Citrus Sinensis ID: 008389

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------
MSMAKGIDDLPKNAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVLRAKAKEMGPVRKSKL
cccccccccccccccccccccHHHHHHHHHHHccccCEEEEccCEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHccccccHHcccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccccccccEEEEEccccccccccccccccccccHHHHHccccccccccccccccHHHHHccccccccccccEEEccHHHHHHHHHHHHHcccccccEEEEcccccccccccHHHHHHHHcccEEccccccHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccEEEEECcccccHHHHHHHHHcccEEEEEEccccccccccccccccccccccHHHHHHHHHcccccccccCEEEEEccccccccccccccccEEEEEHHHHccHcccccccccccccccccccccEEEEccccCEEEEcccccEEEcccccccHHHHHHHHHccccccEEEEEEcccccccccEEEEEEEccccccccccccHHHHHHHHHccccccccccEEEEccccccccccccHHHHHHHHHHccccccccc
*********LPKNAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVLRAKAKE*********
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MSMAKGIDDLPKNAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVLRAKAKEMGPVRKSKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Acetate/butyrate--CoA ligase AAE7, peroxisomal Peroxisomal acetate/butyrate--CoA ligase that is probably involved in the activation of exogenous acetate for entry into the glyoxylate cycle. May play a role to prevent carbon loss from peroxisomes during lipid mobilization. In vitro, is active with both acetate and butyrate.confidentQ8VZF1
Long-chain-fatty-acid--CoA ligase Catalyzes the esterification of a number of long chain fatty acids with CoA, resulting in the formation of long-chain fatty acyl-CoA. Myristate (C14) is the most efficiently processed fatty acid, followed by palmitate (C16). Also catalyzes the esterification of stearate (C18) and laurate (C12), but at lower efficiency. Does not catalyze the esterification of the unsaturated fatty acids mysteroleic and palmitoleic acids in vitro.probableQ5SKN9

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1RY2, chain A
Confidence level:very confident
Coverage over the Query: 21-557
View the alignment between query and template
View the model in PyMOL
Template: 3T5A, chain A
Confidence level:very confident
Coverage over the Query: 20-136,148-159,182-450
View the alignment between query and template
View the model in PyMOL