Citrus Sinensis ID: 008466

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560----
MATAVLPQDAKKLPRPGRGGFQAHGLTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccHHHHHHcccHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccEEccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHccccEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHcccEEEEECccccccccHHHHHHHHHHHHccccccccCEEEEEEEEEcccHHHHHHHccccccccHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEEEEcccEEEEEEEEcccccEEEEEcccccccccccccccccccccEEEEEEccccCEcccccccccHcccHHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHcccEEcccccccccc
*******************************RVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYL*
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MATAVLPQDAKKLPRPGRGGFQAHGLTEEEARVRAIAEIVNSMVELSRKNETVDLNAIKSAACRKYGLARAPKLVEMIAALPETDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMVKYLE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Elongator complex protein 3 Histone acetyltransferase. Part of the large multiprotein complex Elongator that is involved in the regulation of transcription initiation and elongation. May also have a methyltransferase activity.confidentQ7X7L3
Elongator complex protein 3 Histone acetyltransferase component of the large multiprotein complex Elongator that is involved in the regulation of transcription initiation and elongation. May also have a methyltransferase activity. Promotes organs development by modulating cell division rate. Required for auxin distribution or signaling. Involved in tRNA wobble uridine modification. Mediates the establishment of leaf polarity independently of AS2 and the ta-siRNA-related pathway.confidentQ93ZR1
Probable elongator complex protein 3 Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. Elongator may play a role in chromatin remodeling. May also have a methyltransferase activity.confidentQ23651

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.3.-.-Acyltransferases.probable
2.3.1.-Transferring groups other than amino-acyl groups.probable
2.3.1.48Histone acetyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1OLT, chain A
Confidence level:very confident
Coverage over the Query: 70-101,114-211,229-372,390-406
View the alignment between query and template
View the model in PyMOL
Template: 3T90, chain A
Confidence level:confident
Coverage over the Query: 452-564
View the alignment between query and template
View the model in PyMOL