Citrus Sinensis ID: 008350

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------57
MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKRRMLDYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQRN
cccccccccccHHHHHHHHHHHccccHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccEEcccccHHHHHHHHccccccccccccccHHHHcccccccccccccccccccccccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccccccHHHHHHHcccccccccccccccccccccccccEEEccccccHHHHHHHHccccEEEEEEEEccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHccccccc
**DHFVGMGFSEEVVAKAIQENGEQNTDLILEA****************LIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYS*******************ELD***************************KLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALL***************************************PMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALE**********HVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA*********LEGKESSLFYDYFRILDLVKNM****
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MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKRRMLDYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQRN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DNA (cytosine-5)-methyltransferase DRM2 Involved in de novo DNA methylation. Controls asymmetric and CpNpG methylation. Required for FWA gene silencing but not for the maintenance of SUP gene silencing. Functionally redundant to CMT3 to maintain non-CpG methylation. Involved in RNA-directed DNA methylation.probableQ9M548

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.1.-.-Transferring one-carbon groups.probable
2.1.1.-15-hydroxyprostaglandin-I dehydrogenase (NADP(+)).probable
2.1.1.37DNA (cytosine-5-)-methyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QRV, chain A
Confidence level:very confident
Coverage over the Query: 439-565
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Template: 2PV0, chain B
Confidence level:very confident
Coverage over the Query: 374-468,490-566
View the alignment between query and template
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Template: 2QRV, chain A
Confidence level:very confident
Coverage over the Query: 249-338,376-431
View the alignment between query and template
View the model in PyMOL
Template: 4AE4, chain A
Confidence level:very confident
Coverage over the Query: 44-100,111-171
View the alignment between query and template
View the model in PyMOL
Template: 4AE4, chain A
Confidence level:very confident
Coverage over the Query: 1-87
View the alignment between query and template
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Template: 3SWR, chain A
Confidence level:confident
Coverage over the Query: 292-373,384-410,435-567
View the alignment between query and template
View the model in PyMOL