Citrus Sinensis ID: 008429

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-----
MSDLEAPLRPKRKKGIADFLVQFRWILVVFVVLPISVTIYFLIYLGDVKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPDFVEGMIYTSTEAVFMTGRYASKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWEGKLILPFGDQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHREVYPLWLCPHRLYKLPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIENGGFQPQYAVSELSEKNFWRMFDADLYEKCRKKYKAVGTFMSVYYKSKKGRKTEKEVQEAEQAQLEPAYAEVDQPID
cccccccccccHHHHHHHHHHHcccEEEEEEEcccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccccccEEcccccEEcccccccccccccEEEEcccccccEEECccccEEEEcccccHHHHHHHHccccccccccccccccEEcccccccccccccCCcccccccEEEEEEEEccccEEEEcccccccHHHHccccccccEEEEEEEEEEEEEcccEEEEEEEcccccHHHHHHHHHHHcccccccccccccccccEEcccccccEEEEEEcccccHHHHHccccEEEcccccccccccHHHHHHHccccccccccccHHHHHcccccHHHHHcccccccccHHHHHHHccccccHHHHHHcHHHHHHccccccccEEEEEEccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHccHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHHHHHHHcccccccccccc
*************KGIADFLVQFRWILVVFVVLPISVTIYFLIYLGDVKSDMKSY*K*****DENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPDFVEGMIYTSTEAVFMTGRYASKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWEGKLILPFGDQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHREVYPLWLCPHRLYKLPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIENGGFQPQYAVSELSEKNFWRMFDADLYEKCRKKYKAVGTFMSVYYKS******************************
xxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MSDLEAPLRPKRKKGIADFLVQFRWILVVFVVLPISVTIYFLIYLGDVKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPDFVEGMIYTSTEAVFMTGRYASKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWEGKLILPFGDQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHREVYPLWLCPHRLYKLPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIENGGFQPQYAVSELSEKNFWRMFDADLYEKCRKKYKAVGTFMSVYYKSKKGRKTEKEVQEAEQAQLEPAYAEVDQPID

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Delta(24)-sterol reductase Plays a critical role in the general process of plant cell elongation. Involved in the synthesis of campesterol, an early precursor of brassinolide. Required for the conversion of 24-methylenecholesterol to campesterol and for the conversion of isofucosterol to sitosterol. Necessary for both the isomerization and reduction of 24-methylenecholesterol. Regulate indirectly phytochrome-mediated light responses through the modulation of brassinosteroid biosynthesis.confidentQ39085
Delta(24)-sterol reductase Plays a critical role in the general process of plant cell elongation.probableP93472
Delta(24)-sterol reductase Catalyzes the reduction of the delta-24 double bond of sterol intermediates. Protects cells from oxidative stress by reducing caspase 3 activity during apoptosis induced by oxidative stress. Also protects against amyloid-beta peptide-induced apoptosis.probableQ15392

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2VFR, chain A
Confidence level:very confident
Coverage over the Query: 43-258,270-534
View the alignment between query and template
View the model in PyMOL
Template: 2EXR, chain A
Confidence level:very confident
Coverage over the Query: 59-299,318-322,335-524
View the alignment between query and template
View the model in PyMOL
Template: 2I0K, chain A
Confidence level:very confident
Coverage over the Query: 31-257,269-322,334-534
View the alignment between query and template
View the model in PyMOL