Citrus Sinensis ID: 008446

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-----

MGVRYSSLSLCSPTHQNHQSFRLATFTCDTKQKSNFSFYPTDKDRIFNTHYRRVSLFAITQFSICGLHSRIGNLKCGRVKEMETRQGIATKEALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELHRSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWSLDDSEIVSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT

cccccccEEEEcccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEccEEEccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccEEEEEHHHHccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHccEEcccccEEEccEEEEEEEEcccccccccccHHHHHHHHHHccccccccccHHHHHHcHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHcccccEEcccccccccccccHHHHHHHHHHcccccccHHHHHHccccccccccEEEEEcccccccccccccccEEEEEEcccEEEEEcccEEEEEEccccccccccccccccccccccc

cccccccccccccccccccccccccEcccccccccccccccccccccccccccccHcEccccccccHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccEEEccccccccccccccEEEEccEEccccEEcHHHHHHHHHcHHHHHHHHHHHHHcHHHHHHHHHcHHHHcHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEcccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccHcccccccHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHcHHHHHHHHHHHccccEEEEcHHHHHHHEEEcccccEEEccEEEEEEEEcccccHHHcccHHHHHHHHHHHHcccEEEccHHHHHcccHHHHHHcccccHHHHHccccHHHHHHHHHccccEEEccccHHHHHHHHccccEEEcccccccccccccHHHHHHHHHccccccHHHHHHHHHHHccccccccEEEEcccEccccEEEEEEEEEEEEEEccEEEEEEEEEEEEEEEEcccccccccccccEEEccEcc

mgvrysslslcspthqnhqsfrlatftcdtkqksnfsfyptdkdrifntHYRRVSLFAITQFSIcglhsrignlkcgrvkemeTRQGIATKEALNLQSVDQDLVQKMVYDALVWSSLHGlvvgdrsvqrsgkvpgvglvhapfallpvsfpeshfreaCELAPIFNELVDRVSLDGKFLQESlsrtkkvdpftsRLLDIHSKMLELNKkedirlglhrsdymlDEQTKSLLQIEVNTISSSFSGLSCLVSELHRSLLIHYGerlgldskkvpgnsAVIQFAEAMAKAWTEYNNARALVLVVVQSeehnmydqHWLSSVLKERHNVTTIRKTLAEIDaegellpdgtllvgGQVIAVVYFRagyaptdypsesEWRARLLMEQssavkcpsisyhlAGTKKIQQElakpnvlesrfldnkEDIAKVRKCFAGlwslddseivskaienpelyvmkpqregggnniygedVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLmrdgichkdhaiseLGIYGAYLRIKEKVIMNEQSGYLMrtkvassneggvaAGFAVLDSLYLT

mgvrysslslcspthqnhQSFRLATFTCDTKQKSNFsfyptdkdrifNTHYRRVSLFAITQFSICGLhsrignlkcgrVKEMETRQgiatkealnlqsVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFLQeslsrtkkvdpftsRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELHRSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAglwslddseiVSKAienpelyvmkpqregggnniygedVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVassneggvaagfavldslylt

MGVRYSSLSLCSPTHQNHQSFRLATFTCDTKQKSNFSFYPTDKDRIFNTHYRRVSLFAITQFSICGLHSRIGNLKCGRVKEMETRQGIATKEALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTIsssfsglsclvsELHRSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWSLDDSEIVSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT

*******************SFRLATFTCDTKQKSNFSFYPTDKDRIFNTHYRRVSLFAITQFSICGLHSRIGNLKCGRVKEMETRQGIATKEALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELHRSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAG***************************VRKCFAGLWSLDDSEIVSKAIENPELYVMK******GNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLY**

*********LCSPTHQNHQSFRLATFTCDTK*********************************************************************QDLVQKMVYDALVWSSLHGLVVG*************GLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKML****KEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELHRSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEIDAEGEL****TLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWSLDDSEIV*KAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT

******************QSFRLATFTCDTKQKSNFSFYPTDKDRIFNTHYRRVSLFAITQFSICGLHSRIGNLKCGRVKEMETRQGIATKEALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELHRSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWSLDDSEIVSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		565	2.2.26 [Sep-21-2011]
O22494		546	Glutathione synthetase, c	N/A	no	0.869	0.899	0.727	0.0
O23732		530	Glutathione synthetase, c	N/A	no	0.860	0.916	0.725	0.0
P46416		539	Glutathione synthetase, c	yes	no	0.858	0.899	0.720	0.0
P35668		474	Glutathione synthetase OS	N/A	no	0.807	0.962	0.405	5e-92
Q5EAC2		474	Glutathione synthetase OS	yes	no	0.759	0.905	0.433	8e-92
P48637		474	Glutathione synthetase OS	yes	no	0.739	0.881	0.435	8e-91
Q8HXX5		474	Glutathione synthetase OS	N/A	no	0.739	0.881	0.432	3e-90
P46413		474	Glutathione synthetase OS	yes	no	0.759	0.905	0.411	4e-86
Q54E83		476	Glutathione synthetase OS	yes	no	0.784	0.930	0.399	5e-86
P51855		474	Glutathione synthetase OS	yes	no	0.743	0.886	0.410	1e-85

>sp\|O22494\|GSHB_SOLLC Glutathione synthetase, chloroplastic OS=Solanum lycopersicum GN=GSH2 PE=2 SV=1	Back alignment and function desciption

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/492 (72%), Positives = 423/492 (85%), Gaps = 1/492 (0%)

Query: 74  LKCGRVKEMETRQGIATKEALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKV 133
           LKC +V EM+T+   + K  ++   +D  LVQK+  DALVW  L GL+VGDR+ +RSG +
Sbjct: 56  LKCAKVPEMQTQLEDSAKPIVDPHDIDSKLVQKLANDALVWCPLRGLLVGDRNSERSGTI 115

Query: 134 PGVGLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFT 193
           PGV +VHAP AL+P+SFPESH+++ACE+APIFNELVDRVS DG+FLQ+SLSRT+K DPFT
Sbjct: 116 PGVDMVHAPVALIPMSFPESHWKQACEVAPIFNELVDRVSQDGEFLQQSLSRTRKADPFT 175

Query: 194 SRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELH 253
           SRLL+IHSKMLE+NK E+IRLGLHRSDYMLDEQTK LLQIE+NTISSSF GLSCLVSELH
Sbjct: 176 SRLLEIHSKMLEINKLEEIRLGLHRSDYMLDEQTKLLLQIELNTISSSFPGLSCLVSELH 235

Query: 254 RSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQH 313
           RSLL  Y E +  D  ++P N+AV QFAEA+AKAW EY + RA+++ VVQ+EE NMYDQH
Sbjct: 236 RSLLQQYREDIASDPNRIPANNAVNQFAEALAKAWNEYGDPRAVIIFVVQAEERNMYDQH 295

Query: 314 WLSSVLKERHNVTTIRKTLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESE 373
           WLS+ L+ERH VTTIRKTLAEIDA GEL  DGTL+V GQ +AV+YFRAGYAP+DY SESE
Sbjct: 296 WLSASLRERHQVTTIRKTLAEIDALGELQQDGTLVVDGQAVAVIYFRAGYAPSDYHSESE 355

Query: 374 WRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLW 433
           W+ARLLMEQS AVKCPSISYHLAG+KKIQQELAKPNVLE RFL+NK+DIAK+RKCFAGLW
Sbjct: 356 WKARLLMEQSRAVKCPSISYHLAGSKKIQQELAKPNVLE-RFLENKDDIAKLRKCFAGLW 414

Query: 434 SLDDSEIVSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRI 493
           SLD+S+IV  AIE PELYVMKPQREGGGNNIYGEDV+  LL+L+K+GT  DAAYILMQRI
Sbjct: 415 SLDESDIVKDAIERPELYVMKPQREGGGNNIYGEDVRGALLKLQKEGTGSDAAYILMQRI 474

Query: 494 FPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVA 553
           FP +S + LMR+GI HK+  ISELGIYG YLR K +V++N+Q+GYLMRTKV+SS+EGGVA
Sbjct: 475 FPKISHSILMREGISHKEETISELGIYGTYLRNKTEVLINQQAGYLMRTKVSSSDEGGVA 534

Query: 554 AGFAVLDSLYLT 565
           AGFAVLDS+YL 
Sbjct: 535 AGFAVLDSIYLV 546

Solanum lycopersicum (taxid: 4081)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: 3

>sp\|O23732\|GSHB_BRAJU Glutathione synthetase, chloroplastic OS=Brassica juncea GN=GSH2 PE=2 SV=1	Back alignment and function description

>sp\|P46416\|GSHB_ARATH Glutathione synthetase, chloroplastic OS=Arabidopsis thaliana GN=GSH2 PE=2 SV=3	Back alignment and function description

>sp\|P35668\|GSHB_XENLA Glutathione synthetase OS=Xenopus laevis GN=gss PE=2 SV=1	Back alignment and function description

>sp\|Q5EAC2\|GSHB_BOVIN Glutathione synthetase OS=Bos taurus GN=GSS PE=2 SV=1	Back alignment and function description

>sp\|P48637\|GSHB_HUMAN Glutathione synthetase OS=Homo sapiens GN=GSS PE=1 SV=1	Back alignment and function description

>sp\|Q8HXX5\|GSHB_MACFA Glutathione synthetase OS=Macaca fascicularis GN=GSS PE=2 SV=1	Back alignment and function description

>sp\|P46413\|GSHB_RAT Glutathione synthetase OS=Rattus norvegicus GN=Gss PE=1 SV=1	Back alignment and function description

>sp\|Q54E83\|GSHB_DICDI Glutathione synthetase OS=Dictyostelium discoideum GN=gshB PE=3 SV=1	Back alignment and function description

>sp\|P51855\|GSHB_MOUSE Glutathione synthetase OS=Mus musculus GN=Gss PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		565
225451050		507	PREDICTED: glutathione synthetase, chlor	0.869	0.968	0.806	0.0
391881814		478	glutathione synthetase [Dimocarpus longa	0.846	1.0	0.842	0.0
298205043		477	unnamed protein product [Vitis vinifera]	0.810	0.960	0.811	0.0
255542534		492	glutathione synthetase, putative [Ricinu	0.853	0.979	0.765	0.0
449485736		549	PREDICTED: glutathione synthetase, chlor	0.943	0.970	0.703	0.0
449435701		547	PREDICTED: glutathione synthetase, chlor	0.943	0.974	0.701	0.0
50058090		472	glutathione synthetase [Zinnia elegans]	0.826	0.989	0.769	0.0
15277522		556	glutathione synthetase GSHS1 [Medicago t	0.831	0.845	0.745	0.0
305430792		472	glutathione synthetase [Cucumis sativus]	0.831	0.995	0.768	0.0
37222544		550	glutathione synthetase [Lotus japonicus]	0.950	0.976	0.677	0.0

>gi\|225451050\|ref\|XP_002284951.1\| PREDICTED: glutathione synthetase, chloroplastic-like [Vitis vinifera]	Back alignment and taxonomy information

 Score =  843 bits (2178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/492 (80%), Positives = 455/492 (92%), Gaps = 1/492 (0%)

Query: 74  LKCGRVKEMETRQGIATKEALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKV 133
           L  G+V ++ET+ G A +   +   +D+ L+Q+MVYDALVWSSLHGLVVGDR+V+R+G V
Sbjct: 17  LDSGKVDQVETQVGSAVRPLYDFHGIDEALLQRMVYDALVWSSLHGLVVGDRTVKRAGTV 76

Query: 134 PGVGLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFT 193
           PGVG+VHAPFALLP+SFPESH+++ACEL PIFNELVDRVSLD KFLQE+LSRTKKVD FT
Sbjct: 77  PGVGMVHAPFALLPMSFPESHWQQACELTPIFNELVDRVSLDWKFLQEALSRTKKVDSFT 136

Query: 194 SRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELH 253
           SRLLDIHSKM E+NKKE+IRLGLHRSDYMLDEQTK LLQIE+NTISSSF GLSCLV+ELH
Sbjct: 137 SRLLDIHSKMQEMNKKEEIRLGLHRSDYMLDEQTKLLLQIELNTISSSFPGLSCLVTELH 196

Query: 254 RSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQH 313
           RSLL HYG+ LGLDSK++PGNSAV QFAEA+A+AW EYNN RALV+ VVQ+EE NMYDQH
Sbjct: 197 RSLLNHYGKHLGLDSKRIPGNSAVTQFAEALAQAWKEYNNPRALVMFVVQTEERNMYDQH 256

Query: 314 WLSSVLKERHNVTTIRKTLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESE 373
           WLS+ +KER++VTTIRKTLAEIDAEG+LLPDGTL VGGQ +AV+YFRAGYAPTDYPSESE
Sbjct: 257 WLSTAMKERYDVTTIRKTLAEIDAEGKLLPDGTLTVGGQPVAVIYFRAGYAPTDYPSESE 316

Query: 374 WRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLW 433
           WRARL+MEQSSAVKCPSISYHLAGTKKIQQELAKPNVLE RFL+NK+DIAK+RKCFAGLW
Sbjct: 317 WRARLIMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLE-RFLENKDDIAKLRKCFAGLW 375

Query: 434 SLDDSEIVSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRI 493
           SLDDS I+ +AIE PE++VMKPQREGGGNNIYG+DV+ETLLRL+K+GT+EDAAYILMQRI
Sbjct: 376 SLDDSNIIKEAIERPEVFVMKPQREGGGNNIYGDDVRETLLRLQKEGTEEDAAYILMQRI 435

Query: 494 FPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVA 553
           FP+VS TFLMR+GIC+KDHAISELGIYGAYLR KEKVI+N+Q G+LMRTKV+SSNEGGVA
Sbjct: 436 FPNVSPTFLMREGICYKDHAISELGIYGAYLRNKEKVIINDQCGHLMRTKVSSSNEGGVA 495

Query: 554 AGFAVLDSLYLT 565
           AGFAVLDS+YLT
Sbjct: 496 AGFAVLDSIYLT 507

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|391881814\|gb\|AFF18845.1\| glutathione synthetase [Dimocarpus longan] gi\|426264372\|gb\|AFY17070.1\| glutathione synthetase [Dimocarpus longan]	Back alignment and taxonomy information

>gi\|298205043\|emb\|CBI34350.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255542534\|ref\|XP_002512330.1\| glutathione synthetase, putative [Ricinus communis] gi\|223548291\|gb\|EEF49782.1\| glutathione synthetase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|449485736\|ref\|XP_004157260.1\| PREDICTED: glutathione synthetase, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449435701\|ref\|XP_004135633.1\| PREDICTED: glutathione synthetase, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|50058090\|dbj\|BAD27391.1\| glutathione synthetase [Zinnia elegans]	Back alignment and taxonomy information

>gi\|15277522\|gb\|AAK93946.1\| glutathione synthetase GSHS1 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|305430792\|gb\|ADM53349.1\| glutathione synthetase [Cucumis sativus]	Back alignment and taxonomy information

>gi\|37222544\|gb\|AAK77663.2\|AF279703_1 glutathione synthetase [Lotus japonicus] gi\|37681498\|gb\|AAP69599.1\| glutathione synthetase [Lotus japonicus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		565
UNIPROTKB\|O23732		530	GSH2 "Glutathione synthetase,	0.837	0.892	0.732	2.9e-190
TAIR\|locus:2146395		539	GSH2 "glutathione synthetase 2	0.858	0.899	0.702	6.2e-188
UNIPROTKB\|O22494		546	GSH2 "Glutathione synthetase,	0.867	0.897	0.706	4.4e-187
ZFIN\|ZDB-GENE-041010-208		475	gss "glutathione synthetase" [	0.801	0.953	0.414	2.9e-87
UNIPROTKB\|P35668		474	gss "Glutathione synthetase" [	0.805	0.959	0.397	8.2e-83
FB\|FBgn0052495		562	CG32495 [Drosophila melanogast	0.578	0.581	0.416	2.8e-82
FB\|FBgn0030882		562	GS "Glutathione Synthetase" [D	0.578	0.581	0.416	2.8e-82
UNIPROTKB\|Q5EAC2		474	GSS "Glutathione synthetase" [	0.759	0.905	0.422	4.1e-81
UNIPROTKB\|F1S4X9		474	GSS "Uncharacterized protein"	0.803	0.957	0.402	1.1e-80
UNIPROTKB\|P48637		474	GSS "Glutathione synthetase" [	0.739	0.881	0.423	1.4e-80

UNIPROTKB\|O23732 GSH2 "Glutathione synthetase, chloroplastic" [Brassica juncea (taxid:3707)]	Back alignment and assigned GO terms

 Score = 1844 (654.2 bits), Expect = 2.9e-190, P = 2.9e-190
 Identities = 347/474 (73%), Positives = 410/474 (86%)

Query:    91 KEALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSF 150
             K  L+ +  D   VQK+VYDALVWSSLHGLVVGD++ QRSG VPGVG++HAP ALLP  F
Sbjct:    57 KPILDFEKFDDGFVQKLVYDALVWSSLHGLVVGDKTHQRSGTVPGVGMMHAPIALLPTPF 116

Query:   151 PESHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKE 210
             PES++ +ACE+APIFNELVDR+SLDGKF+Q+SLSRT+K D FTSRLL+IHSKMLE NK+E
Sbjct:   117 PESYWNQACEVAPIFNELVDRISLDGKFIQDSLSRTRKADVFTSRLLEIHSKMLESNKRE 176

Query:   211 DIRLGLHRSDYMLDEQTKSLLQIEVNTIXXXXXXXXXXXXELHRSLLIHYGERLGLDSKK 270
             +IRLGLHRSDYMLDE+TKSLLQIE+NTI            ELH+SLL  +G+ LGLDSK+
Sbjct:   177 EIRLGLHRSDYMLDEETKSLLQIEMNTISCSFPGFGRLVTELHQSLLRSHGDHLGLDSKR 236

Query:   271 VPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRK 330
             VP N +  QFA+AMAKAW EYNN RA+V+VVVQ +E NMYDQHWLSSVL+E+HN+ TIRK
Sbjct:   237 VPRNGSTSQFADAMAKAWLEYNNPRAVVMVVVQPDERNMYDQHWLSSVLREKHNIVTIRK 296

Query:   331 TLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPS 390
             +LAE++ EG +  DGTL VGGQ ++VVY+R+GY P DYPSESEW ARLL+EQSSAVKCPS
Sbjct:   297 SLAEVETEGRVHEDGTLTVGGQAVSVVYYRSGYTPRDYPSESEWNARLLIEQSSAVKCPS 356

Query:   391 ISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWSLDDSEIVSKAIENPEL 450
             I+YHLAGTKKIQQELAKP VLE RF+DNK+DIAK+RKCFAGLWSLDD EI+ KAIE PEL
Sbjct:   357 IAYHLAGTKKIQQELAKPGVLE-RFMDNKDDIAKLRKCFAGLWSLDDPEIIKKAIEKPEL 415

Query:   451 YVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHK 510
             +VMKPQREGGGNNIYG+DV+E LLRL+++G +E+AAYILMQRIFP VS  FL+RDG+ HK
Sbjct:   416 FVMKPQREGGGNNIYGDDVRENLLRLQREGEEENAAYILMQRIFPKVSNVFLLRDGVYHK 475

Query:   511 DHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYL 564
             D AISELG+YGAYLR KE+VI+NE SGYLMRTKV+SS+EGGVAAG+AVLDS+YL
Sbjct:   476 DQAISELGVYGAYLRNKERVIINEHSGYLMRTKVSSSDEGGVAAGYAVLDSIYL 529

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0043295 "glutathione binding" evidence=ISS

TAIR\|locus:2146395 GSH2 "glutathione synthetase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|O22494 GSH2 "Glutathione synthetase, chloroplastic" [Solanum lycopersicum (taxid:4081)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-041010-208 gss "glutathione synthetase" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|P35668 gss "Glutathione synthetase" [Xenopus laevis (taxid:8355)]	Back alignment and assigned GO terms

FB\|FBgn0052495 CG32495 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

FB\|FBgn0030882 GS "Glutathione Synthetase" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5EAC2 GSS "Glutathione synthetase" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1S4X9 GSS "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|P48637 GSS "Glutathione synthetase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22494	GSHB_SOLLC	6, ., 3, ., 2, ., 3	0.7276	0.8690	0.8992	N/A	no
P46416	GSHB_ARATH	6, ., 3, ., 2, ., 3	0.7209	0.8584	0.8998	yes	no
O23732	GSHB_BRAJU	6, ., 3, ., 2, ., 3	0.7256	0.8601	0.9169	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.3.2.3	0.991
3rd Layer	6.3.2	0.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XIII.1117.1	annotation not avaliable (507 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		565
PLN02977		478	PLN02977, PLN02977, glutathione synthetase	0.0
pfam03917		468	pfam03917, GSH_synth_ATP, Eukaryotic glutathione s	0.0
cd00228		471	cd00228, eu-GS, Eukaryotic Glutathione Synthetase	0.0
TIGR01986		472	TIGR01986, glut_syn_euk, glutathione synthetase, e	0.0
PTZ00055		619	PTZ00055, PTZ00055, glutathione synthetase; Provis	1e-74
pfam03199		105	pfam03199, GSH_synthase, Eukaryotic glutathione sy	4e-52

>gnl\|CDD\|215528 PLN02977, PLN02977, glutathione synthetase	Back alignment and domain information

 Score =  894 bits (2311), Expect = 0.0
 Identities = 346/471 (73%), Positives = 401/471 (85%), Gaps = 4/471 (0%)

Query: 98  SVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFRE 157
            + ++L+Q +V +ALVWSSLHGLVVGDRS QRSG VPGVGLVHAP +LLP  FP + F++
Sbjct: 9   GLTKELLQDLVEEALVWSSLHGLVVGDRSDQRSGTVPGVGLVHAPISLLPTPFPRAAFKQ 68

Query: 158 ACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLH 217
           ACELAP+FNELVDRVS DG+FLQE+L+RT+KVD FTSRLLDIH KM E NK+EDIRLGLH
Sbjct: 69  ACELAPLFNELVDRVSRDGEFLQETLARTRKVDEFTSRLLDIHEKMGERNKREDIRLGLH 128

Query: 218 RSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELHRSLLIHYGERLGLDSKKVPGNSAV 277
           RSDYMLDE T  LLQ+E+NTISSSF GLS LVS+LHRSLL  YG  LGLD ++VP N A+
Sbjct: 129 RSDYMLDEPTGLLLQVELNTISSSFPGLSSLVSQLHRSLLSRYGRVLGLDPERVPENPAL 188

Query: 278 IQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEIDA 337
            QFA+A+A AW E+ N  A+VL+VVQ EE NMYDQ WLS  L ERH + TIRKTLAEI A
Sbjct: 189 EQFADALAAAWKEFGNPSAVVLMVVQPEERNMYDQRWLSFALWERHGIRTIRKTLAEIAA 248

Query: 338 EGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAG 397
           EG L  DGTL V GQ +AVVYFRAGYAPTDYPSE+EWRARLL+E+SSAVKCPSI+YHLAG
Sbjct: 249 EGSLDEDGTLTVDGQPVAVVYFRAGYAPTDYPSEAEWRARLLLERSSAVKCPSIAYHLAG 308

Query: 398 TKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWSLDD---SEIVSKAIENPELYVMK 454
           TKK+QQELAKP VLE RFLD+KEDIAK+RKCFAGLWSLDD   +EIV  AIE PEL+V+K
Sbjct: 309 TKKVQQELAKPGVLE-RFLDDKEDIAKLRKCFAGLWSLDDEAAAEIVKLAIEKPELFVLK 367

Query: 455 PQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDHAI 514
           PQREGGGNNIYG+D++ETL RL+K+G ++ AAYILMQRIFP VS T+L+R+G+C +   I
Sbjct: 368 PQREGGGNNIYGDDLRETLERLQKEGGEDLAAYILMQRIFPPVSRTYLVRNGVCEEGETI 427

Query: 515 SELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT 565
           SELGIYGAYLR  +KVI+NEQSGYL+RTK ASS+EGGVAAGFAVLDS YLT
Sbjct: 428 SELGIYGAYLRNGDKVIINEQSGYLLRTKAASSDEGGVAAGFAVLDSPYLT 478

Length = 478

>gnl\|CDD\|217791 pfam03917, GSH_synth_ATP, Eukaryotic glutathione synthase, ATP binding domain	Back alignment and domain information

>gnl\|CDD\|238140 cd00228, eu-GS, Eukaryotic Glutathione Synthetase (eu-GS); catalyses the production of glutathione from gamma-glutamylcysteine and glycine in an ATP-dependent manner	Back alignment and domain information

>gnl\|CDD\|233670 TIGR01986, glut_syn_euk, glutathione synthetase, eukaryotic	Back alignment and domain information

>gnl\|CDD\|240247 PTZ00055, PTZ00055, glutathione synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|217420 pfam03199, GSH_synthase, Eukaryotic glutathione synthase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		565
PLN02977		478	glutathione synthetase	100.0
cd00228		471	eu-GS Eukaryotic Glutathione Synthetase (eu-GS); c	100.0
TIGR01986		472	glut_syn_euk glutathione synthetase, eukaryotic. T	100.0
KOG0021		468	consensus Glutathione synthetase [Secondary metabo	100.0
PTZ00055		619	glutathione synthetase; Provisional	100.0
PF03917		370	GSH_synth_ATP: Eukaryotic glutathione synthase, AT	100.0
PF03199		105	GSH_synthase: Eukaryotic glutathione synthase; Int	100.0
PF14403		445	CP_ATPgrasp_2: Circularly permuted ATP-grasp type	99.42
KOG0021		468	consensus Glutathione synthetase [Secondary metabo	97.59
PRK10507		619	bifunctional glutathionylspermidine amidase/glutat	96.45
PF04174		330	CP_ATPgrasp_1: A circularly permuted ATPgrasp ; In	94.49
PHA02117		397	glutathionylspermidine synthase domain-containing	90.55
COG2308		488	Uncharacterized conserved protein [Function unknow	87.62

>PLN02977 glutathione synthetase	Back alignment and domain information

Probab=100.00  E-value=4.5e-171  Score=1365.59  Aligned_cols=474  Identities=73%  Similarity=1.143  Sum_probs=459.8

Q ss_pred             ccccCCCCCCHHHHHHHHHHHHHHHHHcceeeeecCCcCCCCCCCcceeeeeeeecCCCCCHHHHHHHHHHhhHHHHHHH
Q 008446           91 KEALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREACELAPIFNELVD  170 (565)
Q Consensus        91 ~~~~~~~~l~~~~~~~L~~~a~dwa~~hGl~~~~~~~~~~~~~~~~~~~~aPftL~PspfPr~~Fe~A~~lq~~~N~L~~  170 (565)
                      +|.+++|.|+++++++|+++|+|||++|||+|++++.+.++..+++.++||||||||+||||++|++|+++|++||+|||
T Consensus         2 ~~~~~~p~l~~~~~~~l~~~a~~wa~~hGl~~~~~~~~~~~~~~~~~~~~aP~tL~Ptpfpr~~f~~a~~~q~~~neL~~   81 (478)
T PLN02977          2 APIIDVPGLTKELLQDLVEEALVWSSLHGLVVGDRSDQRSGTVPGVGLVHAPISLLPTPFPRAAFKQACELAPLFNELVD   81 (478)
T ss_pred             CCcccCCCCCHHHHHHHHHHHHHHHHhCCeEEecCccccccCCCccceEeCCEEecCCcCCHHHHHHHHHHHHHHHHHHH
Confidence            46678999999999999999999999999999999887766667788999999999999999999999999999999999


Q ss_pred             HhhCCHHHHHHHHhcccCCChhhHHHHHHHHHHHhccCCCceeeeeeeccccccccCCccceEEeeceecccccchhhhH
Q 008446          171 RVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVS  250 (565)
Q Consensus       171 rVS~D~~fL~~~l~~~~~~D~Ft~~L~~I~~~v~~~g~~q~i~LGL~RSDYMld~~~~~lKQVE~NTIS~SFggLs~~vs  250 (565)
                      +||+|.+||+++|++++++|+||++||+||++|.++++.|+++|||||||||+|..++++||||||||||||||||++|+
T Consensus        82 ~vs~D~~fL~~~l~~~~~~D~Ft~~L~~i~~~v~~~~~~q~~~Lgl~RSDYMld~~~~~~KQVE~NTIS~sfggls~~v~  161 (478)
T PLN02977         82 RVSRDGEFLQETLARTRKVDEFTSRLLDIHEKMGERNKREDIRLGLHRSDYMLDEPTGLLLQVELNTISSSFPGLSSLVS  161 (478)
T ss_pred             HHHccHHHHHHHHHhhhccCHHHHHHHHHHHHHHhcCCcCceEEeeeehhhcccCCCCCeEEEEEeeeeeccchhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccccCCCCCCCCCCchHHHHHHHHHHHHHHhCCCCcEEEEEEeCCCCccchhhHHHHHHHhhCCceEEEe
Q 008446          251 ELHRSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRK  330 (565)
Q Consensus       251 ~lHr~l~~~y~~~~~~~~~~lp~N~al~~la~gLa~A~~~Y~~~~avVLfVVq~~ErNi~DQr~lE~~L~~~~gI~viR~  330 (565)
                      +|||||+++|+....++..++|+|++++++|+|||+||++|++++++||||||++|||+||||+|||+|+++|||+++|+
T Consensus       162 ~lH~~l~~~~~~~~~~~~~~lp~N~~~~~la~gla~A~~~y~~~~~~vlfVVq~~ErNv~DQr~le~~L~~~~gI~~~R~  241 (478)
T PLN02977        162 QLHRSLLSRYGRVLGLDPERVPENPALEQFADALAAAWKEFGNPSAVVLMVVQPEERNMYDQRWLSFALWERHGIRTIRK  241 (478)
T ss_pred             HHHHHHHHhcccccccccccCCCCccHHHHHHHHHHHHHHhCCCCcEEEEEECCCCcchhhHHHHHHHHHHhcCCeEEEe
Confidence            99999999898877777788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHhhcceecCCCceEEcCeEEEEEEeecCCCCCCCCChhhHHHHHhhhhcccccCCchhhhhhccHHHHHhhcCccc
Q 008446          331 TLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNV  410 (565)
Q Consensus       331 Tl~el~~~~~l~~~~~L~vdg~EVaVVYfRaGY~P~dYpse~eW~aRl~LE~S~AIKCPsI~~qLaGtKKVQQ~La~pgv  410 (565)
                      ||+||.++++++++|+|+++|.||||||||+||+|+|||+|.+|++|++||+|+|||||||++||||||||||+|++|++
T Consensus       242 t~~el~~~~~l~~~~~L~~~~~eVavvYfRaGY~P~dY~se~~W~aRl~lE~S~AIKcPsi~~qLaGtKKVQQ~La~p~v  321 (478)
T PLN02977        242 TLAEIAAEGSLDEDGTLTVDGQPVAVVYFRAGYAPTDYPSEAEWRARLLLERSSAVKCPSIAYHLAGTKKVQQELAKPGV  321 (478)
T ss_pred             eHHHHhhhceeCCCCcEEEcCEEEEEEEEecccChhhCCCHHHHHHHHHHHhcCcccCCCHHHHhcccHHHHHHhcCchH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccCCCHHHHHHHHHhccccccCCcH---HHHHHhhcCCCCccccCCCCCCCccccchhHHHHHHhccCCCCccccce
Q 008446          411 LESRFLDNKEDIAKVRKCFAGLWSLDDS---EIVSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAY  487 (565)
Q Consensus       411 Le~rFl~~~~~~~~lr~tFa~lysLD~~---~~v~~A~~~P~~yVLKPQREGGGNNiYGedI~~~L~~l~~~~~~e~~aY  487 (565)
                      || ||++|++++++||+||++||+||++   +++++|+++|++||||||||||||||||+||+++|++|++++++||++|
T Consensus       322 Le-rfl~~~~~~~~lr~tFa~~y~Ld~~~~~~~~~~a~~~p~~~VLKPQrEGGGNNiYg~dI~~~L~~l~~~~~~e~~ay  400 (478)
T PLN02977        322 LE-RFLDDKEDIAKLRKCFAGLWSLDDEAAAEIVKLAIEKPELFVLKPQREGGGNNIYGDDLRETLERLQKEGGEDLAAY  400 (478)
T ss_pred             HH-HhcCCHHHHHHHHHHhhccccCCchHHHHHHHhhhhChhheeEcCcCccchhhcchHHHHHHHHHcccCChhhhhhe
Confidence            99 9999999999999999999999995   4788999999999999999999999999999999999977666799999


Q ss_pred             eeccccCCCCcceEEEecCccccccceeccceeEEEEecCcEEEeeccceEEEeecCCCCCCCceeeccccccccccC
Q 008446          488 ILMQRIFPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT  565 (565)
Q Consensus       488 ILMerI~Pp~~~n~lvR~g~~~~~~~vSELGIfG~~l~~~~~ii~N~~~GyLlRTK~~~s~EGGVaaG~g~LDS~~L~  565 (565)
                      ||||||+||+++|++||+|++..+++||||||||++++++++++.|+++|||||||++++|||||||||||||||+|+
T Consensus       401 ILMerI~P~~~~~~~vR~g~~~~~~~iSELGIfG~~l~~~~~v~~N~~~GyLlRTK~~~s~EGGVaaG~g~lDS~~L~  478 (478)
T PLN02977        401 ILMQRIFPPVSRTYLVRNGVCEEGETISELGIYGAYLRNGDKVIINEQSGYLLRTKAASSDEGGVAAGFAVLDSPYLT  478 (478)
T ss_pred             ehhhccCCCCCCeEEEECCceeeCCeeeeccceEEEEECCCeEEeccceeEEEEccCCCCCCCCeeeceeeccceeeC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999996

>cd00228 eu-GS Eukaryotic Glutathione Synthetase (eu-GS); catalyses the production of glutathione from gamma-glutamylcysteine and glycine in an ATP-dependent manner	Back alignment and domain information

>TIGR01986 glut_syn_euk glutathione synthetase, eukaryotic	Back alignment and domain information

>KOG0021 consensus Glutathione synthetase [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>PTZ00055 glutathione synthetase; Provisional	Back alignment and domain information

>PF03917 GSH_synth_ATP: Eukaryotic glutathione synthase, ATP binding domain; InterPro: IPR005615 This entry represents eukaryotic glutathione synthetase (6	Back alignment and domain information

>PF03199 GSH_synthase: Eukaryotic glutathione synthase; InterPro: IPR004887 This entry represents the substrate-binding domain of glutathione synthetase (6	Back alignment and domain information

>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2	Back alignment and domain information

>KOG0021 consensus Glutathione synthetase [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>PRK10507 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase; Provisional	Back alignment and domain information

>PF04174 CP_ATPgrasp_1: A circularly permuted ATPgrasp ; InterPro: IPR007302 This is a domain of unknown function	Back alignment and domain information

>PHA02117 glutathionylspermidine synthase domain-containing protein	Back alignment and domain information

>COG2308 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		565
3kaj_A		499	Apoenzyme Structure Of Homoglutathione Synthetase F		0.0
2hgs_A		474	Human Glutathione Synthetase Length = 474		1e-87
1m0t_A		491	Yeast Glutathione Synthase Length = 491		2e-63
2wyo_A		562	Trypanosoma Brucei Glutathione Synthetase Length =		2e-45

>pdb|3KAJ|A Chain A, Apoenzyme Structure Of Homoglutathione Synthetase From Glycine Max In Open Conformation Length = 499

Back alignment and structure

Iteration: 1

Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/467 (69%), Positives = 397/467 (85%), Gaps = 1/467 (0%) Query: 99 VDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREA 158 +DQ L+Q +VYDALVWS+L+ L+VGD+SVQRSG+VPGVGLVH P +LLP FPESH+++ Sbjct: 34 IDQKLLQNIVYDALVWSTLNCLLVGDKSVQRSGRVPGVGLVHLPLSLLPGPFPESHWKQG 93 Query: 159 CELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLHR 218 CELAPIFNELVDRVSLDGKFLQESLSRTK D FTSRLLDIHSKML++NKKEDIR+G+ R Sbjct: 94 CELAPIFNELVDRVSLDGKFLQESLSRTKNADEFTSRLLDIHSKMLQINKKEDIRMGIVR 153 Query: 219 SDYMLDEQTKSLLQIEVNTIXXXXXXXXXXXXELHRSLLIHYGERLGLDSKKVPGNSAVI 278 SDYM+DE+TKSLLQIE+NTI LH+SLL YG+ LGL+S +VP N+AV Sbjct: 154 SDYMIDEKTKSLLQIEMNTISTSFALIGCLMTGLHKSLLSQYGKFLGLNSNRVPANNAVD 213 Query: 279 QFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEIDAE 338 Q AEA+AKAW+EYNN RA +LVVVQ EE NMY+QH++S++L+E+H++ +IRKTL EID E Sbjct: 214 QSAEALAKAWSEYNNPRAAILVVVQVEERNMYEQHYISALLREKHHIRSIRKTLTEIDQE 273 Query: 339 GELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGT 398 G++LPDGTL V GQ I+VVYFRAGY P DYPSESEWRARLLMEQSSA+KCP+ISYHL GT Sbjct: 274 GKILPDGTLSVDGQAISVVYFRAGYTPKDYPSESEWRARLLMEQSSAIKCPTISYHLVGT 333 Query: 399 KKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWSLDDSEIVSKAIENPELYVMKPQRE 458 KKIQQELAKP VLE RF++NK+ IAK+R CFAGLWSL+DS+IV KAIENPEL+VMKPQRE Sbjct: 334 KKIQQELAKPGVLE-RFVENKDHIAKLRACFAGLWSLEDSDIVKKAIENPELFVMKPQRE 392 Query: 459 GGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDHAISELG 518 GGGNNIYG++++ETLL+L++ G+ EDAAYILMQRIFP+ S L+RDG H ISE G Sbjct: 393 GGGNNIYGDELRETLLKLQEAGSQEDAAYILMQRIFPATSPAILVRDGNWDTGHVISEAG 452 Query: 519 IYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT 565 I+G YLR K+K+I+N +SGY++RTK++SS EGGV GF V+D++YLT Sbjct: 453 IFGTYLRNKDKIIINNESGYMVRTKISSSYEGGVLPGFGVVDTVYLT 499

PyMOL of 3kaj

>pdb|2HGS|A Chain A, Human Glutathione Synthetase Length = 474

Back alignment and structure

>pdb|1M0T|A Chain A, Yeast Glutathione Synthase Length = 491

Back alignment and structure

>pdb|2WYO|A Chain A, Trypanosoma Brucei Glutathione Synthetase Length = 562

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		565
3kal_A		499	Homoglutathione synthetase; dimer, ATP-grAsp domai	0.0
2hgs_A		474	Protein (glutathione synthetase); amine/carboxylat	0.0
1m0w_A		491	Glutathione synthetase; amine/carboxylate ligase,	0.0
2wyo_A		562	Glutathione synthetase; ligase, ATP-grAsp; HET: GS	1e-165
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09

>3kal_A Homoglutathione synthetase; dimer, ATP-grAsp domain; HET: ADP HGS; 1.90A {Glycine max} PDB: 3kak_A* 3kaj_A* Length = 499	Back alignment and structure

 Score =  619 bits (1597), Expect = 0.0
 Identities = 331/473 (69%), Positives = 408/473 (86%), Gaps = 1/473 (0%)

Query: 93  ALNLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPE 152
             +   +DQ L+Q +VYDALVWS+L+ L+VGD+SVQRSG+VPGVGLVH P +LLP  FPE
Sbjct: 28  LFDYHRIDQKLLQNIVYDALVWSTLNCLLVGDKSVQRSGRVPGVGLVHLPLSLLPGPFPE 87

Query: 153 SHFREACELAPIFNELVDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDI 212
           SH+++ CELAPIFNELVDRVSLDGKFLQESLSRTK  D FTSRLLDIHSKML++NKKEDI
Sbjct: 88  SHWKQGCELAPIFNELVDRVSLDGKFLQESLSRTKNADEFTSRLLDIHSKMLQINKKEDI 147

Query: 213 RLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCLVSELHRSLLIHYGERLGLDSKKVP 272
           R+G+ RSDYM+DE+TKSLLQIE+NTIS+SF+ + CL++ LH+SLL  YG+ LGL+S +VP
Sbjct: 148 RMGIVRSDYMIDEKTKSLLQIEMNTISTSFALIGCLMTGLHKSLLSQYGKFLGLNSNRVP 207

Query: 273 GNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTL 332
            N+AV Q AEA+AKAW+EYNN RA +LVVVQ EE NMY+QH++S++L+E+H++ +IRKTL
Sbjct: 208 ANNAVDQSAEALAKAWSEYNNPRAAILVVVQVEERNMYEQHYISALLREKHHIRSIRKTL 267

Query: 333 AEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSIS 392
            EID EG++LPDGTL V GQ I+VVYFRAGY P DYPSESEWRARLLMEQSSA+KCP+IS
Sbjct: 268 TEIDQEGKILPDGTLSVDGQAISVVYFRAGYTPKDYPSESEWRARLLMEQSSAIKCPTIS 327

Query: 393 YHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWSLDDSEIVSKAIENPELYV 452
           YHL GTKKIQQELAKP VLE RF++NK+ IAK+R CFAGLWSL+DS+IV KAIENPEL+V
Sbjct: 328 YHLVGTKKIQQELAKPGVLE-RFVENKDHIAKLRACFAGLWSLEDSDIVKKAIENPELFV 386

Query: 453 MKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLTFLMRDGICHKDH 512
           MKPQREGGGNNIYG++++ETLL+L++ G+ EDAAYILMQRIFP+ S   L+RDG     H
Sbjct: 387 MKPQREGGGNNIYGDELRETLLKLQEAGSQEDAAYILMQRIFPATSPAILVRDGNWDTGH 446

Query: 513 AISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT 565
            ISE GI+G YLR K+K+I+N +SGY++RTK++SS EGGV  GF V+D++YLT
Sbjct: 447 VISEAGIFGTYLRNKDKIIINNESGYMVRTKISSSYEGGVLPGFGVVDTVYLT 499

PyMOL of 3kal

>2hgs_A Protein (glutathione synthetase); amine/carboxylate ligase; HET: ADP GSH; 2.10A {Homo sapiens} SCOP: c.30.1.4 d.142.1.6 Length = 474	Back alignment and structure

>1m0w_A Glutathione synthetase; amine/carboxylate ligase, structural genomics, PSI, protein structure initiative; HET: ANP 3GC; 1.80A {Saccharomyces cerevisiae} SCOP: c.30.1.4 d.142.1.6 PDB: 1m0t_A* Length = 491	Back alignment and structure

>2wyo_A Glutathione synthetase; ligase, ATP-grAsp; HET: GSH; 3.15A {Trypanosoma brucei} Length = 562	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		565
3kal_A		499	Homoglutathione synthetase; dimer, ATP-grAsp domai	100.0
2hgs_A		474	Protein (glutathione synthetase); amine/carboxylat	100.0
1m0w_A		491	Glutathione synthetase; amine/carboxylate ligase,	100.0
2wyo_A		562	Glutathione synthetase; ligase, ATP-grAsp; HET: GS	100.0
3n6x_A		474	Putative glutathionylspermidine synthase; domain o	98.71
2vob_A		652	Trypanothione synthetase; ligase; 2.3A {Leishmania	97.83
2io8_A		619	Bifunctional glutathionylspermidine synthetase/ami	97.58

>3kal_A Homoglutathione synthetase; dimer, ATP-grAsp domain; HET: ADP HGS; 1.90A {Glycine max} PDB: 3kak_A* 3kaj_A*	Back alignment and structure

Probab=100.00  E-value=1.6e-175  Score=1401.68  Aligned_cols=475  Identities=70%  Similarity=1.146  Sum_probs=456.6

Q ss_pred             ccccc-CCCCCCHHHHHHHHHHHHHHHHHcceeeeecCCcCCCCCCCcceeeeeeeecCCCCCHHHHHHHHHHhhHHHHH
Q 008446           90 TKEAL-NLQSVDQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREACELAPIFNEL  168 (565)
Q Consensus        90 ~~~~~-~~~~l~~~~~~~L~~~a~dwa~~hGl~~~~~~~~~~~~~~~~~~~~aPftL~PspfPr~~Fe~A~~lq~~~N~L  168 (565)
                      ++|.+ +||.++++++++|+++|+|||++|||+|++++.+.++..+++.++|||||||||||||++|++|+++|++||+|
T Consensus        24 ~~~~~~~~~~~~~~~~~~l~~~a~dwal~hGl~~~~~~~~~~~~~~~~~~~~aPftL~PspfPr~~fe~a~~vq~~~NeL  103 (499)
T 3kal_A           24 AAPPLFDYHRIDQKLLQNIVYDALVWSTLNCLLVGDKSVQRSGRVPGVGLVHLPLSLLPGPFPESHWKQGCELAPIFNEL  103 (499)
T ss_dssp             -CCCCCCTTSSCHHHHHHHHHHHHHHHHHTTCEEECTTSTTTTTSTTSSEEECCEESSCEEECHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcccCCHHHHHHHHHHHHHHHHHcCeEEecCCCccccccccccceecceEecCCCCCHHHHHHHHHHHHHHHHH
Confidence            67755 99999999999999999999999999999998877766777889999999999999999999999999999999


Q ss_pred             HHHhhCCHHHHHHHHhcccCCChhhHHHHHHHHHHHhccCCCceeeeeeeccccccccCCccceEEeeceecccccchhh
Q 008446          169 VDRVSLDGKFLQESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTKSLLQIEVNTISSSFSGLSCL  248 (565)
Q Consensus       169 ~~rVS~D~~fL~~~l~~~~~~D~Ft~~L~~I~~~v~~~g~~q~i~LGL~RSDYMld~~~~~lKQVE~NTIS~SFggLs~~  248 (565)
                      ||+||+|.+||.++|++++++|+||++||+||++|+++|++|+++|||||||||+|.+++++||||||||||||||||++
T Consensus       104 ~~~vs~D~~fL~~~l~~~~~~D~Ft~~L~~I~~~v~~~g~~q~l~Lgl~RSDYMld~~~~~lkQVEfNTIsaSFggls~~  183 (499)
T 3kal_A          104 VDRVSLDGKFLQESLSRTKNADEFTSRLLDIHSKMLQINKKEDIRMGIVRSDYMIDEKTKSLLQIEMNTISTSFALIGCL  183 (499)
T ss_dssp             HHHHHTCHHHHHHHTHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEETTTTEEEEEEEECSSCCCHHHHHH
T ss_pred             HHHHhcCHHHHHHHHHhhcCcCHHHHHHHHHHHHHHhcCCCCceeeeeeehhhhcCCCCCceEEEEeechhhhcchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhccccCCCCCCCCCCchHHHHHHHHHHHHHHhCCCCcEEEEEEeCCCCccchhhHHHHHHHhhCCceEE
Q 008446          249 VSELHRSLLIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTI  328 (565)
Q Consensus       249 vs~lHr~l~~~y~~~~~~~~~~lp~N~al~~la~gLa~A~~~Y~~~~avVLfVVq~~ErNi~DQr~lE~~L~~~~gI~vi  328 (565)
                      +++|||||++.|+.....+..++|+|++++++|+|||+||++|++++++||||||++|||+||||+|||+|+++|||+++
T Consensus       184 v~~lHr~l~~~~~~~~~~~~~~lp~N~a~~~la~gla~A~~~Y~~~~a~VLfVVQ~~ErNifDQr~lE~~L~~~~gI~vi  263 (499)
T 3kal_A          184 MTGLHKSLLSQYGKFLGLNSNRVPANNAVDQSAEALAKAWSEYNNPRAAILVVVQVEERNMYEQHYISALLREKHHIRSI  263 (499)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGSCCCCHHHHHHHHHHHHHHHHTCTTCEEEEEECSSCTTHHHHHHHHHHHHHHHCCCEE
T ss_pred             HHHHHHHHHHhcccccccccccCCCChhHHHHHHHHHHHHHHhCCCCcEEEEEEcCCCccHHhHHHHHHHHHHhCCCcEE
Confidence            99999999998876655555679999999999999999999999999999999999999999999999999999999999


Q ss_pred             EechhhHhhcceecCCCceEEcCeEEEEEEeecCCCCCCCCChhhHHHHHhhhhcccccCCchhhhhhccHHHHHhhcCc
Q 008446          329 RKTLAEIDAEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKP  408 (565)
Q Consensus       329 R~Tl~el~~~~~l~~~~~L~vdg~EVaVVYfRaGY~P~dYpse~eW~aRl~LE~S~AIKCPsI~~qLaGtKKVQQ~La~p  408 (565)
                      |+||+||.++++++++++|+++|.||||||||+||+|+|||+|++|++|++||+|+|||||||+|||||||||||+|++|
T Consensus       264 R~t~~el~~~~~l~~~~~L~~~g~eVaVVYfRaGY~P~dYpse~~W~aRl~lE~S~AIKCPsI~~qLaGtKKVQQ~La~p  343 (499)
T 3kal_A          264 RKTLTEIDQEGKILPDGTLSVDGQAISVVYFRAGYTPKDYPSESEWRARLLMEQSSAIKCPTISYHLVGTKKIQQELAKP  343 (499)
T ss_dssp             EECHHHHHHHEEECTTSCEEETTEEEEEEEEESCSSGGGCSSHHHHHHHHHHHHSSSEEETCHHHHHHTSHHHHHHTTST
T ss_pred             EEEHHHHhhhceeCCCCeeEEcceEEEEEEeecCcCcccCCCHHHHHHHHHHHhcCcccCCCHHHHHhhhHHHHHHhcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhccCCCHHHHHHHHHhccccccCCcHHHHHHhhcCCCCccccCCCCCCCccccchhHHHHHHhccCCCCcccccee
Q 008446          409 NVLESRFLDNKEDIAKVRKCFAGLWSLDDSEIVSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYI  488 (565)
Q Consensus       409 gvLe~rFl~~~~~~~~lr~tFa~lysLD~~~~v~~A~~~P~~yVLKPQREGGGNNiYGedI~~~L~~l~~~~~~e~~aYI  488 (565)
                      ++|| ||+++++++++||+||++|||||+++++++|+++|++||||||||||||||||+||+++|++|+++|++||++||
T Consensus       344 ~vLe-rFl~~~~~~~~lr~tFa~ly~LD~~~~~~~a~~~p~~~VLKPQREGGGNNiYg~dI~~~L~~l~~~~~~e~~ayI  422 (499)
T 3kal_A          344 GVLE-RFVENKDHIAKLRACFAGLWSLEDSDIVKKAIENPELFVMKPQREGGGNNIYGDELRETLLKLQEAGSQEDAAYI  422 (499)
T ss_dssp             TTHH-HHCCCHHHHHHHHHHCCCEEETTCTTHHHHHHHCGGGEEEECSCCSSSCCBCHHHHHHHHHHCCC-----GGGCE
T ss_pred             hHHH-HhcCCHHHHHHHHHHhhccCCCCchHHHHhhhhCHHHeeecccccCCccccchHHHHHHHHhcCccchhhHHHHH
Confidence            9999 999999999999999999999999999999999999999999999999999999999999999987778999999


Q ss_pred             eccccCCCCcceEEEecCccccccceeccceeEEEEecCcEEEeeccceEEEeecCCCCCCCceeeccccccccccC
Q 008446          489 LMQRIFPSVSLTFLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT  565 (565)
Q Consensus       489 LMerI~Pp~~~n~lvR~g~~~~~~~vSELGIfG~~l~~~~~ii~N~~~GyLlRTK~~~s~EGGVaaG~g~LDS~~L~  565 (565)
                      |||||+||+++|++||+|++...++||||||||+++++++++++|+++|||||||++++|||||||||||||||+|+
T Consensus       423 LMerI~Pp~~~n~lvR~g~~~~~~~iSELGIfG~~l~~~~~i~~N~~~G~LlRTK~~~s~EGGVaaG~g~LDS~~L~  499 (499)
T 3kal_A          423 LMQRIFPATSPAILVRDGNWDTGHVISEAGIFGTYLRNKDKIIINNESGYMVRTKISSSYEGGVLPGFGVVDTVYLT  499 (499)
T ss_dssp             EEECCCCCCEEEEEEETTEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSCCCTTTTTCEEECEEEC
T ss_pred             HHhhcCCCCCCeEEEECCccccCCeeeeccceEEEEeCCCeEEEcCcceEEEecCCCCCCCCCeeeeeeeccceeeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999996

PyMOL of 3kal

>2hgs_A Protein (glutathione synthetase); amine/carboxylate ligase; HET: ADP GSH; 2.10A {Homo sapiens} SCOP: c.30.1.4 d.142.1.6	Back alignment and structure

>1m0w_A Glutathione synthetase; amine/carboxylate ligase, structural genomics, PSI, protein structure initiative; HET: ANP 3GC; 1.80A {Saccharomyces cerevisiae} SCOP: c.30.1.4 d.142.1.6 PDB: 1m0t_A*	Back alignment and structure

>2wyo_A Glutathione synthetase; ligase, ATP-grAsp; HET: GSH; 3.15A {Trypanosoma brucei}	Back alignment and structure

>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}	Back alignment and structure

>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A	Back alignment and structure

>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		565
d1m0wa2		373	d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathio	3e-76
d1m0wa2		373	d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathio	1e-53
d2hgsa4		370	d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathio	5e-74
d2hgsa4		370	d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathio	3e-72
d2hgsa1		102	c.30.1.4 (A:202-303) Eukaryotic glutathione synthe	1e-48
d1m0wa1		108	c.30.1.4 (A:216-323) Eukaryotic glutathione synthe	5e-48

>d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 373	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Eukaryotic glutathione synthetase ATP-binding domain
domain: Eukaryotic glutathione synthetase ATP-binding domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  244 bits (624), Expect = 3e-76
 Identities = 73/195 (37%), Positives = 113/195 (57%), Gaps = 12/195 (6%)

Query: 375 RARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFLDNKEDIAKVRKCFAGLWS 434
            +  L+ ++      ++  + +  KKIQQ L    VL  +++ + E  + + K F  ++ 
Sbjct: 185 DSGYLLSKA---LAKAVESYKSQQKKIQQLLTDEGVLG-KYISDAEKKSSLLKTFVKIYP 240

Query: 435 LDDSEI----VSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILM 490
           LDD+++       A+  P  YV+KPQREGGGNN+Y E++   L  +++       AYILM
Sbjct: 241 LDDTKLGREGKRLALSEPSKYVLKPQREGGGNNVYKENIPNFLKGIEER---HWDAYILM 297

Query: 491 QRIFPSVSLT-FLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNE 549
           + I P ++    ++RD   + +  ISELGIYG  L   E+V+ NE SG L+R+K  +SNE
Sbjct: 298 ELIEPELNENNIILRDNKSYNEPIISELGIYGCVLFNDEQVLSNEFSGSLLRSKFNTSNE 357

Query: 550 GGVAAGFAVLDSLYL 564
           GGVAAGF  LDS+ L
Sbjct: 358 GGVAAGFGCLDSIIL 372

PyMOL of d1m0wa2

>d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 373	Back information, alignment and structure

>d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 370	Back information, alignment and structure

>d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 370	Back information, alignment and structure

>d2hgsa1 c.30.1.4 (A:202-303) Eukaryotic glutathione synthetase, substrate-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 102	Back information, alignment and structure

>d1m0wa1 c.30.1.4 (A:216-323) Eukaryotic glutathione synthetase, substrate-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 108	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		565
d2hgsa4		370	Eukaryotic glutathione synthetase ATP-binding doma	100.0
d1m0wa2		373	Eukaryotic glutathione synthetase ATP-binding doma	100.0
d1m0wa1		108	Eukaryotic glutathione synthetase, substrate-bindi	100.0
d2hgsa1		102	Eukaryotic glutathione synthetase, substrate-bindi	100.0

>d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Eukaryotic glutathione synthetase ATP-binding domain
domain: Eukaryotic glutathione synthetase ATP-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-122  Score=958.02  Aligned_cols=353  Identities=40%  Similarity=0.654  Sum_probs=328.5

Q ss_pred             CHHHHHHHHHHHHHHHHHcceeeeecCCcCCCCCCCcceeeeeeeecCCCCCHHHHHHHHHHhhHHHHHHHHhhCCHHHH
Q 008446          100 DQDLVQKMVYDALVWSSLHGLVVGDRSVQRSGKVPGVGLVHAPFALLPVSFPESHFREACELAPIFNELVDRVSLDGKFL  179 (565)
Q Consensus       100 ~~~~~~~L~~~a~dwa~~hGl~~~~~~~~~~~~~~~~~~~~aPftL~PspfPr~~Fe~A~~lq~~~N~L~~rVS~D~~fL  179 (565)
                      +++++++|+++|+|||++|||+||+++.+.++    ..++||||||+||||||++|++|+++|++||+|||+||+|.+||
T Consensus         9 d~~~~~~l~~~a~dwa~~hGl~m~~~~~~~~~----~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~neL~~~vS~D~~fL   84 (370)
T d2hgsa4           9 DKQQLEELARQAVDRALAEGVLLRTSQEPTSS----EVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQNAAFL   84 (370)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCEEECSSCTTCC----SSEEECCEESSCCEECHHHHHHHHHTHHHHHHHHHHHHHCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHcCeeeccCCCCCCC----CceeeCCeEecCCcCCHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence            56788999999999999999999998764332    35799999999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCChhhHHHHHHHHHHHhccCCCceeeeeeeccccccccCC---ccceEEeeceecccccchhhhHHHHHHH
Q 008446          180 QESLSRTKKVDPFTSRLLDIHSKMLELNKKEDIRLGLHRSDYMLDEQTK---SLLQIEVNTISSSFSGLSCLVSELHRSL  256 (565)
Q Consensus       180 ~~~l~~~~~~D~Ft~~L~~I~~~v~~~g~~q~i~LGL~RSDYMld~~~~---~lKQVE~NTIS~SFggLs~~vs~lHr~l  256 (565)
                      .++|++++++|+||++||+||++|+++|++|+++|||||||||+|...+   +|||||||||||||||||++|++|||||
T Consensus        85 ~~~l~~~~~~D~Ft~~L~~i~~~v~~~g~~q~l~Lgl~RSDYMl~~~~~~~~~~KQVE~NTIS~sfggls~~v~~lHr~l  164 (370)
T d2hgsa4          85 EQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVFLGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHV  164 (370)
T ss_dssp             HHHHHTHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECSSSCEEEEEEEEECSSCCCHHHHHHSHHHHHHH
T ss_pred             HHHHHHHhccCHHHHHHHHHHHHHHhhCCccceEEEEeechhhccCCCCcccceeEEeeceeeeecchHhhhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999997544   6999999999999999999999999999


Q ss_pred             HHhhccccCCCCCCCCCCchHHHHHHHHHHHHHHhCCCCcEEEEEEeCCCCccchhhHHHHHHHhhCCceEEEechhhHh
Q 008446          257 LIHYGERLGLDSKKVPGNSAVIQFAEAMAKAWTEYNNARALVLVVVQSEEHNMYDQHWLSSVLKERHNVTTIRKTLAEID  336 (565)
Q Consensus       257 ~~~y~~~~~~~~~~lp~N~al~~la~gLa~A~~~Y~~~~avVLfVVq~~ErNi~DQr~lE~~L~~~~gI~viR~Tl~el~  336 (565)
                      ++.+...  .+..++|+|+++.++|.||++||+.|+                                            
T Consensus       165 ~~~~~~~--~~~~~~p~n~~~~~la~gla~a~~~y~--------------------------------------------  198 (370)
T d2hgsa4         165 LSVLSKT--KEAGKILSNNPSKGLALGIAKAWELYG--------------------------------------------  198 (370)
T ss_dssp             HHHTTCH--HHHTTSCCCCHHHHHHHHHHHHHHHHC--------------------------------------------
T ss_pred             HHhhccc--cccccCCCCCcHHHHHHHHHHHHHHHh--------------------------------------------
Confidence            9876543  234679999999999999999999883                                            


Q ss_pred             hcceecCCCceEEcCeEEEEEEeecCCCCCCCCChhhHHHHHhhhhcccccCCchhhhhhccHHHHHhhcCccchhhccC
Q 008446          337 AEGELLPDGTLLVGGQVIAVVYFRAGYAPTDYPSESEWRARLLMEQSSAVKCPSISYHLAGTKKIQQELAKPNVLESRFL  416 (565)
Q Consensus       337 ~~~~l~~~~~L~vdg~EVaVVYfRaGY~P~dYpse~eW~aRl~LE~S~AIKCPsI~~qLaGtKKVQQ~La~pgvLe~rFl  416 (565)
                                                                                  |+|||||+|++||+|| +|+
T Consensus       199 ------------------------------------------------------------~~KKvQQ~La~pgvLe-~Fl  217 (370)
T d2hgsa4         199 ------------------------------------------------------------STKKVQQELSRPGMLE-MLL  217 (370)
T ss_dssp             ------------------------------------------------------------CSHHHHHHTTSTTHHH-HHS
T ss_pred             ------------------------------------------------------------hhhHHHHHHcCCCHHH-HHc
Confidence                                                                        4799999999999999 999


Q ss_pred             CC-HHHHHHHHHhccccccCCcH----HHHHHhhcCCCCccccCCCCCCCccccchhHHHHHHhccCCCCccccceeecc
Q 008446          417 DN-KEDIAKVRKCFAGLWSLDDS----EIVSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQ  491 (565)
Q Consensus       417 ~~-~~~~~~lr~tFa~lysLD~~----~~v~~A~~~P~~yVLKPQREGGGNNiYGedI~~~L~~l~~~~~~e~~aYILMe  491 (565)
                      ++ ++.+++||+||++|||||.+    +++++|+++|++||||||||||||||||+||+++|+++++  ++||++|||||
T Consensus       218 ~~~~~~~~~lr~tFa~ly~LD~~~~g~~a~~~a~~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~--~~e~~ayILMe  295 (370)
T d2hgsa4         218 PGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQLKD--SEERASYILME  295 (370)
T ss_dssp             TTCHHHHHHHHHTCCCEEECSSSHHHHHHHHHHHHSGGGEEEEESCCSSSCCBCHHHHHHHHHHHTT--SGGGGGEEEEE
T ss_pred             CCCHHHHHHHHHhhhcccccCCCccchHHHHHhHhCchhEEecccccCCcccccchHHHHHHHHcCC--hHhhhHHHHHH
Confidence            74 57899999999999999964    5789999999999999999999999999999999999964  34899999999


Q ss_pred             ccCCCCcceEEEecCc-cccccceeccceeEEEEecCcEEEeeccceEEEeecCCCCCCCceeeccccccccccC
Q 008446          492 RIFPSVSLTFLMRDGI-CHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVLDSLYLT  565 (565)
Q Consensus       492 rI~Pp~~~n~lvR~g~-~~~~~~vSELGIfG~~l~~~~~ii~N~~~GyLlRTK~~~s~EGGVaaG~g~LDS~~L~  565 (565)
                      ||+||+++|++||+|+ +..+++||||||||++++++++++.|+++|||||||++++||||||||||||||||||
T Consensus       296 rI~P~~~~~~~vr~g~~~~~~~~iSElGifG~~l~~~~~~~~N~~~G~LlRTK~~~~~EGGVaaG~g~lDSpylv  370 (370)
T d2hgsa4         296 KIEPEPFENCLLRPGSPARVVQCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV  370 (370)
T ss_dssp             CCCCCCEEEEEECTTSCCEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSSCCTTTTSCEEECCEEC
T ss_pred             hcCCCCcCceEEECCcceeeccccccccccEEEEeCCCEEEEeccceEEEecCCCCCCCCCeecceecccCcccC
Confidence            9999999999999987 5568999999999999999999999999999999999999999999999999999997

PyMOL of d2hgsa4

>d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1m0wa1 c.30.1.4 (A:216-323) Eukaryotic glutathione synthetase, substrate-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2hgsa1 c.30.1.4 (A:202-303) Eukaryotic glutathione synthetase, substrate-binding domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure