Citrus Sinensis ID: 008465

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560----
MTKFYEVTAQLEQALSAISYENLDISDEVKEQVELVLSQFRRAKGRVDAPDVELYEELLSLYNKNNDVTPDPAVLRGLAEKLQLMGIADLTQESLALHEMVASTGGDPGETIEKMSMLLKKIKDFVQTENPNLDAPLKEKNPGPSQGGQASSDRNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCPKTQQTLTSTAVTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTSSACSPAERTKIEILLCKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPSIVHVLRIGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQQYLAEAKELGVMGPLVDLAQNGTDRGKRKAAQLLERMSRFIEQQKQAQVQTESQSQIQEARLPSNAADS
cHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHcccccccHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccc
*TKFYEVTAQLEQALSAISYENLDISDEVKEQVELVLSQFRRAKGRVDAPDVELYEELLSLYNKNNDVTPDPAVLRGLAEKLQLMGIADLTQESLALHEM***************SMLLKKIKDFVQTENP****************************VIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCPKTQQTLTSTAVTPNYVLRSLIAQWCEANGI*************************IEILLCKLTSG*PEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPSIVHVLRIGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQQYLAEAKELGVMGPLVDLAQNGTDRGKRKAAQLLERMS*******************************
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MTKFYEVTAQLEQALSAISYENLDISDEVKEQVELVLSQFRRAKGRVDAPDVELYEELLSLYNKNNDVTPDPAVLRGLAEKLQLMGIADLTQESLALHEMVASTGGDPGETIEKMSMLLKKIKDFVQTENPNLDAPLKEKNPGPSQGGQASSDRNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCPKTQQTLTSTAVTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTSSACSPAERTKIEILLCKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEDNKGSIVSSGAVPSIVHVLRIGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQQYLAEAKELGVMGPLVDLAQNGTDRGKRKAAQLLERMSRFIEQQKQAQVQTESQSQIQEARLPSNAADS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
U-box domain-containing protein 13 Functions as an E3 ubiquitin ligase.confidentQ9SNC6
U-box domain-containing protein 12 Functions as an E3 ubiquitin ligase.probableQ9ZV31
E3 ubiquitin-protein ligase SPL11 E3 ubiquitin-protein ligase that negatively regulates programmed cell death and disease resistance. Participates in flowering time control by mediating ubiquitination and subsequent proteasomal degradation of SPIN1.probableQ0IMG9

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2Z6H, chain A
Confidence level:very confident
Coverage over the Query: 255-548
View the alignment between query and template
View the model in PyMOL
Template: 3M62, chain A
Confidence level:very confident
Coverage over the Query: 52-131,154-233
View the alignment between query and template
View the model in PyMOL
Template: 4EPO, chain C
Confidence level:probable
Coverage over the Query: 156-229
View the alignment between query and template
View the model in PyMOL