      ||++|+|.++|...
T Consensus        88 ~~~gg~L~~~l~~~  101 (307)
T d1a06a_          88 LVSGGELFDRIVEK  101 (307)
T ss_dssp             CCCSCBHHHHHHTC
T ss_pred             ccCCCcHHHhhhcc
Confidence            99999999999853

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.47  E-value=6.8e-14  Score=138.18  Aligned_cols=101  Identities=23%  Similarity=0.294  Sum_probs=85.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ++|++.+.||+|+||.||+|.. .+|+.||||+++.........+.+|+.+|.+++|||||++++++..++..+||||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4688999999999999999994 569999999997655555567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCcccccHhhhh
Q 008332          543 PNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       543 ~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++|+|.+++....   .+++..++.
T Consensus       109 ~gg~L~~~~~~~~---~~l~e~~~~  130 (352)
T d1koba_         109 SGGELFDRIAAED---YKMSEAEVI  130 (352)
T ss_dssp             CCCBHHHHTTCTT---CCBCHHHHH
T ss_pred             CCChHHHHHHhcC---CCCCHHHHH
Confidence            9999999887542   234544443

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1e-14  Score=138.07  Aligned_cols=101  Identities=25%  Similarity=0.432  Sum_probs=81.5

Q ss_pred             hcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeC-CeeEEEEec
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-EERMLIYEY  541 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e~  541 (570)
                      .++|++.+.||+|+||.||+|..+ |..||||+++..  ...+.|.+|+.++++++||||++++|+|... +..++||||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            456788899999999999999986 889999999643  3446799999999999999999999999654 568999999


Q ss_pred             CCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          542 MPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      +++|+|.++|++.+  ...+++.++++
T Consensus        83 ~~~g~L~~~l~~~~--~~~l~~~~~~~  107 (262)
T d1byga_          83 MAKGSLVDYLRSRG--RSVLGGDCLLK  107 (262)
T ss_dssp             CTTEEHHHHHHHHH--HHHCCHHHHHH
T ss_pred             cCCCCHHHHHHhcC--CCCCCHHHHHH
Confidence            99999999998532  33455555443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.3e-13  Score=134.58  Aligned_cols=90  Identities=19%  Similarity=0.259  Sum_probs=79.6

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      ++|.+.+.||+|+||.||+|.. .+++.||||.++... .....+.+|+.+|..++|||||++++++...+..+||||||
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            5688999999999999999994 568899999996443 23356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcC
Q 008332          543 PNKSLDCYLFGL  554 (570)
Q Consensus       543 ~~GsL~~~L~~~  554 (570)
                      ++|+|.++|...
T Consensus        84 ~gg~L~~~i~~~   95 (321)
T d1tkia_          84 SGLDIFERINTS   95 (321)
T ss_dssp             CCCBHHHHHTSS
T ss_pred             CCCcHHHHHHhc
Confidence            999999999754

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.5e-14  Score=132.14  Aligned_cols=91  Identities=31%  Similarity=0.466  Sum_probs=79.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||+|.. .+++.||+|.+...   .....+.+.+|+.++.+++||||+++++++..++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4588899999999999999995 56889999998532   2234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      |||++|+|.++|.+.
T Consensus        86 Ey~~~g~L~~~l~~~  100 (263)
T d2j4za1          86 EYAPLGTVYRELQKL  100 (263)
T ss_dssp             ECCTTCBHHHHHHHH
T ss_pred             eecCCCcHHHHHhhc
Confidence            999999999999853

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.3e-13  Score=131.67  Aligned_cols=94  Identities=26%  Similarity=0.375  Sum_probs=74.2

Q ss_pred             eeeeccCCccEEEEEecC---CcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecCCC
Q 008332          470 NKLGEGGYGPVYKGVLPC---GEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN  544 (570)
Q Consensus       470 ~~lg~G~fg~V~~~~~~~---~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  544 (570)
                      +.||+|+||.||+|.++.   ++.||||+++...  ....+.|++|+.+|.+++|||||+++|+|. .+..+||||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-cCCEEEEEEcCCC
Confidence            479999999999998543   4589999996432  233567999999999999999999999985 4567899999999


Q ss_pred             CCHHHHHhcCCCCcccccHhhhhc
Q 008332          545 KSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       545 GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      |+|.+++++.+    .+++.++++
T Consensus        92 g~L~~~l~~~~----~l~~~~~~~  111 (277)
T d1xbba_          92 GPLNKYLQQNR----HVKDKNIIE  111 (277)
T ss_dssp             EEHHHHHHHCT----TCCHHHHHH
T ss_pred             CcHHHHHhhcc----CCCHHHHHH
Confidence            99999998643    345555443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.3e-13  Score=134.03  Aligned_cols=91  Identities=29%  Similarity=0.476  Sum_probs=76.1

Q ss_pred             cCcccceeeeccCCccEEEEEec-CCc--EEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLP-CGE--VIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~-~~~--~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++|++.++||+|+||.||+|... ++.  .||||.++.. .....+.|.+|+.+|.++ +|||||+++|+|...+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            56888899999999999999954 344  5788988543 334456799999999998 799999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      |||+++|+|.++|+..
T Consensus        90 ~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             ECCCTTCBHHHHHHTT
T ss_pred             EEecCCCcHHHHHhhc
Confidence            9999999999999865

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.7e-13  Score=130.21  Aligned_cols=88  Identities=25%  Similarity=0.367  Sum_probs=74.5

Q ss_pred             ccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEe----CCeeEEEE
Q 008332          467 SIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCID----SEERMLIY  539 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv~  539 (570)
                      +..+.||+|+||.||+|.. .+++.||+|.+...  .....+.|.+|+.+|++++|||||++++++..    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            5567899999999999995 56889999998632  33445679999999999999999999999875    24579999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+++|+|.++|.+.
T Consensus        92 E~~~~g~L~~~l~~~  106 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF  106 (270)
T ss_dssp             ECCCSCBHHHHHHHH
T ss_pred             eCCCCCcHHHHHhcc
Confidence            999999999999853

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=9.5e-14  Score=133.18  Aligned_cols=91  Identities=22%  Similarity=0.261  Sum_probs=80.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||+|.. .+++.||||++...   .....+.+.+|+.+|.+++||||+++++++...+..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4688999999999999999995 56899999998532   2234567999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      |||++|+|.+++...
T Consensus        88 Ey~~gg~L~~~~~~~  102 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI  102 (288)
T ss_dssp             CCCTTEEHHHHHHHH
T ss_pred             EccCCCCHHHhhhcc
Confidence            999999999998854

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.42  E-value=1.7e-13  Score=130.64  Aligned_cols=100  Identities=23%  Similarity=0.219  Sum_probs=82.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcc---------cHHHHHHHHHHHHccC-CCCccceeEEEEeC
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQ---------GFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDS  532 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~---------~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~  532 (570)
                      ++|++.+.||+|+||+||+|+. .+++.+|||+++.....         ..+.+++|+.+|.+++ ||||+++++++..+
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5688899999999999999994 56889999998643211         1246889999999996 99999999999999


Q ss_pred             CeeEEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          533 EERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       533 ~~~~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ...+||||||++|+|.++|+.+.    .+++.+..
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~----~l~e~~~~  113 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKV----TLSEKETR  113 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS----SCCHHHHH
T ss_pred             cceEEEEEcCCCchHHHHHHhcC----CCCHHHHH
Confidence            99999999999999999997532    34554443

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=8.2e-14  Score=136.43  Aligned_cols=97  Identities=28%  Similarity=0.397  Sum_probs=80.1

Q ss_pred             HHHhcCcccceeeeccCCccEEEEEecC-C-----cEEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCccceeEEEEe
Q 008332          460 EAATERFSIRNKLGEGGYGPVYKGVLPC-G-----EVIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID  531 (570)
Q Consensus       460 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~-~-----~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~  531 (570)
                      +...++|++.+.||+|+||.||+|+... +     ..||||.+... .......|.+|+.+|.++ +|||||++++++..
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~  112 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL  112 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee
Confidence            4456789999999999999999998532 2     26999998643 333446799999999998 89999999999999


Q ss_pred             CCeeEEEEecCCCCCHHHHHhcCCC
Q 008332          532 SEERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       532 ~~~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      .+..++|||||++|+|.++|+.++.
T Consensus       113 ~~~~~lv~Ey~~~g~L~~~l~~~~~  137 (325)
T d1rjba_         113 SGPIYLIFEYCCYGDLLNYLRSKRE  137 (325)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTT
T ss_pred             CCeEEEEEEcCCCCcHHHHHHhccC
Confidence            9999999999999999999987654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.4e-14  Score=136.65  Aligned_cols=97  Identities=29%  Similarity=0.512  Sum_probs=82.9

Q ss_pred             HHHHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEE
Q 008332          458 DIEAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCI  530 (570)
Q Consensus       458 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~  530 (570)
                      +++...++|++.+.||+|+||.||+|..+      .++.||||+++.. .......|.+|+.++.+++||||++++|+|.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            34555678999999999999999999853      2568999999643 3344457999999999999999999999999


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~  554 (570)
                      ..+..++|||||++|+|.++++..
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~  117 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSL  117 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHH
T ss_pred             cCCceeEEEeecCCCCHHHHHHhc
Confidence            999999999999999999998843

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.41  E-value=1.4e-13  Score=133.26  Aligned_cols=99  Identities=26%  Similarity=0.509  Sum_probs=85.0

Q ss_pred             HHHHHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEE
Q 008332          457 ADIEAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFC  529 (570)
Q Consensus       457 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~  529 (570)
                      .+++.++++|++.+.||+|+||.||+|+..      +++.||||+++... ....+.|.+|+.+|++++||||++++++|
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            345556788999999999999999999853      34689999997433 33456799999999999999999999999


Q ss_pred             EeCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          530 IDSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       530 ~~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      ......++++||+++|+|.++|+..+
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~  111 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMS  111 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcC
Confidence            99999999999999999999998644

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.6e-13  Score=131.66  Aligned_cols=102  Identities=27%  Similarity=0.433  Sum_probs=82.9

Q ss_pred             hcCcccceeeeccCCccEEEEEecCC-----cEEEEEEecCC-CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVLPCG-----EVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~~~~-----~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ..+|+..++||+|+||.||+|.++..     ..||||++... ......+|++|+.++.+++|||||+++|+|...+..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            35678889999999999999986432     37999999643 3334567999999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      +|||||.+|+|.+++.+...   .+++.+++
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~---~~~~~~~~  113 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDG---EFSVLQLV  113 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTT---CSCHHHHH
T ss_pred             EEEEecccCcchhhhhcccc---cccHHHHH
Confidence            99999999999999886543   34544443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.40  E-value=1.4e-13  Score=133.32  Aligned_cols=99  Identities=25%  Similarity=0.367  Sum_probs=81.7

Q ss_pred             CcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---ccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      .|+..+.||+|+||.||+|. ..+++.||||++.....   ...+.|.+|+.+|.+++|||||++++++..++..++|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            48888999999999999998 46688999999964332   234579999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||++|+|..++....    ++++.++.
T Consensus        96 ~~~~g~l~~~~~~~~----~l~e~~~~  118 (309)
T d1u5ra_          96 YCLGSASDLLEVHKK----PLQEVEIA  118 (309)
T ss_dssp             CCSEEHHHHHHHHTS----CCCHHHHH
T ss_pred             ecCCCchHHHHHhCC----CCCHHHHH
Confidence            999999987766432    34555443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.2e-13  Score=134.51  Aligned_cols=97  Identities=26%  Similarity=0.385  Sum_probs=83.1

Q ss_pred             HHHHhcCcccceeeeccCCccEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEE
Q 008332          459 IEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCI  530 (570)
Q Consensus       459 ~~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~  530 (570)
                      ++...+++++.+.||+|+||.||+|+.      ..++.||||+++... ......|.+|+.++.++ +|||||+++|+|.
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~   97 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence            445567899999999999999999985      235689999997533 34456799999999999 6999999999999


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .+...++|||||++|+|.++|++.+
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~  122 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKR  122 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhcc
Confidence            9999999999999999999998654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=6.9e-13  Score=128.68  Aligned_cols=88  Identities=27%  Similarity=0.524  Sum_probs=74.4

Q ss_pred             ceeeeccCCccEEEEEecCC----cEEEEEEecC-CCcccHHHHHHHHHHHHccCCCCccceeEEEEeC-CeeEEEEecC
Q 008332          469 RNKLGEGGYGPVYKGVLPCG----EVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-EERMLIYEYM  542 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~~~~----~~vavK~l~~-~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e~~  542 (570)
                      .++||+|+||+||+|.+...    ..||||+++. ......++|.+|+.+|.+++||||++++|+|... ...++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            57899999999999996432    2689999964 3444567899999999999999999999998875 5789999999


Q ss_pred             CCCCHHHHHhcCCC
Q 008332          543 PNKSLDCYLFGLSH  556 (570)
Q Consensus       543 ~~GsL~~~L~~~~~  556 (570)
                      ++|+|.++++....
T Consensus       112 ~~g~l~~~~~~~~~  125 (311)
T d1r0pa_         112 KHGDLRNFIRNETH  125 (311)
T ss_dssp             TTCBHHHHHHCTTC
T ss_pred             ecCchhhhhccccc
Confidence            99999999986544

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.2e-13  Score=129.93  Aligned_cols=103  Identities=19%  Similarity=0.329  Sum_probs=82.0

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCCee
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER  535 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~  535 (570)
                      ...++|++.+.||+|+||.||+|....    +..||||.++... ....+.|.+|+.+|++++||||++++|++. .+..
T Consensus         4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~   82 (273)
T d1mp8a_           4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   82 (273)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeE
Confidence            345679999999999999999998532    3468999986433 344567999999999999999999999985 5678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          536 MLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++||||+++|+|.+++.....   .+++.+++
T Consensus        83 ~iv~E~~~~g~l~~~~~~~~~---~l~~~~~~  111 (273)
T d1mp8a_          83 WIIMELCTLGELRSFLQVRKY---SLDLASLI  111 (273)
T ss_dssp             EEEEECCTTEEHHHHHHHTTT---TSCHHHHH
T ss_pred             EEEEEeccCCcHHhhhhccCC---CCCHHHHH
Confidence            999999999999999876443   34444443

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.36  E-value=5.9e-13  Score=127.22  Aligned_cols=91  Identities=22%  Similarity=0.266  Sum_probs=77.8

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC---cccHHHHHHHHHHHHccCCCCccceeEEEEeCC----ee
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS---TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE----ER  535 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~----~~  535 (570)
                      ++|++.+.||+|+||.||+|. ..+++.||||+++...   ......|.+|+.++.+++||||+++++++....    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            568899999999999999999 4678999999996432   233457999999999999999999999987654    37


Q ss_pred             EEEEecCCCCCHHHHHhcC
Q 008332          536 MLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       536 ~lv~e~~~~GsL~~~L~~~  554 (570)
                      +|||||+++|+|.+++...
T Consensus        87 ~lvmE~~~g~~L~~~~~~~  105 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTE  105 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHH
T ss_pred             EEEEECCCCCEehhhhccc
Confidence            8999999999999998753

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=6.9e-13  Score=128.30  Aligned_cols=96  Identities=24%  Similarity=0.349  Sum_probs=75.0

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHH--HHHccCCCCccceeEEEEeCC----eeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVM--LTAKLQHVNLIRVLGFCIDSE----ERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~--~l~~l~h~niv~l~g~~~~~~----~~~l  537 (570)
                      +++.+.+.||+|+||.||+|+.+ |+.||||+++..   ..+.+.+|.+  .+.+++||||++++|+|...+    .+++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            35778899999999999999975 899999998532   2344444544  445789999999999998754    5789


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      |||||++|+|.++|++.     .+++.+.++
T Consensus        79 v~Ey~~~g~L~~~l~~~-----~l~~~~~~~  104 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY-----TVTVEGMIK  104 (303)
T ss_dssp             EEECCTTCBHHHHHHHC-----CBCHHHHHH
T ss_pred             EEecccCCCHHHHHhcC-----CCCHHHHHH
Confidence            99999999999999863     255555443

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=7.2e-13  Score=129.81  Aligned_cols=92  Identities=20%  Similarity=0.166  Sum_probs=80.9

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|.+.+.||+|+||.||+|. ..+|+.||+|+++..   .....+.+.+|+.+|.+++||||+++++++...+..++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            468889999999999999999 467899999999632   2234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCC
Q 008332          540 EYMPNKSLDCYLFGLS  555 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~  555 (570)
                      |||++|+|.+++.+.+
T Consensus        85 ey~~gg~L~~~~~~~~  100 (337)
T d1o6la_          85 EYANGGELFFHLSRER  100 (337)
T ss_dssp             ECCTTCBHHHHHHHHS
T ss_pred             eccCCCchhhhhhccc
Confidence            9999999999998643

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=9.6e-13  Score=128.16  Aligned_cols=91  Identities=21%  Similarity=0.309  Sum_probs=77.1

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHH-ccCCCCccceeEEEEeCCeeEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTA-KLQHVNLIRVLGFCIDSEERMLI  538 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~-~l~h~niv~l~g~~~~~~~~~lv  538 (570)
                      ++|.+.+.||+|+||+||+|.. .+++.||||+++..   .....+.+..|..++. .++|||||++++++..++..+||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            4688899999999999999994 56899999999532   2234456777777765 68999999999999999999999


Q ss_pred             EecCCCCCHHHHHhcC
Q 008332          539 YEYMPNKSLDCYLFGL  554 (570)
Q Consensus       539 ~e~~~~GsL~~~L~~~  554 (570)
                      ||||++|+|.++|+..
T Consensus        82 mEy~~~g~L~~~i~~~   97 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSC   97 (320)
T ss_dssp             EECCTTCBHHHHHHHH
T ss_pred             EeecCCCcHHHHhhcc
Confidence            9999999999999854

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.34  E-value=1e-12  Score=127.70  Aligned_cols=93  Identities=25%  Similarity=0.343  Sum_probs=81.0

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||+|+. .+|+.||||+++..   .....+.+.+|+.+|.+++|||||++++++...+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4588899999999999999994 56899999998532   2234577999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcCCC
Q 008332          540 EYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       540 e~~~~GsL~~~L~~~~~  556 (570)
                      |||++|+|..++.....
T Consensus        84 E~~~gg~l~~~~~~~~~  100 (316)
T d1fota_          84 DYIEGGELFSLLRKSQR  100 (316)
T ss_dssp             CCCCSCBHHHHHHHTSS
T ss_pred             eecCCcccccccccccc
Confidence            99999999999886543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.7e-12  Score=125.40  Aligned_cols=95  Identities=25%  Similarity=0.420  Sum_probs=75.6

Q ss_pred             HHhcCcccceeeeccCCccEEEEEecC--------CcEEEEEEecCCC-cccHHHHHHHHHHHHcc-CCCCccceeEEEE
Q 008332          461 AATERFSIRNKLGEGGYGPVYKGVLPC--------GEVIAVKKLSKTS-TQGFEEFKNEVMLTAKL-QHVNLIRVLGFCI  530 (570)
Q Consensus       461 ~~~~~~~~~~~lg~G~fg~V~~~~~~~--------~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~  530 (570)
                      ...++|.+.+.||+|+||.||+|+...        +..||||+++... .....++.+|...+.++ +|||||+++++|.
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~   89 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   89 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence            445678899999999999999998422        2479999996433 34457899999999888 8999999999999


Q ss_pred             eCCeeEEEEecCCCCCHHHHHhcCC
Q 008332          531 DSEERMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       531 ~~~~~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .+...++|||||++|+|.++|+..+
T Consensus        90 ~~~~~~~v~e~~~~g~l~~~i~~~~  114 (299)
T d1fgka_          90 QDGPLYVIVEYASKGNLREYLQARR  114 (299)
T ss_dssp             SSSSCEEEECCCTTCBHHHHHHTTS
T ss_pred             cCCeEEEEEEccCCCcHHHHHHhhc
Confidence            9999999999999999999998664

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.4e-12  Score=124.14  Aligned_cols=101  Identities=29%  Similarity=0.393  Sum_probs=73.5

Q ss_pred             cCcccceeeeccCCccEEEEEecC--C--cEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPC--G--EVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~--~--~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ++|++.+.||+|+||.||+|....  +  ..||||++...   .....+.|.+|+.+|.+++||||++++|+|.. +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            568889999999999999998532  2  36899998642   22335689999999999999999999999965 5678


Q ss_pred             EEEecCCCCCHHHHHhcCCCCcccccHhhhhc
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCS  568 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~~  568 (570)
                      +||||+++|+|.+++....   ..+++.++++
T Consensus        87 lv~e~~~~~~l~~~~~~~~---~~l~~~~~~~  115 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQ---GHFLLGTLSR  115 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHG---GGSCHHHHHH
T ss_pred             eeeeeecCcchhhhhhccc---CCCCHHHHHH
Confidence            9999999999999988532   3355555443

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=3.7e-12  Score=124.01  Aligned_cols=100  Identities=31%  Similarity=0.509  Sum_probs=77.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCc----EEEEEEecC-CCcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~----~vavK~l~~-~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  537 (570)
                      .+|++.++||+|+||.||+|.. .+|+    .||+|.++. ......++|.+|+.+|.+++|||||+++|+|.. +..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeE
Confidence            3588889999999999999985 3343    689999864 334556789999999999999999999999975 45678


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ++||+.+|+|.+++.....   .+++.+++
T Consensus        88 v~e~~~~~~l~~~~~~~~~---~~~~~~~~  114 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKD---NIGSQYLL  114 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSS---SCCHHHHH
T ss_pred             EEEeccCCccccccccccc---CCCHHHHH
Confidence            8899999999999886533   34444443

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=5e-12  Score=121.96  Aligned_cols=101  Identities=28%  Similarity=0.404  Sum_probs=78.8

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|++.+.||+|+||.||+|. ..+++.||||+++...  ....+.+.+|+.+|++++|||||++++++..+...++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            478889999999999999999 4678999999996332  2234679999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          541 YMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       541 ~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      |+.+ ++.+++....  ...+++.++.
T Consensus        82 ~~~~-~~~~~~~~~~--~~~l~e~~~~  105 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASA--LTGIPLPLIK  105 (298)
T ss_dssp             CCSE-EHHHHHHHTT--TTCCCHHHHH
T ss_pred             ecCC-chhhhhhhhc--ccCCCHHHHH
Confidence            9975 5666665432  2234544443

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=3.1e-12  Score=123.59  Aligned_cols=102  Identities=23%  Similarity=0.402  Sum_probs=81.2

Q ss_pred             ChHHHHHHhcCcccceeeeccCCccEEEEEec------CCcEEEEEEecCC-CcccHHHHHHHHHHHHcc-CCCCcccee
Q 008332          455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLP------CGEVIAVKKLSKT-STQGFEEFKNEVMLTAKL-QHVNLIRVL  526 (570)
Q Consensus       455 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~h~niv~l~  526 (570)
                      +..+++...++|++.+.||+|+||.||+|...      +++.||||+++.. .....+.+.+|...+.++ +|+||+.+.
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~   83 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   83 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence            44566667788999999999999999999842      2468999999643 334456788898888887 789999999


Q ss_pred             EEEEeCC-eeEEEEecCCCCCHHHHHhcCCC
Q 008332          527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSH  556 (570)
Q Consensus       527 g~~~~~~-~~~lv~e~~~~GsL~~~L~~~~~  556 (570)
                      +.+...+ ..++|||||++|+|.++|+..+.
T Consensus        84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~  114 (299)
T d1ywna1          84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRN  114 (299)
T ss_dssp             EEECSTTSCCEEEEECCTTCBHHHHHHHTGG
T ss_pred             eeeccCCCeEEEEEEecCCCcHHHHHHhccc
Confidence            9987654 68999999999999999986543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.25  E-value=5.1e-12  Score=125.19  Aligned_cols=91  Identities=24%  Similarity=0.285  Sum_probs=74.7

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHH---HHHHHccCCCCccceeEEEEeCCeeE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS---TQGFEEFKNE---VMLTAKLQHVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~---~~~~~~f~~e---~~~l~~l~h~niv~l~g~~~~~~~~~  536 (570)
                      ++|.+.++||+|+||.||+|.. .+|+.||||++....   ......+.+|   +.++..++|||||++++++...+..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            4688899999999999999994 568999999985321   1222334444   66777889999999999999999999


Q ss_pred             EEEecCCCCCHHHHHhcC
Q 008332          537 LIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~  554 (570)
                      +|||||++|+|.++|...
T Consensus        84 ivmE~~~gg~L~~~l~~~  101 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQH  101 (364)
T ss_dssp             EEECCCCSCBHHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHhc
Confidence            999999999999999854

>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase-like lectin ym1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=2.4e-12  Score=93.40  Aligned_cols=65  Identities=29%  Similarity=0.633  Sum_probs=58.0

Q ss_pred             cccceeccCCCCCCCCCCCCC-----CCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEec
Q 008332          263 YGYAWTLVKPEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF  330 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~~~g-----~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y  330 (570)
                      |||+|+|.+++++++|+++.|     +.+.++|.++|.|||+.+++ +  ++..||+.+..||..++++||+|
T Consensus         1 YGRs~tL~~~~~~~~gap~~g~g~~G~~t~~~G~l~y~EIc~~~~~-~--~~~~~D~~~~~~y~~~~~qWisY   70 (70)
T d1vf8a2           1 YGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNE-G--ATEVWDAPQEVPYAYQGNEWVGY   70 (70)
T ss_dssp             EEEEEEESCTTCCSTTCBEEEECCCCTTTCCTTEEEHHHHHHHHHT-T--CEEEEETTTTEEEEEETTEEEEC
T ss_pred             CCCceECCCCccCCCCCccccCCCCCCccCCCCeEeHHHHHHHHhC-C--CeEEEeCCCCccEEEECCEEEeC
Confidence            899999999999999988654     45788999999999998874 3  78899999999999999999998

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.24  E-value=5.8e-12  Score=120.79  Aligned_cols=90  Identities=23%  Similarity=0.349  Sum_probs=77.5

Q ss_pred             cCcccceeeeccCCccEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      ++|++.+.||+|+||.||+|+.++|+.||||+++...  ....+.+.+|+.+|.+++||||+++++.+...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4688899999999999999998889999999996432  23356899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhc
Q 008332          542 MPNKSLDCYLFG  553 (570)
Q Consensus       542 ~~~GsL~~~L~~  553 (570)
                      +.++.+..+...
T Consensus        82 ~~~~~~~~~~~~   93 (286)
T d1ob3a_          82 LDQDLKKLLDVC   93 (286)
T ss_dssp             CSEEHHHHHHTS
T ss_pred             ehhhhHHHHHhh
Confidence            987766666543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=6.8e-12  Score=123.53  Aligned_cols=91  Identities=21%  Similarity=0.256  Sum_probs=79.9

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||+|.. .+|+.||||++...   .....+.+++|+.+|..++||||+++++++......++|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4688899999999999999994 56899999998532   2234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHHHhcC
Q 008332          540 EYMPNKSLDCYLFGL  554 (570)
Q Consensus       540 e~~~~GsL~~~L~~~  554 (570)
                      ||+.+|+|.++|.+.
T Consensus       121 e~~~~g~l~~~l~~~  135 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRI  135 (350)
T ss_dssp             ECCTTCBHHHHHHHH
T ss_pred             ccccccchhhhHhhc
Confidence            999999999999754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=8.8e-12  Score=122.02  Aligned_cols=97  Identities=18%  Similarity=0.227  Sum_probs=76.4

Q ss_pred             cCcccc-eeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHcc-CCCCccceeEEEEe----CCeeE
Q 008332          464 ERFSIR-NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCID----SEERM  536 (570)
Q Consensus       464 ~~~~~~-~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~h~niv~l~g~~~~----~~~~~  536 (570)
                      ++|.+. ++||+|+||.||+|. ..+++.||||+++..     ..+.+|+.++.++ +|||||++++++..    ....+
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            457765 579999999999999 467899999998532     4577899987665 89999999999865    35689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCcccccHhhhh
Q 008332          537 LIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC  567 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~~~~~~~~~~~~~~~~  567 (570)
                      ||||||++|+|.++|.++.  ...+++.++.
T Consensus        86 ivmEy~~gg~L~~~i~~~~--~~~l~e~~~~  114 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRG--DQAFTEREAS  114 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCS--CCCEEHHHHH
T ss_pred             EEEECCCCCcHHHHHHhcC--CCCcCHHHHH
Confidence            9999999999999998632  2345555443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.2e-11  Score=119.42  Aligned_cols=84  Identities=23%  Similarity=0.293  Sum_probs=68.5

Q ss_pred             ceeeeccCCccEEEEEe-cCCcEEEEEEecCCCccc-----HHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEecC
Q 008332          469 RNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQG-----FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYM  542 (570)
Q Consensus       469 ~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~-----~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  542 (570)
                      .++||+|+||.||+|.. .+|+.||||+++......     .+.+.+|+.+|.+++|||||++++++...+..+|||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            47899999999999994 568999999986332211     246889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHh
Q 008332          543 PNKSLDCYLF  552 (570)
Q Consensus       543 ~~GsL~~~L~  552 (570)
                      ++|++..++.
T Consensus        83 ~~~~~~~~~~   92 (299)
T d1ua2a_          83 ETDLEVIIKD   92 (299)
T ss_dssp             SEEHHHHHTT
T ss_pred             cchHHhhhhh
Confidence            9877665554

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=2.9e-11  Score=116.17  Aligned_cols=91  Identities=21%  Similarity=0.355  Sum_probs=79.6

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCCeeEEEEe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYE  540 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  540 (570)
                      ++|++.+.||+|+||.||+|+ ..+++.||||+++...  ......+.+|+.+|+.++||||+++.+.+......++++|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            468889999999999999999 4678899999986332  2345789999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHhcC
Q 008332          541 YMPNKSLDCYLFGL  554 (570)
Q Consensus       541 ~~~~GsL~~~L~~~  554 (570)
                      ++.+++|..++...
T Consensus        82 ~~~~~~l~~~~~~~   95 (292)
T d1unla_          82 FCDQDLKKYFDSCN   95 (292)
T ss_dssp             CCSEEHHHHHHHTT
T ss_pred             eccccccccccccc
Confidence            99999998888754

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=4e-11  Score=118.33  Aligned_cols=92  Identities=23%  Similarity=0.309  Sum_probs=75.5

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeCC-----e
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-----E  534 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~-----~  534 (570)
                      .++|++.+.||+|+||.||+|. ..+|+.||||+++...  ....+.+.+|+.+|.+++|||+|++++++....     .
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            4578999999999999999999 4679999999996432  233457899999999999999999999986432     3


Q ss_pred             eEEEEecCCCCCHHHHHhcC
Q 008332          535 RMLIYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~  554 (570)
                      .+++++|+.+|+|.+++..+
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~  116 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ  116 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC
T ss_pred             eEEEEEeecCCchhhhcccc
Confidence            46677788899999999653

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=6.1e-11  Score=116.70  Aligned_cols=91  Identities=19%  Similarity=0.224  Sum_probs=71.3

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCC-cccHHHHHHHHHHHHccCCCCccceeEEEEeCC----eeEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE----ERML  537 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~----~~~l  537 (570)
                      .+|.+.+.||+|+||+||+|. ..+|+.||||+++... ....+.+++|+.+|.+++||||+++++++....    ..++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            468889999999999999998 4679999999996433 334567999999999999999999999987653    2344


Q ss_pred             EEecCCCCCHHHHHhcC
Q 008332          538 IYEYMPNKSLDCYLFGL  554 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~  554 (570)
                      +++++.+|+|.+++...
T Consensus        88 l~~~~~~g~L~~~l~~~  104 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQ  104 (345)
T ss_dssp             EEEECCCEEHHHHHHHC
T ss_pred             EEEeecCCchhhhhhcC
Confidence            55667799999999753

>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.6e-11  Score=88.52  Aligned_cols=63  Identities=25%  Similarity=0.496  Sum_probs=55.2

Q ss_pred             cccceeccCCCCCCCCCCCCCC-----CCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEec
Q 008332          263 YGYAWTLVKPEDNGIGAAAAGP-----ALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF  330 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~~~g~-----~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y  330 (570)
                      |||+|+|.+++++++|+++.||     .+.++|.++|.|||+..     .++..||+.+..||+.++++||+|
T Consensus         1 YGrs~tL~~~~~~~~gap~~Gpg~~G~~T~~~G~l~y~EIc~~~-----~~~~~~d~~~~~py~~~~~qWisY   68 (68)
T d1wb0a2           1 YGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWK-----GATKQRIQDQKVPYIFRDNQWVGF   68 (68)
T ss_dssp             EEEEEEESCTTCCSTTCBEEEECCCCTTTCCTTEEEHHHHTTCT-----TCEEEEETTTTEEEEEETTEEEEC
T ss_pred             CCcceEcCCCCCCCCCCccccCCCCCCccCCCeeEEhHHhhhhc-----CCcEEEeccccccEEEECCEEEeC
Confidence            8999999999999999886554     46789999999999652     377889999999999999999998

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.08  E-value=5.7e-11  Score=116.11  Aligned_cols=85  Identities=22%  Similarity=0.406  Sum_probs=73.3

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-CCCccceeEEEEeC--CeeEEEE
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDS--EERMLIY  539 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~  539 (570)
                      ++|++.+.||+|+||.||+|+. .+++.||||+++..   ..+.+.+|+.+|.+++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5689999999999999999994 66899999999643   3467899999999995 99999999998754  4689999


Q ss_pred             ecCCCCCHHHHH
Q 008332          540 EYMPNKSLDCYL  551 (570)
Q Consensus       540 e~~~~GsL~~~L  551 (570)
                      |||++|+|..+.
T Consensus       112 e~~~~~~L~~~~  123 (328)
T d3bqca1         112 EHVNNTDFKQLY  123 (328)
T ss_dssp             ECCCSCBGGGTT
T ss_pred             eecCCCcHHHHh
Confidence            999999998764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.8e-11  Score=114.95  Aligned_cols=91  Identities=24%  Similarity=0.393  Sum_probs=75.1

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCc---c---cHHHHHHHHHHHHccC--CCCccceeEEEEeCCe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST---Q---GFEEFKNEVMLTAKLQ--HVNLIRVLGFCIDSEE  534 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~---~---~~~~f~~e~~~l~~l~--h~niv~l~g~~~~~~~  534 (570)
                      ++|++.++||+|+||.||+|. ..+|+.||||++.....   .   ....+.+|+.+|.+++  |||||++++++..++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            468899999999999999999 46789999999853211   1   1234678999999986  9999999999999999


Q ss_pred             eEEEEecCCC-CCHHHHHhcC
Q 008332          535 RMLIYEYMPN-KSLDCYLFGL  554 (570)
Q Consensus       535 ~~lv~e~~~~-GsL~~~L~~~  554 (570)
                      .++||||+.+ +++.+++...
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~  104 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITER  104 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH
T ss_pred             EEEEEEeccCcchHHHHHhcc
Confidence            9999999976 6888888753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=8.4e-11  Score=115.80  Aligned_cols=90  Identities=24%  Similarity=0.337  Sum_probs=68.8

Q ss_pred             hcCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeCC------
Q 008332          463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------  533 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------  533 (570)
                      .++|++.+.||+|+||.||+|. ..+|+.||||+++..  .....+.+.+|+.+|.+++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            4578889999999999999999 456999999999643  2233567899999999999999999999997654      


Q ss_pred             eeEEEEecCCCCCHHHHHhc
Q 008332          534 ERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       534 ~~~lv~e~~~~GsL~~~L~~  553 (570)
                      ..++||||+ +++|..+++.
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~  115 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH  115 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH
T ss_pred             eEEEEEecc-cccHHHHHHh
Confidence            469999999 5578877764

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.6e-11  Score=115.54  Aligned_cols=92  Identities=23%  Similarity=0.292  Sum_probs=77.9

Q ss_pred             cCcccceeeeccCCccEEEEEe----cCCcEEEEEEecCCC----cccHHHHHHHHHHHHccCC-CCccceeEEEEeCCe
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKLSKTS----TQGFEEFKNEVMLTAKLQH-VNLIRVLGFCIDSEE  534 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~l~~~~----~~~~~~f~~e~~~l~~l~h-~niv~l~g~~~~~~~  534 (570)
                      ++|++.+.||+|+||.||+|..    .+|+.||||.++...    ....+.+.+|+.+|.+++| |||+++.+.+.....
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688999999999999999983    247899999985321    1234568899999999966 899999999999999


Q ss_pred             eEEEEecCCCCCHHHHHhcCC
Q 008332          535 RMLIYEYMPNKSLDCYLFGLS  555 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~~~~  555 (570)
                      .++++||+.+|+|.+++...+
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~  124 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRE  124 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS
T ss_pred             eeeeeecccccHHHHHHHhcc
Confidence            999999999999999998644

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1.2e-10  Score=114.91  Aligned_cols=97  Identities=25%  Similarity=0.396  Sum_probs=71.2

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEEEEeCC------eeEE
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE------ERML  537 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~~------~~~l  537 (570)
                      +|+..++||+|+||+||+|.. .+|+.||||++.....    ...+|+.+|.+++||||+++++++....      .++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            467778999999999999995 5689999999964322    2347999999999999999999986532      4789


Q ss_pred             EEecCCCCCHHHHHhcCCCCcccccHhhh
Q 008332          538 IYEYMPNKSLDCYLFGLSHQKTYFGLEKT  566 (570)
Q Consensus       538 v~e~~~~GsL~~~L~~~~~~~~~~~~~~~  566 (570)
                      |||||++| +.+.+.........+++.++
T Consensus        97 v~Ey~~~~-~~~~l~~~~~~~~~l~~~~~  124 (350)
T d1q5ka_          97 VLDYVPET-VYRVARHYSRAKQTLPVIYV  124 (350)
T ss_dssp             EEECCSEE-HHHHHHHHHHTTCCCCHHHH
T ss_pred             EEeccCCc-cHHHHHhhhhccCCCCHHHH
Confidence            99999865 44444322223334555443

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.4e-10  Score=114.46  Aligned_cols=88  Identities=23%  Similarity=0.291  Sum_probs=70.4

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHHccCCCCccceeEEEEeC------Ce
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS------EE  534 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~------~~  534 (570)
                      ++|++.+.||+|+||.||+|.. .+|+.||||+++...  ......+.+|+.++.+++||||+++++++...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5688899999999999999994 569999999996432  33345789999999999999999999998643      57


Q ss_pred             eEEEEecCCCCCHHHHHh
Q 008332          535 RMLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       535 ~~lv~e~~~~GsL~~~L~  552 (570)
                      .++|||||.+ +|.+.+.
T Consensus        97 ~~iv~Ey~~~-~l~~~~~  113 (355)
T d2b1pa1          97 VYLVMELMDA-NLCQVIQ  113 (355)
T ss_dssp             EEEEEECCSE-EHHHHHT
T ss_pred             eEEEEeccch-HHHHhhh
Confidence            8999999976 5555554

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.1e-10  Score=111.42  Aligned_cols=90  Identities=18%  Similarity=0.326  Sum_probs=71.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHHccCCCCccceeEEEEeC-------
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKT--STQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS-------  532 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~h~niv~l~g~~~~~-------  532 (570)
                      .++|++.+.||+|+||+||+|.. .+|+.||||++...  .......+.+|+.+|.+++|||++++.+++...       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36788999999999999999994 57899999998532  233456789999999999999999999998653       


Q ss_pred             -CeeEEEEecCCCCCHHHHHh
Q 008332          533 -EERMLIYEYMPNKSLDCYLF  552 (570)
Q Consensus       533 -~~~~lv~e~~~~GsL~~~L~  552 (570)
                       ...++||||+.++.+..+..
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~  109 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSN  109 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTC
T ss_pred             CceEEEEEeccCCCccchhhh
Confidence             35789999998876665443

>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Signal processing protein (SPC-40, MGP-40)
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.99  E-value=2.3e-10  Score=82.16  Aligned_cols=63  Identities=21%  Similarity=0.489  Sum_probs=53.5

Q ss_pred             cccceeccCCCCCCCCCCCC-----CCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEec
Q 008332          263 YGYAWTLVKPEDNGIGAAAA-----GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF  330 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~~~-----g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y  330 (570)
                      |||+|+|.++ ++++|++..     |+.+.++|.++|.|||+.++.    +...||....+||..++++||+|
T Consensus         1 YGRsftL~~~-~~~~g~p~~Gpg~~G~~T~~~G~lay~EIc~~~~~----~~~~~d~~~~~pyay~g~qWi~Y   68 (68)
T d2pi6a2           1 FGRSFTLASS-KTDVGAPVSGPGIPGRFTKEKGILAYYEICDFLHG----ATTHRFRDQQVPYATKGNQWVAY   68 (68)
T ss_dssp             EEEEEEESSS-CCSTTCBEEEECCCCTTTCCTTEEEHHHHHHHTTT----CEEEEETTTTEEEEEETTEEEEC
T ss_pred             CCCceEcCCC-CCCCCCccccCCCCCCccCCCceEEHHHHHHHHhC----CcEEEecCccccEEEECCEEEcC
Confidence            8999999986 578888754     456789999999999998754    45678888899999999999998

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.91  E-value=1.7e-09  Score=103.47  Aligned_cols=90  Identities=19%  Similarity=0.325  Sum_probs=74.8

Q ss_pred             cCcccceeeeccCCccEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHHccCC-CCccceeEEEEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH-VNLIRVLGFCIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~-~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e~  541 (570)
                      .+|++.+.||+|+||.||+|. ..+|+.||||.+.....  ...+.+|++.+..++| +|++.+.+++......++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            468899999999999999999 45688999998854322  2346788899999865 8999999999999999999999


Q ss_pred             CCCCCHHHHHhcCCC
Q 008332          542 MPNKSLDCYLFGLSH  556 (570)
Q Consensus       542 ~~~GsL~~~L~~~~~  556 (570)
                      + +|+|.++++....
T Consensus        83 ~-~~~l~~~~~~~~~   96 (293)
T d1csna_          83 L-GPSLEDLLDLCGR   96 (293)
T ss_dssp             C-CCBHHHHHHHTTT
T ss_pred             c-CCCHHHHHHhhcc
Confidence            9 6899999986443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=9.8e-10  Score=105.95  Aligned_cols=91  Identities=22%  Similarity=0.343  Sum_probs=68.6

Q ss_pred             hcCcccceeeeccCCccEEEEEe-cC-CcEEEEEEecCC--CcccHHHHHHHHHHHHcc---CCCCccceeEEEEeC---
Q 008332          463 TERFSIRNKLGEGGYGPVYKGVL-PC-GEVIAVKKLSKT--STQGFEEFKNEVMLTAKL---QHVNLIRVLGFCIDS---  532 (570)
Q Consensus       463 ~~~~~~~~~lg~G~fg~V~~~~~-~~-~~~vavK~l~~~--~~~~~~~f~~e~~~l~~l---~h~niv~l~g~~~~~---  532 (570)
                      .++|++.+.||+|+||.||+|.. .+ ++.||||+++..  .......+.+|+.+|+.+   +||||+++++++...   
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46789999999999999999984 34 567999998532  222223466777777665   899999999998642   


Q ss_pred             --CeeEEEEecCCCCCHHHHHhc
Q 008332          533 --EERMLIYEYMPNKSLDCYLFG  553 (570)
Q Consensus       533 --~~~~lv~e~~~~GsL~~~L~~  553 (570)
                        ...++++||+++|++......
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~  108 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKV  108 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHS
T ss_pred             cCceEEEEEEeccCCchhhhhhc
Confidence              367899999998776655543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.81  E-value=6.4e-09  Score=99.75  Aligned_cols=88  Identities=19%  Similarity=0.335  Sum_probs=68.5

Q ss_pred             cCcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccCCCCccceeEE-EEeCCeeEEEEec
Q 008332          464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGF-CIDSEERMLIYEY  541 (570)
Q Consensus       464 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~h~niv~l~g~-~~~~~~~~lv~e~  541 (570)
                      ++|++.+.||+|+||.||+|.. .+|+.||||.+......  .++.+|+.++..++|+|++..+.. ....+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS--CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC--HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            4688999999999999999984 56889999988643222  357889999999987776665555 4566788999999


Q ss_pred             CCCCCHHHHHhcC
Q 008332          542 MPNKSLDCYLFGL  554 (570)
Q Consensus       542 ~~~GsL~~~L~~~  554 (570)
                      + +|+|.+.+...
T Consensus        85 ~-~~~l~~~~~~~   96 (299)
T d1ckia_          85 L-GPSLEDLFNFC   96 (299)
T ss_dssp             C-CCBHHHHHHHT
T ss_pred             c-CCchhhhhhhc
Confidence            9 45777776643

>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase A1
species: Bacillus circulans [TaxId: 1397]

Probab=98.70  E-value=5.1e-09  Score=76.20  Aligned_cols=67  Identities=16%  Similarity=0.371  Sum_probs=56.0

Q ss_pred             cccceeccCCCCCCCCCCCCCC---CCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeec--CCEEEec
Q 008332          263 YGYAWTLVKPEDNGIGAAAAGP---ALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFST--GTVWFGF  330 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~~~g~---~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~--~~~~i~y  330 (570)
                      |||.|+++++..++.++++.++   ++.++|+++|+|||+.+... ..+++.||+.+..||...  .++||+|
T Consensus         1 YGR~w~~v~~~~~g~~~~~~g~~~~G~~e~G~~~Y~ei~~~~~~~-~g~~~~~D~~a~apY~y~~~~~~~isY   72 (72)
T d1itxa2           1 YGRGWDGCAQAGNGQYQTCTGGSSVGTWEAGSFDFYDLEANYINK-NGYTRYWNDTAKVPYLYNASNKRFISY   72 (72)
T ss_dssp             EEEEEESCCSGGGGTTCBCSEECSCCSSSTTEEEHHHHHHHTTTC-TTEEEEEETTTTEEEEEETTTCCEEEC
T ss_pred             CCCceeCCCCCCCCCCCcccCCCCCCccccccChHHHHHHHhccC-CCCEEEEcCCCccceEEeCCCCeEEeC
Confidence            8999999999988888877653   45688999999999987543 249999999999999865  5699998

>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase A
species: Serratia marcescens [TaxId: 615]

Probab=98.68  E-value=8.2e-09  Score=75.38  Aligned_cols=67  Identities=27%  Similarity=0.423  Sum_probs=54.3

Q ss_pred             cccceeccCCCCCCCCCC----CCCCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeec--CCEEEecc
Q 008332          263 YGYAWTLVKPEDNGIGAA----AAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFST--GTVWFGFD  331 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~----~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~--~~~~i~yd  331 (570)
                      |||.|+++++..++.+..    ..++++.++|+++|++||..+...+  ++..||+.+..||..+  .++||+||
T Consensus         1 YGRgw~~v~~~~~g~~~~~~~~~~~~gt~e~G~~~Y~~l~~~~~~~g--~~~~wD~~a~apY~Y~~~~~~~isYD   73 (73)
T d1edqa3           1 YGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIAGQFMSGE--WQYTYDATAEAPYVFKPSTGDLITFD   73 (73)
T ss_dssp             EEEEEESCBSCSTTCGGGSBCSEECCCSSBTTEEEHHHHHHHSSSTT--CEEEEETTTTEEEEEETTTTEEEECC
T ss_pred             CCCcccCCCCCCCCccccccCCCCcCcccccchhHHHHHHHHhccCC--eeEEEeccccccEEEeCCCCeEEeCC
Confidence            899999988766654432    2346788999999999999887654  9999999999999864  66899998

>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Psychrophilic chitinase B
species: Arthrobacter sp., tad20 [TaxId: 1667]

Probab=98.65  E-value=9.9e-09  Score=71.38  Aligned_cols=59  Identities=25%  Similarity=0.463  Sum_probs=48.6

Q ss_pred             cccceeccCCCCCCCCCCCC--CCCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEeecCCEEEec
Q 008332          263 YGYAWTLVKPEDNGIGAAAA--GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF  330 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~~~--g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y  330 (570)
                      |||.|+.++.  ++.+.++.  ++++.++|+++|++||+     +  +++.||+.++.||..++.+||+|
T Consensus         1 YGRgwt~v~~--~g~~~~a~g~~~gt~e~G~~~Y~~l~~-----~--~~~~~D~~a~a~Y~y~g~~wisY   61 (61)
T d1kfwa2           1 YGRGWTGAKN--VSPWGPATDGAPGTYETANEDYDKLKT-----L--GTDHYDAATGSAWRYDGTQWWSY   61 (61)
T ss_dssp             EEEEEESCCC--SSSSCBCSEECCCSSBTTEEEHHHHTT-----S--SEEEEETTTTEEEEECSSCEEEE
T ss_pred             CCcccccCcC--CCccccccCCCCCcccchhhhHHhhcC-----C--CEEEeeCCCcEeEEEeCCEEEeC
Confidence            8999998753  44554444  56688999999999983     3  78999999999999999999998

>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Imaginal disc growth factor-2
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.49  E-value=6.7e-08  Score=72.59  Aligned_cols=68  Identities=22%  Similarity=0.403  Sum_probs=48.6

Q ss_pred             cccceeccCCCCC---CCC-----CCCCCCCCCCCCcccHHHHHHHHhhCCCC--------eEEeecCceEE-EEee---
Q 008332          263 YGYAWTLVKPEDN---GIG-----AAAAGPALYDSGLVTYKKIKNHIKTYGPD--------VQVMYNSTYEV-NYFS---  322 (570)
Q Consensus       263 yG~~~~~~~~~~~---~~g-----~~~~g~~~~~~g~~~y~~i~~~~~~~~~~--------~~~~~d~~~~~-~y~~---  322 (570)
                      |||+|+|.++++.   .++     ....|+.+.++|+++|.|||.++.+.+..        ....+|..... ||+.   
T Consensus         1 YGRsftL~~~s~~~~~~~~~~~~g~g~~G~~t~~~G~lsy~EIC~~l~~~~~~~~~~~~a~lrrV~D~~~~~g~YAyr~~   80 (92)
T d1jnda2           1 YGNAWKLTKDSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPV   80 (92)
T ss_dssp             EEEEEECCGGGCSCCSSCBCSCCSBCCCCTTTCCTTEEEHHHHHHHBCCTTTTTCCGGGSCBEEECCTTCCSCEEEEECS
T ss_pred             CCCCeEcCCCCCCCCCCCCCcccCCCCCCcccCCcceEEHHHHHHHhccCCcceeecccCceeEecCcccceeeeEEecc
Confidence            8999999776543   234     34556778999999999999998875521        33455555443 7765   


Q ss_pred             ----cCCEEEec
Q 008332          323 ----TGTVWFGF  330 (570)
Q Consensus       323 ----~~~~~i~y  330 (570)
                          .+.+||+|
T Consensus        81 d~~~~~~qWVsY   92 (92)
T d1jnda2          81 DGQITEGIWVSY   92 (92)
T ss_dssp             BTTBCCCEEEEE
T ss_pred             cCCCcCCEeecC
Confidence                47899998

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.14  E-value=1.4e-06  Score=85.26  Aligned_cols=82  Identities=15%  Similarity=0.190  Sum_probs=61.9

Q ss_pred             CcccceeeeccCCccEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-----------CCCccceeEEEEeC
Q 008332          465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-----------HVNLIRVLGFCIDS  532 (570)
Q Consensus       465 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-----------h~niv~l~g~~~~~  532 (570)
                      +|++.++||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.++.+++           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            488999999999999999994 678999999996432 23456788888887764           57899999887653


Q ss_pred             --CeeEEEEecCCCCCH
Q 008332          533 --EERMLIYEYMPNKSL  547 (570)
Q Consensus       533 --~~~~lv~e~~~~GsL  547 (570)
                        ...+++++++..+..
T Consensus        93 ~~~~~~~~~~~~~~~~~  109 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGEN  109 (362)
T ss_dssp             ETTEEEEEEEECCCCEE
T ss_pred             cccceeeeeeecccccc
Confidence              455666666555443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.09  E-value=3.1e-06  Score=74.65  Aligned_cols=79  Identities=22%  Similarity=0.192  Sum_probs=58.9

Q ss_pred             ccceeeeccCCccEEEEEecCCcEEEEEEecCCCcc------------------cHHHHHHHHHHHHccCCCCccceeEE
Q 008332          467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ------------------GFEEFKNEVMLTAKLQHVNLIRVLGF  528 (570)
Q Consensus       467 ~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~------------------~~~~f~~e~~~l~~l~h~niv~l~g~  528 (570)
                      .+.+.||+|+||.||+|...+|+.||||.++.....                  ......+|...+.++.|++++..++.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            356899999999999999888999999987531100                  01235578888999999999987754


Q ss_pred             EEeCCeeEEEEecCCCCCHHH
Q 008332          529 CIDSEERMLIYEYMPNKSLDC  549 (570)
Q Consensus       529 ~~~~~~~~lv~e~~~~GsL~~  549 (570)
                      .    ..+++|||++++.+.+
T Consensus        83 ~----~~~lvme~~~~~~~~~   99 (191)
T d1zara2          83 E----GNAVLMELIDAKELYR   99 (191)
T ss_dssp             E----TTEEEEECCCCEEGGG
T ss_pred             c----CCEEEEEeeccccccc
Confidence            2    2379999998876544

>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase B
species: Serratia marcescens [TaxId: 615]

Probab=97.64  E-value=4.9e-05  Score=56.65  Aligned_cols=66  Identities=20%  Similarity=0.460  Sum_probs=50.6

Q ss_pred             cccceeccCCCCCCCCCCCCCCC-------------------CCCCCcccHHHHHHHHh-hCCCCeEEeecCceEEEEee
Q 008332          263 YGYAWTLVKPEDNGIGAAAAGPA-------------------LYDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYFS  322 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~~~g~~-------------------~~~~g~~~y~~i~~~~~-~~~~~~~~~~d~~~~~~y~~  322 (570)
                      |||.|+.+.+..++...++.++.                   ..+.|...|.+|...+. ..+  +++.||+.++.||..
T Consensus         1 YgRGW~gV~~~~nGl~q~~~~~~~g~~~~~~~~~~~~~~g~~~~e~G~~~y~~l~~~~~~~~G--y~~~~D~~AkApyly   78 (88)
T d1goia3           1 YGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLY   78 (88)
T ss_dssp             EEEEEESCCSSSTTTTCCCCCCCCSSCSSSCCCSTTCHHHHHHTCTTEEEHHHHHHHHHTTSS--EEEEEETTTTEEEEE
T ss_pred             CCCcccCCCCCCCCccccccCCCCCcccccCcccccccccccccccccccHHHHHHhhccCCC--cEEEeCcCcccceEE
Confidence            89999999887777655544432                   13568899999987543 344  999999999999985


Q ss_pred             c--CCEEEec
Q 008332          323 T--GTVWFGF  330 (570)
Q Consensus       323 ~--~~~~i~y  330 (570)
                      .  .++||||
T Consensus        79 n~~~g~fiSY   88 (88)
T d1goia3          79 HAQNGLFVTY   88 (88)
T ss_dssp             ETTTTEEEEC
T ss_pred             eCCCCeEeeC
Confidence            4  7789997

>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase 1
species: Aspergillus fumigatus [TaxId: 5085]

Probab=97.37  E-value=5.2e-05  Score=52.05  Aligned_cols=58  Identities=19%  Similarity=0.370  Sum_probs=43.8

Q ss_pred             cccceeccCCCCCCCCCCCCC--CCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEee--cCCEEEec
Q 008332          263 YGYAWTLVKPEDNGIGAAAAG--PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFS--TGTVWFGF  330 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~~~g--~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~--~~~~~i~y  330 (570)
                      |||.|+.+    ++++.+..|  ++++++|+.+|++|.    ..+  .++.||+.+..+|..  ..+.||||
T Consensus         1 YGRgf~gv----~g~~q~~~g~~~Gt~e~Gv~dYk~L~----~~G--~~~~~D~~a~aay~Yd~~~~~~isY   62 (62)
T d1w9pa2           1 YGRSFANT----DGPGKPYNGVGQGSWENGVWDYKALP----QAG--ATEHVLPDIMASYSYDATNKFLISY   62 (62)
T ss_dssp             EEEEESSC----SSTTSCCCCCCCCSSBTTEEEGGGCS----CTT--CEEEEEGGGTEEEEEETTTTEEEEC
T ss_pred             CCccccCC----CCCCCccccccCCCcccceEEHHHcC----cCC--ceEEEcCCceEEEEEeCCCCeEeeC
Confidence            89999765    455555544  457899999999874    233  889999998888874  45689987

>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: Chitinase insertion domain
family: Chitinase insertion domain
domain: Chitinase 1
species: Fungus (Coccidioides immitis) [TaxId: 5501]

Probab=97.34  E-value=7.5e-05  Score=51.11  Aligned_cols=58  Identities=22%  Similarity=0.413  Sum_probs=44.1

Q ss_pred             cccceeccCCCCCCCCCCCCC--CCCCCCCcccHHHHHHHHhhCCCCeEEeecCceEEEEee--cCCEEEec
Q 008332          263 YGYAWTLVKPEDNGIGAAAAG--PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFS--TGTVWFGF  330 (570)
Q Consensus       263 yG~~~~~~~~~~~~~g~~~~g--~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~--~~~~~i~y  330 (570)
                      |||.|+.+    ++++.+..|  ++++++|.++|++|.    ..  ..++.||+.+..+|..  ..+.||||
T Consensus         1 YGRgf~gv----~G~~q~~~G~~~Gt~e~Gv~dYk~L~----~~--g~~~~~D~~a~A~y~yd~~~~~fiSY   62 (62)
T d1ll7a2           1 YGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMP----QQ--GAQVTELEDIAASYSYDKNKRYLISY   62 (62)
T ss_dssp             EEEEECSC----SSTTSBCCCCCCBSSSTTEEEGGGCS----CT--TCEEEEETTTTEEEEEETTTTEEEEC
T ss_pred             CCcccCCC----CCCCCcCcCCCCCcccccEEEHHHCC----CC--CceEEEcCCceEEEEEeCCCCeEeeC
Confidence            89999765    456666554  457899999999873    23  3899999999888874  46689987

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.44  E-value=0.63  Score=41.09  Aligned_cols=94  Identities=14%  Similarity=0.034  Sum_probs=61.5

Q ss_pred             HHHHHhcCcccceeeeccCCccEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHHccC-CCCccceeEEEEeCCeeE
Q 008332          458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ-HVNLIRVLGFCIDSEERM  536 (570)
Q Consensus       458 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-h~niv~l~g~~~~~~~~~  536 (570)
                      ++......++..+..+-++...||+.... ++.+.+|+...........+.+|..++..+. +-.+.+++..+..++..+
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            44555555655554333445678987644 5667788875433323334677887777663 444667788877888899


Q ss_pred             EEEecCCCCCHHHHHh
Q 008332          537 LIYEYMPNKSLDCYLF  552 (570)
Q Consensus       537 lv~e~~~~GsL~~~L~  552 (570)
                      +||+++++..+.+...
T Consensus        87 lv~~~l~G~~~~~~~~  102 (263)
T d1j7la_          87 LLMSEADGVLCSEEYE  102 (263)
T ss_dssp             EEEECCSSEEHHHHTT
T ss_pred             EEEEeccccccccccc
Confidence            9999999988866543

>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Glycosyltrehalose trehalohydrolase, central domain
species: Deinococcus radiodurans [TaxId: 1299]

Probab=85.26  E-value=1.9  Score=40.88  Aligned_cols=89  Identities=15%  Similarity=0.131  Sum_probs=59.5

Q ss_pred             cHHHHHHHHHHHHhhCCCceEEEEEc-CCCCCCcccccc------------------cccChHHHHHHHHHHHHHHHHcC
Q 008332           72 DENQIAKFADTVKKKNPSITTILSIG-QGKDTNYSIYSS------------------MVRNSSHRKSFIDSSIRIARLYG  132 (570)
Q Consensus        72 ~~~~~~~~~~~lk~~~~~~kvllsig-g~~~~~~~~f~~------------------~~~~~~~r~~fi~siv~~~~~~~  132 (570)
                      ..+.+++++++++++  ++||++-+- +....+...|..                  =..+++-|+.+++.+.-|++++|
T Consensus        81 ~~~d~~~lv~~aH~~--gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~G  158 (420)
T d2bhua3          81 RPEDLMALVDAAHRL--GLGVFLDVVYNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYH  158 (420)
T ss_dssp             CHHHHHHHHHHHHHT--TCEEEEEECCSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHhc--cccccccccccccCCCCccccccccccccccccccccccccccChHHHHHHHHHhheeeeccc
Confidence            356789999988887  699998876 111111111111                  13578999999999999999999


Q ss_pred             CCceeeeccCCCCCCCccchhhhHHHHHHHHhh
Q 008332          133 FRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATK  165 (570)
Q Consensus       133 ~DGidiDwE~p~~~~~~~~~~~l~~~lr~~l~~  165 (570)
                      +||+-||--.--..+.   -..++++++.+++.
T Consensus       159 VDGfR~D~~~~l~~~~---~~~~~~~~~~~~~~  188 (420)
T d2bhua3         159 FDGLRLDATPYMTDDS---ETHILTELAQEIHE  188 (420)
T ss_dssp             CSEEEETTGGGCCCCS---SSCHHHHHHHHHHT
T ss_pred             ccEEEEeeeeeecccc---ccccHHHHHHHHHh
Confidence            9999999642111111   12467788877764