Citrus Sinensis ID: 008499
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 563 | 2.2.26 [Sep-21-2011] | |||||||
| P44659 | 215 | Uncharacterized protein H | yes | no | 0.323 | 0.846 | 0.265 | 1e-13 | |
| Q8FTH8 | 739 | Thiamine biosynthesis mul | yes | no | 0.319 | 0.243 | 0.267 | 5e-11 | |
| O94266 | 551 | Putative hydroxymethylpyr | yes | no | 0.330 | 0.337 | 0.236 | 4e-09 | |
| Q9UUE0 | 274 | UPF0655 protein C17G9.12c | no | no | 0.463 | 0.952 | 0.240 | 6e-09 | |
| Q8NQH1 | 763 | Thiamine biosynthesis mul | yes | no | 0.365 | 0.269 | 0.262 | 2e-08 | |
| Q49Z42 | 229 | Putative thiaminase-2 OS= | yes | no | 0.332 | 0.816 | 0.233 | 2e-05 | |
| Q2YUL0 | 229 | Putative thiaminase-2 OS= | yes | no | 0.319 | 0.786 | 0.248 | 2e-05 | |
| Q6GEY1 | 229 | Putative thiaminase-2 OS= | yes | no | 0.326 | 0.803 | 0.241 | 2e-05 | |
| Q7A0C8 | 229 | Putative thiaminase-2 OS= | yes | no | 0.326 | 0.803 | 0.241 | 4e-05 | |
| Q6G7L6 | 229 | Putative thiaminase-2 OS= | yes | no | 0.326 | 0.803 | 0.241 | 4e-05 |
| >sp|P44659|Y358_HAEIN Uncharacterized protein HI_0358 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0358 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEEL 95
F LA G L F+HY+ QD+ +L +S+A+ L A + + + + + +E+
Sbjct: 21 FVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKAKNFAEMETPRKTLEILCQEI 80
Query: 96 KMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVA 153
++H ++ +EWG ++ T ++A + YT +LL G LA +
Sbjct: 81 QLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMT--------GSLAELY------ 126
Query: 154 AYTLGAMSPCMRLYA----FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDL 209
A++PC YA ++ + + L N+PY WID Y+SE FQ +A + D
Sbjct: 127 ----AAVTPCALGYAQVARYITQHYPRL-----PNNPYQTWIDTYASEEFQQAAQETVDF 177
Query: 210 LDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
L L L +L I++++ A ++E+ F+
Sbjct: 178 LTALCKPLNPSQLAEIQQIFTTATRMEIAFW 208
|
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) |
| >sp|Q8FTH8|THIED_COREF Thiamine biosynthesis multifunctional protein ThiED OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=thiED PE=3 SV=1 | Back alignment and function description |
|---|
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 34 SPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLS-ISELRKGVL 92
S F L G L E F YI QD H+L+ +S+A A D A++ + + +
Sbjct: 545 SGFIRGLGDGTLSREEFLFYIDQDAHYLRQYSRALATLSSRAPDAPAQVDWATSAAECIT 604
Query: 93 EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKV 152
E ++H +++ + G ++ + T+ YT+FL+A ++
Sbjct: 605 VEAELHRTYLNK-GLAETGVSAPSPVTMAYTDFLIA--------------------RSHA 643
Query: 153 AAYTLGAMS--PCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLL 210
Y +GA + PC LYA +G L N HPYT W+D YS E F A ++ +
Sbjct: 644 DDYVVGAAAVLPCYWLYAEIGL---ILAKQNHPEHPYTDWLDTYSGEGFLAGTVKA---I 697
Query: 211 DKLSVSLTGEELD---IIEKLYHQAMKLEVEFF 240
++ ++ G D + + Y A E EFF
Sbjct: 698 ARVEAAMAGAGPDQQRVAAQTYLSACVHEREFF 730
|
Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P. Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) (taxid: 196164) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 7 |
| >sp|O94266|THI22_SCHPO Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.18c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEEL 95
FT LA G L L F+ Y+ QD+ +L F++AY L + L ++ V+EE
Sbjct: 345 FTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYSLKGYKENTFPNILEAAQSVIHVIEEK 404
Query: 96 KMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVA 153
++H S +G L + + + A Y+ ++L T + + VA
Sbjct: 405 ELHVSMCSSYGVSLQDLKSCEESPACTAYSRYILDTGAAQ-----------------DVA 447
Query: 154 AYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKL 213
A +PC+ Y + N PY KW+DNY E + ++ + ++++
Sbjct: 448 ALDF-VQAPCLIGYYVIAARLMKEPFRNPQG-PYQKWVDNYFCEDYLSAVRRGCRQIEEI 505
Query: 214 SVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ L+ E + + +++ +A K E F+
Sbjct: 506 VLKLSPERIQELIEIFIRATKFETLFW 532
|
Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 7 |
| >sp|Q9UUE0|YNZC_SCHPO UPF0655 protein C17G9.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC17G9.12c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 127/312 (40%), Gaps = 51/312 (16%)
Query: 264 LIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYT 323
++ DFD T T D+ +LAE N+PE W ++S +Y
Sbjct: 1 MLYIVDFDETITTYDTIHLLAEAV---------NKPEE-------------WSVISDKYW 38
Query: 324 EEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG 383
+EY E+ S + ++ L + E+ + R+ +S G++ +
Sbjct: 39 QEYLAWREALPHSTTLTSY-----LPLLGGSRYLEEASIKRIEKSQYFSGLSEGALDNIV 93
Query: 384 ERLSLQDGCTTFFQKVVKNENLNANV-HVLSYCWCGDLIRASF--SSGLNA--LNVHANE 438
+ ++L+ G F +V + ++ + HVLS W +I + + L A L VHAN+
Sbjct: 94 QLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHAND 153
Query: 439 FSFKESIST--GEIIEKVESPI-----DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 491
F F S +T G I+ + S + DKV+ F ++ VYIGDS D C
Sbjct: 154 FDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGC 213
Query: 492 LLEADIGIVIGSSSSLRRVGSQF-GVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTV 550
L + I I++ S+ + S+F V + + V+K I+YT
Sbjct: 214 LQISPISILMRSNQKYYDILSRFEDVQLVDISEFPVQKA-----------VPGKKIIYTC 262
Query: 551 SSWAEVHAFILG 562
S W + L
Sbjct: 263 SDWCAIQKAFLA 274
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q8NQH1|THIED_CORGL Thiamine biosynthesis multifunctional protein ThiED OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=theD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 34/240 (14%)
Query: 7 KSPSPEEEG---LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKA 63
KSP+P E R LW S F L G L+ F YI QD +L
Sbjct: 538 KSPAPRIEPAGPFTRALWEASGDIIAGINSSDFITMLGDGTLRRPEFDFYIDQDAQYLAQ 597
Query: 64 FSQAYELAEECADDDDAKLSISE-LRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKY 122
+S+A A D A++ ++ + ++ E ++H S++ G +++ + + T+ Y
Sbjct: 598 YSRALARLSSIAPDSHAQIEWAQSAAECLVVEAELHRSYMA--GKEVSAPSHI---TMAY 652
Query: 123 TEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLG--AMSPCMRLYAFLGKEFHALLNA 180
T+FL+A +T Y G A+ PC LYA +G L
Sbjct: 653 TDFLIA--------------------RTYTEDYVCGVAAVLPCYWLYAEIGL---MLAEQ 689
Query: 181 NEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
N HPY W++ YS E F A L+K + E+ + + A E EFF
Sbjct: 690 NHDEHPYKDWLNTYSGEEFIAGTRAAIARLEKALENAGAEQRVDAARAFLSASVHEREFF 749
|
Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P. Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 7 |
| >sp|Q49Z42|TENA_STAS1 Putative thiaminase-2 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=tenA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 33 YSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYEL-AEECADDDDAKLSISELRKGV 91
+ PF + GNL E + Y+ D +L F+ Y L + + +D + + +++ V
Sbjct: 20 HDPFIQGMLHGNLPTEATKFYLRADASYLNEFANIYALLIPKMGNLNDVRFLVEQIQFIV 79
Query: 92 LEELKMHD---SFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
E++ H+ +V+E ++ + + Y + + A K
Sbjct: 80 DGEVEAHEILADYVQESYNEIVQEKVWPPSGDHYIKHMYFNAYAK--------------- 124
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHP--YTKWIDNYSSESFQASALQN 206
+ AAYT+ AM+PC +Y F+ +E L E N KW + YS+E +
Sbjct: 125 --ENAAYTIAAMAPCPYVYQFIAQE---ALRDKELNKDSILAKWFEFYSTE-MDELVIVF 178
Query: 207 EDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++L+DKL+ + +E + I++ + Q+ E FF
Sbjct: 179 DNLMDKLTKHCSEKEKNEIKQCFLQSTVHERNFF 212
|
Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
| >sp|Q2YUL0|TENA_STAAB Putative thiaminase-2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=tenA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 43 GNLKLETFRHYIAQDFHFLKAFSQAYEL-AEECADDDDAKLSISELRKGVLEELKMHDSF 101
GN++ + RHY+ D +LK F+ Y L + +D K + ++ V E+ HD
Sbjct: 30 GNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDI- 88
Query: 102 VKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMS 161
LA++ + + T+F + ++ + + A YT+ AM+
Sbjct: 89 -------LAQIVGESYEEIINTKFWPPSGDHYIKHMYFQA------HSRENAIYTIAAMA 135
Query: 162 PCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLLDKLSVSLTG 219
PC +YA L K + N KW D YS+E + N E L++KL+ S++
Sbjct: 136 PCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALMNKLAESMSD 191
Query: 220 EELDIIEKLYHQAMKLEVEFF 240
+EL+ +++++ ++ E FF
Sbjct: 192 KELEQVKQVFLESCIHERRFF 212
|
Staphylococcus aureus (strain bovine RF122 / ET3-1) (taxid: 273036) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
| >sp|Q6GEY1|TENA_STAAR Putative thiaminase-2 OS=Staphylococcus aureus (strain MRSA252) GN=tenA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYE-LAEECADDDDAKLSISELRKGVLEE 94
F + GN++ + RHY+ D +LK F+ Y L + +D K + ++ V E
Sbjct: 23 FIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Query: 95 LKMHD---SFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
+ HD V E ++ K + Y + + A + +
Sbjct: 83 VLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSRENAI-------------- 128
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDL 209
YT+ AM+PC +YA L K + N KW D YS+E + N E L
Sbjct: 129 ---YTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFESL 181
Query: 210 LDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 182 MNKLAESMSDKELEQVKQVFLESCIHERRFF 212
|
Staphylococcus aureus (strain MRSA252) (taxid: 282458) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
| >sp|Q7A0C8|TENA_STAAW Putative thiaminase-2 OS=Staphylococcus aureus (strain MW2) GN=tenA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYE-LAEECADDDDAKLSISELRKGVLEE 94
F + SG++ + RHY+ D +LK F+ Y L + +D K + ++ V E
Sbjct: 23 FIQKMLSGDIGADALRHYLKADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Query: 95 LKMHD---SFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
+ HD V E ++ K + Y + + A + +
Sbjct: 83 VLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSRENAI-------------- 128
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDL 209
YT+ AM+PC +YA L K + N KW D YS+E + N E L
Sbjct: 129 ---YTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEAL 181
Query: 210 LDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 182 MNKLAESMSDKELEQVKQVFLESCIHERRFF 212
|
Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
| >sp|Q6G7L6|TENA_STAAS Putative thiaminase-2 OS=Staphylococcus aureus (strain MSSA476) GN=tenA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYE-LAEECADDDDAKLSISELRKGVLEE 94
F + SG++ + RHY+ D +LK F+ Y L + +D K + ++ V E
Sbjct: 23 FIQKMLSGDIGADALRHYLKADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Query: 95 LKMHD---SFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
+ HD V E ++ K + Y + + A + +
Sbjct: 83 VLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSRENAI-------------- 128
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDL 209
YT+ AM+PC +YA L K + N KW D YS+E + N E L
Sbjct: 129 ---YTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEAL 181
Query: 210 LDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 182 MNKLAESMSDKELEQVKQVFLESCIHERRFF 212
|
Staphylococcus aureus (strain MSSA476) (taxid: 282459) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 563 | ||||||
| 225466287 | 566 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.994 | 0.793 | 0.0 | |
| 296088278 | 657 | unnamed protein product [Vitis vinifera] | 1.0 | 0.856 | 0.793 | 0.0 | |
| 118486577 | 618 | unknown [Populus trichocarpa] | 0.992 | 0.904 | 0.767 | 0.0 | |
| 356576723 | 607 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.906 | 0.780 | 0.0 | |
| 224125750 | 577 | predicted protein [Populus trichocarpa] | 0.976 | 0.953 | 0.782 | 0.0 | |
| 356535194 | 604 | PREDICTED: uncharacterized protein LOC10 | 0.998 | 0.930 | 0.765 | 0.0 | |
| 224145849 | 541 | predicted protein [Populus trichocarpa] | 0.928 | 0.966 | 0.759 | 0.0 | |
| 297805028 | 617 | hypothetical protein ARALYDRAFT_915614 [ | 0.984 | 0.897 | 0.709 | 0.0 | |
| 145358529 | 617 | heme oxygenase-like, multi-helical prote | 0.978 | 0.893 | 0.712 | 0.0 | |
| 110737432 | 629 | hypothetical protein [Arabidopsis thalia | 0.978 | 0.875 | 0.712 | 0.0 |
| >gi|225466287|ref|XP_002270291.1| PREDICTED: uncharacterized protein LOC100266835 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/566 (79%), Positives = 506/566 (89%), Gaps = 3/566 (0%)
Query: 1 MAAIPPKSPSP--EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDF 58
MAAIP S + EEG+ARR WIKF++ES+FAMY+PF VCLASGNLKL++FRH+IAQD
Sbjct: 1 MAAIPKPSITTVDNEEGIARRFWIKFRKESIFAMYTPFVVCLASGNLKLDSFRHFIAQDV 60
Query: 59 HFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSA 118
HFL+AF+QAYELAEECADDDDAKL I +LRK VLEELKMHDSFVKEWG DL+K +++NSA
Sbjct: 61 HFLRAFAQAYELAEECADDDDAKLGICQLRKSVLEELKMHDSFVKEWGFDLSKESSLNSA 120
Query: 119 TVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178
TVKY +FLLATASGK+EGVKGPGKLATPFEKTKVAAYTLGAM+PCMRLYAFLGKE ALL
Sbjct: 121 TVKYRDFLLATASGKIEGVKGPGKLATPFEKTKVAAYTLGAMTPCMRLYAFLGKELQALL 180
Query: 179 NANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVE 238
+ +E HPY KWIDNYSSE FQ SALQ EDLLDKLSVSLTGEELDIIEKLY+QAMKLE+E
Sbjct: 181 HPSESTHPYKKWIDNYSSEGFQGSALQTEDLLDKLSVSLTGEELDIIEKLYYQAMKLEIE 240
Query: 239 FFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQ 298
FFCAQ L Q T+VPL KGH+PA DRL+IFSDFDLTCT+VDSSAILAEIAI+TAPK DQNQ
Sbjct: 241 FFCAQLLDQYTIVPLTKGHDPAADRLVIFSDFDLTCTVVDSSAILAEIAIITAPKFDQNQ 300
Query: 299 PENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFE 358
PENQ+ RMSS +LRNTWG+LSKQYTEEYEQCIE+ +PSEKVE F+YE L KALEQLS FE
Sbjct: 301 PENQIIRMSSADLRNTWGVLSKQYTEEYEQCIENILPSEKVEEFDYEGLCKALEQLSDFE 360
Query: 359 KRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418
KRANSRVIESGVLKG+NL+DIK+AGERL LQDGC +FFQ +VKNE+L A+VH+LSYCWCG
Sbjct: 361 KRANSRVIESGVLKGLNLDDIKRAGERLILQDGCASFFQNIVKNESLIADVHILSYCWCG 420
Query: 419 DLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN 477
DLIR++FSS GL+ LNVHANEF+FKESIS GEI++ VESPIDK++AF N LE DRKN
Sbjct: 421 DLIRSAFSSGGLHVLNVHANEFAFKESISNGEIVKNVESPIDKLKAFLNILENCSNDRKN 480
Query: 478 LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSS 537
L+VYIGDSVGDLLCLL AD+GIVIGSSSSL+RVGSQFGV+F+PL+ LVKKQKEY EGSS
Sbjct: 481 LTVYIGDSVGDLLCLLNADVGIVIGSSSSLKRVGSQFGVSFVPLFRFLVKKQKEYVEGSS 540
Query: 538 SNWKEKSGILYTVSSWAEVHAFILGW 563
S WK SG LYTVSSWAE+HAFILGW
Sbjct: 541 SRWKGLSGTLYTVSSWAEIHAFILGW 566
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296088278|emb|CBI36504.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/566 (79%), Positives = 506/566 (89%), Gaps = 3/566 (0%)
Query: 1 MAAIPPKSPSP--EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDF 58
MAAIP S + EEG+ARR WIKF++ES+FAMY+PF VCLASGNLKL++FRH+IAQD
Sbjct: 92 MAAIPKPSITTVDNEEGIARRFWIKFRKESIFAMYTPFVVCLASGNLKLDSFRHFIAQDV 151
Query: 59 HFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSA 118
HFL+AF+QAYELAEECADDDDAKL I +LRK VLEELKMHDSFVKEWG DL+K +++NSA
Sbjct: 152 HFLRAFAQAYELAEECADDDDAKLGICQLRKSVLEELKMHDSFVKEWGFDLSKESSLNSA 211
Query: 119 TVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178
TVKY +FLLATASGK+EGVKGPGKLATPFEKTKVAAYTLGAM+PCMRLYAFLGKE ALL
Sbjct: 212 TVKYRDFLLATASGKIEGVKGPGKLATPFEKTKVAAYTLGAMTPCMRLYAFLGKELQALL 271
Query: 179 NANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVE 238
+ +E HPY KWIDNYSSE FQ SALQ EDLLDKLSVSLTGEELDIIEKLY+QAMKLE+E
Sbjct: 272 HPSESTHPYKKWIDNYSSEGFQGSALQTEDLLDKLSVSLTGEELDIIEKLYYQAMKLEIE 331
Query: 239 FFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQ 298
FFCAQ L Q T+VPL KGH+PA DRL+IFSDFDLTCT+VDSSAILAEIAI+TAPK DQNQ
Sbjct: 332 FFCAQLLDQYTIVPLTKGHDPAADRLVIFSDFDLTCTVVDSSAILAEIAIITAPKFDQNQ 391
Query: 299 PENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFE 358
PENQ+ RMSS +LRNTWG+LSKQYTEEYEQCIE+ +PSEKVE F+YE L KALEQLS FE
Sbjct: 392 PENQIIRMSSADLRNTWGVLSKQYTEEYEQCIENILPSEKVEEFDYEGLCKALEQLSDFE 451
Query: 359 KRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418
KRANSRVIESGVLKG+NL+DIK+AGERL LQDGC +FFQ +VKNE+L A+VH+LSYCWCG
Sbjct: 452 KRANSRVIESGVLKGLNLDDIKRAGERLILQDGCASFFQNIVKNESLIADVHILSYCWCG 511
Query: 419 DLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN 477
DLIR++FSS GL+ LNVHANEF+FKESIS GEI++ VESPIDK++AF N LE DRKN
Sbjct: 512 DLIRSAFSSGGLHVLNVHANEFAFKESISNGEIVKNVESPIDKLKAFLNILENCSNDRKN 571
Query: 478 LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSS 537
L+VYIGDSVGDLLCLL AD+GIVIGSSSSL+RVGSQFGV+F+PL+ LVKKQKEY EGSS
Sbjct: 572 LTVYIGDSVGDLLCLLNADVGIVIGSSSSLKRVGSQFGVSFVPLFRFLVKKQKEYVEGSS 631
Query: 538 SNWKEKSGILYTVSSWAEVHAFILGW 563
S WK SG LYTVSSWAE+HAFILGW
Sbjct: 632 SRWKGLSGTLYTVSSWAEIHAFILGW 657
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118486577|gb|ABK95127.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/576 (76%), Positives = 504/576 (87%), Gaps = 17/576 (2%)
Query: 3 AIPPKS----PSPE----------EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLE 48
AIPP+S PS EEGLA + WIKF+RESVFAMY+PF + LASG LK++
Sbjct: 45 AIPPRSIASAPSCTTTSGRSNINIEEGLASKFWIKFRRESVFAMYTPFVISLASGTLKID 104
Query: 49 TFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTD 108
+FRHYI+QD HFLK+F+ A+ELAEECADDD+AKL+ISELRKGVLEELKMH+SFV+EWG D
Sbjct: 105 SFRHYISQDSHFLKSFAHAFELAEECADDDEAKLAISELRKGVLEELKMHNSFVQEWGID 164
Query: 109 LAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168
K T+NSATVKYT+FLLATASGKVEGVKG GKLATPFE+TKVAAYTLGAM+PCMRLY+
Sbjct: 165 PGKEGTINSATVKYTDFLLATASGKVEGVKGLGKLATPFERTKVAAYTLGAMTPCMRLYS 224
Query: 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKL 228
FLGKE A+L+ E HPY KWID+YSSESFQASALQ EDLLDKLSVSLTGEELDIIEKL
Sbjct: 225 FLGKELQAVLDPEEDGHPYKKWIDSYSSESFQASALQTEDLLDKLSVSLTGEELDIIEKL 284
Query: 229 YHQAMKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAI 288
YHQAMKLE+EFF AQP+AQ T+ PL KGHNP DRL+IFSDFDLTCT+VDSSAILAEIAI
Sbjct: 285 YHQAMKLEIEFFLAQPIAQTTLAPLTKGHNPEEDRLVIFSDFDLTCTVVDSSAILAEIAI 344
Query: 289 VTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLH 348
+TAPKSD QPE Q+ RMSS +LRNTWGLLS QYTEEYEQCIES MPS KVE FNYE L
Sbjct: 345 LTAPKSDVVQPETQIARMSSADLRNTWGLLSGQYTEEYEQCIESIMPSAKVE-FNYEALC 403
Query: 349 KALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNAN 408
KALEQLS FE+RANSRVI+SGVLKG+NLED+K+AGERL LQDGC FFQK+VKNENLN N
Sbjct: 404 KALEQLSDFERRANSRVIDSGVLKGLNLEDVKRAGERLILQDGCIGFFQKIVKNENLNTN 463
Query: 409 VHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNT 467
VHVLSYCWCGDLIR++FSS GL+ALN+HANE F+ESISTGEI++KVESP+DK QAFN+
Sbjct: 464 VHVLSYCWCGDLIRSAFSSGGLDALNIHANELIFEESISTGEIVKKVESPMDKAQAFNDI 523
Query: 468 LEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVK 527
L+ Y +DRKNL+VYIGDSVGDLLCLL+ADIGIV+GSS+SLR VGSQ+GV+F+PL+PGLV+
Sbjct: 524 LKNYSSDRKNLTVYIGDSVGDLLCLLQADIGIVVGSSASLRSVGSQYGVSFVPLFPGLVR 583
Query: 528 KQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFILGW 563
KQKE ++G S NWK SGILYTVSSW+E+HAFILGW
Sbjct: 584 KQKE-SDGESPNWKGLSGILYTVSSWSEIHAFILGW 618
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356576723|ref|XP_003556479.1| PREDICTED: uncharacterized protein LOC100813450 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/551 (78%), Positives = 488/551 (88%), Gaps = 1/551 (0%)
Query: 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAE 72
E GLARR WIKF RES+FAMY+PF + LASGNL +++F YIAQD HFL+AF+QAYELAE
Sbjct: 56 ETGLARRFWIKFTRESIFAMYTPFVIALASGNLHIDSFHRYIAQDVHFLRAFAQAYELAE 115
Query: 73 ECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASG 132
ECADDDDAKL I ELRK VLEELKMH+S V+EWG DLAK +NSATVKYTEFLLATASG
Sbjct: 116 ECADDDDAKLGICELRKAVLEELKMHNSLVQEWGLDLAKEHGINSATVKYTEFLLATASG 175
Query: 133 KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWID 192
K+EG+KGPGKLATPFEKTK+AAYTLGAM+PCMRLYA LGK+F LL++NE HPY KWID
Sbjct: 176 KIEGLKGPGKLATPFEKTKIAAYTLGAMTPCMRLYAVLGKKFQELLDSNESTHPYNKWID 235
Query: 193 NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVP 252
NYSS+ FQA+ LQ EDLLDKLSVSLTGEELD+IEKLY+QAMKLE++FF AQPL QPT+VP
Sbjct: 236 NYSSDGFQATTLQTEDLLDKLSVSLTGEELDVIEKLYYQAMKLEIDFFSAQPLFQPTIVP 295
Query: 253 LIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELR 312
L KGH PA D LI+FSDFDLTCT+VDSSAILAEIAIVTAPKSDQNQPE+Q+ RM S +LR
Sbjct: 296 LTKGHKPAEDHLIVFSDFDLTCTVVDSSAILAEIAIVTAPKSDQNQPEDQIVRMLSSDLR 355
Query: 313 NTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLK 372
NTWG LSKQYTEEYEQCIES MPS+++ NF+Y+ L ALEQLS FE AN+RVIESGVLK
Sbjct: 356 NTWGFLSKQYTEEYEQCIESIMPSDRLNNFDYKELSMALEQLSKFENTANNRVIESGVLK 415
Query: 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSG-LNA 431
GI+LEDIK+AGERL LQDGCT FFQ +VKNENLN+NVHVLSYCWCGDLIR++FSS LN
Sbjct: 416 GISLEDIKRAGERLILQDGCTNFFQSIVKNENLNSNVHVLSYCWCGDLIRSAFSSADLNE 475
Query: 432 LNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 491
LNVHANEF+++ S+STGEI++KVESPIDKV+AF N L+ D+K L+VYIGDSVGDLLC
Sbjct: 476 LNVHANEFTYEGSVSTGEIVKKVESPIDKVEAFRNILKNCNDDKKKLTVYIGDSVGDLLC 535
Query: 492 LLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVS 551
LLEAD+GIVIGSSSSLR VG+QFG++F+PLY GLVKKQKEY EGS+SNWK SGILYTVS
Sbjct: 536 LLEADVGIVIGSSSSLRSVGTQFGISFVPLYSGLVKKQKEYVEGSTSNWKGLSGILYTVS 595
Query: 552 SWAEVHAFILG 562
SWAEVHAFILG
Sbjct: 596 SWAEVHAFILG 606
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125750|ref|XP_002319666.1| predicted protein [Populus trichocarpa] gi|222858042|gb|EEE95589.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/551 (78%), Positives = 486/551 (88%), Gaps = 1/551 (0%)
Query: 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAE 72
EEGLA + WIKF+RESVF+MY+PF + LASG LK+++FR Y++QD HFLK+F+ A+ELAE
Sbjct: 28 EEGLASKFWIKFRRESVFSMYTPFIISLASGTLKIDSFRQYLSQDSHFLKSFAHAFELAE 87
Query: 73 ECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASG 132
ECADDD+AKL+ SELRKGVLEELKM +SFV+EWGTD K TVNSATVKYT+FLLATASG
Sbjct: 88 ECADDDEAKLATSELRKGVLEELKMQNSFVQEWGTDPGKERTVNSATVKYTDFLLATASG 147
Query: 133 KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWID 192
KVEGVKGPGKLATPFE+TKVAAYTL AM+PCMRLY+FLGKE ALL+ + HPY KWID
Sbjct: 148 KVEGVKGPGKLATPFERTKVAAYTLAAMTPCMRLYSFLGKELQALLDPEDDRHPYKKWID 207
Query: 193 NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVP 252
+YSSESFQASALQ EDLLDKLSVSLT EELDIIEKLYHQAMKLE++FF AQPLAQPTV P
Sbjct: 208 SYSSESFQASALQTEDLLDKLSVSLTSEELDIIEKLYHQAMKLEIDFFLAQPLAQPTVAP 267
Query: 253 LIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELR 312
L KGHNPA DRL+IFSDFDLTCT+VDSSAILAEIAIVTAPKSD Q E Q+ RMSS +LR
Sbjct: 268 LTKGHNPAEDRLVIFSDFDLTCTVVDSSAILAEIAIVTAPKSDVVQSEAQIARMSSADLR 327
Query: 313 NTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLK 372
NTW LLS QYTEEYEQCIES MPS+KVE FNYE L KALEQL FE+R NSRVIES VLK
Sbjct: 328 NTWDLLSGQYTEEYEQCIESIMPSKKVE-FNYEALCKALEQLLDFERRVNSRVIESEVLK 386
Query: 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNAL 432
G+NLED+K+AGERL LQDGCT+FFQK+V NENLN NVHVLSYCWCGDLIR++FSSG +
Sbjct: 387 GLNLEDVKRAGERLILQDGCTSFFQKIVNNENLNTNVHVLSYCWCGDLIRSAFSSGGLDV 446
Query: 433 NVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL 492
NVHANE F ESISTGEI++KVESP+DK QAFN+ L+ Y DRKNL+VYIGDSVGDLLCL
Sbjct: 447 NVHANELIFDESISTGEIVKKVESPLDKAQAFNDILKNYSNDRKNLTVYIGDSVGDLLCL 506
Query: 493 LEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSS 552
L+ADIGIV+GSS+SLR+VGSQFGV+F+PL+PGLV+KQKE SS NWK SGILYTVSS
Sbjct: 507 LKADIGIVVGSSASLRKVGSQFGVSFVPLFPGLVRKQKESDGESSPNWKGLSGILYTVSS 566
Query: 553 WAEVHAFILGW 563
WAE+HAFILGW
Sbjct: 567 WAEIHAFILGW 577
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535194|ref|XP_003536133.1| PREDICTED: uncharacterized protein LOC100788250 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/563 (76%), Positives = 489/563 (86%), Gaps = 1/563 (0%)
Query: 1 MAAIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHF 60
MAAI S S E GLARR WIKF RES+FAMY+PF + LASGNL +++F HYIAQD HF
Sbjct: 41 MAAIHNHSNSNSETGLARRFWIKFTRESIFAMYTPFAIALASGNLHIDSFHHYIAQDVHF 100
Query: 61 LKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATV 120
L+AF+QAYELAEECADDDDAKL I ELRK VLEELKMH+ V+E DLAK +NSATV
Sbjct: 101 LRAFAQAYELAEECADDDDAKLGICELRKAVLEELKMHNLLVQERELDLAKEHGINSATV 160
Query: 121 KYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNA 180
KYTEFLLATASGK+EG+KGPGKLATPFEKTK+AAYTLGAM+PCMRLYA +GK+F LL++
Sbjct: 161 KYTEFLLATASGKIEGLKGPGKLATPFEKTKIAAYTLGAMTPCMRLYAVMGKKFQELLDS 220
Query: 181 NEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
NE HPY KWI+NYSS+ FQA+ LQ EDLLDKLSVSLTGEELD+IEKLY+QAMKLE+EFF
Sbjct: 221 NESTHPYNKWINNYSSDGFQATTLQTEDLLDKLSVSLTGEELDVIEKLYYQAMKLEIEFF 280
Query: 241 CAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPE 300
AQPL QPT+VPL KGH P D LIIFSDFDLTCT+VDSSAILAEIAIVTAPKSDQNQPE
Sbjct: 281 SAQPLFQPTIVPLTKGHKPVEDHLIIFSDFDLTCTVVDSSAILAEIAIVTAPKSDQNQPE 340
Query: 301 NQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKR 360
+Q+ RM S +LRNTWG LSKQYTEEYEQCIES MP +++ NF+Y+ L ALEQLS FE
Sbjct: 341 DQIVRMLSSDLRNTWGFLSKQYTEEYEQCIESIMPPDRLNNFDYKELSMALEQLSKFENT 400
Query: 361 ANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420
AN+RVIESGVLKGI+LEDIK+AGERL LQDGC FFQ +VKNENLNANVHVLSYCWCGDL
Sbjct: 401 ANNRVIESGVLKGISLEDIKRAGERLILQDGCPNFFQSIVKNENLNANVHVLSYCWCGDL 460
Query: 421 IRASFSSG-LNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLS 479
IR++FSS LN LNVHANEF+++ S+STGEI++KVESPIDKV+AF N L+ D+K L+
Sbjct: 461 IRSTFSSADLNELNVHANEFTYEGSVSTGEIVKKVESPIDKVEAFRNILKNCNDDKKKLT 520
Query: 480 VYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSN 539
VYIGDSVGDLLCLLEAD+GIVIGSSSSLR VG+QFG++F+PLY GLVKKQKEY EGS+S+
Sbjct: 521 VYIGDSVGDLLCLLEADVGIVIGSSSSLRSVGTQFGISFVPLYSGLVKKQKEYVEGSTSD 580
Query: 540 WKEKSGILYTVSSWAEVHAFILG 562
WK SGILYTVSSWAEVHAFILG
Sbjct: 581 WKGLSGILYTVSSWAEVHAFILG 603
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145849|ref|XP_002325785.1| predicted protein [Populus trichocarpa] gi|222862660|gb|EEF00167.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/552 (75%), Positives = 474/552 (85%), Gaps = 29/552 (5%)
Query: 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAE 72
EEGLA + WIKF+RESVFAMY+PF + LASG LK+++FRHYI+QD HFLK+F+ A+ELAE
Sbjct: 18 EEGLASKFWIKFRRESVFAMYTPFVISLASGTLKIDSFRHYISQDSHFLKSFAHAFELAE 77
Query: 73 ECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASG 132
ECADDD+AKL+ISELRKGVLEELKMH+SFV+EWG D K T+NSATVKYT+FLLATASG
Sbjct: 78 ECADDDEAKLAISELRKGVLEELKMHNSFVQEWGIDPGKEGTINSATVKYTDFLLATASG 137
Query: 133 KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWID 192
KVEGVKG GKLATPFE+TKVAAYTLGAM+PCMRLY+FLGKE A+L+ E HPY KWID
Sbjct: 138 KVEGVKGLGKLATPFERTKVAAYTLGAMTPCMRLYSFLGKELQAVLDPEEDGHPYKKWID 197
Query: 193 NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVP 252
+YSSESFQASALQ EDLLDKLSVSLTGEELDIIEKLYHQAMKLE+EFF AQP+AQ T+ P
Sbjct: 198 SYSSESFQASALQTEDLLDKLSVSLTGEELDIIEKLYHQAMKLEIEFFLAQPIAQTTLAP 257
Query: 253 LIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELR 312
L KGHNP DRL+IFSDFDLTCT+VDSSAILAEIAI+TAPKSD QPE Q+ RMSS +LR
Sbjct: 258 LTKGHNPEEDRLVIFSDFDLTCTVVDSSAILAEIAILTAPKSDVVQPETQIARMSSADLR 317
Query: 313 NTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLK 372
NTWGLLS QYTEEYEQCIES MPS KVE FNYE L KALEQLS FE+RANSRVI+SGVLK
Sbjct: 318 NTWGLLSGQYTEEYEQCIESIMPSAKVE-FNYEALCKALEQLSDFERRANSRVIDSGVLK 376
Query: 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA 431
G+NLED+K+AGERL LQDGC FFQK+VKNENLN NVHVLSYCWCGDLIR++FSS GL+A
Sbjct: 377 GLNLEDVKRAGERLILQDGCIGFFQKIVKNENLNTNVHVLSYCWCGDLIRSAFSSGGLDA 436
Query: 432 LNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 491
LN+HANE F+ESISTGEI NL+VYIGDSVGDLLC
Sbjct: 437 LNIHANELIFEESISTGEI--------------------------NLTVYIGDSVGDLLC 470
Query: 492 LLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVS 551
LL+ADIGIV+GSS+SLR VGSQ+GV+F+PL+PGLV+KQKE ++G S NWK SGILYTVS
Sbjct: 471 LLQADIGIVVGSSASLRSVGSQYGVSFVPLFPGLVRKQKE-SDGESPNWKGLSGILYTVS 529
Query: 552 SWAEVHAFILGW 563
SW+E+HAFILGW
Sbjct: 530 SWSEIHAFILGW 541
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297805028|ref|XP_002870398.1| hypothetical protein ARALYDRAFT_915614 [Arabidopsis lyrata subsp. lyrata] gi|297316234|gb|EFH46657.1| hypothetical protein ARALYDRAFT_915614 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/565 (70%), Positives = 472/565 (83%), Gaps = 11/565 (1%)
Query: 4 IPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKA 63
IPP S E+ L +LWIKF RE +F++YSPF VCLA+GNLK++TFR YIAQD HFLKA
Sbjct: 58 IPPNS----EDALPGKLWIKFNRECLFSIYSPFAVCLAAGNLKIDTFRQYIAQDVHFLKA 113
Query: 64 FSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYT 123
F+ AYELA ECADDDD KL+IS+LRK V+EELKMH+SFV++W D+ K +VNSAT++YT
Sbjct: 114 FAHAYELAAECADDDDDKLAISDLRKSVMEELKMHNSFVQDWDLDINKEVSVNSATLRYT 173
Query: 124 EFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEG 183
EFLLATASGKVEG K PG L TPFEKTKVAAYTLGA++PCMRLYAFLGKEF ALL+ ++
Sbjct: 174 EFLLATASGKVEGCKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGALLDLSDV 233
Query: 184 NHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243
HPY KWIDNYSS++FQASA Q EDLL+KLSVS+TGEELDIIEKLY QAMKLEVEFF AQ
Sbjct: 234 THPYKKWIDNYSSDAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHAQ 293
Query: 244 PLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQL 303
PL QPT+VPL+K N + D L+IFSDFDLTCT+VDSSAILAEIAIVTAPK +Q++ Q+
Sbjct: 294 PLVQPTIVPLVK--NRSKDDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQI 351
Query: 304 GRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANS 363
RM S +L+NTW LLSKQYTE YE+CIE+ + EK + F+YE L KALEQLS FEK AN+
Sbjct: 352 QRMLSSDLKNTWNLLSKQYTEHYEECIENILNKEKADKFDYEGLCKALEQLSDFEKEANN 411
Query: 364 RVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 423
RVIESGVLKG+NLEDIK+AGERL LQDGC FQK++K ENLNA +HVLSYCWCGDLIRA
Sbjct: 412 RVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIRA 471
Query: 424 SF-SSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN---LS 479
+F + G++A+ VHANEF+F+ESISTGEI KVESPI+K Q F + L+ + K LS
Sbjct: 472 AFCAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQNRKDENKKKSFLS 531
Query: 480 VYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYT-EGSSS 538
VYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+KQK++T E SSS
Sbjct: 532 VYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTEEESSS 591
Query: 539 NWKEKSGILYTVSSWAEVHAFILGW 563
WK SG LYTVSSWAE+H+F LGW
Sbjct: 592 TWKGLSGTLYTVSSWAEIHSFALGW 616
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145358529|ref|NP_198287.3| heme oxygenase-like, multi-helical protein [Arabidopsis thaliana] gi|332006501|gb|AED93884.1| heme oxygenase-like, multi-helical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/570 (71%), Positives = 479/570 (84%), Gaps = 19/570 (3%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
+IPP S EE L +LWIKF RE +F++YSPF VCLA+GNLK++TFR YIAQD HFLK
Sbjct: 57 SIPPTS----EEALPGKLWIKFNRECLFSIYSPFAVCLAAGNLKIDTFRQYIAQDVHFLK 112
Query: 63 AFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKY 122
AF+ AYELA +CADDDD KL+IS+LRK V+EELKMHDSFV++W D+ K +VNSAT++Y
Sbjct: 113 AFAHAYELAADCADDDDDKLAISDLRKSVMEELKMHDSFVQDWDLDINKEVSVNSATLRY 172
Query: 123 TEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANE 182
TEFLLATASGKVEG K PG L TPFEKTKVAAYTLGA++PCMRLYAFLGKEF +LL+ ++
Sbjct: 173 TEFLLATASGKVEGCKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGSLLDLSD 232
Query: 183 GNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242
NHPY KWIDNYSS++FQASA Q EDLL+KLSVS+TGEELDIIEKLY QAMKLEVEFF A
Sbjct: 233 VNHPYKKWIDNYSSDAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHA 292
Query: 243 QPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQ 302
QPLAQPT+VPL+K H + D L+IFSDFDLTCT+VDSSAILAEIAIVTAPK +Q++ Q
Sbjct: 293 QPLAQPTIVPLLKNH--SKDDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQ 350
Query: 303 LGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRAN 362
+ RM S +L+NTW LLSKQYTE YE+CIES + +K + F+YE L KALEQLS FEK AN
Sbjct: 351 IHRMLSSDLKNTWNLLSKQYTEHYEECIESILNKKKADKFDYEGLCKALEQLSDFEKEAN 410
Query: 363 SRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR 422
+RVIESGVLKG+NLEDIK+AGERL LQDGC FQK++K ENLNA +HVLSYCWCGDLIR
Sbjct: 411 NRVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIR 470
Query: 423 ASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN---- 477
A+FS+ G++A+ VHANEF+F+ESISTGEI KVESPI+K Q F + L+ +RKN
Sbjct: 471 AAFSAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQ----NRKNENNK 526
Query: 478 ---LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTE 534
LSVYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+KQK++TE
Sbjct: 527 KSFLSVYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTE 586
Query: 535 GSSSN-WKEKSGILYTVSSWAEVHAFILGW 563
SSS+ WK SG LYTVSSWAE+H+F LGW
Sbjct: 587 ESSSSAWKGLSGTLYTVSSWAEIHSFALGW 616
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110737432|dbj|BAF00660.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/570 (71%), Positives = 479/570 (84%), Gaps = 19/570 (3%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
+IPP S EE L +LWIKF RE +F++YSPF VCLA+GNLK++TFR YIAQD HFLK
Sbjct: 69 SIPPTS----EEALPGKLWIKFNRECLFSIYSPFAVCLAAGNLKIDTFRQYIAQDVHFLK 124
Query: 63 AFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKY 122
AF+ AYELA +CADDDD KL+IS+LRK V+EELKMHDSFV++W D+ K +VNSAT++Y
Sbjct: 125 AFAHAYELAADCADDDDDKLAISDLRKSVMEELKMHDSFVQDWDLDINKEVSVNSATLRY 184
Query: 123 TEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANE 182
TEFLLATASGKVEG K PG L TPFEKTKVAAYTLGA++PCMRLYAFLGKEF +LL+ ++
Sbjct: 185 TEFLLATASGKVEGCKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGSLLDLSD 244
Query: 183 GNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242
NHPY KWIDNYSS++FQASA Q EDLL+KLSVS+TGEELDIIEKLY QAMKLEVEFF A
Sbjct: 245 VNHPYKKWIDNYSSDAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHA 304
Query: 243 QPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQ 302
QPLAQPT+VPL+K H + D L+IFSDFDLTCT+VDSSAILAEIAIVTAPK +Q++ Q
Sbjct: 305 QPLAQPTIVPLLKNH--SKDDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQ 362
Query: 303 LGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRAN 362
+ RM S +L+NTW LLSKQYTE YE+CIES + +K + F+YE L KALEQLS FEK AN
Sbjct: 363 IHRMLSSDLKNTWNLLSKQYTEHYEECIESILNKKKADKFDYEGLCKALEQLSDFEKEAN 422
Query: 363 SRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR 422
+RVIESGVLKG+NLEDIK+AGERL LQDGC FQK++K ENLNA +HVLSYCWCGDLIR
Sbjct: 423 NRVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIR 482
Query: 423 ASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN---- 477
A+FS+ G++A+ VHANEF+F+ESISTGEI KVESPI+K Q F + L+ +RKN
Sbjct: 483 AAFSAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQ----NRKNENNK 538
Query: 478 ---LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTE 534
LSVYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+KQK++TE
Sbjct: 539 KSFLSVYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTE 598
Query: 535 GSSSN-WKEKSGILYTVSSWAEVHAFILGW 563
SSS+ WK SG LYTVSSWAE+H+F LGW
Sbjct: 599 ESSSSAWKGLSGTLYTVSSWAEIHSFALGW 628
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 563 | ||||||
| TAIR|locus:2145816 | 617 | AT5G32470 "AT5G32470" [Arabido | 0.985 | 0.899 | 0.696 | 2.8e-208 | |
| TIGR_CMR|BA_0725 | 231 | BA_0725 "transcriptional activ | 0.332 | 0.809 | 0.229 | 1.1e-09 | |
| UNIPROTKB|G4MTS1 | 304 | MGG_04762 "Uncharacterized pro | 0.412 | 0.763 | 0.256 | 9.2e-09 | |
| POMBASE|SPBC17G9.12c | 274 | SPBC17G9.12c "hydrolase (predi | 0.460 | 0.945 | 0.257 | 1.2e-07 | |
| UNIPROTKB|Q5HW25 | 221 | CJE0491 "TenA/Thi-4 family pro | 0.339 | 0.864 | 0.231 | 1.5e-07 | |
| TIGR_CMR|CJE_0491 | 221 | CJE_0491 "TenA/Thi-4 family pr | 0.339 | 0.864 | 0.231 | 1.5e-07 | |
| ASPGD|ASPL0000004890 | 510 | AN10762 [Emericella nidulans ( | 0.349 | 0.386 | 0.216 | 7.9e-06 | |
| POMBASE|SPBP8B7.18c | 551 | SPBP8B7.18c "TENA/THI family p | 0.174 | 0.177 | 0.26 | 7.9e-05 | |
| SGD|S000000608 | 317 | YCR015C "Putative protein of u | 0.401 | 0.712 | 0.267 | 0.00015 | |
| CGD|CAL0004824 | 288 | orf19.6732 [Candida albicans ( | 0.323 | 0.631 | 0.252 | 0.00016 |
| TAIR|locus:2145816 AT5G32470 "AT5G32470" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2014 (714.0 bits), Expect = 2.8e-208, P = 2.8e-208
Identities = 394/566 (69%), Positives = 468/566 (82%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
+IPP S EE L +LWIKF RE +F++YSPF VCLA+GNLK++TFR YIAQD HFLK
Sbjct: 57 SIPPTS----EEALPGKLWIKFNRECLFSIYSPFAVCLAAGNLKIDTFRQYIAQDVHFLK 112
Query: 63 AFSQXXXXXXXXXXXXXXKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKY 122
AF+ KL+IS+LRK V+EELKMHDSFV++W D+ K +VNSAT++Y
Sbjct: 113 AFAHAYELAADCADDDDDKLAISDLRKSVMEELKMHDSFVQDWDLDINKEVSVNSATLRY 172
Query: 123 TEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANE 182
TEFLLATASGKVEG K PG L TPFEKTKVAAYTLGA++PCMRLYAFLGKEF +LL+ ++
Sbjct: 173 TEFLLATASGKVEGCKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGSLLDLSD 232
Query: 183 GNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242
NHPY KWIDNYSS++FQASA Q EDLL+KLSVS+TGEELDIIEKLY QAMKLEVEFF A
Sbjct: 233 VNHPYKKWIDNYSSDAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHA 292
Query: 243 QPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQ 302
QPLAQPT+VPL+K H+ D L+IFSDFDLTCT+VDSSAILAEIAIVTAPK +Q++ Q
Sbjct: 293 QPLAQPTIVPLLKNHSK--DDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQ 350
Query: 303 LGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRAN 362
+ RM S +L+NTW LLSKQYTE YE+CIES + +K + F+YE L KALEQLS FEK AN
Sbjct: 351 IHRMLSSDLKNTWNLLSKQYTEHYEECIESILNKKKADKFDYEGLCKALEQLSDFEKEAN 410
Query: 363 SRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR 422
+RVIESGVLKG+NLEDIK+AGERL LQDGC FQK++K ENLNA +HVLSYCWCGDLIR
Sbjct: 411 NRVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIR 470
Query: 423 ASFSSG-LNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLE--KYGTDRKN-L 478
A+FS+G ++A+ VHANEF+F+ESISTGEI KVESPI+K Q F + L+ K ++K+ L
Sbjct: 471 AAFSAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQNRKNENNKKSFL 530
Query: 479 SVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSS 538
SVYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+KQK++TE SSS
Sbjct: 531 SVYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTEESSS 590
Query: 539 N-WKEKSGILYTVSSWAEVHAFILGW 563
+ WK SG LYTVSSWAE+H+F LGW
Sbjct: 591 SAWKGLSGTLYTVSSWAEIHSFALGW 616
|
|
| TIGR_CMR|BA_0725 BA_0725 "transcriptional activator TenA, putative" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 160 (61.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/209 (22%), Positives = 97/209 (46%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSISELRKGVLE- 93
PF V + G L+ + F++YI QD+ +L +++ +E G+L
Sbjct: 22 PFVVGMGDGTLEKDKFQYYIIQDYLYLLDYAKLYAIGVVKATNPQVMGKFAEQIDGILNG 81
Query: 94 ELKMHDSFVKEWGTDLAKM--ATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
E+ +H + K G + ++ A ++ + YT ++++ + G LA
Sbjct: 82 EMTIHKQYAKRLGISIEEIESAKPSAKNLAYTNYMMSVSQN--------GTLAE------ 127
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD 211
+ A+ PCM Y +GK + + A + + +WI YSSE + + DLL+
Sbjct: 128 ----LIAALLPCMWSYWEIGKRLNDIPGARDHEF-FGEWIQGYSSEEYGNLCIWLIDLLN 182
Query: 212 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+++V + +ELD +E+++ + + E F+
Sbjct: 183 EMAVGKSEKELDRLEEIFLYSSRFEYLFW 211
|
|
| UNIPROTKB|G4MTS1 MGG_04762 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 159 (61.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 68/265 (25%), Positives = 115/265 (43%)
Query: 269 DFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQ 328
DFD T DS L E + K Q+ +L TW + Y +++
Sbjct: 6 DFDGTIIAKDSINCLGEFGVSHQQKHRQH------------DLSPTWKQIVSDYLADHKM 53
Query: 329 CIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSL 388
+ ++ P+E + ++ L L H + ++ +RV ++ + +G +D+ AG R ++
Sbjct: 54 HVSAYSPAE-ADRLTHDDERAFLHSLQHVDVKSLARVADARIFEGCTADDLYGAG-REAV 111
Query: 389 QDGCTT----FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL--NVHANEFSF 441
+ G F + V A + +LS W IR S G + + +V +NE +
Sbjct: 112 RTGKVAARGGFAEFVAVMRGAGATLSILSVNWSASFIRGVLSQCGDDVVIEDVVSNEITA 171
Query: 442 KESIST-GEIIEKVESP----IDKVQAFNNTLEKYGTDRKNLS----VYIGDSVGDLLCL 492
I GE +P + K++A +D +S +Y GDS DL CL
Sbjct: 172 DGKIGCLGEGGGAQGTPMMTSLHKLEALR-ARSAASSDENEISSKITIYFGDSTTDLECL 230
Query: 493 LEADIGIVIGS--SSSLRRVGSQFG 515
L ADIGIV+ + +SSL R ++ G
Sbjct: 231 LAADIGIVMANDENSSLLRALARLG 255
|
|
| POMBASE|SPBC17G9.12c SPBC17G9.12c "hydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 80/311 (25%), Positives = 133/311 (42%)
Query: 264 LIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYT 323
++ DFD T T D+ +LAE A+ N+PE W ++S +Y
Sbjct: 1 MLYIVDFDETITTYDTIHLLAE-AV--------NKPEE-------------WSVISDKYW 38
Query: 324 EEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG 383
+EY E+ S + + Y L L + E+ + R+ +S G++ +
Sbjct: 39 QEYLAWREALPHSTTLTS--YLPL---LGGSRYLEEASIKRIEKSQYFSGLSEGALDNIV 93
Query: 384 ERLSLQDGCTTFFQKVVKNENLNANV-HVLSYCWCGDLIRASF--SSGLNA--LNVHANE 438
+ ++L+ G F +V + ++ + HVLS W +I + + L A L VHAN+
Sbjct: 94 QLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHAND 153
Query: 439 FSFKESIST--GEIIEKVESPI-----DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 491
F F S +T G I+ + S + DKV+ F ++ VYIGDS D C
Sbjct: 154 FDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGC 213
Query: 492 LLEADIGIVIGSSSSLRRVGSQF-GVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTV 550
L + I I++ S+ + S+F V + + V+K G I+YT
Sbjct: 214 LQISPISILMRSNQKYYDILSRFEDVQLVDISEFPVQKA---VPGKK--------IIYTC 262
Query: 551 SSWAEVH-AFI 560
S W + AF+
Sbjct: 263 SDWCAIQKAFL 273
|
|
| UNIPROTKB|Q5HW25 CJE0491 "TenA/Thi-4 family protein" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/212 (23%), Positives = 93/212 (43%)
Query: 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSISELRKGV 91
++ F L +LK E F Y+ QD+ +L +++ + + +
Sbjct: 18 LHHDFVKKLEDKSLKQENFLFYLKQDYIYLLNYAKCYARLALNSNTAKELRFAMKFQNYI 77
Query: 92 LE-ELKMHDSFVKEW-GTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEK 149
+E E+++H + + D + + + Y+ ++L+ G G F
Sbjct: 78 VEGEMELHRAILSLGINADELDIKDESLVNIAYSRYMLSV------GENGD------FLD 125
Query: 150 TKVAAYTLGAMSPCMRLYAFLGKEF-HALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
VA +S C YA +G E + L N N +HPY +WI Y SE+FQ A + ED
Sbjct: 126 MLVA------LSACAIGYAKIGAEIINRLKNENLKDHPYKEWILTYGSENFQNEAKEFED 179
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++ + S+ ++ + +++H +LEV F+
Sbjct: 180 FVNSYTSSVGAQKFQKLSEIFHTVTRLEVAFW 211
|
|
| TIGR_CMR|CJE_0491 CJE_0491 "TenA/Thi-4 family protein" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/212 (23%), Positives = 93/212 (43%)
Query: 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSISELRKGV 91
++ F L +LK E F Y+ QD+ +L +++ + + +
Sbjct: 18 LHHDFVKKLEDKSLKQENFLFYLKQDYIYLLNYAKCYARLALNSNTAKELRFAMKFQNYI 77
Query: 92 LE-ELKMHDSFVKEW-GTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEK 149
+E E+++H + + D + + + Y+ ++L+ G G F
Sbjct: 78 VEGEMELHRAILSLGINADELDIKDESLVNIAYSRYMLSV------GENGD------FLD 125
Query: 150 TKVAAYTLGAMSPCMRLYAFLGKEF-HALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
VA +S C YA +G E + L N N +HPY +WI Y SE+FQ A + ED
Sbjct: 126 MLVA------LSACAIGYAKIGAEIINRLKNENLKDHPYKEWILTYGSENFQNEAKEFED 179
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++ + S+ ++ + +++H +LEV F+
Sbjct: 180 FVNSYTSSVGAQKFQKLSEIFHTVTRLEVAFW 211
|
|
| ASPGD|ASPL0000004890 AN10762 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 137 (53.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 47/217 (21%), Positives = 97/217 (44%)
Query: 27 ESVFAMYSP--FTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSI 84
+SV+ ++ F + L SG L +E F+ Y+ QD+ +L F++ +
Sbjct: 302 QSVWKRFTEHEFVLGLGSGTLPVERFKEYLVQDYLYLVQFARSNALASYKAKDMESIAAS 361
Query: 85 SELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLA 144
+++ + +E +H + +G +M V T TA + + G+ +
Sbjct: 362 AKIVLHIQQETALHIDYCASFGLSKEEMEKVPETTA-------CTAYSRY--ILDVGQ-S 411
Query: 145 TPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNA-NEGNHPYTKWIDNYSSESFQASA 203
+ +V A++PC+ Y + + HA EGN Y KWI+NY +E + +
Sbjct: 412 EDWLALQV------ALAPCLIGYGAIAQRLHAEEKTLREGNR-YWKWIENYVAEDYTEAV 464
Query: 204 LQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+LL+ ++ ++ + K++ +A +LE+ F+
Sbjct: 465 RLGSELLETHMRKVSLSRMEELVKIFIKATELEIMFW 501
|
|
| POMBASE|SPBP8B7.18c SPBP8B7.18c "TENA/THI family protein" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 94 (38.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSISELRKGVLEEL 95
FT LA G L L F+ Y+ QD+ +L F++ L ++ V+EE
Sbjct: 345 FTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYSLKGYKENTFPNILEAAQSVIHVIEEK 404
Query: 96 KMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGK 133
++H S +G L K + A Y+ ++L T + +
Sbjct: 405 ELHVSMCSSYGVSLQDLKSCEESPACTAYSRYILDTGAAQ 444
|
|
| SGD|S000000608 YCR015C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 70/262 (26%), Positives = 114/262 (43%)
Query: 263 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTW--GLLSK 320
+ II SDFD T T VD+ +A++ + P+ +PE G T+ G
Sbjct: 2 KTIIISDFDETITRVDTICTIAKLPYLLNPRL---KPE-------WGHFTKTYMDGYHKY 51
Query: 321 QYTEEYE-QCIESFMPSE-KVENFNYETLHKALEQLSH---FEKRANSRVIESGVLKGIN 375
+Y + S +P+ NFN + L+ +H E + + + + + K I+
Sbjct: 52 KYNGTRSLPLLSSGVPTIISQSNFN-KLFADELKYQNHNRVVELNSVNEITKQQIFKSIS 110
Query: 376 LEDIKKAG-----ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSG-L 429
L+ +K E L+DG TF VVKN ++ +VLS W + I L
Sbjct: 111 LDQMKTFARDQNHEDCLLRDGFKTFCSSVVKN--FESDFYVLSINWSKEFIHEVIGDRRL 168
Query: 430 NALNVHANEF---SFKESIS-TGEIIEKVESPIDKVQAFNNTLEKY--GTDRKNLSV--- 480
++ N+ S K S S GE ++ + DKV+ L+K G +++ S
Sbjct: 169 KNSHIFCNDLKKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKEGNSCSYW 228
Query: 481 YIGDSVGDLLCLLEADI-GIVI 501
YIGDS DLL +L G+++
Sbjct: 229 YIGDSETDLLSILHPSTNGVLL 250
|
|
| CGD|CAL0004824 orf19.6732 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 51/202 (25%), Positives = 93/202 (46%)
Query: 320 KQYTEEYEQCIESF-MPSE---KVENFNYETLH-KALEQLSHFEKRANSRVIESGVLKGI 374
+ Y + Y SF P+ +E +Y + K ++LS E ++ + +S + +G+
Sbjct: 61 ESYNQNYTNLKNSFNFPNTTTTSIECSDYLSQQIKFQDELSTVENQSIELIEQSKIFEGL 120
Query: 375 NLEDIKKA----GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GL 429
+D + ++ L+ G F Q V + +NLN + ++S W I+ ++ GL
Sbjct: 121 TKKDFQDYVNINHNKIKLRPG---FSQFVKRCQNLNIPIIIVSANWTSIFIKQCLANHGL 177
Query: 430 NALNVHANEFSF-------KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYI 482
++ NE SF K ++T + +K + I Q + +++ ++ L +YI
Sbjct: 178 AVDDIITNELSFHSDDEEAKTKMTTTGLWDKSKYTIRTSQDKLDIVKQIQEEKDGLIMYI 237
Query: 483 GDSVGDLLCLLEADIGIVIGSS 504
GDSV DLL LL D I S
Sbjct: 238 GDSVTDLLPLLNVDFPCAIKGS 259
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 563 | |||
| COG0819 | 218 | COG0819, TenA, Putative transcription activator [T | 2e-37 | |
| PTZ00347 | 504 | PTZ00347, PTZ00347, phosphomethylpyrimidine kinase | 1e-24 | |
| pfam03070 | 210 | pfam03070, TENA_THI-4, TENA/THI-4/PQQC family | 8e-21 | |
| PRK14713 | 530 | PRK14713, PRK14713, multifunctional hydroxymethylp | 2e-20 | |
| TIGR04306 | 208 | TIGR04306, salvage_TenA, thiaminase II | 1e-19 | |
| PRK09517 | 755 | PRK09517, PRK09517, multifunctional thiamine-phosp | 4e-15 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 3e-05 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 6e-05 |
| >gnl|CDD|223889 COG0819, TenA, Putative transcription activator [Transcription] | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 2e-37
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADD-DDAKLSISELRKGVLE 93
PF LA G L E F+ Y+ QD+ +L F++A L A D + + ++ V
Sbjct: 22 PFVQELADGTLPREKFQFYLVQDYLYLVNFARALALLASKAPDLELMEELAKIIQFLVEG 81
Query: 94 ELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATA-SGKVEGVKGPGKLATPFEKT 150
E+++H+ +E G L ++ + A YT +LL TA SG
Sbjct: 82 EMELHERLAEELGISLDELLKTEPSPANKAYTRYLLDTAYSGSF---------------- 125
Query: 151 KVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLL 210
A L A+ PC+ YA +GK A A+ N PY +WID Y+SE FQ + + E LL
Sbjct: 126 ---AELLAALLPCLWGYAEIGKRLKAKPRASP-NPPYQEWIDTYASEEFQEAVEELEALL 181
Query: 211 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
D L+ + + EEL+ +++++ A + E+ F+
Sbjct: 182 DSLAENSSEEELEKLKQIFLTASRFELAFW 211
|
Length = 218 |
| >gnl|CDD|240375 PTZ00347, PTZ00347, phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-24
Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 11 PEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYEL 70
P GL+ LW + + ++ +++ PF L G L FR YIAQD +L + +
Sbjct: 8 PVFGGLSEALWKENQDLAMMSLHLPFVQGLGDGTLDQNAFRTYIAQDTLYLNGYIRILSY 67
Query: 71 AEECADDDDAKLSISELRKGVLEELK-MHDSFVKEWGTDLAKMATVNSATVKYTEFLLAT 129
+D + EL KGVLEELK H ++ D A +A KY +FLLA+
Sbjct: 68 CITKSDVTATGGGLLELLKGVLEELKNCHHHYI-----DNPDAAGPEAACRKYVDFLLAS 122
Query: 130 ASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTK 189
+ G + + A+ PC RLYA++G+E + E +HP+ +
Sbjct: 123 GNADTLG----------------PSVVIAAVIPCARLYAWVGQELTNEVELTE-SHPFRR 165
Query: 190 WIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
W+ +YS E S Q E LLDK GE + + + Y +AM+LE +FF
Sbjct: 166 WLLSYSDEPINTSVEQLESLLDKY--IRPGEFSE-VAQAYRRAMELEYDFF 213
|
Length = 504 |
| >gnl|CDD|217351 pfam03070, TENA_THI-4, TENA/THI-4/PQQC family | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 8e-21
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYE-LAEECADDDDAKLSISELRKGVLE 93
PF LA G L E F+ Y+ QD+ +LK F + LA + D + + I + +
Sbjct: 15 PFVQALAKGTLPREQFQAYLIQDYLYLKNFPRVLAILASKAPDLELRREWIDRILDHIGG 74
Query: 94 ELKMHDSFVKEWGTDLAK-MATVNSATVK-YTEFLLATASGKVEGVKGPGKLATPFEKTK 151
E+++H + G T K Y +LL A
Sbjct: 75 EIELHLRLAEALGLSREDLSKTEPLPAAKAYVNYLLDLAR------------------RG 116
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD 211
L A+ PC+ +Y + + +N G+ Y +WID+Y SE F+++ + E LL+
Sbjct: 117 SWLEALAALLPCLFVYQEIAERLKEKINGLSGS-EYYEWIDDYGSEEFRSAVEEAERLLN 175
Query: 212 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
L ++ EL+ +++++ +++ E+ F+
Sbjct: 176 HLLAYVSDSELEELQEIFLTSLEFELSFW 204
|
Members of this family are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes. In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase. The THI-4 protein, which is involved in thiamine biosynthesis, is also a member of this family. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4. This family includes bacterial coenzyme PQQ synthesis protein C or PQQC proteins. Pyrroloquinoline quinone (PQQ) is the prosthetic group of several bacterial enzymes,including methanol dehydrogenase of methylotrophs and the glucose dehydrogenase of a number of bacteria. PQQC has been found to be required in the synthesis of PQQ but its function is unclear. The exact molecular function of members of this family is uncertain. Length = 210 |
| >gnl|CDD|237797 PRK14713, PRK14713, multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 2e-20
Identities = 68/243 (27%), Positives = 104/243 (42%), Gaps = 29/243 (11%)
Query: 2 AAIPPKSPSPEEEG-LARRLW--IKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDF 58
+A P G LW RE++ + PF LA G L E F Y+AQD
Sbjct: 305 SAEPAPDAVVGPAGPFTAALWQASGPIREAIEDL--PFVRALADGTLPEEAFEFYLAQDA 362
Query: 59 HFLKAFSQAYELAEECADDDDAKLSISELRKGVLE-ELKMHDSFVKEWGTDLAKMATVNS 117
+L +S+A A D ++ ++ + LE E ++H S W D +
Sbjct: 363 LYLNGYSRALARLAALAPDPAEQVFWAQSAQACLEVESELHRS----WLGDRDADTAPSP 418
Query: 118 ATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHAL 177
T+ YT+FLLA A+G V AA A+ PC LYA +G E HA
Sbjct: 419 VTLAYTDFLLARAAGGSYAV--------------GAA----AVLPCFWLYAEVGAELHAR 460
Query: 178 LNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEV 237
N +HPY +W+ Y+ F A+ + +D+ + + E + + + A + E+
Sbjct: 461 A-GNPDDHPYAEWLQTYADPEFAAATRRAIAFVDRAFRAASPAERAAMARAFLTACRYEL 519
Query: 238 EFF 240
EFF
Sbjct: 520 EFF 522
|
Length = 530 |
| >gnl|CDD|213919 TIGR04306, salvage_TenA, thiaminase II | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 1e-19
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-DDDDAKLSISELRKGVLE 93
PF + G L+ + FR YI QD+ +L +++ + L A D+D K +S ++ GV
Sbjct: 12 PFVQKIGDGTLERDKFRFYIEQDYAYLVEYAKVHALGGSKACDEDMEKELVSHIQGGVET 71
Query: 94 ELKMHDSFVKEWGT---DLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKT 150
E+ H + G + + A YT ++ +G
Sbjct: 72 EMGQHKRLAEVLGISDEEYFQKIKPGPALRSYTSYMYD------VSRRGN---------- 115
Query: 151 KVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLL 210
+ A+ PC+ Y + A E + Y KWI+ YSS F+ + + E+LL
Sbjct: 116 --WQELVAALLPCLWGYGEAATKLKGKHTAPEHSV-YHKWIETYSSSWFREAVNEGENLL 172
Query: 211 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ L+ + + EEL+ +++++ ++ + E F+
Sbjct: 173 NHLAETSSPEELEKLKEIFAESCEYEYNFW 202
|
The TenA protein of Bacillus subtilis and Staphylococcus aurues, and the C-terminal region of trifunctional protein Thi20p from Saccharomyces cerevisiae, perform cleavages on thiamine and related compounds to produce 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP), a substrate a salvage pathway for thiamine biosynthesis. The gene symbol tenA, for Transcription ENhancement A, reflects a misleading early characterization as a regulatory protein. This family is related to PqqC from the PQQ biosynthesis system (see TIGR02111), heme oxygenase (pfam01126), and CADD (Chlamydia protein Associating with Death Domains), a putative folate metabolism enzyme (see TIGR04305). Length = 208 |
| >gnl|CDD|169939 PRK09517, PRK09517, multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 4e-15
Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 25/214 (11%)
Query: 34 SPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93
S F L G L+ F YI QD +L+ +S+A A D A++ E + E
Sbjct: 564 SDFIRMLGDGTLRRPEFDFYIDQDAQYLRQYSRALARLSSIAPDSHAQV---EWAQSAAE 620
Query: 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVA 153
+ + + + + + + T+ YT+FL+A T+
Sbjct: 621 CIVVEAELHRSYLSGKEAPSAPSPVTMAYTDFLIARTY------------------TEDY 662
Query: 154 AYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKL 213
+ A+ PC LYA +G L N HPY W++ YS E F A ++K
Sbjct: 663 VVGVAAVLPCYWLYAEIGLM---LAEQNHDEHPYKDWLNTYSGEEFIAGTRAAIARVEKA 719
Query: 214 SVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQ 247
+ E+ + + A E EFF Q
Sbjct: 720 LENAGPEQRVDAARAFLSASVHEREFF-DQATRH 752
|
Length = 755 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 17/189 (8%)
Query: 326 YEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER 385
+ I+ VE E +A+ F+ RV +LKG+ +E +K+ E
Sbjct: 27 NAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERV---ALLKGLPVELLKEVREN 83
Query: 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESI 445
L L +G + V + V V+S + DL L AN ++
Sbjct: 84 LPLTEGAE---ELVKTLKEKGYKVAVISGGF--DLFAEHVKDKLGLDAAFANRLEVEDGK 138
Query: 446 STGEIIEKVESPIDKVQAFNNTL----EKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501
TG VE PI TL K G +N +V +GD DL + A +GI
Sbjct: 139 LTG----LVEGPIVDASYKGKTLLILLRKEGISPEN-TVAVGDGANDLSMIKAAGLGIAF 193
Query: 502 GSSSSLRRV 510
+ L++
Sbjct: 194 NAKPKLQQK 202
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 429 LNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGD 488
L V ANE + TG ++ + K +A + G + +V GDS D
Sbjct: 114 LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLEE-TVAYGDSAND 172
Query: 489 LLCLLEADIGIVIGSSSSLRRV 510
L L A + I + LR +
Sbjct: 173 LPMLEAAGLPIAVNPKPKLRAL 194
|
Length = 212 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 563 | |||
| COG0819 | 218 | TenA Putative transcription activator [Transcripti | 100.0 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 100.0 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 100.0 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 100.0 | |
| PF03070 | 210 | TENA_THI-4: TENA/THI-4/PQQC family; InterPro: IPR0 | 100.0 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.95 | |
| KOG2598 | 523 | consensus Phosphomethylpyrimidine kinase [Coenzyme | 99.91 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.91 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.91 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.89 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.87 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.87 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 99.85 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 99.85 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.83 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.82 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.82 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.8 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.8 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.78 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.78 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.73 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.73 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.73 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.7 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.68 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.53 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.53 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 99.36 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.13 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.96 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 98.9 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.9 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.9 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.89 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.86 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 98.84 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.82 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.82 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 98.8 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.72 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 98.72 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 98.69 | |
| PRK05157 | 246 | pyrroloquinoline quinone biosynthesis protein PqqC | 98.69 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.69 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.69 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 98.69 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 98.68 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 98.67 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 98.64 | |
| COG5424 | 242 | Pyrroloquinoline quinone (Coenzyme PQQ) biosynthes | 98.64 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 98.62 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.61 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 98.59 | |
| TIGR02111 | 239 | PQQ_syn_pqqC coenzyme PQQ biosynthesis protein C. | 98.59 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 98.56 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 98.56 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 98.56 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 98.53 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.52 | |
| PLN02940 | 382 | riboflavin kinase | 98.5 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 98.45 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 98.4 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 98.36 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.32 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 98.32 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 98.31 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 98.27 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 98.25 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 98.24 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 98.24 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.23 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.2 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 98.19 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 98.19 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 98.16 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.14 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.09 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.08 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 98.07 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.03 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 98.03 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.97 | |
| PLN02811 | 220 | hydrolase | 97.97 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 97.97 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.96 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.94 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 97.93 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.93 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.91 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.91 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.88 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.82 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.82 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.8 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 97.8 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.79 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 97.78 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.76 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.72 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.67 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 97.66 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 97.65 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 97.62 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.61 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.6 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.59 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 97.58 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.55 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 97.52 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 97.5 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 97.47 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 97.46 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.44 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.43 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.39 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 97.37 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 97.34 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 97.33 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.3 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.29 | |
| PLN02887 | 580 | hydrolase family protein | 97.28 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 97.28 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 97.24 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.24 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.23 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.21 | |
| CHL00168 | 238 | pbsA heme oxygenase; Provisional | 97.19 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.17 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 97.15 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.14 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 97.13 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.07 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.06 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.04 | |
| cd00232 | 203 | HemeO Heme oxygenase catalyzes the rate limiting s | 96.96 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.96 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.95 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 96.93 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.88 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 96.86 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.84 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 96.78 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.74 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.68 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.68 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.68 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.62 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.6 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.58 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 96.55 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.51 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.41 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.39 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.09 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.02 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 95.99 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 95.92 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 95.8 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 95.44 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.34 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 95.26 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.09 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.01 | |
| PF12981 | 231 | DUF3865: Domain of Unknown Function with PDB struc | 94.87 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.74 | |
| PF01126 | 205 | Heme_oxygenase: Heme oxygenase; InterPro: IPR01605 | 94.59 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 94.3 | |
| PLN02423 | 245 | phosphomannomutase | 94.24 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 94.14 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 94.08 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 93.38 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.36 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 93.14 | |
| PLN02580 | 384 | trehalose-phosphatase | 92.85 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.65 | |
| COG5398 | 238 | Heme oxygenase [Inorganic ion transport and metabo | 92.44 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 91.78 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 91.11 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 90.93 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 90.91 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 89.47 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 89.2 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 86.2 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 85.7 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 85.23 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 85.2 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 84.7 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 84.45 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 84.33 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 84.24 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 83.74 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 83.41 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 82.22 |
| >COG0819 TenA Putative transcription activator [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=364.87 Aligned_cols=210 Identities=30% Similarity=0.472 Sum_probs=195.4
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL- 92 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~- 92 (563)
+.|++.||+..++.|...++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++.+.+..+...+..+.
T Consensus 1 ~~f~~~L~~~~~~~W~~~~~H~FV~~L~~GtL~~~~F~~YL~QDy~YL~~~~ra~~~~~~ka~~~~~~~~~~~~~~~~~~ 80 (218)
T COG0819 1 MMFSEELIRAAQPIWQKYIEHPFVQELADGTLPREKFQFYLVQDYLYLVNFARALALLASKAPDLELMEELAKIIQFLVE 80 (218)
T ss_pred CchHHHHHHHhHHHHHHHcCCHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999888887777665
Q ss_pred HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 93 EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
.|+.+|+++++++||+.++ ..+++|+|.+|++||++++. |+ ++++++||+||+|+|++
T Consensus 81 ~E~~~h~~~~~~lgis~~~~~~~~~~~~~~aYt~ym~~~~~~g~-------------------~~~~~aAl~PC~~~Y~e 141 (218)
T COG0819 81 GEMELHERLAEELGISLDELLKTEPSPANKAYTRYLLDTAYSGS-------------------FAELLAALLPCLWGYAE 141 (218)
T ss_pred HHHHHHHHHHHHhCCCHHHHHhcCCCchHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHH
Confidence 5999999999999999742 57899999999999999996 54 36899999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
||+++..... ..++++|++||++|+|++|.+.|.+++++||+++...+++++++|.++|.+++++|.+||++|
T Consensus 142 ig~~~~~~~~-~~~~~~Y~~Wi~~Y~s~ef~~~v~~~~~~ld~~~~~~~~~~~~~l~~iF~~ss~~E~~Fwd~a 214 (218)
T COG0819 142 IGKRLKAKPR-ASPNPPYQEWIDTYASEEFQEAVEELEALLDSLAENSSEEELEKLKQIFLTASRFELAFWDMA 214 (218)
T ss_pred HHHHHHhccc-cCCCCcHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988653 347899999999999999999999999999999999999999999999999999999999999
|
|
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=383.21 Aligned_cols=217 Identities=27% Similarity=0.429 Sum_probs=195.5
Q ss_pred CCCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 008499 7 KSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISE 86 (563)
Q Consensus 7 ~~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~ 86 (563)
+..+..+++|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++..
T Consensus 311 ~~~~~~~~~fs~~L~~~~~~~w~~~~~HpFv~~L~~GtL~~~~F~~Yl~QD~~yL~~~~r~~a~~~aka~~~e~~~~~~~ 390 (530)
T PRK14713 311 DAVVGPAGPFTAALWQASGPIREAIEDLPFVRALADGTLPEEAFEFYLAQDALYLNGYSRALARLAALAPDPAEQVFWAQ 390 (530)
T ss_pred cccCCCCccHHHHHHHhhHHHHHHHHcChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 33444678999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHH-HHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 008499 87 LRKGV-LEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMR 165 (563)
Q Consensus 87 ~~~~i-~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~ 165 (563)
.+..+ .+|+++|+.++++||++ .+++|+|++|++||+++++.+. ++++++||+||+|
T Consensus 391 ~~~~~~~~E~~~h~~~~~~~~~~----~~~~p~~~aY~~~l~~~a~~~~------------------~~~~l~AllPC~~ 448 (530)
T PRK14713 391 SAQACLEVESELHRSWLGDRDAD----TAPSPVTLAYTDFLLARAAGGS------------------YAVGAAAVLPCFW 448 (530)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcc----CCCChHHHHHHHHHHHHHhcCC------------------HHHHHHHHHhHHH
Confidence 76655 57999999999999873 6789999999999999986332 3689999999999
Q ss_pred HHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 008499 166 LYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPL 245 (563)
Q Consensus 166 ~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~ 245 (563)
+|.+||+++.... ...++|+|++||++|++++|.+++.++++++|+++..++++++++|+++|+++|+||++|||+| +
T Consensus 449 ~Y~~ig~~l~~~~-~~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~~~~~F~~a~~~E~~Fwd~A-~ 526 (530)
T PRK14713 449 LYAEVGAELHARA-GNPDDHPYAEWLQTYADPEFAAATRRAIAFVDRAFRAASPAERAAMARAFLTACRYELEFFDQA-R 526 (530)
T ss_pred HHHHHHHHHHhhc-cCCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 9999999987531 1225789999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CC
Q 008499 246 AQ 247 (563)
Q Consensus 246 ~~ 247 (563)
++
T Consensus 527 ~~ 528 (530)
T PRK14713 527 RR 528 (530)
T ss_pred cc
Confidence 54
|
|
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=371.04 Aligned_cols=235 Identities=29% Similarity=0.464 Sum_probs=197.4
Q ss_pred CCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 008499 10 SPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89 (563)
Q Consensus 10 ~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~ 89 (563)
+++..+|+++||+++.+.|..+++||||++|++||||+++|++||+||++||.+|+|+++++++|+++.+++..+...+.
T Consensus 7 ~~~~~~fs~~L~~~~~~~~~~~~~HpFv~~l~~GtL~~~~F~~Yl~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~~ 86 (504)
T PTZ00347 7 EPVFGGLSEALWKENQDLAMMSLHLPFVQGLGDGTLDQNAFRTYIAQDTLYLNGYIRILSYCITKSDVTATGGGLLELLK 86 (504)
T ss_pred CCCCCCHHHHHHHhHHHHHHHHhCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999999999999999999999998888887776
Q ss_pred HHH-HHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 008499 90 GVL-EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (563)
Q Consensus 90 ~i~-~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (563)
.+. +|..+|+++++. .+..+++|+|++|++||++++..+.++ ++++++||+||+|+|.
T Consensus 87 ~~~~~e~~~h~~~~~~-----~~~~~~~p~~~aY~~~l~~~a~~g~~~----------------~~~~l~Al~pC~~~Y~ 145 (504)
T PTZ00347 87 GVLEELKNCHHHYIDN-----PDAAGPEAACRKYVDFLLASGNADTLG----------------PSVVIAAVIPCARLYA 145 (504)
T ss_pred HHHHHHHHHHHHHHhh-----hhccCCCHHHHHHHHHHHHHHhcCCcc----------------hHHHHHHHHHHHHHHH
Confidence 665 577899999632 134678999999999999999643321 2689999999999999
Q ss_pred HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008499 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQP 248 (563)
Q Consensus 169 ~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~~~ 248 (563)
+||+++..... ..++|+|++||++|++++|.+++.++++++|+++. ++++++++++|+++|++|++||++| +++.
T Consensus 146 ~ig~~l~~~~~-~~~~~~y~~Wi~~y~~~~f~~~~~~~~~~ld~~~~---~~~~~~~~~~F~~~~~~E~~Fw~~A-y~~~ 220 (504)
T PTZ00347 146 WVGQELTNEVE-LTESHPFRRWLLSYSDEPINTSVEQLESLLDKYIR---PGEFSEVAQAYRRAMELEYDFFDSF-GYCL 220 (504)
T ss_pred HHHHHHHhccC-CCCCChHHHHHHhcCCHHHHHHHHHHHHHHHHHhc---hhhHHHHHHHHHHHHHHHHHHhHhH-Hhhh
Confidence 99999876332 12568999999999999999999999999999963 4788899999999999999999999 6554
Q ss_pred cccccccCCCCCCCCeEEeeccccc
Q 008499 249 TVVPLIKGHNPAGDRLIIFSDFDLT 273 (563)
Q Consensus 249 ~~~p~~~~~~~~~~~~~ii~DFD~T 273 (563)
-||...... .+..+.|.=.|-+
T Consensus 221 -~w~~~~~~~--~~~vLtIag~D~s 242 (504)
T PTZ00347 221 -GRPVENPMK--IPTVLTVSGSDSG 242 (504)
T ss_pred -cccccCCCC--CCeEEEEeCcCCC
Confidence 378655332 2344555544443
|
|
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=386.96 Aligned_cols=216 Identities=24% Similarity=0.351 Sum_probs=194.6
Q ss_pred CCCCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 008499 6 PKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSIS 85 (563)
Q Consensus 6 ~~~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~ 85 (563)
++....++.+|+++||+...+.|...++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++.+++.++.
T Consensus 536 ~~~~~~~~~~f~~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~yar~~a~~~aka~~~~~~~~~~ 615 (755)
T PRK09517 536 PAPRIEPAGPFTRALWEASGDIIAEINDSDFIRMLGDGTLRRPEFDFYIDQDAQYLRQYSRALARLSSIAPDSHAQVEWA 615 (755)
T ss_pred cccccCCCCChHHHHHHHhHHHHHHHhcChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 34455566789999999999999999999999999999999999999999999999999999999999999988877777
Q ss_pred HHHH-HHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 008499 86 ELRK-GVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCM 164 (563)
Q Consensus 86 ~~~~-~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~ 164 (563)
..+. .+..|+++|+++++++|++ .+++|+|++|++||+++++.+. ++++++||+||+
T Consensus 616 ~~~~~~~~~E~~~h~~~~~~~~~~----~~~~p~~~aYt~~l~~~a~~g~------------------~~~~laAllPC~ 673 (755)
T PRK09517 616 QSAAECIVVEAELHRSYLSGKEAP----SAPSPVTMAYTDFLIARTYTED------------------YVVGVAAVLPCY 673 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcC----CCCChHHHHHHHHHHHHHhcCC------------------HHHHHHHHHHHH
Confidence 6655 4567999999999999863 6789999999999999986332 468999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008499 165 RLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQP 244 (563)
Q Consensus 165 ~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~ 244 (563)
|+|.+||+++.+.. .++|+|++||++|++++|.++|.++++++|+++..++++++++|+++|.++|+||++||||+
T Consensus 674 w~Y~~ig~~l~~~~---~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~l~~~F~~a~~lE~~Fwd~A- 749 (755)
T PRK09517 674 WLYAEIGLMLAEQN---HDEHPYKDWLNTYSGEEFIAGTRAAIARVEKALENAGPEQRVDAARAFLSASVHEREFFDQA- 749 (755)
T ss_pred HHHHHHHHHHHhcc---CCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 99999999997632 25679999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 008499 245 LAQ 247 (563)
Q Consensus 245 ~~~ 247 (563)
+++
T Consensus 750 ~~~ 752 (755)
T PRK09517 750 TRH 752 (755)
T ss_pred Hhc
Confidence 543
|
|
| >PF03070 TENA_THI-4: TENA/THI-4/PQQC family; InterPro: IPR004305 Proteins containing this domain are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=325.86 Aligned_cols=203 Identities=35% Similarity=0.556 Sum_probs=183.5
Q ss_pred HHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHH
Q 008499 21 WIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAK-LSISELRKGVLEELKMHD 99 (563)
Q Consensus 21 w~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~-~~l~~~~~~i~~E~~~h~ 99 (563)
|++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++.+++++++.+.+ .++..+...+.+|+++|+
T Consensus 1 ~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~Yl~QD~~yl~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 80 (210)
T PF03070_consen 1 HQKAEPIWEAILNHPFVQELADGTLPKEAFRYYLIQDYHYLKHFARALALLASKAPDPEEQRELLSRLIQEIEEELELHE 80 (210)
T ss_dssp SHHTHHHHHHHHTSHHHHHHHTTESEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHCCHHHHHHhCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666777799999999999999999999999999999999999999999999999987 555566667778999999
Q ss_pred HHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 008499 100 SFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHA 176 (563)
Q Consensus 100 ~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~~~~ 176 (563)
.+++.+|++.++ ..+++|+|++|++||.+++. ++ ++++++||+||+|+|.++|+++..
T Consensus 81 ~~~~~~gi~~~~~~~~~~~p~~~~y~~~l~~~a~~~~-------------------~~~~l~al~pc~~~Y~~~~~~~~~ 141 (210)
T PF03070_consen 81 DFAEELGISREDLENIEPSPATRAYTDFLLSLAQTGS-------------------LAEGLAALLPCEWIYAEIGKRLAE 141 (210)
T ss_dssp HHHHHTTSHHHHHHHSTC-HHHHHHHHHHHHHHHHSS-------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHhhhhhhHHHHHHHHHHHHhccCC-------------------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999974 67899999999999999985 54 378999999999999999999987
Q ss_pred hccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 177 LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 177 ~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
... ..++++|++||+.|++++|.+.+.++.+++|+++..++++++++++++|+++|++|++||+++
T Consensus 142 ~~~-~~~~~~y~~wi~~y~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~E~~Fwd~a 207 (210)
T PF03070_consen 142 KLR-APEDNPYQEWIDMYASEEFEAFVEWLEELLDELAAEASDEERERLEEIFRRSCELEYDFWDAA 207 (210)
T ss_dssp HCS-TTSSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-CCCCccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 653 347889999999999999999999999999999988899999999999999999999999998
|
In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase []. The THI-4 protein, which is involved in thiamine biosynthesis, also contains this domain. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4 []. The exact molecular function of this domain is uncertain.; PDB: 2RD3_D 3RM5_B 1UDD_D 1Z72_B 3HML_A 3HLX_A 3HNH_A 3DDE_B 3OQL_A 2A6B_A .... |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=237.32 Aligned_cols=227 Identities=18% Similarity=0.268 Sum_probs=183.4
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+++++||+|||.|||+.-+ .++.+.. +||++.+..+.+++.|.++..+++++|+|+|.++
T Consensus 20 ~~~lqvisDFD~Tlt~~~~--------~~g~~~~------------s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~ 79 (277)
T TIGR01544 20 AAKLQIISDFDYTLSRFSY--------EDGKRCP------------TCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDP 79 (277)
T ss_pred hhheEEeeccCccceeeec--------CCCCCCc------------chHhHHhhCCCCCHHHHHHHHHHHhhccceecCC
Confidence 4899999999999998632 1223332 5677888888899999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccCh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~ 418 (563)
.++.+++.++ |.|||.++++.+++. +++++++.++.+ ++.++||+.+|++.|+++| +|++|+|+|+ .
T Consensus 80 ~~~~~eK~~~---m~eWw~k~~~l~~~~----~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~G---Ipv~IvS~G~-~ 148 (277)
T TIGR01544 80 VLTVEEKYPY---MVEWWTKSHGLLVQQ----AFPKAKIKEIVAESDVMLKDGYENFFDKLQQHS---IPVFIFSAGI-G 148 (277)
T ss_pred CCChHHhhhH---HHHHHHHHHHHHhcC----CCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCC---CcEEEEeCCc-H
Confidence 9999999998 569999999999874 569999999987 8999999999999999999 9999999997 8
Q ss_pred HhhHHHHhC-CC--CcceEEeeccEec-CccccCcccccCCCCCCcHHHHHH-HHHHhC-CCCCccEEEEcCCcCchHHh
Q 008499 419 DLIRASFSS-GL--NALNVHANEFSFK-ESISTGEIIEKVESPIDKVQAFNN-TLEKYG-TDRKNLSVYIGDSVGDLLCL 492 (563)
Q Consensus 419 ~~I~~~L~~-~l--~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~~l~~-~~~~~~-~~~~~~viyiGDs~~Dl~~l 492 (563)
.+|+.+|++ ++ .+++|+||+|.|+ +|.++| +.+++....+|.+.+.+ ..+..+ .-.+.++|++|||.||+.|.
T Consensus 149 ~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma 227 (277)
T TIGR01544 149 NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMA 227 (277)
T ss_pred HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHh
Confidence 999999997 66 5679999999996 689999 66677778899876654 333333 12357899999999999997
Q ss_pred hhc-C---c-cEEEcCC---hhHHHHHHhhCCeee
Q 008499 493 LEA-D---I-GIVIGSS---SSLRRVGSQFGVTFI 519 (563)
Q Consensus 493 ~~A-d---~-givi~~~---~~L~~~~~~~gi~~~ 519 (563)
.-. . + .|.|-+. ..|.+|.+.+.|-++
T Consensus 228 ~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 228 DGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred cCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 765 1 1 2222222 467778888877554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=214.29 Aligned_cols=207 Identities=20% Similarity=0.313 Sum_probs=184.3
Q ss_pred chHHHHHHHH--hHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008499 14 EGLARRLWIK--FKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (563)
Q Consensus 14 ~~~~~~lw~~--~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (563)
+.|...+... ..+.|...++|+|+.+++.|||+...|..||.|||+||-+|+|+++....+.+..++++.-......+
T Consensus 309 g~f~~yl~~hpkv~p~W~s~inh~fv~~~~~Gtl~~~~fq~~l~qdy~ylIn~ara~~v~g~ks~~i~~ie~~~~iv~~v 388 (523)
T KOG2598|consen 309 GSFFNYLINHPKVKPKWDSYINHEFVKQLADGTLERKKFQDYLEQDYLYLINYARAHGVAGSKSPTIEDIEKEAVIVQHV 388 (523)
T ss_pred HHHHHHHhhCcccChhHHHHhhHHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHHHhhhcccCCcHHHHHHHhHHHHHH
Confidence 5677777654 36678888999999999999999999999999999999999999999999999999887777777778
Q ss_pred HHHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 92 LEELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 92 ~~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
.+|+.+|.++++.+|++..+ ...+.|++++|.+|+..+++++. .+++..|+.| |.+
T Consensus 389 ~~e~~~h~~l~e~~Gv~~~d~~~~~~~pa~~Aysry~~d~~~~g~------------------~~~l~~a~~p----y~~ 446 (523)
T KOG2598|consen 389 REELVQHVRLREEYGVSDPDYLSCKKGPALRAYSRYINDTGRRGN------------------WQELVIALNP----YVF 446 (523)
T ss_pred HhhccchHHHHHHhCCCchhhhhcCccHHHHHHHHHhhhhhcccC------------------hhhhhhhhch----hhH
Confidence 89999999999999999874 44559999999999999997443 2567999999 888
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
+..++.... .+.++.+|.+|+++|++.++...++.....++......++++.+.+..+|.++|++|..||+.+
T Consensus 447 ~l~~lk~~~-~as~g~vy~~w~e~~~~~~~~~ai~~g~~~l~~i~~~~~pe~~~~l~~i~~~~~~~Et~fw~t~ 519 (523)
T KOG2598|consen 447 ALDKLKDEI-TASEGSVYVEWVETYSSSWYTSAIDEGERLLEHIVETLSPEKLQTLVTIFARVTEFETLFWTTA 519 (523)
T ss_pred HHHHHHhhc-ccCCCCceeehhhhccchhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 888887765 3557899999999999999999999999999999999999999999999999999999999988
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=192.30 Aligned_cols=204 Identities=19% Similarity=0.267 Sum_probs=149.3
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
++.+|++|||||||.+|+...|..-. ...+|+.+.+..+.+-
T Consensus 2 kk~vi~sDFDGTITl~Ds~~~itdtf-----------------------~~~e~k~l~~~vls~t--------------- 43 (220)
T COG4359 2 KKPVIFSDFDGTITLNDSNDYITDTF-----------------------GPGEWKALKDGVLSKT--------------- 43 (220)
T ss_pred CceEEEecCCCceEecchhHHHHhcc-----------------------CchHHHHHHHHHhhCc---------------
Confidence 56799999999999999998877633 3467776666543332
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc-cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
++..+-. .+|..+ =+.+.+++.+... ++.++|||++|++++++++ +|++|||+|. ..|
T Consensus 44 iS~rd~~--------------g~mf~~---i~~s~~Eile~llk~i~Idp~fKef~e~ike~d---i~fiVvSsGm-~~f 102 (220)
T COG4359 44 ISFRDGF--------------GRMFGS---IHSSLEEILEFLLKDIKIDPGFKEFVEWIKEHD---IPFIVVSSGM-DPF 102 (220)
T ss_pred eeHHHHH--------------HHHHHh---cCCCHHHHHHHHHhhcccCccHHHHHHHHHHcC---CCEEEEeCCC-chH
Confidence 2222211 122221 1336666666654 6999999999999999999 9999999995 889
Q ss_pred hHHHHhC--C---CCcceEEeeccEecC-ccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh
Q 008499 421 IRASFSS--G---LNALNVHANEFSFKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 494 (563)
Q Consensus 421 I~~~L~~--~---l~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~ 494 (563)
|...|++ | +..++|++|+..++. |-..=...+....|.||...++++.+. +..++|+|||++|+.+++.
T Consensus 103 I~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI~~l~e~-----~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 103 IYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVIHELSEP-----NESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred HHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhHHHhhcC-----CceEEEecCCcccccHhhh
Confidence 9999987 2 445677777777653 311111123467899999999998874 4569999999999999999
Q ss_pred cCccEEEcCChhHHHHHHhhCCeeeecCc--hhHHhHHhh
Q 008499 495 ADIGIVIGSSSSLRRVGSQFGVTFIPLYP--GLVKKQKEY 532 (563)
Q Consensus 495 Ad~givi~~~~~L~~~~~~~gi~~~p~~~--~~~~~~~~~ 532 (563)
+| ++|+ +..|..+|++++++|+||++ .+++.++.+
T Consensus 178 sD--llFA-K~~L~nyc~eqn~~f~~fe~F~eIlk~iekv 214 (220)
T COG4359 178 SD--LLFA-KDDLLNYCREQNLNFLEFETFYEILKEIEKV 214 (220)
T ss_pred hh--hHhh-HHHHHHHHHHcCCCCcccccHHHHHHHHHHH
Confidence 99 5675 56899999999999999986 455544443
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.1e-24 Score=206.22 Aligned_cols=199 Identities=22% Similarity=0.208 Sum_probs=161.7
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+.+.+++||||+|+|...+++.+++.+. .......++...+..+
T Consensus 3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g----------------------~~~~v~~~t~~~~~~~-------------- 46 (212)
T COG0560 3 RMKKLAVFDLDGTLINAELIDELARGAG----------------------VGEEVLAITERAMRGE-------------- 46 (212)
T ss_pred CccceEEEecccchhhHHHHHHHHHHhC----------------------CHHHHHHHHHHHhccc--------------
Confidence 4677999999999999888888777552 2334444444332222
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhcc-CCCCchHHHHHHHHHHcCCCCCcEEEEccccChH
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~-i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~ 419 (563)
.+|.+.++ .++ .+++|++.+.+.+..++ +.++||+.++++++++.| +.++|||+|+ ..
T Consensus 47 -------~~~~~~~~-------~~v---~~l~g~~~~~v~~~~~~~~~l~~ga~elv~~lk~~G---~~v~iiSgg~-~~ 105 (212)
T COG0560 47 -------LDFEESLR-------LRV---ALLKGLPVEVLEEVREEFLRLTPGAEELVAALKAAG---AKVVIISGGF-TF 105 (212)
T ss_pred -------ccHHHHHH-------HHH---HHhCCCCHHHHHHHHHhcCcCCccHHHHHHHHHHCC---CEEEEEcCCh-HH
Confidence 22323232 234 67899999999999999 999999999999999999 9999999996 44
Q ss_pred hhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 420 LIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 420 ~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
+++. +.+.++..+++||+++.++|++||.+.++++.+.+|..+++++.++.+.+ ...+++||||.||++||..||.|+
T Consensus 106 lv~~-ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~i 183 (212)
T COG0560 106 LVEP-IAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIP-LEETVAYGDSANDLPMLEAAGLPI 183 (212)
T ss_pred HHHH-HHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCCCe
Confidence 5554 44444457899999999988999999999999999999999999988764 468999999999999999999999
Q ss_pred EEcCChhHHHHHHhhCCee
Q 008499 500 VIGSSSSLRRVGSQFGVTF 518 (563)
Q Consensus 500 vi~~~~~L~~~~~~~gi~~ 518 (563)
++++++.|.+.++..+++.
T Consensus 184 a~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 184 AVNPKPKLRALADVRIWPI 202 (212)
T ss_pred EeCcCHHHHHHHHHhcChh
Confidence 9999999999999999865
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-22 Score=196.32 Aligned_cols=193 Identities=18% Similarity=0.192 Sum_probs=139.5
Q ss_pred EEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccCCCH
Q 008499 265 IIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNY 344 (563)
Q Consensus 265 ~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~~~~ 344 (563)
+|+||||||||..||+..+++.. ..+.|..+...++.+- +++
T Consensus 1 ~~~fDFDgTit~~d~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~---------------~~~ 42 (214)
T TIGR03333 1 FIICDFDGTITNNDNIISIMKQF-----------------------APPEWEALKDGVLSKT---------------LSI 42 (214)
T ss_pred CEEeccCCCCCcchhHHHHHHHh-----------------------CcHHHHHHHHHHHcCC---------------ccH
Confidence 48999999999999987776622 2356766665544321 233
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHh-ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHH
Q 008499 345 ETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 423 (563)
Q Consensus 345 ~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~-~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~ 423 (563)
.+... ++. ..++.-..+++.++. +.+.++||+.++++.++++| ++++|+|+|. ..+|+.
T Consensus 43 ~e~~~--------------~~~--~~~~~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~~i~~ 102 (214)
T TIGR03333 43 QEGVG--------------RMF--GLLPSSLKEEITSFVLETAEIREGFREFVAFINEHG---IPFYVISGGM-DFFVYP 102 (214)
T ss_pred HHHHH--------------HHH--hhCCCchHHHHHHHHHhcCcccccHHHHHHHHHHCC---CeEEEECCCc-HHHHHH
Confidence 32211 111 222222345676654 46899999999999999988 9999999994 789999
Q ss_pred HHhCCCCcceEEeeccEecCccccCcccc------cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 424 SFSSGLNALNVHANEFSFKESISTGEIIE------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 424 ~L~~~l~~~~I~aN~l~~~~g~~tG~~~~------~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
+++.-.....|+||++.++++..++.... ...+|.||..+++++... +.+++|||||.||++++..||+
T Consensus 103 il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~-----~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 103 LLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEP-----NDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHHhhc-----CCcEEEEeCCHHHHHHHHhCCe
Confidence 88762123679999999987654443321 123488999999987642 4679999999999999999994
Q ss_pred cEEEcCChhHHHHHHhhCCeeeecCc
Q 008499 498 GIVIGSSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 498 givi~~~~~L~~~~~~~gi~~~p~~~ 523 (563)
+++ +..|..+|++.|++++|+.+
T Consensus 178 --~~a-r~~l~~~~~~~~~~~~~~~~ 200 (214)
T TIGR03333 178 --CFA-RDYLLNECEELGLNHAPFQD 200 (214)
T ss_pred --eEe-hHHHHHHHHHcCCCccCcCC
Confidence 554 33688999999999999975
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-21 Score=201.40 Aligned_cols=192 Identities=19% Similarity=0.204 Sum_probs=153.3
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+.+.+++||||||++..++++.+++.. + ....+..+++.++.+
T Consensus 108 ~~~~LvvfDmDGTLI~~e~i~eia~~~-----g-----------------~~~~v~~it~~~m~G--------------- 150 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQIECIDEIAKLA-----G-----------------TGEEVAEVTERAMRG--------------- 150 (322)
T ss_pred cCCCEEEEECCCCCcchHHHHHHHHHh-----C-----------------CchHHHHHHHHHHcC---------------
Confidence 467799999999999999999988855 1 344566666654332
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
+++|.++++ .++ ..++|.+.+.+.+..+.+++.||+.++++.|+++| +++.|+|+|+ ..+
T Consensus 151 ------eldf~esl~-------~rv---~~l~g~~~~il~~v~~~l~l~pGa~elL~~Lk~~G---~~~aIvSgg~-~~~ 210 (322)
T PRK11133 151 ------ELDFEASLR-------QRV---ATLKGADANILQQVRENLPLMPGLTELVLKLQALG---WKVAIASGGF-TYF 210 (322)
T ss_pred ------CcCHHHHHH-------HHH---HHhCCCCHHHHHHHHHhCCCChhHHHHHHHHHHcC---CEEEEEECCc-chh
Confidence 222333332 234 35688887777777778999999999999999999 9999999996 567
Q ss_pred hHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 421 IRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 421 I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
++..++. ++..++++|.+++.+|..||.+.+.+..+..|...++++.+..+.+ ..++|+||||.||++|+..||+||+
T Consensus 211 ~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 211 ADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEIP-LAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCCC-hhhEEEEECCHHHHHHHHHCCCeEE
Confidence 7766554 3346899999999999999998887778889999999999888763 5789999999999999999999999
Q ss_pred EcCChhHHHHH
Q 008499 501 IGSSSSLRRVG 511 (563)
Q Consensus 501 i~~~~~L~~~~ 511 (563)
+++++.+++.+
T Consensus 289 ~nAkp~Vk~~A 299 (322)
T PRK11133 289 YHAKPKVNEQA 299 (322)
T ss_pred eCCCHHHHhhC
Confidence 99999988655
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-21 Score=189.30 Aligned_cols=196 Identities=19% Similarity=0.195 Sum_probs=139.5
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
++.+|+||||||||..|+...+++-. ..+.|..+.+.|+++.
T Consensus 2 ~~~~vifDfDgTi~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~g~--------------- 43 (219)
T PRK09552 2 MSIQIFCDFDGTITNNDNIIAIMKKF-----------------------APPEWEELKDDILSQE--------------- 43 (219)
T ss_pred CCcEEEEcCCCCCCcchhhHHHHHHh-----------------------CHHHHHHHHHHHHhCC---------------
Confidence 35699999999999999976544321 1245777766664432
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHh-ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~-~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
+.+.+- +. ++. ..+.+...+++.+.. +++.++||+.++++.++++| +++.|+|+|+ ..+
T Consensus 44 ~~~~~~------~~--------~~~--~~l~~~~~~~~~~~~~~~~~l~pG~~e~l~~l~~~g---~~~~IvS~~~-~~~ 103 (219)
T PRK09552 44 LSIQEG------VG--------QMF--QLLPSNLKEEIIQFLLETAEIREGFHEFVQFVKENN---IPFYVVSGGM-DFF 103 (219)
T ss_pred cCHHHH------HH--------HHH--HhCCCCchHHHHHHHHhCCCcCcCHHHHHHHHHHcC---CeEEEECCCc-HHH
Confidence 222211 11 111 223444456676654 57899999999999999999 9999999996 889
Q ss_pred hHHHHhCCCCcceEEeeccEecCccccCcccccC------CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh
Q 008499 421 IRASFSSGLNALNVHANEFSFKESISTGEIIEKV------ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 494 (563)
Q Consensus 421 I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~------~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~ 494 (563)
|+.+|++-+....|+||.+.++++..+.....+. .++.+|..+++++.. .+.++||||||.+|+++++.
T Consensus 104 i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~-----~~~~~i~iGDs~~Di~aa~~ 178 (219)
T PRK09552 104 VYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSD-----TNDFHIVIGDSITDLEAAKQ 178 (219)
T ss_pred HHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhcc-----CCCCEEEEeCCHHHHHHHHH
Confidence 9998876333467999999887654333222111 246789988887653 24689999999999999999
Q ss_pred cCccEEEcCChhHHHHHHhhCCeeeecCc
Q 008499 495 ADIGIVIGSSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 495 Ad~givi~~~~~L~~~~~~~gi~~~p~~~ 523 (563)
||+ +++ ...|.++|+++|++++|+.+
T Consensus 179 Ag~--~~a-~~~l~~~~~~~~~~~~~~~~ 204 (219)
T PRK09552 179 ADK--VFA-RDFLITKCEELGIPYTPFET 204 (219)
T ss_pred CCc--cee-HHHHHHHHHHcCCCccccCC
Confidence 985 444 44788999999999999975
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-21 Score=187.93 Aligned_cols=227 Identities=16% Similarity=0.255 Sum_probs=171.1
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccc-cHhHhHHHHHHHHHHHHhhcCCCccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRN-TWGLLSKQYTEEYEQCIESFMPSEKV 339 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~l~~~y~~~~~~~~~~~~p~~~~ 339 (563)
+.++++|+|||.|||++-|- .++++++ ++.+.+ ..+.+...|.++..+++.+|+|+|.+
T Consensus 36 a~~~~vIsdfd~TLSrfa~~--------~G~r~pS------------~~~Vfd~~~~~~~~e~~~k~~~LyhkY~PIEid 95 (298)
T KOG3128|consen 36 AGKLQVISDFDYTLSRFATE--------QGKRCPS------------CFGVFDDNVKRLKPECRAKFVALYHKYYPIEID 95 (298)
T ss_pred ccceeEeecCchhHHHHHHh--------hcCcCCc------------cccchhhhhhcCCHHHHHHHHHHHhhccCcccC
Confidence 68999999999999975221 2455554 344555 67778889999999999999999999
Q ss_pred cCCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccC
Q 008499 340 ENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC 417 (563)
Q Consensus 340 ~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws 417 (563)
+.++++++.+++ .|||.+||+.+++ .|+++.+|++.+. ++.||+|+.+|+..|++++ +|+.|+|+|.
T Consensus 96 P~ltieEKvp~M---eeWW~kSH~Lliq----~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~---IP~~iFSAGi- 164 (298)
T KOG3128|consen 96 PVLTIEEKVPHM---EEWWTKSHELLIQ----GGFSKNAIDDIVAESNIALREGYEEFFEALQAHE---IPLLIFSAGI- 164 (298)
T ss_pred CCCChhhhchHH---HHHHhcccceeec----CCcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CceEEEecch-
Confidence 999999999985 5999999999987 4679999999877 6899999999999999999 9999999996
Q ss_pred hHhhHHHHhC--C-CCcceEEeeccEecC-ccccCcccccCCCCCCcHH-HHHHHHHHhC-CCCCccEEEEcCCcCchHH
Q 008499 418 GDLIRASFSS--G-LNALNVHANEFSFKE-SISTGEIIEKVESPIDKVQ-AFNNTLEKYG-TDRKNLSVYIGDSVGDLLC 491 (563)
Q Consensus 418 ~~~I~~~L~~--~-l~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K~~-~l~~~~~~~~-~~~~~~viyiGDs~~Dl~~ 491 (563)
++.|+.++++ + .++.+++||-+.|++ |...| |..++....+|.. +++.-..... ...+.++|+.|||.+|+.|
T Consensus 165 gdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~g-F~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~m 243 (298)
T KOG3128|consen 165 GDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCG-FSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHM 243 (298)
T ss_pred HHHHHHHHHHHhccCccHHhhhhhhhhcccchhhh-hhHHHHHHHccchHHHHhhhHHHhhccCCceEEEeccccccchh
Confidence 9999999988 3 468899999999984 54343 3333333344432 2222111111 1235789999999999999
Q ss_pred hhhc-Cc------cEEEc-CChhHHHHHHhhCCeee
Q 008499 492 LLEA-DI------GIVIG-SSSSLRRVGSQFGVTFI 519 (563)
Q Consensus 492 l~~A-d~------givi~-~~~~L~~~~~~~gi~~~ 519 (563)
...+ ++ |+... -...+.+|.+.+.|-.+
T Consensus 244 a~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~ 279 (298)
T KOG3128|consen 244 ADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLV 279 (298)
T ss_pred hcCCcccccceeeecccchHHHHHHHHHhhcceEEe
Confidence 8875 22 22222 11467788888877544
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=190.62 Aligned_cols=199 Identities=21% Similarity=0.369 Sum_probs=143.5
Q ss_pred CcccccccHhHhHHHHHHHHHHHHhhcCCCccccCCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc--
Q 008499 307 SSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-- 384 (563)
Q Consensus 307 ~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-- 384 (563)
+||++....+.+++.|.++..+++++|+|+|.++.++.+++.++ |.|||.++|+.+++. |+++++|.++++
T Consensus 15 sshgil~~~~~~~~~~~~k~~~L~~kY~PIE~dp~~s~eEK~p~---M~EWw~kah~llv~~----~l~k~~i~~~V~~s 87 (246)
T PF05822_consen 15 SSHGILENSKLLPEEYRKKLKELFEKYYPIEIDPTMSIEEKIPH---MEEWWTKAHELLVEQ----GLTKSEIEEAVKES 87 (246)
T ss_dssp -HHHHHHTSTTS-HHHHHHHHHHHHHHHHHHT-SSS-HHHHHHH---HHHHHHHHHHHHHHH----T-BGGGHHHHHHCS
T ss_pred ChHHHHhcCCcCCHHHHHHHHHHHhhccccccCCCCCHHHHHHH---HHHHHHHHHHHHHhc----CcCHHHHHHHHHhc
Confidence 46777777788999999999999999999999999999999987 569999999999986 469999999887
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-C--CCcceEEeeccEecC-ccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-G--LNALNVHANEFSFKE-SISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~--l~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K 460 (563)
++.||+|+.+||+.|.+++ +|+.|+|+|. +++|+.+|++ + .++++|+||.|.||+ |...| |.+++....+|
T Consensus 88 ~i~LRdg~~~~f~~L~~~~---IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~g-F~~~lIH~~NK 162 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHN---IPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVG-FKGPLIHTFNK 162 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT-----EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEE-E-SS---TT-H
T ss_pred chhhhcCHHHHHHHHHhcC---CCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEee-cCCCceEEeeC
Confidence 6899999999999999988 9999999996 9999999998 4 478999999999974 77766 56677777788
Q ss_pred HH-HHH--HHHHHhCCCCCccEEEEcCCcCchHHhhhc-Cc------cEEEcC-ChhHHHHHHhhCCeee
Q 008499 461 VQ-AFN--NTLEKYGTDRKNLSVYIGDSVGDLLCLLEA-DI------GIVIGS-SSSLRRVGSQFGVTFI 519 (563)
Q Consensus 461 ~~-~l~--~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A-d~------givi~~-~~~L~~~~~~~gi~~~ 519 (563)
.. ++. .+.+. ...+.+++.+|||.+|+.|..-. +. |++-.. ...|.+|.+.+.|-++
T Consensus 163 n~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv 230 (246)
T PF05822_consen 163 NESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLV 230 (246)
T ss_dssp HHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEE
T ss_pred CcccccCchHHHH--hccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEE
Confidence 75 331 22222 22467899999999999998766 33 222221 1357888888876544
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.9e-20 Score=180.55 Aligned_cols=129 Identities=19% Similarity=0.266 Sum_probs=101.2
Q ss_pred CCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecC-cccc
Q 008499 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKE-SIST 447 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~-g~~t 447 (563)
.|++.++|.+..+.+++.||+.++++.+.++. .+.+++|||++ ...||+.+|++ |+.. .+|++|...|++ |.+.
T Consensus 56 ~gvt~~~I~~~l~~ip~~pgm~~~l~~l~~~~-~~~~~~IiSDa-Ns~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~ 133 (234)
T PF06888_consen 56 QGVTPEDIRDALRSIPIDPGMKELLRFLAKNQ-RGFDLIIISDA-NSFFIETILEHHGLRDCFSEIFTNPACFDADGRLR 133 (234)
T ss_pred cCCCHHHHHHHHHcCCCCccHHHHHHHHHhcC-CCceEEEEeCC-cHhHHHHHHHhCCCccccceEEeCCceecCCceEE
Confidence 47899999999999999999999999996521 23999999999 68999999998 7754 389999999975 5422
Q ss_pred -Cccc---cc-CCCCCCcHHHHHHHHHHhCC--CCCccEEEEcCCcCchHHhhh---cCccEEEcCC
Q 008499 448 -GEII---EK-VESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDLLCLLE---ADIGIVIGSS 504 (563)
Q Consensus 448 -G~~~---~~-~~~g~~K~~~l~~~~~~~~~--~~~~~viyiGDs~~Dl~~l~~---Ad~givi~~~ 504 (563)
.++. ++ +..++||..+|++++..... ..+.++||||||.||+|+++. .| +|+..+
T Consensus 134 v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D--~v~~R~ 198 (234)
T PF06888_consen 134 VRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRD--VVFPRK 198 (234)
T ss_pred EeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCC--EEecCC
Confidence 2222 23 23347999999999986411 135799999999999999986 67 677543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.82 E-value=9e-20 Score=172.59 Aligned_cols=171 Identities=22% Similarity=0.254 Sum_probs=126.8
Q ss_pred EEeeccccceecccc-hHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccCCC
Q 008499 265 IIFSDFDLTCTIVDS-SAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFN 343 (563)
Q Consensus 265 ~ii~DFD~TiT~~Dt-~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~~~ 343 (563)
+++||||||||..|| ...+.+.. + ..+.|..+.+.|+.+.. +
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~-----~-----------------~~~~~~~~~~~~~~g~i---------------~ 43 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLL-----G-----------------TNDEVIELTRLAPSGRI---------------S 43 (177)
T ss_pred CEEecCccccccchhhHHHHHHHh-----C-----------------ChHHHHHHHHHHHCCCC---------------C
Confidence 489999999999999 55555433 1 12455566665544321 2
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHH-H-hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhh
Q 008499 344 YETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK-A-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI 421 (563)
Q Consensus 344 ~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~-~-~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I 421 (563)
+.+ .+. +. ...+++...+++.+ + .+.+.++||+.++++.++++| ++++|+|+|. ..+|
T Consensus 44 ~~~------~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~i 103 (177)
T TIGR01488 44 FED------ALG--------RR--LALLHRSRSEEVAKEFLARQVALRPGARELISWLKERG---IDTVIVSGGF-DFFV 103 (177)
T ss_pred HHH------HHH--------HH--HHHhCCCCHHHHHHHHHHhcCCcCcCHHHHHHHHHHCC---CEEEEECCCc-HHHH
Confidence 221 121 11 24557777566665 5 457889999999999999998 9999999995 7889
Q ss_pred HHHHhC-CCCcceEEeeccEec-CccccCcccc-cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 422 RASFSS-GLNALNVHANEFSFK-ESISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 422 ~~~L~~-~l~~~~I~aN~l~~~-~g~~tG~~~~-~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
+.+++. ++. ++++|++.++ +|..+|++.+ .++.+.+|...++++....+.+ +.+++|||||.||++|++.|
T Consensus 104 ~~~~~~~g~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 104 EPVAEKLGID--DVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHcCCc--hheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 988876 653 7999999996 6788888765 5677899999999998776542 46899999999999999865
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=173.80 Aligned_cols=131 Identities=12% Similarity=0.098 Sum_probs=106.7
Q ss_pred hhccCCCCHHHHHHHhc--------cCCCCchHHHHHH-HHHHcCCCCCcEEEEccccChHhhHHHHhC-C-CCcceEEe
Q 008499 368 SGVLKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSS-G-LNALNVHA 436 (563)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~--------~i~lrpG~~efl~-~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~-l~~~~I~a 436 (563)
...|+|++.+++.+..+ ...++||+.+.++ .++++| ++++|||++. ..+++.+.+. + ++.++++|
T Consensus 67 ~~~~~g~~~~~l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G---~~v~IvSas~-~~~~~~ia~~~~~~~~~~~i~ 142 (210)
T TIGR01545 67 WACTFGHREAHLQDLEADFVAAFRDKVTAFPLVAERLRQYLESSD---ADIWLITGSP-QPLVEAVYFDSNFIHRLNLIA 142 (210)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCC---CEEEEEcCCc-HHHHHHHHHhccccccCcEEE
Confidence 46788999988876543 2468999999997 566678 9999999983 6667766654 3 35578999
Q ss_pred eccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHH
Q 008499 437 NEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 509 (563)
Q Consensus 437 N~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~ 509 (563)
+++++.+| |.+.+.+|.|..|++++++++.. ....++++|||.||++||..||.++++++++.|++
T Consensus 143 t~le~~~g---g~~~g~~c~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~ 208 (210)
T TIGR01545 143 SQIERGNG---GWVLPLRCLGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQ 208 (210)
T ss_pred EEeEEeCC---ceEcCccCCChHHHHHHHHHhCC----ChhheEEecCCcccHHHHHhCCCcEEECcchHhcc
Confidence 99998655 77778899999999999998842 23567899999999999999999999999988874
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-19 Score=173.28 Aligned_cols=136 Identities=23% Similarity=0.308 Sum_probs=114.6
Q ss_pred ccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccC
Q 008499 370 VLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTG 448 (563)
Q Consensus 370 ~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG 448 (563)
.|.+.+.+.+.+..+.+.++||+.++++.++++| ++++|||+|+ ..+++.+++. ++ .++++|.+.++++.++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~~i--~~~~~~~~~~~~~~~~~ 141 (219)
T TIGR00338 68 LLKGLPVELLKEVRENLPLTEGAEELVKTLKEKG---YKVAVISGGF-DLFAEHVKDKLGL--DAAFANRLEVEDGKLTG 141 (219)
T ss_pred HhCCCCHHHHHHHHhcCCcCCCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCC--CceEeeEEEEECCEEEE
Confidence 3467788888888888999999999999999988 9999999995 7888888876 65 35899999998888888
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHH
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS 512 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~ 512 (563)
...+....+.+|...++.+++..+. .+.+++|||||.+|+.++..||+++++++++.+++.+.
T Consensus 142 ~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~ 204 (219)
T TIGR00338 142 LVEGPIVDASYKGKTLLILLRKEGI-SPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD 204 (219)
T ss_pred EecCcccCCcccHHHHHHHHHHcCC-CHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence 7766655666799999998887765 35789999999999999999999999998877776553
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-19 Score=166.70 Aligned_cols=191 Identities=18% Similarity=0.186 Sum_probs=147.4
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
.+-+++||.|+|++..+-|+.|+.... .......++.
T Consensus 15 ~~~aVcFDvDSTvi~eEgIdelA~~~G----------------------~~~~Va~~T~--------------------- 51 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEGIDELAAYCG----------------------VGEAVAEVTR--------------------- 51 (227)
T ss_pred hcCeEEEecCcchhHHhhHHHHHHHhC----------------------chHHHHHHHH---------------------
Confidence 445899999999999999999999773 2334444444
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHh--ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChH
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG--ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~--~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~ 419 (563)
..|.+..+|.++|+ .|+ .+|++ +.+++.+.. +...|.||..+|++.|+++| ..++++|+|| ..
T Consensus 52 rAMng~~~F~eaL~-------~Rl---~llqp-~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~---~~v~liSGGF-~~ 116 (227)
T KOG1615|consen 52 RAMNGEADFQEALA-------ARL---SLLQP-LQVQVEQFVIKQKPTLTPGIRELVSRLHARG---TQVYLISGGF-RQ 116 (227)
T ss_pred HHhCCCCcHHHHHH-------HHH---HHhcc-cHHHHHHHHhcCCCccCCCHHHHHHHHHHcC---CeEEEEcCCh-HH
Confidence 24777778888887 355 68888 456666654 37899999999999999999 9999999998 77
Q ss_pred hhHHHHhC-CCCcceEEeeccEec-CccccC-cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 420 LIRASFSS-GLNALNVHANEFSFK-ESISTG-EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 420 ~I~~~L~~-~l~~~~I~aN~l~~~-~g~~tG-~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
+|..+-.. |++..+|+||.|.|+ +|.++| ....+...+.+|..++..+++.++ ...+++||||.||++|+.-||
T Consensus 117 ~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk~~~---~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 117 LIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNYN---YKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred HHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHhCCC---hheeEEecCCccccccCCchh
Confidence 88887666 888788999999997 477777 555677888899999999988543 467889999999999999987
Q ss_pred ccEEEcCChhHHHHHHhh
Q 008499 497 IGIVIGSSSSLRRVGSQF 514 (563)
Q Consensus 497 ~givi~~~~~L~~~~~~~ 514 (563)
.-+.++ +..+++-++.+
T Consensus 194 afi~~~-g~~~r~~vk~n 210 (227)
T KOG1615|consen 194 AFIGFG-GNVIREGVKAN 210 (227)
T ss_pred hhhccC-CceEcHhhHhc
Confidence 433343 33444444333
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=166.16 Aligned_cols=132 Identities=20% Similarity=0.165 Sum_probs=112.3
Q ss_pred hhccCCCCHHHHHHHhcc-------CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeecc
Q 008499 368 SGVLKGINLEDIKKAGER-------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEF 439 (563)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~-------i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l 439 (563)
...|+|++.+++.+.++. ..++||+.++++.++++| ++++|+|+++ ..+++.+++. ++ .++++|++
T Consensus 61 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~v~ivS~s~-~~~v~~~~~~lg~--~~~~~~~l 134 (202)
T TIGR01490 61 LDALAGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEG---HTIVLVSASL-TILVKPLARILGI--DNAIGTRL 134 (202)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHcCC--cceEecce
Confidence 356799999999887653 468999999999999998 9999999995 7788877765 54 56899999
Q ss_pred Ee-cCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChh
Q 008499 440 SF-KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 506 (563)
Q Consensus 440 ~~-~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~ 506 (563)
.+ ++|.+||++.++.+.+..|...+++++++.+.+ ...+++||||.+|++|+..|+.++++.+++.
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~ 201 (202)
T TIGR01490 135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVVNPDKK 201 (202)
T ss_pred EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEeCCCCC
Confidence 98 678899998877888999999999998876652 4689999999999999999999999987754
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=168.81 Aligned_cols=128 Identities=20% Similarity=0.247 Sum_probs=109.6
Q ss_pred CCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-ccccCc
Q 008499 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-SISTGE 449 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~ 449 (563)
.|++.+++.+..+.+.++||+.++++.++++ .+++|||+|+ ..+++.+++. |+ .+++||++.+++ |.+||.
T Consensus 53 ~g~~~~~i~~~~~~i~l~pga~ell~~lk~~----~~~~IVS~~~-~~~~~~il~~lgi--~~~~an~l~~~~~g~~tG~ 125 (203)
T TIGR02137 53 HGLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGF--PTLLCHKLEIDDSDRVVGY 125 (203)
T ss_pred CCCCHHHHHHHHHhCCCCccHHHHHHHHHhC----CeEEEEeCCh-HHHHHHHHHHcCC--chhhceeeEEecCCeeECe
Confidence 4999999999999999999999999999985 3899999996 7788888776 65 479999999988 888886
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhh
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQF 514 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~ 514 (563)
.. ..+.+|..+++.+.. . +.++++||||.||++|+..||+||++++++.+++.+..+
T Consensus 126 ~~---~~~~~K~~~l~~l~~-~----~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~ 182 (203)
T TIGR02137 126 QL---RQKDPKRQSVIAFKS-L----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQF 182 (203)
T ss_pred ee---cCcchHHHHHHHHHh-h----CCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCC
Confidence 43 346689999998853 2 247999999999999999999999999999999888554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.6e-17 Score=158.24 Aligned_cols=128 Identities=13% Similarity=0.068 Sum_probs=103.1
Q ss_pred cCCCCHHHHHHHhc--------cCCCCchHHHHHH-HHHHcCCCCCcEEEEccccChHhhHHHHhC-C-CCcceEEeecc
Q 008499 371 LKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSS-G-LNALNVHANEF 439 (563)
Q Consensus 371 f~Gi~~~~i~~~~~--------~i~lrpG~~efl~-~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~-l~~~~I~aN~l 439 (563)
+.|++.+++.+..+ .+.+.||+.+.++ .++++| ++++|+|++. ..+++.+++. + ...++++|+++
T Consensus 71 ~~g~~~~~~~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G---~~l~IvSas~-~~~~~~il~~l~~~~~~~~i~t~l 146 (211)
T PRK11590 71 TFGHSEARLQALEADFVRWFRDNVTAFPVVQERLTTYLLSSD---ADVWLITGSP-QPLVEQVYFDTPWLPRVNLIASQM 146 (211)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHccccccCceEEEEE
Confidence 34666666554432 2567999999995 566678 9999999984 7778877776 5 23578999999
Q ss_pred EecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHH
Q 008499 440 SFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 509 (563)
Q Consensus 440 ~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~ 509 (563)
++ .+||++.+.+|.|..|++++++++.. ....++++|||.||++||..|+.++++++++.|++
T Consensus 147 ~~---~~tg~~~g~~c~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~ 209 (211)
T PRK11590 147 QR---RYGGWVLTLRCLGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQ 209 (211)
T ss_pred EE---EEccEECCccCCChHHHHHHHHHhCC----CcceEEEecCCcccHHHHHhCCCCEEECccHHhhc
Confidence 77 58899999999999999999998841 23567899999999999999999999999988874
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.2e-17 Score=153.21 Aligned_cols=120 Identities=18% Similarity=0.192 Sum_probs=97.0
Q ss_pred CCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecC-ccccC
Q 008499 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKE-SISTG 448 (563)
Q Consensus 373 Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~-g~~tG 448 (563)
+++.+++.+..+++.++||+.++++.++++| ++++|+|++ ....++..+.. ++.. ..|+||++.+++ |..++
T Consensus 58 ~~~~~~~~~~~~~~~l~~g~~~ll~~l~~~g---~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~ 133 (188)
T TIGR01489 58 GLKEDEILEVLKSAPIDPGFKEFIAFIKEHG---IDFIVISDG-NDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIV 133 (188)
T ss_pred CCCHHHHHHHHHhCCCCccHHHHHHHHHHcC---CcEEEEeCC-cHHHHHHHHHHcCChhheeEEeccCceECCCCcEEE
Confidence 5677788888888999999999999999988 999999998 57888888876 6643 379999999975 55555
Q ss_pred cccc-----cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 449 EIIE-----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 449 ~~~~-----~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.... ....|.+|...+++++..+ +.++||||||.+|+++++.|| ++++
T Consensus 134 ~~~~~~~~~~~~~g~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d--~~~a 186 (188)
T TIGR01489 134 WPHHCHGCCSCPCGCCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSD--VVFA 186 (188)
T ss_pred ecCCCCccCcCCCCCCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCC--cccc
Confidence 3322 2446778999999887642 367999999999999999998 5664
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=154.35 Aligned_cols=132 Identities=19% Similarity=0.164 Sum_probs=105.5
Q ss_pred CCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-ccccCcc
Q 008499 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-SISTGEI 450 (563)
Q Consensus 373 Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~~ 450 (563)
....+++.+..+++.++||+.++++.++++| ++++|||+|+ ..+++.+++. |+ ..+++|.+.+++ |..++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~g~~e~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~g~--~~~~~~~~~~~~~g~~~p~~ 139 (201)
T TIGR01491 66 RLRREEVEEIFKEISLRDYAEELVRWLKEKG---LKTAIVSGGI-MCLAKKVAEKLNP--DYVYSNELVFDEKGFIQPDG 139 (201)
T ss_pred CCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHhCC--CeEEEEEEEEcCCCeEecce
Confidence 3466778777788999999999999999999 9999999995 7888988876 65 468899988864 5555431
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHH
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS 512 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~ 512 (563)
. ......+|...++++++..+.+ +.+++|||||.+|++|+..||+++++++++.|+++++
T Consensus 140 ~-~~~~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 140 I-VRVTFDNKGEAVERLKRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAK 199 (201)
T ss_pred e-eEEccccHHHHHHHHHHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhcc
Confidence 1 1123456888888888776653 4689999999999999999999999998888887775
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=151.04 Aligned_cols=184 Identities=17% Similarity=0.219 Sum_probs=130.7
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
..|++++||||.||.+.||..-+.+... .......+.++|-++
T Consensus 11 ~~ril~~FDFD~TIid~dSD~wVv~~lp----------------------~~~l~~qL~~t~p~~--------------- 53 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQDSDNWVVDELP----------------------TTDLFNQLRDTYPKG--------------- 53 (256)
T ss_pred CCcEEEEEecCceeecCCcchHHHHhcc----------------------cchhHHHHHHhcccc---------------
Confidence 4799999999999999999888777551 111223333333211
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
+|+....||.+.--=+|++.++|++..+.+++.||+.++++.+.+.|. .++.|||+. +..|
T Consensus 54 ----------------~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~lik~~ak~g~--~eliIVSDa-NsfF 114 (256)
T KOG3120|consen 54 ----------------FWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVRLIKSAAKLGC--FELIIVSDA-NSFF 114 (256)
T ss_pred ----------------hHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHHHHHHHHhCCC--ceEEEEecC-chhH
Confidence 223333333332112688999999999999999999999999999882 599999998 7899
Q ss_pred hHHHHhC-CCC--cceEEeeccEecC-ccccC-cc----cc-cCCCCCCcHHHHHHHHHHhCCC--CCccEEEEcCCcCc
Q 008499 421 IRASFSS-GLN--ALNVHANEFSFKE-SISTG-EI----IE-KVESPIDKVQAFNNTLEKYGTD--RKNLSVYIGDSVGD 488 (563)
Q Consensus 421 I~~~L~~-~l~--~~~I~aN~l~~~~-g~~tG-~~----~~-~~~~g~~K~~~l~~~~~~~~~~--~~~~viyiGDs~~D 488 (563)
|+.+|+. ++. ...|++|...++. |.+.= .+ ++ .+....||..+|.++....-.+ .+.++||+|||.||
T Consensus 115 Ie~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD 194 (256)
T KOG3120|consen 115 IEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGAND 194 (256)
T ss_pred HHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCC
Confidence 9999998 654 3489999999985 43211 11 22 3455689999999987643111 24589999999999
Q ss_pred hHHhhh---cCccEEEc
Q 008499 489 LLCLLE---ADIGIVIG 502 (563)
Q Consensus 489 l~~l~~---Ad~givi~ 502 (563)
+|+.+. .| +++.
T Consensus 195 ~CP~l~Lr~~D--~amp 209 (256)
T KOG3120|consen 195 FCPVLRLRACD--VAMP 209 (256)
T ss_pred cCcchhcccCc--eecc
Confidence 998776 45 5554
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.1e-16 Score=152.37 Aligned_cols=179 Identities=20% Similarity=0.205 Sum_probs=124.0
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
...+|+||||||||..|++..+++.. . ..+.|..+.+.|+.+.
T Consensus 11 ~~k~viFDfDGTL~~~~~~~~~~~~~-----g-----------------~~~~~~~~~~~~~~g~--------------- 53 (224)
T PLN02954 11 SADAVCFDVDSTVCVDEGIDELAEFC-----G-----------------AGEAVAEWTAKAMGGS--------------- 53 (224)
T ss_pred cCCEEEEeCCCcccchHHHHHHHHHc-----C-----------------ChHHHHHHHHHHHCCC---------------
Confidence 45688899999999999987777633 1 3345666655554331
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhcc--CCCCchHHHHHHHHHHcCCCCCcEEEEccccChH
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER--LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~--i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~ 419 (563)
+++++-... ++ +.++ .+.+++.+..+. ..++||+.++++.++++| ++++|+|+|. ..
T Consensus 54 ~~~~~~~~~-------------~~---~~~~-~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~ 112 (224)
T PLN02954 54 VPFEEALAA-------------RL---SLFK-PSLSQVEEFLEKRPPRLSPGIPELVKKLRARG---TDVYLVSGGF-RQ 112 (224)
T ss_pred CCHHHHHHH-------------HH---HHcC-CCHHHHHHHHHHccCCCCccHHHHHHHHHHCC---CEEEEECCCc-HH
Confidence 222221110 11 1112 245566665543 568999999999999998 9999999995 88
Q ss_pred hhHHHHhC-CCCcceEEeeccEecC-ccccCcccc-cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 420 LIRASFSS-GLNALNVHANEFSFKE-SISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 420 ~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~~~~-~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
+++.+++. |++..++++|.+.+++ |..+|.... ..+.+.+|...++.+....+. .+++|||||.+|+++...++
T Consensus 113 ~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~---~~~i~iGDs~~Di~aa~~~~ 189 (224)
T PLN02954 113 MIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY---KTMVMIGDGATDLEARKPGG 189 (224)
T ss_pred HHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC---CceEEEeCCHHHHHhhhcCC
Confidence 89998887 7765579999999864 666664322 223456799999988876542 57999999999999988855
Q ss_pred ccEEE
Q 008499 497 IGIVI 501 (563)
Q Consensus 497 ~givi 501 (563)
..+++
T Consensus 190 ~~~~~ 194 (224)
T PLN02954 190 ADLFI 194 (224)
T ss_pred CCEEE
Confidence 54444
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-13 Score=133.37 Aligned_cols=120 Identities=23% Similarity=0.291 Sum_probs=95.1
Q ss_pred CCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-ccccCc
Q 008499 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-SISTGE 449 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~ 449 (563)
.|++.+++....+.+.+.||+.++++.++++ +++.|+|++. ..+++.++.+ +++ .+++|.+.+++ +..+|.
T Consensus 53 ~~~~~~~i~~~~~~~~~~pg~~e~L~~L~~~----~~~~IvS~~~-~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~ 125 (205)
T PRK13582 53 HGLGLADIQEVIATLDPLPGAVEFLDWLRER----FQVVILSDTF-YEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGY 125 (205)
T ss_pred cCCCHHHHHHHHHhCCCCCCHHHHHHHHHhc----CCEEEEeCCc-HHHHHHHHHHcCCc--hhhcceEEECCCCeEECc
Confidence 3678999999888999999999999999864 5899999994 8899988887 663 57889988864 445554
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChh
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 506 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~ 506 (563)
- ...+.+|...++++... +..++|||||.+|++++..|++|++++++..
T Consensus 126 ~---~~~p~~k~~~l~~~~~~-----~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~ 174 (205)
T PRK13582 126 D---LRQPDGKRQAVKALKSL-----GYRVIAAGDSYNDTTMLGEADAGILFRPPAN 174 (205)
T ss_pred c---ccccchHHHHHHHHHHh-----CCeEEEEeCCHHHHHHHHhCCCCEEECCCHH
Confidence 2 12345788888766532 3679999999999999999999998876543
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-14 Score=138.63 Aligned_cols=99 Identities=25% Similarity=0.339 Sum_probs=76.4
Q ss_pred CCCchHH----HHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC--ccccCcccccCCCCCC
Q 008499 387 SLQDGCT----TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE--SISTGEIIEKVESPID 459 (563)
Q Consensus 387 ~lrpG~~----efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~--g~~tG~~~~~~~~g~~ 459 (563)
.++||+. ++++.++++| ++++|||+| ...+|+.+++. +++..+|+||++ +++ +..+|++.+..+. +
T Consensus 85 ~~~~~~~~~~~e~i~~~~~~~---~~v~IvS~~-~~~~i~~~~~~~~i~~~~v~~~~~-~~~~~~~~~~~~~~~~~~--~ 157 (192)
T PF12710_consen 85 KLFPGFIPDAMELIRELKDNG---IKVVIVSGS-PDEIIEPIAERLGIDDDNVIGNEL-FDNGGGIFTGRITGSNCG--G 157 (192)
T ss_dssp HHCTTCHTTHHHHHHHHHHTT---SEEEEEEEE-EHHHHHHHHHHTTSSEGGEEEEEE-ECTTCCEEEEEEEEEEES--H
T ss_pred ccCcCchhhHHHHHHHHHHCC---CEEEEECCC-cHHHHHHHHHHcCCCceEEEEEee-eecccceeeeeECCCCCC--c
Confidence 3455555 9999999998 999999999 48899998876 888888999999 754 3456666654333 7
Q ss_pred cHHHHHHHH--HHhCCCCCccEEEEcCCcCchHHhh
Q 008499 460 KVQAFNNTL--EKYGTDRKNLSVYIGDSVGDLLCLL 493 (563)
Q Consensus 460 K~~~l~~~~--~~~~~~~~~~viyiGDs~~Dl~~l~ 493 (563)
|..+++++. ...+. ...+++|||||.||++||+
T Consensus 158 K~~~l~~~~~~~~~~~-~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDI-DPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTH-TCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CCCeEEEEECCHHHHHHhC
Confidence 999999991 11111 2578999999999999985
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.36 E-value=1e-11 Score=135.27 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=91.7
Q ss_pred hccCCCCHHHHHHHhc----c---CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEe
Q 008499 369 GVLKGINLEDIKKAGE----R---LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSF 441 (563)
Q Consensus 369 ~~f~Gi~~~~i~~~~~----~---i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~ 441 (563)
..|+|++.+++.+.++ + -.++|...+.+ +++| ..+|||++. ..+++.+.+.-++...|+|++++.
T Consensus 85 ~~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~---~~~g----~~vvVSASp-~~~Vepfa~~~LGid~VIgTeLev 156 (497)
T PLN02177 85 IAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVF---NSFG----KRYIITASP-RIMVEPFVKTFLGADKVLGTELEV 156 (497)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHH---HhCC----CEEEEECCc-HHHHHHHHHHcCCCCEEEecccEE
Confidence 4589999999977763 2 23666655544 4555 349999973 555665554435556899999999
Q ss_pred -cCccccCccccc-CCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 442 -KESISTGEIIEK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 442 -~~g~~tG~~~~~-~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+|.+||.+.+. +|.|..|.+++++... .+ ...+++|||.||++||..|+.+++++++
T Consensus 157 ~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g---~~--~~~~aYgDS~sD~plL~~a~e~y~V~~~ 216 (497)
T PLN02177 157 SKSGRATGFMKKPGVLVGDHKRDAVLKEFG---DA--LPDLGLGDRETDHDFMSICKEGYMVPRT 216 (497)
T ss_pred CcCCEEeeeecCCCCCccHHHHHHHHHHhC---CC--CceEEEECCccHHHHHHhCCccEEeCCC
Confidence 489999999987 5789999999985442 21 1238999999999999999999999863
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.5e-10 Score=120.67 Aligned_cols=115 Identities=18% Similarity=0.173 Sum_probs=91.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.++++||+.++++.++++| .+++|+|++ ...+++.++++ |+ ...|+|.+.. .++.+..|...
T Consensus 70 ~lp~~pga~e~L~~lk~~G---~~v~LaTas-~~~~a~~i~~~lGl-Fd~Vigsd~~------------~~~kg~~K~~~ 132 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAG---RKLVLATAS-DERLAQAVAAHLGL-FDGVFASDGT------------TNLKGAAKAAA 132 (479)
T ss_pred hCCCChhHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCC-CCEEEeCCCc------------cccCCchHHHH
Confidence 4579999999999999999 999999998 47777877766 54 3456665421 12445568777
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecC
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~ 522 (563)
+.+.... ..++|+|||.+|+++++.|+.++++++++.|++.+++.||+..-+.
T Consensus 133 l~~~l~~------~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~~~~~~~~~~~ 185 (479)
T PRK08238 133 LVEAFGE------RGFDYAGNSAADLPVWAAARRAIVVGASPGVARAARALGPVERVFP 185 (479)
T ss_pred HHHHhCc------cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHHHcCCcceecC
Confidence 7655431 3478999999999999999999999999999999999999877664
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.1e-08 Score=95.74 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=70.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
...+.||+.++++.++++| ++++|+|++. ...++..++. ++... + + ...++. ....+.-|...
T Consensus 91 ~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~--f------~-~~~~~~---~~~~~kp~~~~ 154 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAG---YPLAVVTNKP-TPFVAPLLEALGIADY--F------S-VVIGGD---SLPNKKPDPAP 154 (226)
T ss_pred cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCccC--c------c-EEEcCC---CCCCCCcChHH
Confidence 4679999999999999988 9999999995 6777787776 54311 0 0 011111 01112224567
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
++.+++..+.. +.++++||||.+|+.++..+|+ +|.+
T Consensus 155 ~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v 192 (226)
T PRK13222 155 LLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGV 192 (226)
T ss_pred HHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEE
Confidence 77777777653 5789999999999999999998 4444
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-07 Score=91.32 Aligned_cols=103 Identities=14% Similarity=0.116 Sum_probs=73.8
Q ss_pred HHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEEeeccEecCccccCcccccCCCC
Q 008499 381 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVHANEFSFKESISTGEIIEKVESP 457 (563)
Q Consensus 381 ~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g 457 (563)
+....+.+.||+.++++.++++| ++++|+|.+ +...++..++. |+. ...|++.+- .|. .
T Consensus 86 ~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Sn~-~~~~~~~~l~~~gl~~~fd~i~~s~~-------~~~-------~ 147 (198)
T TIGR01428 86 EAYLRLPPHPDVPAGLRALKERG---YRLAILSNG-SPAMLKSLVKHAGLDDPFDAVLSADA-------VRA-------Y 147 (198)
T ss_pred HHHhcCCCCCCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHCCChhhhheeEehhh-------cCC-------C
Confidence 33456889999999999999998 999999998 57888888876 652 122333221 111 1
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
--+...+...++..+.. +.++++|||+.+|+.+...+|+ .|.+.
T Consensus 148 KP~~~~~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i~v~ 192 (198)
T TIGR01428 148 KPAPQVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVN 192 (198)
T ss_pred CCCHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEEEec
Confidence 11346677777777653 5789999999999999999998 44443
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.4e-08 Score=97.24 Aligned_cols=102 Identities=16% Similarity=0.160 Sum_probs=72.9
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
....+.||+.++++.++++| ++++|+|++ +...++..++. ++.. .+..- .++. ....+.-+..
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g---~~~~i~S~~-~~~~~~~~l~~~~l~~--~f~~~-------~~~~---~~~~~Kp~~~ 152 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQG---LKIGLASAS-PLHMLEAVLTMFDLRD--YFDAL-------ASAE---KLPYSKPHPE 152 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCC---CeEEEEeCC-cHHHHHHHHHhCcchh--cccEE-------EEcc---cCCCCCCCHH
Confidence 35789999999999999999 999999998 57778888776 5422 11111 1111 0112223456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.++..++..+.. +.++++||||.+|+.++..||+..+..
T Consensus 153 ~~~~~~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i~v 191 (222)
T PRK10826 153 VYLNCAAKLGVD-PLTCVALEDSFNGMIAAKAARMRSIVV 191 (222)
T ss_pred HHHHHHHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEEEe
Confidence 778888877763 578999999999999999999954443
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.90 E-value=8e-09 Score=91.72 Aligned_cols=110 Identities=14% Similarity=0.044 Sum_probs=75.5
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CC--CcceEEeeccEecC-ccccCcc-cccCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GL--NALNVHANEFSFKE-SISTGEI-IEKVESP 457 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l--~~~~I~aN~l~~~~-g~~tG~~-~~~~~~g 457 (563)
.....++||+.++++.++++| .+++|+|+++ ...++..++. ++ ....+++....... +...+.. ...+..+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g---~~i~ivS~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKG---IKLALATNKS-RREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCC---CeEEEEeCch-HHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccC
Confidence 445788999999999999998 9999999996 7788888876 54 22345544432211 1111111 1234445
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
..|...++.+....+.. ...+++||||.+|+.++..++.
T Consensus 96 ~~~~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~ 134 (139)
T cd01427 96 KPNPDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGG 134 (139)
T ss_pred CCCHHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCC
Confidence 56777777777765542 5789999999999999999764
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.7e-08 Score=95.17 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=71.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|++ +...++..++. ++.. ..+++.+ ....+--+.
T Consensus 83 ~~~~~~g~~~~L~~l~~~g---~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp~p 144 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKG---LRLGLVTNK-PTPLARPLLELLGLAKYFSVLIGGD--------------SLAQRKPHP 144 (213)
T ss_pred cCccCCCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHcCcHhhCcEEEecC--------------CCCCCCCCh
Confidence 4689999999999999988 999999998 57788888876 5421 1222211 011122245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
..+...++..+.. +.++++||||.+|+.++..||+.++
T Consensus 145 ~~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 145 DPLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 6777788777653 5789999999999999999998543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.3e-08 Score=94.22 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=69.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| +++.|+|++. ...++..|+. |+.. ..|++-+ - ...+.-|.
T Consensus 80 ~~~~~~g~~~~l~~L~~~g---~~~~i~S~~~-~~~~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~p 141 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQG---YKLGIVTTKM-RDTVEMGLKLTGLDEFFDVVITLD-----------D---VEHAKPDP 141 (214)
T ss_pred hcccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhceeEEEecC-----------c---CCCCCCCc
Confidence 4678999999999999998 9999999984 7778888876 5532 1222211 0 01122355
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+.+++...+.. +.+++|||||.+|+.+.+.||+.
T Consensus 142 ~~~~~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 142 EPVLKALELLGAK-PEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCe
Confidence 6777777776653 57899999999999999999984
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.7e-08 Score=94.38 Aligned_cols=97 Identities=14% Similarity=0.111 Sum_probs=71.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC----cceEEeeccEecCccccCcccccCCCCCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN----ALNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~----~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.||+.++++.++++| +++.|+|++ +...++..|+. ++. ...++|.. .. ..+--
T Consensus 85 ~~~l~~G~~~~L~~L~~~g---~~~~ivT~~-~~~~~~~~l~~~~l~~~~~f~~i~~~~-----~~---------~~~KP 146 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSG---IKVALTTGF-DRDTAERLLEKLGWTVGDDVDAVVCPS-----DV---------AAGRP 146 (220)
T ss_pred CCccCCCHHHHHHHHHHCC---CEEEEEeCC-chHHHHHHHHHhhhhhhccCCEEEcCC-----cC---------CCCCC
Confidence 4689999999999999998 999999988 57888888876 543 12233321 10 11112
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
+...+...+.+.+...+.++++|||+.+|+.+.+.||+.+
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 5567777777776532468999999999999999999976
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.2e-07 Score=92.02 Aligned_cols=97 Identities=18% Similarity=0.191 Sum_probs=69.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc-c-eEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA-L-NVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~-~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.|+++| +++.|+|.+ +...+...+.. ++.. . .|++.+ . .+ .+--+.
T Consensus 93 ~~~~~pg~~~~L~~L~~~g---~~l~i~Tn~-~~~~~~~~l~~~~l~~~f~~i~~~~-----~--~~-------~~KP~p 154 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAG---CVWGIVTNK-PEYLARLILPQLGWEQRCAVLIGGD-----T--LA-------ERKPHP 154 (229)
T ss_pred cCeeCCCHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCchhcccEEEecC-----c--CC-------CCCCCH
Confidence 5789999999999999998 999999988 67777777765 5422 1 111111 0 01 122245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
..+...++..+.+ +.++++||||.+|+.+.+.||+..+
T Consensus 155 ~~~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 155 LPLLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred HHHHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 6677777777763 5789999999999999999998533
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-07 Score=92.04 Aligned_cols=98 Identities=18% Similarity=0.238 Sum_probs=72.1
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
..+.+.||+.+++++++++| ++++|+|++ +...++..+.. ++.. ..+++.+ . ...+.-|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g---~~~~i~Sn~-~~~~~~~~l~~~~l~~~f~~i~~~~----------~----~~~~KP~ 133 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADG---VGTAIATGK-SGPRARSLLEALGLLPLFDHVIGSD----------E----VPRPKPA 133 (205)
T ss_pred cccccCCCHHHHHHHHHHCC---CeEEEEeCC-chHHHHHHHHHcCChhheeeEEecC----------c----CCCCCCC
Confidence 46789999999999999998 999999998 57778877776 5532 1222211 0 1112235
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
...+...+++.+.+ +.++++||||.+|+.+++.+|+.++
T Consensus 134 ~~~~~~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 134 PDIVREALRLLDVP-PEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred hHHHHHHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEE
Confidence 67778888777653 5789999999999999999998543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.1e-07 Score=96.27 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=70.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|.+ +...++..|+. ++.. ..|++.+ .+..+--+.
T Consensus 107 ~~~l~pg~~e~L~~L~~~g---~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~ii~~~--------------d~~~~KP~P 168 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHE---IPIAVASTR-PRRYLERAIEAVGMEGFFSVVLAAE--------------DVYRGKPDP 168 (260)
T ss_pred CcccCCCHHHHHHHHHHCC---CEEEEEeCc-CHHHHHHHHHHcCCHhhCcEEEecc--------------cCCCCCCCH
Confidence 4678999999999999998 999999998 67888888876 5532 2232221 011112234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+...+...+.. ...+++||||.+|+.+.+.||+.+
T Consensus 169 e~~~~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 169 EMFMYAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred HHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEE
Confidence 5666777776653 578999999999999999999843
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.9e-07 Score=92.04 Aligned_cols=95 Identities=12% Similarity=0.153 Sum_probs=68.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| ++++|+|++ +...++..++. ++.. ..|++.+ - ...+--+.
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g---~~l~ivTn~-~~~~~~~~l~~~~i~~~f~~i~~~d-----------~---~~~~Kp~p 160 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQG---VEMALITNK-PERFVAPLLDQMKIGRYFRWIIGGD-----------T---LPQKKPDP 160 (272)
T ss_pred CCccCCCHHHHHHHHHHCC---CeEEEEECC-cHHHHHHHHHHcCcHhhCeEEEecC-----------C---CCCCCCCc
Confidence 4678999999999999988 999999988 57777777765 4421 1122111 0 11122344
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+..+++..+.+ +.++++|||+.+|+.+...+++.
T Consensus 161 ~~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 161 AALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred HHHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCe
Confidence 6777777777653 57899999999999999999983
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.4e-07 Score=91.97 Aligned_cols=97 Identities=12% Similarity=0.018 Sum_probs=69.4
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
+...+.||+.++|+.|+++| +++.|+|++ +...++.+|+. ++.. ..|++.+ . +..+--
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g---~~l~IvT~~-~~~~~~~~l~~~gl~~~f~d~ii~~~-----~---------~~~~KP 157 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARG---IKIGSTTGY-TREMMDVVAPEAALQGYRPDYNVTTD-----D---------VPAGRP 157 (253)
T ss_pred hcCccCCCHHHHHHHHHHCC---CeEEEECCC-cHHHHHHHHHHHHhcCCCCceEEccc-----c---------CCCCCC
Confidence 35789999999999999998 999999998 68888888876 5422 1222211 0 001112
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
+...+...++..+...+..+++||||.+|+.+.+.|++.
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 345666666666653246899999999999999999983
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.6e-07 Score=89.72 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=67.5
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc-ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA-LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~-~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
+.+.+.||+.++++.|+++| +++.|+|.+ +...+...+.. ++.. ..|++.+ .+ ...--+.
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g---~~~~ivTn~-~~~~~~~~l~~~~l~~~~~i~~~~----------~~----~~~KP~p 141 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLG---IPWAIVTSG-SVPVASARHKAAGLPAPEVFVTAE----------RV----KRGKPEP 141 (218)
T ss_pred cCceeCcCHHHHHHHHHHcC---CcEEEEcCC-CchHHHHHHHhcCCCCccEEEEHH----------Hh----cCCCCCc
Confidence 45789999999999999999 999999998 45556655554 4421 1222211 00 0111133
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
..+...+...+.. +.++++||||.+|+.+...||+. |.+.
T Consensus 142 ~~~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 142 DAYLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred HHHHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 4555556666653 57899999999999999999984 4443
|
|
| >PRK05157 pyrroloquinoline quinone biosynthesis protein PqqC; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.1e-06 Score=83.65 Aligned_cols=205 Identities=14% Similarity=0.093 Sum_probs=140.0
Q ss_pred CCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 008499 8 SPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISEL 87 (563)
Q Consensus 8 ~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~ 87 (563)
.++-....|.+.|-..- ....++|||-+.+.+|+|+++.++.|..|=|+|-..+.+..+-++++++|.+.++.+.+.
T Consensus 6 ~~~~s~~eF~~~L~~~~---~~yh~~HPF~~~~~~Gklt~~qlq~wa~nrYyyq~~~P~kdaaI~S~c~D~e~Rr~w~~r 82 (246)
T PRK05157 6 AALLSPEEFEAALRAIG---ARYHIHHPFHRLLHEGKLTREQIQAWVANRFYYQINIPLKDAAILSNCPDRETRREWRQR 82 (246)
T ss_pred cCCCCHHHHHHHHHHHH---HhhcccChHHHHHHcCCCCHHHHHHHHHHhchhhccchHHHHHHHHcCCCHHHHHHHHHH
Confidence 33445556777766544 123358999999999999999999999999999999999999999999999987654333
Q ss_pred HHHHHH-H--------HHHHHHHHHHhCCCccc--cc-CCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHH
Q 008499 88 RKGVLE-E--------LKMHDSFVKEWGTDLAK--MA-TVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAY 155 (563)
Q Consensus 88 ~~~i~~-E--------~~~h~~~~~~~gi~~~~--~~-~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~ 155 (563)
|.+ | +++...+++..|++.++ +. ...|+|+..++-....+.... | .+
T Consensus 83 ---i~d~dG~~~~~ghie~Wlrf~ealGl~re~v~s~~~~lP~tr~aVday~~~~r~~~------------~------~e 141 (246)
T PRK05157 83 ---ILDHDGDGGGEGGIERWLRLGEAVGLDRDYVLSLRGVLPGVRFAVDAYVNFARRAP------------W------LE 141 (246)
T ss_pred ---HHHhcCCCCCCCcHHHHHHHHHHcCCCHHHHhccccCChHHHHHHHHHHHHHccCC------------H------HH
Confidence 332 2 57888999999999873 33 478999999998888885332 2 46
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHH-------H-HHHHHHHhhccCCHHHHHHHHH
Q 008499 156 TLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASAL-------Q-NEDLLDKLSVSLTGEELDIIEK 227 (563)
Q Consensus 156 ~l~Al~pC~~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~-------~-l~~~ld~~~~~~~~~~~~~~~~ 227 (563)
++++++. +.-=-.|.+...... ..+..|++.=+=.=|..... . +..+++.+ .++++++++.+
T Consensus 142 avas~lt-E~~~P~I~~~ri~gl------~~~Y~~~~~e~l~yF~~h~~~a~~Dvehal~~~l~~~---~t~e~q~~al~ 211 (246)
T PRK05157 142 AVASSLT-ELFAPQIHQERLAGW------PEHYPWIDPEGLAYFRSRLTQAPRDVEHGLAYVLDHA---TTREQQERALE 211 (246)
T ss_pred HHHHHHH-HHhhhHHHHHHHHHH------HHHCCCCCHHHHHHHHHHhhccchhHHHHHHHHHHHc---CCHHHHHHHHH
Confidence 6777776 544344433222211 11224554211111221111 1 22334443 37789999999
Q ss_pred HHHHHHHHHHHhhccCCCC
Q 008499 228 LYHQAMKLEVEFFCAQPLA 246 (563)
Q Consensus 228 ~f~~~~~lE~~Fw~~a~~~ 246 (563)
+-...|..=|.|+|+....
T Consensus 212 al~~k~d~Lw~~LDai~~a 230 (246)
T PRK05157 212 ALQFKLDVLWSMLDALYMA 230 (246)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988443
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1e-06 Score=89.43 Aligned_cols=97 Identities=9% Similarity=0.007 Sum_probs=68.7
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
+.+.+.||+.++|+.|+++| +++.|+|++ +...++.+|+. ++.+ ..|++.+ . ...+--
T Consensus 98 ~~~~~~pg~~elL~~L~~~g---~~l~I~T~~-~~~~~~~~l~~~~l~~~~~d~i~~~~-----~---------~~~~KP 159 (267)
T PRK13478 98 DYATPIPGVLEVIAALRARG---IKIGSTTGY-TREMMDVVVPLAAAQGYRPDHVVTTD-----D---------VPAGRP 159 (267)
T ss_pred hcCCCCCCHHHHHHHHHHCC---CEEEEEcCC-cHHHHHHHHHHHhhcCCCceEEEcCC-----c---------CCCCCC
Confidence 35788999999999999998 999999988 57777777765 3321 1222211 0 011112
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
+...+...+.+.+......+++||||.+|+.+...||+.
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 346677777777653346799999999999999999983
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=2e-07 Score=94.94 Aligned_cols=95 Identities=22% Similarity=0.342 Sum_probs=70.4
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+.+.||+.++++.|+++| +++.|+|.+ +...+...|+. |+... +.. +.++... ..|..
T Consensus 139 ~~~~l~pg~~e~L~~L~~~g---i~laIvSn~-~~~~~~~~L~~~gl~~~------F~~---vi~~~~~------~~k~~ 199 (273)
T PRK13225 139 PALQLFPGVADLLAQLRSRS---LCLGILSSN-SRQNIEAFLQRQGLRSL------FSV---VQAGTPI------LSKRR 199 (273)
T ss_pred ccCCcCCCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHcCChhh------eEE---EEecCCC------CCCHH
Confidence 35788999999999999998 999999998 58888888876 65321 100 1111110 12567
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
.+..++.+.+.. +.++++||||.+|+.+...|++-
T Consensus 200 ~~~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~ 234 (273)
T PRK13225 200 ALSQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLI 234 (273)
T ss_pred HHHHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCe
Confidence 777777776653 47899999999999999999983
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.69 E-value=4e-07 Score=96.08 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=70.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++|+.|+++| +++.|+|.+ ....++..|+. |+.. ..|++-+- ...+--+.
T Consensus 214 ~~~l~pGa~ElL~~Lk~~G---iklaIaSn~-~~~~~~~~L~~lgL~~yFd~Iv~sdd--------------v~~~KP~P 275 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYK---IPMALVSTR-PRKTLENAIGSIGIRGFFSVIVAAED--------------VYRGKPDP 275 (381)
T ss_pred CCCcCcCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHcCCHHHceEEEecCc--------------CCCCCCCH
Confidence 4678999999999999999 999999988 57888888886 6532 22222110 00112244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+.......+. .+.++++||||.+|+.+...|++.+
T Consensus 276 eifl~A~~~lgl-~Peecl~IGDS~~DIeAAk~AGm~~ 312 (381)
T PLN02575 276 EMFIYAAQLLNF-IPERCIVFGNSNQTVEAAHDARMKC 312 (381)
T ss_pred HHHHHHHHHcCC-CcccEEEEcCCHHHHHHHHHcCCEE
Confidence 566667776665 3578999999999999999999943
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.1e-07 Score=87.91 Aligned_cols=99 Identities=14% Similarity=0.181 Sum_probs=69.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.|+++| +++.|+|.+. ...+...++. ++.. ..|++.+- .| .+--+.
T Consensus 92 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~~~-------~~-------~~KP~~ 153 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESG---YRLGIITDGL-PVKQWEKLERLGVRDFFDAVITSEE-------EG-------VEKPHP 153 (221)
T ss_pred hCCCCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHhCChHHhccEEEEecc-------CC-------CCCCCH
Confidence 5789999999999999998 9999999984 6666667765 5431 12222210 11 111244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
..+...+++.+.+ +.++++||||. +|+.+.+.+|+ .|.+.
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 5677777777653 47899999998 99999999998 44443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.8e-06 Score=83.62 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=63.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+.||+.++++.++++| +++.|+|.+ .. .+...|+. ++.. ..|++.. ..| .+--+..
T Consensus 104 ~~~~~g~~~~l~~L~~~g---~~~~i~Sn~-~~-~~~~~l~~~~l~~~fd~i~~s~-------~~~-------~~KP~~~ 164 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERG---LILGVISNF-DS-RLRGLLEALGLLEYFDFVVTSY-------EVG-------AEKPDPK 164 (203)
T ss_pred ceeCcCHHHHHHHHHHCC---CEEEEEeCC-ch-hHHHHHHHCCcHHhcceEEeec-------ccC-------CCCCCHH
Confidence 468899999999999988 999999976 33 35666665 4421 1222211 011 1111335
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCcc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG 498 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g 498 (563)
.+...++..+. .+.++++|||+. +|+.+...+|+.
T Consensus 165 ~~~~~~~~~~~-~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGI-SPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCC-ChhHEEEECCCchHHHHHHHHcCCe
Confidence 66777776665 357899999997 899999999864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=98.64 E-value=6e-07 Score=83.48 Aligned_cols=96 Identities=21% Similarity=0.312 Sum_probs=72.5
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| ++++|+|.+ +...++..++. ++. ...|++.. .......+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~---~~~~i~Sn~-~~~~~~~~l~~~~~~~~f~~i~~~~--------------~~~~~Kp~ 135 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKG---IPLVIVSNG-SRERIERVLERLGLDDYFDEIISSD--------------DVGSRKPD 135 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTT---SEEEEEESS-EHHHHHHHHHHTTHGGGCSEEEEGG--------------GSSSSTTS
T ss_pred hccchhhhhhhhhhhccccc---ceeEEeecC-Ccccccccccccccccccccccccc--------------hhhhhhhH
Confidence 46899999999999999888 999999988 78888888876 543 12233221 01111234
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
...++.+++..+. .+.++++|||+..|+.+.+.+|+.
T Consensus 136 ~~~~~~~~~~~~~-~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 136 PDAYRRALEKLGI-PPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHHTS-SGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHcCC-CcceEEEEeCCHHHHHHHHHcCCe
Confidence 5778888887776 358899999999999999999973
|
... |
| >COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.2e-06 Score=79.80 Aligned_cols=185 Identities=15% Similarity=0.141 Sum_probs=133.3
Q ss_pred hcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH---HHHH---HHHHHHHHHHHh
Q 008499 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK---GVLE---ELKMHDSFVKEW 105 (563)
Q Consensus 32 ~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~---~i~~---E~~~h~~~~~~~ 105 (563)
..|||.+.+.+|.|+++.++-|++.-++|+++|...++..+++++|++..+...+.+. +..+ =+++-..++..+
T Consensus 25 ~~HpF~~~m~~g~lt~~ql~~yvi~~~~~~k~~p~~lSail~rcdd~~~r~~~leni~de~~g~~e~~hidlwlr~aeAl 104 (242)
T COG5424 25 LPHPFYVAMQEGELTKEQLQGYVINRYYYQKNFPLYLSAILARCDDDDVRREWLENIMDEDNGYNEPNHIDLWLRLAEAL 104 (242)
T ss_pred CCCHHHHHHHccCCCHHHHHHHHHhhhHHHHhhhHHHHHHHhcCCcHhHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHc
Confidence 7899999999999999999999999999999999999999999999987654433321 1111 246667788999
Q ss_pred CCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008499 106 GTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEG 183 (563)
Q Consensus 106 gi~~~~--~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~~~~~~~~~~~ 183 (563)
|++.++ +..|+|+++.=++.....+..+. .++++++|+.-+..=..|. ..... .
T Consensus 105 Gvs~eei~s~eplp~~~~av~~~~~~a~~~s------------------~~~~~aslyt~El~apri~---~~ki~---g 160 (242)
T COG5424 105 GVSREEILSHEPLPSTRFAVDTWVRFATEKS------------------WLEGAASLYTYELVAPRIS---VEKIS---G 160 (242)
T ss_pred CCCHHHHhhcCCCHHHHHHHHHHHHHhcchh------------------HHHHHHHHHHHHhhccHHH---HHHcc---C
Confidence 999983 55699999999999888886543 3567777766554333332 22221 2
Q ss_pred cccccccccccCC--------hhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 184 NHPYTKWIDNYSS--------ESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 184 ~~~y~~Wi~~y~s--------~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
-+.|..|++ +.. +.-...+....+++.+++. +.|..+++..+-.+++..=+.|-|+.
T Consensus 161 l~~~~~~~~-~a~~~yf~~h~eaD~~Ha~Ealkiv~~~~~--t~E~~~~~~~~~~~~~D~lw~fLda~ 225 (242)
T COG5424 161 LPYFNGFSD-AAAYAYFREHLEADVRHAEEALKIVLELAG--TRELQDQVLDALQKSLDVLWLFLDAR 225 (242)
T ss_pred chhhcCcch-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554 111 1224455566666666652 45777888999999999999999976
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-06 Score=86.86 Aligned_cols=98 Identities=17% Similarity=0.236 Sum_probs=71.8
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.+.||+.++++.++++| +++.|+|.+ +...++..++. ++.. ..|++.+- .| .+--
T Consensus 89 ~~~~~~~~g~~e~L~~Lk~~g---~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~iv~s~~-------~~-------~~KP 150 (224)
T PRK14988 89 GPRAVLREDTVPFLEALKASG---KRRILLTNA-HPHNLAVKLEHTGLDAHLDLLLSTHT-------FG-------YPKE 150 (224)
T ss_pred hccCCcCCCHHHHHHHHHhCC---CeEEEEeCc-CHHHHHHHHHHCCcHHHCCEEEEeee-------CC-------CCCC
Confidence 456889999999999999999 999999998 67888887775 5421 23333321 01 1112
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
+...+...+++.+. .+.++++||||.+|+.+...||+..
T Consensus 151 ~p~~~~~~~~~~~~-~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 151 DQRLWQAVAEHTGL-KAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 35667777777665 3578999999999999999999853
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.7e-07 Score=88.96 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=70.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| +++.|+|.+ +...++..|+. ++.. ..|++.+- ...+--+.
T Consensus 106 ~~~l~pgv~e~L~~L~~~g---~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~iv~~~~--------------~~~~KP~p 167 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRG---LKRAAVTNA-PRENAELMISLLGLSDFFQAVIIGSE--------------CEHAKPHP 167 (248)
T ss_pred cCCcCccHHHHHHHHHHcC---CeEEEEeCC-CHHHHHHHHHHcCChhhCcEEEecCc--------------CCCCCCCh
Confidence 5789999999999999998 999999998 57888888876 5532 22333221 00111233
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+...+++.+.. +.+++||||+.+|+.+.+.|++.+
T Consensus 168 ~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 168 DPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred HHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEE
Confidence 5566666666653 578999999999999999999843
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.5e-07 Score=85.05 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=65.3
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| +++.|+|++ ..++..|+. ++.. ..|++..- .+ ....+.
T Consensus 86 ~~~~~~g~~~~l~~l~~~g---~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~~-------~~-------~~kp~~ 145 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKG---IAVGLGSSS---KNADRILAKLGLTDYFDAIVDADE-------VK-------EGKPHP 145 (185)
T ss_pred CCCCCcCHHHHHHHHHHcC---CeEEEEeCc---hhHHHHHHHcChHHHCCEeeehhh-------CC-------CCCCCh
Confidence 4789999999999999988 999999976 456777765 5421 12222110 00 111233
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+...+++.+.. +.++++||||.+|+.+...+++..
T Consensus 146 ~~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 146 ETFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeE
Confidence 4556666666653 578999999999999999999753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02111 PQQ_syn_pqqC coenzyme PQQ biosynthesis protein C | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.3e-06 Score=81.95 Aligned_cols=185 Identities=13% Similarity=0.083 Sum_probs=128.8
Q ss_pred hhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH---------HHHHHHH
Q 008499 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEE---------LKMHDSF 101 (563)
Q Consensus 31 ~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~E---------~~~h~~~ 101 (563)
..+|||-+.+.+|+|+++.++.|..|=|+|-..+.+..+-++++++|.+.++.+... +.+| .++...+
T Consensus 19 h~~HPF~~~~~~GkLt~~ql~~wa~nrYyyq~~iP~kdAAi~s~c~D~e~Rr~wl~r---i~DhdG~~~~~ggie~Wlrf 95 (239)
T TIGR02111 19 HDLHPFHALLHDGKLTRDQVQAWVLNRYYYQANIPLKDAAILARCPDPQLRRIWRQR---ILDHDGDHEEDGGIERWLRL 95 (239)
T ss_pred cccCcHHHHHhcCCCCHHHHHHHHHHhhhhhhcccHHHHHHHHcCCCHHHHHHHHHH---HHHhcCCCCCCCcHHHHHHH
Confidence 468999999999999999999999999999988999999999999999987665333 3332 5788899
Q ss_pred HHHhCCCccc---ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008499 102 VKEWGTDLAK---MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178 (563)
Q Consensus 102 ~~~~gi~~~~---~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~~~~~~ 178 (563)
++..|++.+. .....|+|+..++-....+.... | .++++|++. +.-=-.|.+.-....
T Consensus 96 aealGl~re~v~s~~~~lP~trfaVday~~f~r~~~------------~------~eavasslT-E~f~P~I~~~ri~gl 156 (239)
T TIGR02111 96 AEAVGLDREYVLSTRGVLPGTRFAVDAYVHFVREKS------------L------LEAIASSLT-ELFAPQIHSERVAGM 156 (239)
T ss_pred HHHhCCCHHHHhcccCCCHHHHHHHHHHHHHHhcCC------------H------HHHHHHHHH-HHHhHHHHHHHHHhH
Confidence 9999999873 33348999988887777765222 2 467888766 554444443222211
Q ss_pred cCCCCcccccccccccCChhHHHHHH-HHHHH-------HHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008499 179 NANEGNHPYTKWIDNYSSESFQASAL-QNEDL-------LDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLA 246 (563)
Q Consensus 179 ~~~~~~~~y~~Wi~~y~s~~f~~~v~-~l~~~-------ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~ 246 (563)
..+..|++.=+=.=|..... .-++. ++.+ .++++.+++.++-...|..=|.|+|+....
T Consensus 157 ------~~~Y~~~~~e~l~yF~~r~~qa~rd~e~~l~~~l~~~---~t~e~Q~~~l~al~fk~dvLw~~LDal~~a 223 (239)
T TIGR02111 157 ------LQHYDFIDDAALAYFRKRLTQAPRDVEFGLDYVLDHA---TTREKQEAALEALTFKCDVLWAQLDALYFA 223 (239)
T ss_pred ------HHHCCCCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11234665321111222111 11222 4444 377889999999999999999999987443
|
This model describes the coenzyme PQQ (pyrrolo-quinoline-quinone) biosynthesis protein PqqC.In contrast to the broader model pfam05312, this model does not include related proteins likely to be functionally distinct from PqqC, such as homologs found in the Chlamydias. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.2e-06 Score=81.82 Aligned_cols=108 Identities=12% Similarity=0.127 Sum_probs=72.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
..+.||+.++++.++++| ++++|+|.+ +...+...+.. ++.. ..|++.. .+..+--+.
T Consensus 83 ~~~~~g~~e~L~~l~~~g---~~~~i~Sn~-~~~~~~~~~~~~~~l~~~fd~v~~s~--------------~~~~~KP~p 144 (199)
T PRK09456 83 VALRPEVIAIMHKLREQG---HRVVVLSNT-NRLHTTFWPEEYPEVRAAADHIYLSQ--------------DLGMRKPEA 144 (199)
T ss_pred hccCHHHHHHHHHHHhCC---CcEEEEcCC-chhhHHHHHhhchhHHHhcCEEEEec--------------ccCCCCCCH
Confidence 468999999999999998 999999987 45554443332 2210 1122111 011112245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCChhHHHHHH
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRVGS 512 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~~L~~~~~ 512 (563)
..+...++..+. .+..++||||+..|+.+.+.+|+ .|.+.+...++++.+
T Consensus 145 ~~~~~~~~~~~~-~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 145 RIYQHVLQAEGF-SAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred HHHHHHHHHcCC-ChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence 677777777765 35789999999999999999999 566655566665544
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.3e-06 Score=82.99 Aligned_cols=93 Identities=13% Similarity=0.137 Sum_probs=63.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++|+.|+++| +++.|+|.++. ....|+. ++.. ..+++.. ......-+.
T Consensus 85 ~~~~~pg~~~~L~~L~~~g---~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~p 144 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNN---IKIALASASKN---APTVLEKLGLIDYFDAIVDPA--------------EIKKGKPDP 144 (185)
T ss_pred CcccCccHHHHHHHHHHCC---CeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehh--------------hcCCCCCCh
Confidence 3578899999999999998 99999998643 2345554 4421 1111111 011112345
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..++..+++.+.+ +.++++|||+.+|+.+...+++.
T Consensus 145 ~~~~~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 145 EIFLAAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCE
Confidence 6677777776653 57899999999999999999984
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=5e-06 Score=81.74 Aligned_cols=98 Identities=17% Similarity=0.315 Sum_probs=68.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.|+ ++ +++.|+|.++ .+.++..|+. |+.. ..|++.+ ..| ..--+.
T Consensus 93 ~~~~~~g~~~~L~~L~-~~---~~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~v~~~~-------~~~-------~~KP~p 153 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GK---VKMGIITNGF-TELQQVRLERTGLRDYFDLLVISE-------QVG-------VAKPDV 153 (224)
T ss_pred cCccCccHHHHHHHHH-hC---CeEEEEeCCc-HHHHHHHHHhCChHHHcCEEEEEC-------ccC-------CCCCCH
Confidence 4679999999999999 56 8999999984 7777777776 5531 1222221 011 111234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCcc-EEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-ivi 501 (563)
..+...++..+......+++||||. +|+.+.+.||+. |.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~ 195 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWL 195 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEE
Confidence 6677777777643336799999998 799999999984 444
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-06 Score=80.66 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=62.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCC--cceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLN--ALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
.....||+.++++.++++| +++.|+|.+. ...+...++..+. ...|++.+ . .. +.-+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~l~~~f~~i~~~~-----~---------~~-~Kp~~~ 122 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAG---IKLGIISNGS-LRAQKLLLRKHLGDYFDLILGSD-----E---------FG-AKPEPE 122 (154)
T ss_pred hheeccCHHHHHHHHHHCc---CeEEEEeCCc-hHHHHHHHHHHHHhcCcEEEecC-----C---------CC-CCcCHH
Confidence 4456699999999999988 9999999985 6666666553111 11122211 0 11 223457
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
.+..++.+.+.+ + ++++|||+.+|+.+.+.|+
T Consensus 123 ~~~~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 778888777764 4 8999999999999998875
|
HAD subfamilies caused by an overly broad single model. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.4e-06 Score=84.15 Aligned_cols=93 Identities=17% Similarity=0.213 Sum_probs=68.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+-||..+.+..++++| +++.|+|.. +...++.+|+. |+.. ..+++ .++ .. ...-...
T Consensus 88 ~~~~~gv~e~L~~L~~~g---~~l~i~T~k-~~~~~~~~l~~~gl~~~F~~i~g----~~~----~~------~~KP~P~ 149 (220)
T COG0546 88 SRLFPGVKELLAALKSAG---YKLGIVTNK-PERELDILLKALGLADYFDVIVG----GDD----VP------PPKPDPE 149 (220)
T ss_pred CccCCCHHHHHHHHHhCC---CeEEEEeCC-cHHHHHHHHHHhCCccccceEEc----CCC----CC------CCCcCHH
Confidence 579999999999999999 999999988 68888888886 6532 12222 010 00 0111345
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
.+..++...+.+ +.++++||||.+|+.|.+.|++
T Consensus 150 ~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~ 183 (220)
T COG0546 150 PLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV 183 (220)
T ss_pred HHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCC
Confidence 666777777765 4689999999999999999996
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.7e-06 Score=90.78 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=70.4
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHh-C-CCC--cceEEeeccEecCccccCcccccCCCCCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS-S-GLN--ALNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~-~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
+++.+.||+.++++.|+++| +++.|+|.+ +...+...|. . ++. ...|+|.+- +..+--
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g---~~l~IvTn~-~~~~~~~~l~~~~gl~~~Fd~ii~~d~--------------v~~~KP 151 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHG---VPMALASNS-PRANIEAKISCHQGWKESFSVIVGGDE--------------VEKGKP 151 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCC---CcEEEEeCC-cHHHHHHHHHhccChHhhCCEEEehhh--------------cCCCCC
Confidence 46788999999999999998 999999998 5777777775 3 442 122322220 111122
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
+.+.+...++..+.. +.++++||||.+|+.+...||+.++
T Consensus 152 ~p~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 152 SPDIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred CHHHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 456777777777653 5789999999999999999998533
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.6e-05 Score=81.50 Aligned_cols=102 Identities=20% Similarity=0.241 Sum_probs=68.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
+.+.||+.++++.++++| +++.|+|.+ +...+...+.... ... +.+.+.+ .+|. .+...--+...+.
T Consensus 143 ~~l~pGv~elL~~L~~~g---~~l~IvTn~-~~~~~~~~l~~~~-~~~-~~~~~~~----v~~~---~~~~~KP~p~~~~ 209 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAG---IKVAVCSTS-NEKAVSKIVNTLL-GPE-RAQGLDV----FAGD---DVPKKKPDPDIYN 209 (286)
T ss_pred CCchhhHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHhc-ccc-ccCceEE----Eecc---ccCCCCCCHHHHH
Confidence 689999999999999998 999999987 6777877776410 000 0111111 0111 0111122345777
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
..+...+.+ +.++++||||.+|+.+...+|+.++.
T Consensus 210 ~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~ 244 (286)
T PLN02779 210 LAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIV 244 (286)
T ss_pred HHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEE
Confidence 777777653 57899999999999999999985444
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.8e-06 Score=89.95 Aligned_cols=92 Identities=18% Similarity=0.290 Sum_probs=67.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|.+ +.+.+...++. ++.. ..|++-+ + . .+..|.
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g---~~l~IvS~~-~~~~~~~~l~~~~l~~~f~~i~~~d----~------v-----~~~~kP 388 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENN---CSIYIASNG-LTEYLRAIVSYYDLDQWVTETFSIE----Q------I-----NSLNKS 388 (459)
T ss_pred CCCcCCCHHHHHHHHHHCC---CeEEEEeCC-chHHHHHHHHHCCcHhhcceeEecC----C------C-----CCCCCc
Confidence 4688999999999999988 999999998 68888988876 5421 1222211 0 0 011344
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+...+++.+ ...+++||||.+|+.+...|++.
T Consensus 389 ~~~~~al~~l~---~~~~v~VGDs~~Di~aAk~AG~~ 422 (459)
T PRK06698 389 DLVKSILNKYD---IKEAAVVGDRLSDINAAKDNGLI 422 (459)
T ss_pred HHHHHHHHhcC---cceEEEEeCCHHHHHHHHHCCCe
Confidence 56666665543 36799999999999999999984
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.3e-05 Score=78.76 Aligned_cols=98 Identities=12% Similarity=0.177 Sum_probs=67.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.+.+.||+.++++.+ + +++.|+|.+ ....++..|+. ++... |++.+.++. .+...--+...
T Consensus 86 ~~~~~~gv~~~L~~L---~---~~~~ivTn~-~~~~~~~~l~~~~l~~~--------F~~~v~~~~---~~~~~KP~p~~ 147 (221)
T PRK10563 86 ELEPIAGANALLESI---T---VPMCVVSNG-PVSKMQHSLGKTGMLHY--------FPDKLFSGY---DIQRWKPDPAL 147 (221)
T ss_pred cCCcCCCHHHHHHHc---C---CCEEEEeCC-cHHHHHHHHHhcChHHh--------CcceEeeHH---hcCCCCCChHH
Confidence 578899999999988 3 799999998 57788888876 54211 111111111 00111224567
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
+...++..+.. +..+++|||+.+|+.+.+.||+.++.
T Consensus 148 ~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 77777777663 57899999999999999999996543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.8e-06 Score=97.58 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=80.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-++|||..+.++.|++.| +.++++|+. .......+-++ |++ +++++ +++.+|.+.+
T Consensus 445 D~~Rp~a~eaI~~l~~~G---i~v~miTGD-~~~ta~~iA~~lGI~--~v~a~-----------------~~PedK~~~v 501 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMG---IKTIMITGD-NRLTAAAIAAEAGVD--DFIAE-----------------ATPEDKIALI 501 (675)
T ss_pred ccchhHHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCC--EEEcC-----------------CCHHHHHHHH
Confidence 389999999999999999 999999986 35444444333 542 33331 3567899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhH
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 526 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~ 526 (563)
+++.++ +..+.++|||.||.++|..||+||++++...+.+-+. .++=+++++.
T Consensus 502 ~~lq~~-----g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaa----divLldd~~s 554 (675)
T TIGR01497 502 RQEQAE-----GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA----NMVDLDSDPT 554 (675)
T ss_pred HHHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC----CEEECCCCHH
Confidence 998763 3568899999999999999999999986554442221 5665655444
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.8e-05 Score=76.11 Aligned_cols=97 Identities=18% Similarity=0.206 Sum_probs=67.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++ ++++|+|.++ ...++..++. ++.. ..|++..- .| ...-+.
T Consensus 95 ~~~~~~g~~~~L~~l~~~----~~~~i~Sn~~-~~~~~~~l~~~~l~~~fd~i~~~~~-------~~-------~~KP~~ 155 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK----FRLYIVTNGV-RETQYKRLRKSGLFPFFDDIFVSED-------AG-------IQKPDK 155 (224)
T ss_pred cCeeCccHHHHHHHHHhc----CcEEEEeCCc-hHHHHHHHHHCCcHhhcCEEEEcCc-------cC-------CCCCCH
Confidence 468999999999999874 6999999985 6777777776 5532 22222110 01 111244
Q ss_pred HHHHHHHHHh-CCCCCccEEEEcCCc-CchHHhhhcCc-cEEE
Q 008499 462 QAFNNTLEKY-GTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~-~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi 501 (563)
..+...++.. +. .+.++++||||. +|+.+.+.+|+ +|.+
T Consensus 156 ~~~~~~~~~~~~~-~~~~~v~igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 156 EIFNYALERMPKF-SKEEVLMIGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred HHHHHHHHHhcCC-CchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence 5666666666 54 357899999998 79999999998 4444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=98.31 E-value=9.9e-06 Score=78.08 Aligned_cols=98 Identities=20% Similarity=0.246 Sum_probs=59.3
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHH-HHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA-SFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~-~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
+...+.||+.++++.|++++ +++++|.+ +. .... .++. ++.. .+-. .| +.+.++.. ...|.
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~----~~~i~Tn~-~~-~~~~~~~~~~~l~~--~f~~--~f-~~i~~~~~------~~~kp 133 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDY----DFVAVTAL-GD-SIDALLNRQFNLNA--LFPG--AF-SEVLMCGH------DESKE 133 (197)
T ss_pred HhccCCCCHHHHHHHHHhcC----CEEEEeCC-cc-chhHHHHhhCCHHH--hCCC--cc-cEEEEecc------CcccH
Confidence 35679999999999998754 57777764 22 2333 2222 3210 0000 01 01111110 11356
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc--CccEEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA--DIGIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A--d~givi 501 (563)
..+...+.+.+ ...++|||||.+|+.+...| |+.++.
T Consensus 134 ~~~~~a~~~~~---~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 134 KLFIKAKEKYG---DRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred HHHHHHHHHhC---CCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 77777777665 35689999999999999999 985444
|
2 hypothetical protein; Provisional |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.3e-05 Score=75.61 Aligned_cols=88 Identities=13% Similarity=0.103 Sum_probs=60.0
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc--eEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL--NVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
..++..++++.++++| +++.|+|++ ....++..|+. |+... .+++-+ + ... --+...+
T Consensus 107 ~~~~~~~~L~~l~~~g---~~~~i~T~~-~~~~~~~~l~~~gl~~~f~~~~~~~----~----------~~~-KP~p~~~ 167 (197)
T TIGR01548 107 TLLTPKGLLRELHRAP---KGMAVVTGR-PRKDAAKFLTTHGLEILFPVQIWME----D----------CPP-KPNPEPL 167 (197)
T ss_pred cccCHHHHHHHHHHcC---CcEEEECCC-CHHHHHHHHHHcCchhhCCEEEeec----C----------CCC-CcCHHHH
Confidence 4456699999999888 999999998 57888888876 65321 111111 1 001 1244556
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
...++..+.. ..++++|||+.+|+.+...|
T Consensus 168 ~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 168 ILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 6666666653 46899999999999988754
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.25 E-value=6.1e-05 Score=71.75 Aligned_cols=97 Identities=11% Similarity=0.196 Sum_probs=65.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||..++++.++ .+++|+|.+ +...+...|+. |+.. ..|++.+- .|. .....--+.
T Consensus 82 ~~~~~~g~~~~L~~L~------~~~~i~Tn~-~~~~~~~~l~~~gl~~~fd~i~~~~~-------~~~---~~~~~KP~p 144 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP------GRKIIFTNG-DRAHARRALNRLGIEDCFDGIFCFDT-------ANP---DYLLPKPSP 144 (184)
T ss_pred hCCCCHHHHHHHHhCC------CCEEEEeCC-CHHHHHHHHHHcCcHhhhCeEEEeec-------ccC---ccCCCCCCH
Confidence 4568899999999886 368999998 47788888876 5532 22333221 010 000011244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+...+++.+.. +.++++|||+..|+.+...+|+..
T Consensus 145 ~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 6677777776653 578999999999999999999743
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.6e-05 Score=72.64 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=63.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc--
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK-- 460 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-- 460 (563)
+.+.||+.++++.++++| +++.|+|.+. ... ...+.+ ++.. ..|++.+ . .+..|
T Consensus 84 ~~~~~g~~~~l~~l~~~g---~~~~i~Tn~~-~~~-~~~~~~~~l~~~f~~i~~~~--------------~--~~~~KP~ 142 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARG---KKLALLTNSP-RDH-AVLVQELGLRDLFDVVIFSG--------------D--VGRGKPD 142 (183)
T ss_pred CccCcCHHHHHHHHHHCC---CeEEEEeCCc-hHH-HHHHHhcCCHHHCCEEEEcC--------------C--CCCCCCC
Confidence 689999999999999988 9999999985 444 444442 4321 1222211 0 11223
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
...++..++..+.. +.++++|||+..|+.+.+.+|+-
T Consensus 143 ~~~~~~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 143 PDIYLLALKKLGLK-PEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCE
Confidence 45667777766653 57899999999999999999973
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.24 E-value=1e-05 Score=87.29 Aligned_cols=119 Identities=11% Similarity=0.047 Sum_probs=85.8
Q ss_pred hhccCCCCHHHHHHHhccC-------CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccE
Q 008499 368 SGVLKGINLEDIKKAGERL-------SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFS 440 (563)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~i-------~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~ 440 (563)
.-.|+|++.+++++.++.+ .+++. .++..+..| .++|||++- ..+++..++.-++.+.|++++++
T Consensus 70 ~v~f~Gl~~~die~vaRavlpkf~~~dv~~e---~~~~~~~~g----~~vVVTAsP-rvmVEpFake~LG~D~VvGTEL~ 141 (498)
T PLN02499 70 FVATAGVHESEIESVARAVLPKFYMDDVDME---AWKVFSSCD----KRVVVTRMP-RVMVERFAKEHLRADEVIGSELV 141 (498)
T ss_pred HHHhCCCCHHHHHHHHHHHhhHHHHhhCCHH---HHHHHHcCC----eEEEEeCCH-HHHHHHHHHHhcCCceEEeeeEE
Confidence 4678999999998877632 33444 455555544 889999973 66777777654555778999999
Q ss_pred ecC-ccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 441 FKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 441 ~~~-g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
+.+ |.+||.+.+.+| +..|.+++++.... ....+-+||+.+|-..+..+- ++.+
T Consensus 142 v~~~G~~TG~~~G~n~-~ek~~~rl~~~~g~-----~~~~vg~~~~~~~~~f~~~ck-~~~~ 196 (498)
T PLN02499 142 VNRFGFATGFIRGTDV-DQSVANRVANLFVD-----ERPQLGLGRISASSSFLSLCK-EQIH 196 (498)
T ss_pred EeeccEEEEEEecCcc-HHHHHHHHHHHhCc-----cCceecccCCcccchhhhhCc-eEEe
Confidence 985 999999987665 43447777776531 235788999999999888876 5555
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.9e-06 Score=94.08 Aligned_cols=94 Identities=24% Similarity=0.340 Sum_probs=74.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
...+|||+.++++.++++| ++++|+|+. .....+.+++. |++ ++++- .+.+|.+.
T Consensus 403 ~d~l~~~a~e~i~~Lk~~G---i~v~ilSgd-~~~~a~~ia~~lgi~---~~~~~-----------------~p~~K~~~ 458 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRG---IEPVMLTGD-NRKTAKAVAKELGIN---VRAEV-----------------LPDDKAAL 458 (562)
T ss_pred cccccHHHHHHHHHHHHcC---CeEEEEcCC-CHHHHHHHHHHcCCc---EEccC-----------------ChHHHHHH
Confidence 3579999999999999999 999999998 57777777665 552 33221 23478888
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhH
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 507 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L 507 (563)
++++..+ +.+++|||||.||.+++..||+||.++....+
T Consensus 459 v~~l~~~-----~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~ 497 (562)
T TIGR01511 459 IKELQEK-----GRVVAMVGDGINDAPALAQADVGIAIGAGTDV 497 (562)
T ss_pred HHHHHHc-----CCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH
Confidence 8888752 46899999999999999999999999855433
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.7e-06 Score=94.40 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=77.2
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
++|||..+.++.|++.| +.++++|+- +..-...+-++ |++ +++| .+++.+|.+.++
T Consensus 445 ~~R~~~~eai~~Lr~~G---I~vvMiTGD-n~~TA~aIA~elGId--~v~A-----------------~~~PedK~~iV~ 501 (679)
T PRK01122 445 IVKPGIKERFAELRKMG---IKTVMITGD-NPLTAAAIAAEAGVD--DFLA-----------------EATPEDKLALIR 501 (679)
T ss_pred cCchhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCc--EEEc-----------------cCCHHHHHHHHH
Confidence 78999999999999999 999999985 34333333332 542 2222 135678999999
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhH
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 526 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~ 526 (563)
++.++ +..|.++|||.||-++|..|||||+++..+.++ ++- -+++=+++++.
T Consensus 502 ~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA---keA-ADiVLldd~~s 553 (679)
T PRK01122 502 QEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA---KEA-GNMVDLDSNPT 553 (679)
T ss_pred HHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH---HHh-CCEEEeCCCHH
Confidence 98863 356789999999999999999999999654333 222 24555554443
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=98.19 E-value=4e-05 Score=74.60 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=66.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChH--hhHHHHhCCCC--cceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD--LIRASFSSGLN--ALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~--~I~~~L~~~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
.+.+.||+.++++.|+++| +++.|+|.++... .+......++. ...|++.. ..+..|
T Consensus 92 ~~~~~~~~~~~L~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~----------------~~~~~K 152 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKG---FKTACITNNFPTDHSAEEALLPGDIMALFDAVVESC----------------LEGLRK 152 (211)
T ss_pred ccccChhHHHHHHHHHHCC---CeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEee----------------ecCCCC
Confidence 5789999999999999988 9999999874221 11111111221 11222111 011123
Q ss_pred --HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCChhHH
Q 008499 461 --VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLR 508 (563)
Q Consensus 461 --~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~~L~ 508 (563)
...+...+++.+. .+..+++|||+..|+.+...+|+ .|.+.+...+.
T Consensus 153 P~p~~~~~~~~~~g~-~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~ 202 (211)
T TIGR02247 153 PDPRIYQLMLERLGV-APEECVFLDDLGSNLKPAAALGITTIKVSDEEQAI 202 (211)
T ss_pred CCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 3466666666665 35789999999999999999999 55555444444
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.5e-05 Score=73.42 Aligned_cols=93 Identities=13% Similarity=0.038 Sum_probs=64.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.|| .+++..+++ + +++.|+|++. ...++..|++ ++.. ..|++.+ .....--+.
T Consensus 86 ~~~~~~~-~e~L~~L~~-~---~~l~I~T~~~-~~~~~~~l~~~~l~~~fd~i~~~~--------------~~~~~KP~p 145 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHG-R---RPMAVGTGSE-SAIAEALLAHLGLRRYFDAVVAAD--------------DVQHHKPAP 145 (188)
T ss_pred cCCCccH-HHHHHHHHh-C---CCEEEEcCCc-hHHHHHHHHhCCcHhHceEEEehh--------------hccCCCCCh
Confidence 4566676 588988875 3 6899999984 7788888876 5532 1222211 001122355
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+.....+.+.. +.+++||||+..|+.+...||+.
T Consensus 146 ~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 146 DTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence 6777777777653 57899999999999999999984
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.1e-05 Score=78.29 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=55.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcccc---ChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW---CGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gw---s~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
..+.+++.+|+++++++| ++++|||+.. ....++.+++. |++.. + ...+ +|.-..+ .-.+|.
T Consensus 113 s~p~~~a~elL~~l~~~G---~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f--~~i~-----~~d~~~~--~Kp~~~ 178 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRG---DAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--N--PVIF-----AGDKPGQ--YQYTKT 178 (237)
T ss_pred CcchhHHHHHHHHHHHCC---CEEEEEeCCCCCcCHHHHHHHHHHhCCchh--e--eEEE-----CCCCCCC--CCCCHH
Confidence 355566999999999999 9999999852 13466666655 66431 1 1112 2211111 011343
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
. .+.++ ..++||||+.+|+.+.+.|++
T Consensus 179 ~----~l~~~-----~i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 179 Q----WIQDK-----NIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred H----HHHhC-----CCeEEEeCCHHHHHHHHHCCC
Confidence 2 23322 247999999999999999998
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=5.6e-06 Score=93.71 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=77.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-++|||..+.++.|++.| +.++++|+- +..-...+-++ |+. ++++ -+++.+|.+.+
T Consensus 440 Dp~R~~a~e~I~~Lr~~G---I~vvMiTGD-n~~TA~aIA~elGI~--~v~A-----------------~~~PedK~~iV 496 (673)
T PRK14010 440 DVIKDGLVERFRELREMG---IETVMCTGD-NELTAATIAKEAGVD--RFVA-----------------ECKPEDKINVI 496 (673)
T ss_pred cCCcHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCc--eEEc-----------------CCCHHHHHHHH
Confidence 389999999999999999 999999985 33333333222 442 2222 13567999999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhH
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 526 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~ 526 (563)
+++.++ +..|.++|||.||-++|..||+||+++....++ ++- -.++=+++++.
T Consensus 497 ~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA---keA-ADiVLldd~ls 549 (673)
T PRK14010 497 REEQAK-----GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSA---KEA-ANLIDLDSNPT 549 (673)
T ss_pred HHHHhC-----CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHH---HHh-CCEEEcCCCHH
Confidence 998763 356779999999999999999999999554433 222 25666655443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.3e-06 Score=92.59 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=72.4
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-.+||+..+.++.|++.| +.++++|+- +..-.+.+-++ |+ .+++++ ..+.+|.+.+
T Consensus 536 D~~R~~a~~aI~~L~~~G---i~~~mLTGD-n~~~A~~iA~~lGI--d~v~Ae-----------------llPedK~~~V 592 (713)
T COG2217 536 DELRPDAKEAIAALKALG---IKVVMLTGD-NRRTAEAIAKELGI--DEVRAE-----------------LLPEDKAEIV 592 (713)
T ss_pred CCCChhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCh--Hhhecc-----------------CCcHHHHHHH
Confidence 489999999999999999 999999985 45444444333 43 333333 2456899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
+++.++ +..+.+||||.||-|+|..||+||+|+..+
T Consensus 593 ~~l~~~-----g~~VamVGDGINDAPALA~AdVGiAmG~Gt 628 (713)
T COG2217 593 RELQAE-----GRKVAMVGDGINDAPALAAADVGIAMGSGT 628 (713)
T ss_pred HHHHhc-----CCEEEEEeCCchhHHHHhhcCeeEeecCCc
Confidence 999853 467899999999999999999999999653
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00012 Score=87.64 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=69.2
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC---cceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN---ALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~---~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
.+.||+.++++.|+++| +++.|+|.+ ....++..|+. ++. ...|++.+- ...+--+..
T Consensus 161 ~~~pG~~elL~~Lk~~G---~~l~IvSn~-~~~~~~~~L~~~gl~~~~Fd~iv~~~~--------------~~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKG---LKVAVASSA-DRIKVDANLAAAGLPLSMFDAIVSADA--------------FENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCC---CeEEEEeCC-cHHHHHHHHHHcCCChhHCCEEEECcc--------------cccCCCCHH
Confidence 47899999999999999 999999988 47778888876 653 122222210 001112346
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
.+...+++.+.. +.++++|||+.+|+.+.+.|++- |.+.
T Consensus 223 ~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~ 262 (1057)
T PLN02919 223 IFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVT 262 (1057)
T ss_pred HHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 667777777653 57899999999999999999983 4443
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=98.07 E-value=5e-06 Score=80.49 Aligned_cols=88 Identities=20% Similarity=0.207 Sum_probs=62.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc--H
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK--V 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~ 461 (563)
..++|||..++++.|++.| +++.|+|+. +......+... |+....|+++.. ..+..| .
T Consensus 125 ~d~~~~~~~~~l~~L~~~G---i~~~i~TGD-~~~~a~~~~~~lgi~~~~v~a~~~---------------~kP~~k~~~ 185 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAG---IKVAILTGD-NESTASAIAKQLGIFDSIVFARVI---------------GKPEPKIFL 185 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTT---EEEEEEESS-EHHHHHHHHHHTTSCSEEEEESHE---------------TTTHHHHHH
T ss_pred cCcchhhhhhhhhhhhccC---cceeeeecc-cccccccccccccccccccccccc---------------ccccchhHH
Confidence 4589999999999999999 999999986 45555555554 664333444432 233456 4
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
++++++ +. .+..+++||||.||.+|++.||
T Consensus 186 ~~i~~l----~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 186 RIIKEL----QV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHH----TC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHHHH----hc-CCCEEEEEccCHHHHHHHHhCc
Confidence 444443 32 2358999999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.5e-05 Score=93.60 Aligned_cols=111 Identities=17% Similarity=0.225 Sum_probs=73.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEee-ccEe-cCccccC-----cccccCCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHAN-EFSF-KESISTG-----EIIEKVESP 457 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN-~l~~-~~g~~tG-----~~~~~~~~g 457 (563)
-++||+..+.++.|++.| +.+.+||+- +..-...+-++ |+...++++. ++.- ++..+.. .+-. -+++
T Consensus 514 Dp~R~~~~~aI~~l~~aG---I~vvmiTGD-~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA-r~~P 588 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNG---INVKVLTGD-NEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFA-RLTP 588 (867)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE-ECCH
Confidence 489999999999999999 999999985 33333333233 6642223221 1110 0000000 0111 2567
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChh
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 506 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~ 506 (563)
.+|.++++.+.+. +..|.++|||.||.++|+.||+||+++..+.
T Consensus 589 e~K~~iV~~lq~~-----G~vVam~GDGvNDapALk~AdVGIAmg~gtd 632 (867)
T TIGR01524 589 MQKSRIIGLLKKA-----GHTVGFLGDGINDAPALRKADVGISVDTAAD 632 (867)
T ss_pred HHHHHHHHHHHhC-----CCEEEEECCCcccHHHHHhCCEEEEeCCccH
Confidence 8999999998763 3567799999999999999999999985443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00024 Score=70.75 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=60.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.|++ + +++.|+|.| +... .. |+.. ..|++.+ .+ ...--+.
T Consensus 111 ~~~~~~gv~~~L~~L~~-~---~~l~i~Tn~-~~~~-----~~~gl~~~fd~i~~~~----------~~----~~~KP~p 166 (238)
T PRK10748 111 RIDVPQATHDTLKQLAK-K---WPLVAITNG-NAQP-----ELFGLGDYFEFVLRAG----------PH----GRSKPFS 166 (238)
T ss_pred cCCCCccHHHHHHHHHc-C---CCEEEEECC-CchH-----HHCCcHHhhceeEecc----------cC----CcCCCcH
Confidence 57888999999999985 4 789999987 3331 22 4321 1222211 00 0111245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCcc-EEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-ivi 501 (563)
..+...++..+. .+..+++|||+ ..|+.+...+|+- |.+
T Consensus 167 ~~~~~a~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 167 DMYHLAAEKLNV-PIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHcCC-ChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 667776766665 35789999999 5999999999984 434
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.1e-05 Score=72.00 Aligned_cols=126 Identities=21% Similarity=0.300 Sum_probs=89.9
Q ss_pred CCCCHHHHHHHhcc-CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-----c
Q 008499 372 KGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-----S 444 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~-i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-----g 444 (563)
.|++.++++++.+. ..|-||+.+.++.+++. ++-+|+|.++ ..+++..-+. |++--+++|.++.+|+ +
T Consensus 67 hGVt~~dlrr~sE~sa~lvPgA~etm~~l~~~----~tp~v~STSY-~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~Pee 141 (315)
T COG4030 67 HGVTNRDLRRISELSAKLVPGAEETMATLQER----WTPVVISTSY-TQYLRRTASMIGVPRGELHGTEVDLDSIAVPEE 141 (315)
T ss_pred hcCcHHHHHHHHHhhcccCCChHHHHHHHhcc----CCceEEeccH-HHHHHHHHHhcCCCccccccccccCccccCChH
Confidence 68999999999885 89999999999999875 5778999986 5566665444 6766678888888772 1
Q ss_pred -c------------ccCc--------------------cc--ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCch
Q 008499 445 -I------------STGE--------------------II--EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDL 489 (563)
Q Consensus 445 -~------------~tG~--------------------~~--~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl 489 (563)
. ..|+ +. -+...|..|.++++.++.-.+. +..+++||||++|.
T Consensus 142 eR~E~L~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~--d~sa~~VGDSItDv 219 (315)
T COG4030 142 EREELLSIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGI--DFSAVVVGDSITDV 219 (315)
T ss_pred HHHHHHHhcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCC--CcceeEecCcccch
Confidence 0 1121 11 0244566778888887765443 23478999999999
Q ss_pred HHhhhcC----ccEEEcCC
Q 008499 490 LCLLEAD----IGIVIGSS 504 (563)
Q Consensus 490 ~~l~~Ad----~givi~~~ 504 (563)
.||+.+. +.|.|+.+
T Consensus 220 ~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 220 KMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHhhccCceEEEecCC
Confidence 9999973 34555544
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=97.97 E-value=9.6e-05 Score=72.67 Aligned_cols=100 Identities=9% Similarity=0.112 Sum_probs=62.1
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHH-HHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA-SFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~-~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
....+.||+.++++.|+++| +++.|+|++. ...+.. .+.. ++.. ..++|.+ + ..+..+--
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g---~~~~i~S~~~-~~~~~~~~~~~~~l~~~f~~i~~~~----~--------~~~~~~KP 138 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKG---IPIAIATGSH-KRHFDLKTQRHGELFSLMHHVVTGD----D--------PEVKQGKP 138 (220)
T ss_pred hhCCCCccHHHHHHHHHHCC---CcEEEEeCCc-hhhHHHHHcccHHHHhhCCEEEECC----h--------hhccCCCC
Confidence 35788999999999999988 9999999874 333332 2221 2211 1222211 0 00001111
Q ss_pred cHHHHHHHHHHhC---CCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 460 KVQAFNNTLEKYG---TDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 460 K~~~l~~~~~~~~---~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
+...+...+++.+ . .+..++||||+..|+.+.+.||+.++
T Consensus 139 ~p~~~~~a~~~~~~~~~-~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 139 APDIFLAAARRFEDGPV-DPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CcHHHHHHHHHhCCCCC-CccceEEEeccHhhHHHHHHCCCeEE
Confidence 2345555555553 3 35789999999999999999999433
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.8e-05 Score=88.22 Aligned_cols=90 Identities=22% Similarity=0.280 Sum_probs=72.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCC-cEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNA-NVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~-~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
.-.+|||..+.++.|+++| + ++.|+|+. .....+.++++ |++ +++++ ..+.+|..
T Consensus 360 ~d~l~~~~~e~i~~L~~~G---i~~v~vvTgd-~~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~ 416 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALG---IEKVVMLTGD-RRAVAERVARELGID--EVHAE-----------------LLPEDKLE 416 (536)
T ss_pred eccchHHHHHHHHHHHHcC---CCcEEEEcCC-CHHHHHHHHHHcCCh--hhhhc-----------------cCcHHHHH
Confidence 4589999999999999999 9 99999998 46777777765 552 12211 12457888
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.++++..+ +.+++|||||.||.++++.||+||.++
T Consensus 417 ~i~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g 451 (536)
T TIGR01512 417 IVKELREK-----YGPVAMVGDGINDAPALAAADVGIAMG 451 (536)
T ss_pred HHHHHHhc-----CCEEEEEeCCHHHHHHHHhCCEEEEeC
Confidence 88888753 367999999999999999999999998
|
. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.9e-05 Score=91.46 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=73.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEE-eeccEecC--cccc-Cc---------cc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVH-ANEFSFKE--SIST-GE---------II 451 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~-aN~l~~~~--g~~t-G~---------~~ 451 (563)
-++||+..+.++.|++.| +.++++|+- +......+-++ |+... ++ ++++.-.+ ...+ ++ +-
T Consensus 441 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 515 (755)
T TIGR01647 441 DPPRHDTKETIERARHLG---VEVKMVTGD-HLAIAKETARRLGLGTN-IYTADVLLKGDNRDDLPSGELGEMVEDADGF 515 (755)
T ss_pred CCChhhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCC-CcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence 389999999999999999 999999986 44444444444 66421 22 12211000 0000 00 11
Q ss_pred ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 452 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 452 ~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
. -+++.+|.++++.+.+. +..|.++|||.||.++|+.||+||+++..+
T Consensus 516 A-r~~Pe~K~~iV~~lq~~-----G~~VamvGDGvNDapAL~~AdVGIAm~~gt 563 (755)
T TIGR01647 516 A-EVFPEHKYEIVEILQKR-----GHLVGMTGDGVNDAPALKKADVGIAVAGAT 563 (755)
T ss_pred E-ecCHHHHHHHHHHHHhc-----CCEEEEEcCCcccHHHHHhCCeeEEecCCc
Confidence 1 24667999999998763 456889999999999999999999998544
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.4e-05 Score=90.41 Aligned_cols=92 Identities=21% Similarity=0.237 Sum_probs=71.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.-++|||..+.++.|++.| ++++++|+- +....+.+.+. |+. ++++ ..+.+|...
T Consensus 566 ~d~~r~~a~~~i~~L~~~g---i~~~llTGd-~~~~a~~ia~~lgi~---~~~~-----------------~~p~~K~~~ 621 (741)
T PRK11033 566 QDTLRADARQAISELKALG---IKGVMLTGD-NPRAAAAIAGELGID---FRAG-----------------LLPEDKVKA 621 (741)
T ss_pred ecCCchhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCC---eecC-----------------CCHHHHHHH
Confidence 3589999999999999999 999999986 45566665554 552 2211 234589999
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChh
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 506 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~ 506 (563)
++++.+ ..++.+||||.||.++|..||+||.++..+.
T Consensus 622 v~~l~~------~~~v~mvGDgiNDapAl~~A~vgia~g~~~~ 658 (741)
T PRK11033 622 VTELNQ------HAPLAMVGDGINDAPAMKAASIGIAMGSGTD 658 (741)
T ss_pred HHHHhc------CCCEEEEECCHHhHHHHHhCCeeEEecCCCH
Confidence 998764 2479999999999999999999999985543
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.1e-05 Score=71.16 Aligned_cols=84 Identities=19% Similarity=0.330 Sum_probs=65.3
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
.++.|+++| +.+.|+|++. ...+...++. |+. .++. | ...|...+.+++...+.
T Consensus 36 ~i~~Lk~~G---~~i~IvTn~~-~~~~~~~l~~~gi~--~~~~-----------~--------~~~k~~~~~~~~~~~~~ 90 (154)
T TIGR01670 36 GIRCALKSG---IEVAIITGRK-AKLVEDRCKTLGIT--HLYQ-----------G--------QSNKLIAFSDILEKLAL 90 (154)
T ss_pred HHHHHHHCC---CEEEEEECCC-CHHHHHHHHHcCCC--EEEe-----------c--------ccchHHHHHHHHHHcCC
Confidence 688889888 9999999984 6677777765 553 2221 1 12488889999887775
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
. ...++|||||.+|+.|+..|++++++++.
T Consensus 91 ~-~~~~~~vGDs~~D~~~~~~ag~~~~v~~~ 120 (154)
T TIGR01670 91 A-PENVAYIGDDLIDWPVMEKVGLSVAVADA 120 (154)
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCeEecCCc
Confidence 3 47899999999999999999999988744
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.3e-05 Score=92.31 Aligned_cols=110 Identities=15% Similarity=0.206 Sum_probs=73.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEe-eccEe-cCcccc-----CcccccCCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHA-NEFSF-KESIST-----GEIIEKVESP 457 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~a-N~l~~-~~g~~t-----G~~~~~~~~g 457 (563)
-++||+..+.++.|++.| +.++++|+- +..-...+-++ |+....+++ .++.- ++..+. -.+-. -+++
T Consensus 549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~sP 623 (902)
T PRK10517 549 DPPKETTAPALKALKASG---VTVKILTGD-SELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RLTP 623 (902)
T ss_pred CcchhhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-EcCH
Confidence 489999999999999999 999999985 33333333333 664323322 22211 000000 00111 2467
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
.+|.++++.+.+. +..|.++|||.||.++|+.|||||.++...
T Consensus 624 e~K~~IV~~Lq~~-----G~vVam~GDGvNDaPALk~ADVGIAmg~gt 666 (902)
T PRK10517 624 MHKERIVTLLKRE-----GHVVGFMGDGINDAPALRAADIGISVDGAV 666 (902)
T ss_pred HHHHHHHHHHHHC-----CCEEEEECCCcchHHHHHhCCEEEEeCCcC
Confidence 8999999998863 356779999999999999999999998543
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.8e-05 Score=91.65 Aligned_cols=112 Identities=16% Similarity=0.232 Sum_probs=73.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEE-eeccEe-cCccccC-----cccccCCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVH-ANEFSF-KESISTG-----EIIEKVESP 457 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~-aN~l~~-~~g~~tG-----~~~~~~~~g 457 (563)
-++||+..+.++.|++.| +.+++||+- +..-...+-++ |+....++ ..++.. ++..+.. .+-. -+++
T Consensus 549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfA-r~sP 623 (903)
T PRK15122 549 DPPKESAAPAIAALRENG---VAVKVLTGD-NPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFA-KLTP 623 (903)
T ss_pred CccHHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEE-EeCH
Confidence 489999999999999999 999999985 33333333333 66322222 112111 0000000 0111 2466
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhH
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 507 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L 507 (563)
.+|.++++.+.+. +..|.++|||.||.++|+.|||||+++..+.+
T Consensus 624 e~K~~iV~~Lq~~-----G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv 668 (903)
T PRK15122 624 LQKSRVLKALQAN-----GHTVGFLGDGINDAPALRDADVGISVDSGADI 668 (903)
T ss_pred HHHHHHHHHHHhC-----CCEEEEECCCchhHHHHHhCCEEEEeCcccHH
Confidence 7999999998863 35677999999999999999999999854433
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.3e-05 Score=72.95 Aligned_cols=90 Identities=13% Similarity=0.267 Sum_probs=66.7
Q ss_pred HHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCC
Q 008499 396 FQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474 (563)
Q Consensus 396 l~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~ 474 (563)
++.|+++| +++.|+|.+ +...++..+.. ++. +++. + ...|...++.+++..+..
T Consensus 43 ~~~L~~~G---i~laIiT~k-~~~~~~~~l~~lgi~--~~f~-------~------------~kpkp~~~~~~~~~l~~~ 97 (169)
T TIGR02726 43 VIVLQLCG---IDVAIITSK-KSGAVRHRAEELKIK--RFHE-------G------------IKKKTEPYAQMLEEMNIS 97 (169)
T ss_pred HHHHHHCC---CEEEEEECC-CcHHHHHHHHHCCCc--EEEe-------c------------CCCCHHHHHHHHHHcCcC
Confidence 34456667 999999998 57788888876 553 1111 0 025778888888887653
Q ss_pred CCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHH
Q 008499 475 RKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 511 (563)
Q Consensus 475 ~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~ 511 (563)
..+++||||+.||+.|++.|++++++++ .+.++..+
T Consensus 98 -~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A 134 (169)
T TIGR02726 98 -DAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA 134 (169)
T ss_pred -HHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence 4789999999999999999999999974 45565554
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=8.8e-05 Score=73.80 Aligned_cols=89 Identities=17% Similarity=0.165 Sum_probs=57.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccc---cChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYC---WCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~g---ws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
..+.||+.++++.++++| +++++||+- -....++..++. |++..+.+ .+. ++|.- ..-.+|.
T Consensus 113 a~p~~Ga~elL~~L~~~G---~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f--~vi-----l~gd~----~~K~~K~ 178 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRG---DSIYFITGRTATKTETVSKTLADDFHIPADNMN--PVI-----FAGDK----PGQYTKT 178 (237)
T ss_pred CcchHHHHHHHHHHHHCC---CeEEEEeCCCCcccHHHHHHHHHHcCCCcccce--eEE-----EcCCC----CCCCCHH
Confidence 568888999999999999 999999972 123455555543 66323211 111 22221 1123455
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
..++ ++ ..+|||||+.+|+.+...||+
T Consensus 179 ~~l~----~~-----~i~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 179 QWLK----KK-----NIRIFYGDSDNDITAAREAGA 205 (237)
T ss_pred HHHH----hc-----CCeEEEcCCHHHHHHHHHcCC
Confidence 4433 22 248999999999999999998
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.3e-05 Score=89.34 Aligned_cols=107 Identities=20% Similarity=0.170 Sum_probs=71.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEE-eeccEec-Ccccc-----CcccccCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVH-ANEFSFK-ESIST-----GEIIEKVE 455 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~-aN~l~~~-~g~~t-----G~~~~~~~ 455 (563)
-++||+..+.++.|++.| +.+.++|+- ...-...+-++ |+.. ..++ .+++.-- +.... -.+-. -+
T Consensus 578 Dplr~~~~~aI~~l~~aG---I~v~miTGD-~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfa-r~ 652 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAG---ITVRMVTGD-NIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLA-RS 652 (941)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEECCC-ChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEE-EC
Confidence 389999999999999999 999999985 33333333223 5521 1111 2222100 00000 01111 25
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++.+|.++++.+.+. +..|.++|||.||.++|+.|||||+++
T Consensus 653 sPe~K~~iV~~lq~~-----g~vVam~GDGvNDapALk~AdVGIAmg 694 (941)
T TIGR01517 653 SPLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSMG 694 (941)
T ss_pred CHHHHHHHHHHHHHC-----CCEEEEECCCCchHHHHHhCCcceecC
Confidence 678999999998763 356889999999999999999999998
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.5e-05 Score=91.18 Aligned_cols=108 Identities=21% Similarity=0.246 Sum_probs=72.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEe-cCccccCccc------------
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSF-KESISTGEII------------ 451 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~-~~g~~tG~~~------------ 451 (563)
-++||+..+.++.|++.| +.+.+||+. ...-...+-++ |+.....+.+.-.. ++.+.||.-.
T Consensus 645 Dp~r~~v~~aI~~l~~aG---Ikv~MiTGD-~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~ 720 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAG---INVHMLTGD-FPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK 720 (1053)
T ss_pred cCCchhHHHHHHHHHHCC---CEEEEECCC-CHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh
Confidence 489999999999999999 999999986 34444444333 65321111110000 0112333110
Q ss_pred -----ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 452 -----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 452 -----~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
---+++.+|.++++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 721 ~~~~V~ar~sP~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 721 ALCLVIARCAPQTKVKMIEALHRR-----KAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred hcCeEEEecCHHHHHHHHHHHHhc-----CCeeEEeCCCcchHHHHHhCCccEecC
Confidence 0124567999999988763 356789999999999999999999997
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00011 Score=69.63 Aligned_cols=107 Identities=12% Similarity=0.139 Sum_probs=67.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcceEEeeccEecCccccC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALNVHANEFSFKESISTG 448 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG 448 (563)
++.+.||+.++++.|+++| ++++|+|.+ +. ..+...+.. ++....++...-...+ .+
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G---~~l~i~TN~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~---~~ 96 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMG---YALVLVTNQ-SGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG---VE 96 (176)
T ss_pred HeEECCCHHHHHHHHHHCC---CEEEEEeCC-ccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc---cc
Confidence 3468899999999999999 999999976 32 233334443 3332222221111110 12
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
++......+--+...+...+++.+.+ ..++++|||+.+|+.+...|++..
T Consensus 97 ~~~~~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 97 EFRQVCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred cccCCCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcE
Confidence 22112222333567777777777653 578999999999999999999854
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00032 Score=69.22 Aligned_cols=99 Identities=17% Similarity=0.163 Sum_probs=66.0
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc-c--eEEeeccEecCccccCcccccCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA-L--NVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~-~--~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
.+.+.+.||+.+++..|+++| +++.+.|++ ....++..|.. |+.. . .|.+.+ ...|+-.+
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~---i~~avaS~s-~~~~~~~~L~~~gl~~~f~~~v~~~d------v~~~KP~P------ 145 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARG---IPLAVASSS-PRRAAERVLARLGLLDYFDVIVTADD------VARGKPAP------ 145 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcC---CcEEEecCC-hHHHHHHHHHHccChhhcchhccHHH------HhcCCCCC------
Confidence 457899999999999999998 999999988 46678888876 5421 1 111111 11121111
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
--++.. .++.+. .+.++|.|.||.+.+.+.+.||.-++.
T Consensus 146 --d~yL~A-a~~Lgv-~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 146 --DIYLLA-AERLGV-DPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred --HHHHHH-HHHcCC-ChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 122222 333333 357999999999999999999984443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.79 E-value=7.1e-05 Score=83.99 Aligned_cols=97 Identities=23% Similarity=0.337 Sum_probs=73.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
+-.++||+.+.++.|+++| .+++.|+|+. .....+.++++ |+. +++++ +.+.+|...
T Consensus 382 ~d~~~~g~~e~l~~L~~~g--~i~v~ivTgd-~~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~~ 439 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAG--GIKLVMLTGD-NRSAAEAVAAELGID--EVHAE-----------------LLPEDKLAI 439 (556)
T ss_pred cccchHhHHHHHHHHHHcC--CCeEEEEeCC-CHHHHHHHHHHhCCC--eeecc-----------------CCHHHHHHH
Confidence 4689999999999998753 1789999987 57777777766 652 22221 123478888
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHH
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 508 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~ 508 (563)
++++... +.+++|||||.||.+++..||+||.++..+.+.
T Consensus 440 v~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 479 (556)
T TIGR01525 440 VKELQEE-----GGVVAMVGDGINDAPALAAADVGIAMGAGSDVA 479 (556)
T ss_pred HHHHHHc-----CCEEEEEECChhHHHHHhhCCEeEEeCCCCHHH
Confidence 8887752 358999999999999999999999998544443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.78 E-value=5.5e-05 Score=89.29 Aligned_cols=106 Identities=15% Similarity=0.248 Sum_probs=71.7
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ce-EEeeccEe-cCcccc-----CcccccCCC
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LN-VHANEFSF-KESIST-----GEIIEKVES 456 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~-I~aN~l~~-~~g~~t-----G~~~~~~~~ 456 (563)
++|||..+.++.|++.| +.+.++|+- +..-...+.+. |+.. .. +-+.++.- ++.... -.+-. -++
T Consensus 528 p~r~~~~~~i~~l~~~G---i~v~miTGD-~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfa-r~~ 602 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGG---VRIIMITGD-SQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFA-RAS 602 (884)
T ss_pred cchhHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEE-ECC
Confidence 88999999999999999 999999986 45555555444 6531 11 11222210 000000 00111 145
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
+.+|.++++.+... +..+.++|||.||.++|+.||+||.++
T Consensus 603 P~~K~~iv~~lq~~-----g~~v~mvGDGvND~pAl~~AdVGia~g 643 (884)
T TIGR01522 603 PEHKMKIVKALQKR-----GDVVAMTGDGVNDAPALKLADIGVAMG 643 (884)
T ss_pred HHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHHhCCeeEecC
Confidence 67899998887752 467889999999999999999999997
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=7.5e-05 Score=87.72 Aligned_cols=92 Identities=23% Similarity=0.292 Sum_probs=71.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-.+|||..+.++.+++.| +++.++|+. +....+.+++. |+. +++++ ..+.+|.+.+
T Consensus 649 d~~r~~a~~~i~~L~~~g---i~v~~~Tgd-~~~~a~~ia~~lgi~--~~~~~-----------------~~p~~K~~~i 705 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAG---YRLVMLTGD-NPTTANAIAKEAGID--EVIAG-----------------VLPDGKAEAI 705 (834)
T ss_pred CcchhhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCCC--EEEeC-----------------CCHHHHHHHH
Confidence 478999999999999998 999999987 46666666655 553 33321 1234699988
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
+++..+ +..+++||||.||.+++..||+||.+++.+
T Consensus 706 ~~l~~~-----~~~v~~vGDg~nD~~al~~Agvgia~g~g~ 741 (834)
T PRK10671 706 KRLQSQ-----GRQVAMVGDGINDAPALAQADVGIAMGGGS 741 (834)
T ss_pred HHHhhc-----CCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence 887652 457999999999999999999999998553
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00013 Score=69.91 Aligned_cols=84 Identities=18% Similarity=0.368 Sum_probs=62.4
Q ss_pred HHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCC
Q 008499 396 FQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474 (563)
Q Consensus 396 l~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~ 474 (563)
++.++++| +++.|+|+. ....+..+++. ++. +++. | ...|...++++++..+..
T Consensus 57 i~~L~~~G---i~v~I~T~~-~~~~v~~~l~~lgl~--~~f~-----------g--------~~~k~~~l~~~~~~~gl~ 111 (183)
T PRK09484 57 IRCLLTSG---IEVAIITGR-KSKLVEDRMTTLGIT--HLYQ-----------G--------QSNKLIAFSDLLEKLAIA 111 (183)
T ss_pred HHHHHHCC---CEEEEEeCC-CcHHHHHHHHHcCCc--eeec-----------C--------CCcHHHHHHHHHHHhCCC
Confidence 34455677 999999998 46777777765 542 2221 1 235888999999887763
Q ss_pred CCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 475 RKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 475 ~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
...++|||||.+|+.|+..|++++++++..
T Consensus 112 -~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 112 -PEQVAYIGDDLIDWPVMEKVGLSVAVADAH 141 (183)
T ss_pred -HHHEEEECCCHHHHHHHHHCCCeEecCChh
Confidence 578999999999999999999998776443
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00033 Score=62.91 Aligned_cols=95 Identities=16% Similarity=0.190 Sum_probs=66.5
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccC-------hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCC
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC-------GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws-------~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
.+.||+.++++.|+++| ++++|+|.+.. .+.++..++. ++....++ .++. ...
T Consensus 25 ~~~~~v~~~l~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~------~~K 85 (132)
T TIGR01662 25 ILYPEVPDALAELKEAG---YKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLY----------ACPH------CRK 85 (132)
T ss_pred eeCCCHHHHHHHHHHCC---CEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEE----------ECCC------CCC
Confidence 47899999999999988 99999998730 4566777765 54311111 1110 111
Q ss_pred CcHHHHHHHHHHhC-CCCCccEEEEcC-CcCchHHhhhcCc-cEEE
Q 008499 459 DKVQAFNNTLEKYG-TDRKNLSVYIGD-SVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 459 ~K~~~l~~~~~~~~-~~~~~~viyiGD-s~~Dl~~l~~Ad~-givi 501 (563)
-|...+..+++..+ . .+.+++|||| +.+|+.++..+++ +|.+
T Consensus 86 P~~~~~~~~~~~~~~~-~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~ 130 (132)
T TIGR01662 86 PKPGMFLEALKRFNEI-DPEESVYVGDQDLTDLQAAKRAGLAFILV 130 (132)
T ss_pred CChHHHHHHHHHcCCC-ChhheEEEcCCCcccHHHHHHCCCeEEEe
Confidence 25577777887773 5 3578999999 7999999999998 4444
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=5.2e-05 Score=76.77 Aligned_cols=56 Identities=21% Similarity=0.391 Sum_probs=48.6
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
..+.+|...++.+++.++.+ ..+++++|||.||++|++.|++||+++ +.+.+++.|
T Consensus 192 ~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A 248 (270)
T PRK10513 192 DKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVA 248 (270)
T ss_pred CCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhc
Confidence 34678999999999988874 478999999999999999999999998 456777776
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00094 Score=67.59 Aligned_cols=114 Identities=14% Similarity=0.182 Sum_probs=70.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh---hHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL---IRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~---I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
...+-||+.+|++.++++| ++++|||.. +... ....|.. |++... -..+.+.+ ....|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G---~~v~iVTnR-~~~~~~~T~~~Lkk~Gi~~~~--~d~lllr~------------~~~~K 177 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKG---VKIFYVSNR-SEKEKAATLKNLKRFGFPQAD--EEHLLLKK------------DKSSK 177 (266)
T ss_pred CCCcCccHHHHHHHHHHCC---CeEEEEeCC-CcchHHHHHHHHHHcCcCCCC--cceEEeCC------------CCCCc
Confidence 4568899999999999999 999999986 3222 3344444 554210 01111111 12357
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecCc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~~ 523 (563)
..+++.+.+.+ ..+++|||..+|+.-....+ .--. ....+.+...++|-+|+-|.+
T Consensus 178 ~~rr~~I~~~y-----~Ivl~vGD~~~Df~~~~~~~--~~~~~r~~~v~~~~~~fG~~~i~lPN 234 (266)
T TIGR01533 178 ESRRQKVQKDY-----EIVLLFGDNLLDFDDFFYKD--KESQDRQALVLQNQEKFGKKFIILPN 234 (266)
T ss_pred HHHHHHHHhcC-----CEEEEECCCHHHhhhhhccC--cchHHHHHHHHHHHHHhCCCeEEecC
Confidence 77777666532 34789999999995433322 0100 123467777889999987654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=6.6e-05 Score=75.85 Aligned_cols=57 Identities=21% Similarity=0.295 Sum_probs=49.0
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~ 512 (563)
..+.+|...++.+++.++.+ ..+++++|||.||++|++.|++||+++ +.+.+++.|.
T Consensus 186 ~~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 243 (266)
T PRK10976 186 AGGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLP 243 (266)
T ss_pred cCCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCC
Confidence 45678999999999988874 478999999999999999999999998 5567877663
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00023 Score=80.77 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=71.4
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
-++||++...+..|+..| ++++++++- ...-.+.+-+ +++...|+|+- .+.+|.+.++
T Consensus 722 D~vr~~a~~av~~Lk~~G---i~v~mLTGD-n~~aA~svA~-~VGi~~V~aev-----------------~P~~K~~~Ik 779 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMG---IKVVMLTGD-NDAAARSVAQ-QVGIDNVYAEV-----------------LPEQKAEKIK 779 (951)
T ss_pred cccchhHHHHHHHHHhcC---ceEEEEcCC-CHHHHHHHHH-hhCcceEEecc-----------------CchhhHHHHH
Confidence 389999999999999999 999999974 2333333322 23334455544 2457999999
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
++.++ ...+.+||||.||-++|..||+||+++..+
T Consensus 780 ~lq~~-----~~~VaMVGDGINDaPALA~AdVGIaig~gs 814 (951)
T KOG0207|consen 780 EIQKN-----GGPVAMVGDGINDAPALAQADVGIAIGAGS 814 (951)
T ss_pred HHHhc-----CCcEEEEeCCCCccHHHHhhccceeecccc
Confidence 99874 356899999999999999999999998764
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0002 Score=84.88 Aligned_cols=109 Identities=20% Similarity=0.196 Sum_probs=70.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCcc---cc--------Cc-c
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESI---ST--------GE-I 450 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~---~t--------G~-~ 450 (563)
-++|||..+.++.|++.| +.+.++|+- ...-...+.+. |+.. ..+... .+++.. .. .+ .
T Consensus 536 Dplr~~v~e~I~~l~~aG---I~v~miTGD-~~~tA~~ia~~~gi~~~~~~v~~~--~~~g~~l~~~~~~~~~~~~~~~~ 609 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAG---IRVIMITGD-NKETAEAICRRIGIFSPDEDVTFK--SFTGREFDEMGPAKQRAACRSAV 609 (917)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEecCC-CHHHHHHHHHHcCCCCCCccccce--eeeHHHHhhCCHHHHHHhhhcCe
Confidence 489999999999999999 999999975 34445554444 5521 111110 011100 00 00 0
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
..--+++.+|.+.++.+.+ . +..+.++|||.||.+|++.||+||+++...
T Consensus 610 v~ar~~P~~K~~iV~~lq~-~----g~~va~iGDG~ND~~alk~AdVGia~g~g~ 659 (917)
T TIGR01116 610 LFSRVEPSHKSELVELLQE-Q----GEIVAMTGDGVNDAPALKKADIGIAMGSGT 659 (917)
T ss_pred EEEecCHHHHHHHHHHHHh-c----CCeEEEecCCcchHHHHHhCCeeEECCCCc
Confidence 0011345688888887653 2 356778999999999999999999998543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00034 Score=64.39 Aligned_cols=101 Identities=16% Similarity=0.201 Sum_probs=66.2
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcceEEeeccEecCccccCcc
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALNVHANEFSFKESISTGEI 450 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~ 450 (563)
.+.||+.++++.|+++| +.++|+|.+ .. ..+...++. ++....++. ....+...
T Consensus 27 ~~~~g~~~~l~~Lk~~g---~~~~I~Sn~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~~~~~~ 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAG---YTVVVVTNQ-SGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF------CPHHPADN 96 (147)
T ss_pred EEcCChHHHHHHHHHCC---CEEEEEeCC-CcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE------CCCCCCCC
Confidence 57899999999999999 999999986 21 244455544 443111111 10000000
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
....--|...+...++..+. ...+++||||+..|+.+...+++ .|.+
T Consensus 97 ---~~~~KP~~~~~~~~~~~~~~-~~~e~i~IGDs~~Di~~A~~~Gi~~v~i 144 (147)
T TIGR01656 97 ---CSCRKPKPGLILEALKRLGV-DASRSLVVGDRLRDLQAARNAGLAAVLL 144 (147)
T ss_pred ---CCCCCCCHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHCCCCEEEe
Confidence 01123466788888887765 35789999999999999999998 4444
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00053 Score=64.50 Aligned_cols=86 Identities=10% Similarity=0.034 Sum_probs=56.2
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.+.||+.++++. +.|+|.+ +...+...+++ ++.. ..|++.+. .| ..--
T Consensus 86 ~~~~~~~~g~~~~L~~----------~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~~-------~~-------~~KP 140 (175)
T TIGR01493 86 YKNLPPWPDSAAALAR----------VAILSNA-SHWAFDQFAQQAGLPWYFDRAFSVDT-------VR-------AYKP 140 (175)
T ss_pred HhcCCCCCchHHHHHH----------HhhhhCC-CHHHHHHHHHHCCCHHHHhhhccHhh-------cC-------CCCC
Confidence 4467899999999982 5689988 68888888876 5531 11222210 00 1111
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 494 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~ 494 (563)
....+...++..+. .+..+++||||..|+.+.+.
T Consensus 141 ~p~~f~~~~~~~~~-~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 141 DPVVYELVFDTVGL-PPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CHHHHHHHHHHHCC-CHHHeEeEecChhhHHHHhc
Confidence 24556666666665 35789999999999988765
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0002 Score=63.33 Aligned_cols=89 Identities=21% Similarity=0.241 Sum_probs=59.7
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
.|.+...+.++.|.+. +.++|-|+- ..-++...++- |++...|++ | .....|.+.++
T Consensus 30 klf~ev~e~iqeL~d~----V~i~IASgD-r~gsl~~lae~~gi~~~rv~a-----------~------a~~e~K~~ii~ 87 (152)
T COG4087 30 KLFSEVSETIQELHDM----VDIYIASGD-RKGSLVQLAEFVGIPVERVFA-----------G------ADPEMKAKIIR 87 (152)
T ss_pred EEcHhhHHHHHHHHHh----heEEEecCC-cchHHHHHHHHcCCceeeeec-----------c------cCHHHHHHHHH
Confidence 5666777888888864 788999975 23344443321 332211111 1 12346888888
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++.++ +.++++||||.||.++|..||+||+.-
T Consensus 88 eLkk~-----~~k~vmVGnGaND~laLr~ADlGI~ti 119 (152)
T COG4087 88 ELKKR-----YEKVVMVGNGANDILALREADLGICTI 119 (152)
T ss_pred HhcCC-----CcEEEEecCCcchHHHhhhcccceEEe
Confidence 87763 578999999999999999999997663
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=9.2e-05 Score=77.84 Aligned_cols=111 Identities=15% Similarity=0.179 Sum_probs=69.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcc----ccChHhhHHHHhC--CCCcceEEeec-cEecCccccCcc-cccCCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSY----CWCGDLIRASFSS--GLNALNVHANE-FSFKESISTGEI-IEKVESP 457 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~----gws~~~I~~~L~~--~l~~~~I~aN~-l~~~~g~~tG~~-~~~~~~g 457 (563)
+.+.||+.+++..|+++| ++++|+|. |+ +.+++..|.. .. ...++.+. +.|+.-.+.... ...+..+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G---~kL~IvTNq~g~G~-~~~~~~~l~~~~~~-i~~iL~~~gl~fd~i~i~~~~~sd~~~~r 103 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAG---YKLVMVTNQDGLGT-DSFPQEDFDPPHNL-MMQIFESQGIKFDEVLICPHFPEDNCSCR 103 (354)
T ss_pred ceECcCHHHHHHHHHhCC---CeEEEEECCccccC-ccccHHHHhhHHHH-HHHHHHHcCCceeeEEEeCCcCcccCCCC
Confidence 689999999999999988 99999998 43 4566665532 00 00011110 001110011000 0122234
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
..|...+..++...+. .+.+++||||+.+|+.+.+.+++. |.+.
T Consensus 104 KP~p~~l~~a~~~l~v-~~~~svmIGDs~sDi~aAk~aGi~~I~v~ 148 (354)
T PRK05446 104 KPKTGLVEEYLAEGAI-DLANSYVIGDRETDVQLAENMGIKGIRYA 148 (354)
T ss_pred CCCHHHHHHHHHHcCC-CcccEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence 5567788887776654 357899999999999999999994 5553
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00015 Score=71.42 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=47.4
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~ 512 (563)
..+.+|...++.+++..+.+ ..+++++|||.||++|++.+|.||+++ +.+.++++|.
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~ 239 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD 239 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred eCCCCHHHHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence 34678999999999888764 478999999999999999999999998 4466776653
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00018 Score=72.57 Aligned_cols=57 Identities=21% Similarity=0.342 Sum_probs=48.9
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~ 512 (563)
..+.+|...++.+.+.++.+ ..+++++|||.||++|+..|+.||+++ +.+.+++++.
T Consensus 185 ~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~ 242 (264)
T COG0561 185 PKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD 242 (264)
T ss_pred cCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence 45678999999999988875 468999999999999999999999998 4467777765
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00011 Score=74.69 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=58.1
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeee--cCchhHHhHHh
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIP--LYPGLVKKQKE 531 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p--~~~~~~~~~~~ 531 (563)
..+.+|...++.+++.++.+ ..+++++|||.||++||+.|++||+++ +.+.+++.|... .+.+ =..|+...+++
T Consensus 184 ~~g~sKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~--~v~~~n~edGva~~l~~ 260 (272)
T PRK15126 184 PVGCNKGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHL--PVIGHCRNQAVSHYLTH 260 (272)
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCC--eecCCCcchHHHHHHHH
Confidence 34568999999999988874 478999999999999999999999998 446777666321 1222 12466666766
Q ss_pred hhcC
Q 008499 532 YTEG 535 (563)
Q Consensus 532 ~~~~ 535 (563)
+..+
T Consensus 261 ~~~~ 264 (272)
T PRK15126 261 WLDY 264 (272)
T ss_pred HhcC
Confidence 6543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0011 Score=61.92 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=59.2
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccc-cC-hHhhHHHHhC----C--CCcceEEeecc-EecCccccCcccccCCCCC
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYC-WC-GDLIRASFSS----G--LNALNVHANEF-SFKESISTGEIIEKVESPI 458 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~g-ws-~~~I~~~L~~----~--l~~~~I~aN~l-~~~~g~~tG~~~~~~~~g~ 458 (563)
+.||..++++.++++| ++++++|+- |. ....+.+|.. + ++.-.++++.- .+.+ .++++..+ ...
T Consensus 28 ~~~~~~~a~~~l~~~G---~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~--~~~e~i~~--~~~ 100 (157)
T smart00775 28 THPGVAKLYRDIQNNG---YKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA--LHREVISK--KPE 100 (157)
T ss_pred CCHHHHHHHHHHHHcC---CeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh--hhcccccC--CHH
Confidence 3588889999999999 999999984 11 1112344433 2 43335554431 1100 12222111 111
Q ss_pred -CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 459 -DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 459 -~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
=|...++++..........-+..+||..+|..+-..+++
T Consensus 101 ~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 101 VFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 277788888764431111223358999999999999987
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00025 Score=84.69 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=70.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceE---Ee----------eccEecCccccCc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNV---HA----------NEFSFKESISTGE 449 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I---~a----------N~l~~~~g~~tG~ 449 (563)
-++||+..+.++.++++| +.++++|+- ...-...+.++ |+- +... +. |.-....-+.+|.
T Consensus 567 Dplr~~v~~aI~~l~~~G---i~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~ 642 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAG---IKVIMVTGD-HPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS 642 (997)
T ss_pred CCChHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence 489999999999999999 999999986 44444444444 441 1100 00 0000000012221
Q ss_pred ---------cc---c-------cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 450 ---------II---E-------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 450 ---------~~---~-------~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
+. . --+++.+|.++++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-----g~vv~~~GDG~ND~paLk~AdVGiamg 709 (997)
T TIGR01106 643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMG 709 (997)
T ss_pred HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHhhCCcceecC
Confidence 10 0 013456899998888752 356779999999999999999999997
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00085 Score=62.88 Aligned_cols=103 Identities=21% Similarity=0.211 Sum_probs=67.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcccc--------------ChHhhHHHHhC-CCCcceEE-eeccEecCccccCc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW--------------CGDLIRASFSS-GLNALNVH-ANEFSFKESISTGE 449 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gw--------------s~~~I~~~L~~-~l~~~~I~-aN~l~~~~g~~tG~ 449 (563)
+.+-||..++++.|+++| ++++|+|..= ....+..+|.. |+....++ |-... .+.
T Consensus 28 ~~~~pgv~e~L~~L~~~g---~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~------~~~ 98 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAG---YKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFP------DDN 98 (161)
T ss_pred eeECCCHHHHHHHHHHCC---CeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCC------CCC
Confidence 578899999999999999 9999999740 12355666665 55411222 20000 001
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
....--|...+..+++..+. ...+++||||+.+|+.++..+++ ++.+.
T Consensus 99 ----~~~~KP~~~~~~~~~~~~~~-~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 99 ----CDCRKPKIKLLEPYLKKNLI-DKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred ----CCCCCCCHHHHHHHHHHcCC-CHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 11112355777777777665 34789999999999999999999 44443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00018 Score=70.59 Aligned_cols=55 Identities=20% Similarity=0.289 Sum_probs=46.2
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++..+.+ ..++++||||.||++|++.+++|++++ +.+.+++.+
T Consensus 146 ~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A 201 (225)
T TIGR01482 146 QGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWA 201 (225)
T ss_pred CCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhc
Confidence 4568999999999888764 478999999999999999999999998 445666555
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00024 Score=70.03 Aligned_cols=55 Identities=24% Similarity=0.346 Sum_probs=46.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++.++.+ ..+++++|||.||++|+..|++|++++ +.+.+++.|
T Consensus 154 ~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a 209 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAA 209 (230)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhc
Confidence 4567999999999888764 478999999999999999999999997 446677655
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00022 Score=69.78 Aligned_cols=55 Identities=18% Similarity=0.255 Sum_probs=46.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++..+.+ ..++++||||.||++|+..|++|++++ +.+.+++.|
T Consensus 144 ~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A 199 (215)
T TIGR01487 144 KGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIA 199 (215)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhC
Confidence 4668999999999887764 367999999999999999999999998 446677665
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00042 Score=81.96 Aligned_cols=108 Identities=16% Similarity=0.221 Sum_probs=71.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCcce---EE--eeccEec-CccccC-----ccc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNALN---VH--ANEFSFK-ESISTG-----EII 451 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~~~---I~--aN~l~~~-~g~~tG-----~~~ 451 (563)
.-++||+..+.++.|++.| +.+.+++|- ....-..+++ |+.... ++ ..++..- +..+.- .+-
T Consensus 545 ~Dppr~~v~~aI~~l~~AG---I~v~MiTGD--~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~Vf 619 (917)
T COG0474 545 EDPPREDVKEAIEELREAG---IKVWMITGD--HVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVF 619 (917)
T ss_pred cCCCCccHHHHHHHHHHCC---CcEEEECCC--CHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEE
Confidence 3489999999999999999 999999974 2222233333 542211 11 2222210 100000 011
Q ss_pred ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC
Q 008499 452 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 503 (563)
Q Consensus 452 ~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~ 503 (563)
.+ +++..|.++++.+.+. +..|-+.|||.||.+||+.|||||.++.
T Consensus 620 AR-vsP~qK~~IV~~lq~~-----g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 620 AR-VSPEQKARIVEALQKS-----GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred EE-cCHHHHHHHHHHHHhC-----CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 12 4678999999988874 3567799999999999999999999985
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0012 Score=62.71 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=61.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcceEEeeccEecCccccCc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALNVHANEFSFKESISTGE 449 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~ 449 (563)
+.+.||+.+++++|+++| +++.|+|.+ +. +.+...|+. ++....++.... ..+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g---~~l~I~Tn~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~------~~~~ 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAG---YRVVVATNQ-SGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPH------HPED 97 (181)
T ss_pred eEECCCHHHHHHHHHHCC---CEEEEEeCC-ccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCC------CCCC
Confidence 357899999999999998 999999975 31 223333332 321111111000 0000
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
.....--+...+...+...+. ...++++|||+.+|+.+...+++.++
T Consensus 98 ---~~~~~KP~p~~~~~~~~~l~~-~~~~~~~VgDs~~Di~~A~~aG~~~i 144 (181)
T PRK08942 98 ---GCDCRKPKPGMLLSIAERLNI-DLAGSPMVGDSLRDLQAAAAAGVTPV 144 (181)
T ss_pred ---CCcCCCCCHHHHHHHHHHcCC-ChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence 001111234566666766665 35789999999999999999998433
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00027 Score=79.05 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=48.6
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
..+.+|...++.+++.++.+ ..+++++|||.||++||+.|++||+++ +.+.+++.|
T Consensus 503 p~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~A 559 (580)
T PLN02887 503 PPGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVA 559 (580)
T ss_pred cCCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhC
Confidence 35678999999999988874 478999999999999999999999998 556777766
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00027 Score=71.47 Aligned_cols=53 Identities=21% Similarity=0.324 Sum_probs=43.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC-hhHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRR 509 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~-~~L~~ 509 (563)
.+.+|...++.+++..+.+ ..++++||||.||++|++.|++|++++.. +.+++
T Consensus 196 ~~~~K~~~l~~l~~~~gi~-~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~ 249 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWS-MKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKA 249 (272)
T ss_pred CCCChHHHHHHHHHHcCCC-HHHeEEeCCChhhHHHHHhcCceEEecCchHHHHH
Confidence 3456999999999888763 47899999999999999999999999733 44543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0014 Score=64.61 Aligned_cols=99 Identities=11% Similarity=0.082 Sum_probs=68.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc-eEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL-NVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
...+.||+.++++.++++| ++++|+|.+ +....+..++. +..++ +.+. +.|+.. .+.--+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G---~~l~I~Sn~-s~~~~~~~~~~~~~~~L~~~f~-----------~~fd~~-~g~KP~p~ 156 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLG---LRLAVYSSG-SVPAQKLLFGHSDAGNLTPYFS-----------GYFDTT-VGLKTEAQ 156 (220)
T ss_pred ccCcCcCHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHhhccccchhhhcc-----------eEEEeC-cccCCCHH
Confidence 4679999999999999999 999999998 67666666654 21111 1111 111111 11223456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
.+..+++..+.+ +.++++|||+..|+.+...||+..+
T Consensus 157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 777777777653 5789999999999999999998433
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00041 Score=70.53 Aligned_cols=58 Identities=22% Similarity=0.165 Sum_probs=46.2
Q ss_pred cccCcccccCCC---CCCcHHHHHHHHHHhCCC-CCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 445 ISTGEIIEKVES---PIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 445 ~~tG~~~~~~~~---g~~K~~~l~~~~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
..||-+.+.+.. +.+|.++++.++..+... ..-.+|.+|||.||++||..||++|+|.
T Consensus 191 ~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~ 252 (302)
T PRK12702 191 YLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLP 252 (302)
T ss_pred ccccccccccccccCCCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEec
Confidence 357766665666 889999999888765431 2347999999999999999999999995
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00031 Score=71.40 Aligned_cols=47 Identities=23% Similarity=0.273 Sum_probs=41.9
Q ss_pred CCCCCcHHHHHHHHHHhCC---CCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 455 ESPIDKVQAFNNTLEKYGT---DRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~---~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
..+.+|...++.+++.++. + ..+++++|||.||++||+.|++||+++
T Consensus 183 ~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 183 DASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred cCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 3467899999999998876 3 478999999999999999999999998
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00077 Score=74.69 Aligned_cols=87 Identities=22% Similarity=0.266 Sum_probs=66.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
-++||+..+.++.+++.| +.++++|+. ....... +++.++ ++ ....+.+|.+.++
T Consensus 346 d~lr~~~~~~i~~l~~~g---i~~~~ltGD-~~~~a~~-ia~~lg---i~-----------------~~~~p~~K~~~v~ 400 (499)
T TIGR01494 346 DPLRDDAKETISELREAG---IRVIMLTGD-NVLTAKA-IAKELG---IF-----------------ARVTPEEKAALVE 400 (499)
T ss_pred CCCchhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHH-HHHHcC---ce-----------------eccCHHHHHHHHH
Confidence 489999999999999988 899999986 3333332 222221 11 1145678999988
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++... +..+.++|||.||.+++..||+||+++
T Consensus 401 ~l~~~-----g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 401 ALQKK-----GRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HHHHC-----CCEEEEECCChhhHHHHHhCCCccccc
Confidence 88642 357899999999999999999999997
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >CHL00168 pbsA heme oxygenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.1 Score=51.95 Aligned_cols=192 Identities=17% Similarity=0.182 Sum_probs=114.8
Q ss_pred hHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---C-CHHHHHHHHHHHHH
Q 008499 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA---D-DDDAKLSISELRKG 90 (563)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a---~-~~~~~~~l~~~~~~ 90 (563)
+|+.+|-......-..+-+.+|++.+-.|.++.+.++.+|.|=|+.-.+.-.+........ + ..+...+ ...
T Consensus 4 ~ls~~Lr~~T~~~H~~aE~~~f~k~ll~g~~~~~~Y~~ll~~ly~vY~aLE~~l~~~~~~~~~~~~~~peL~R----~~a 79 (238)
T CHL00168 4 NLATQLREGTTKSHSMAENVSFVKSFLGGVIDKKSYRKLVANLYFVYSAIEEEIEKNKEHPLIKPIYFQELNR----KES 79 (238)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccchhhhh----hHH
Confidence 6888887766555555678999999999999999999999998877665555444432100 0 0111111 112
Q ss_pred HHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHH-HHHHH-H
Q 008499 91 VLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP-CMRLY-A 168 (563)
Q Consensus 91 i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~p-C~~~Y-~ 168 (563)
+..-+++ -+|=+..+..+|+|+++.|++.+..++..+. . ++.+ |+-.| .
T Consensus 80 Le~DL~~------l~G~~w~~~~~p~pa~~~Yv~rI~~~~~~~P--------------------~---~LvAH~YvrYLG 130 (238)
T CHL00168 80 LEKDLNY------YYGDDWKSIIEPSPATKIYVDRIHKISAKKP--------------------E---LLIAHAYTRYLG 130 (238)
T ss_pred HHHHHHH------HcCCCccccCCCChHHHHHHHHHHHHhhcCh--------------------H---HHHHHHHHHHHH
Confidence 2222222 2344444567889999999999999996432 2 3444 56667 2
Q ss_pred H------HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 008499 169 F------LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242 (563)
Q Consensus 169 ~------ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~ 242 (563)
. |.+.+.+..+. ++..=-.+.+++.-++-...-...++.+|++ .+++++++++.+-=..+-.+-...|.+
T Consensus 131 dlsGGQiI~k~l~r~~gl--~~~~G~~Fy~F~~i~~~~~fk~~yr~~Ld~l--~l~e~e~~~iI~EA~~AF~lN~~vf~e 206 (238)
T CHL00168 131 DLSGGQILKKIAQRAMNL--SDSGGLAFYDFDNIEDDQEFKQIYKAALDNL--PLSDDQIQNIIAEANIAFNLNMKMFQE 206 (238)
T ss_pred hccccHHHHHHHHHHhCC--CCCcCccccCCCCcCcHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22333333221 1111122223333234567777888899976 478888888777666666666665554
Q ss_pred C
Q 008499 243 Q 243 (563)
Q Consensus 243 a 243 (563)
-
T Consensus 207 L 207 (238)
T CHL00168 207 L 207 (238)
T ss_pred H
Confidence 3
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00095 Score=80.35 Aligned_cols=45 Identities=22% Similarity=0.222 Sum_probs=37.2
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++.+|.+.++.+.+. +..|-++|||.||.++|+.||+||.++..
T Consensus 785 ~sP~qK~~iV~~lq~~-----g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 785 MAPDQKETLVELLQKL-----DYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred cCHHHHHHHHHHHHhC-----CCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 4567888888887752 45678999999999999999999999843
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.018 Score=56.38 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=66.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc-
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK- 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K- 460 (563)
.+...|+..++++.++++ .+++|+|.| ........|.. |+.. ..|++.+- .| ..|
T Consensus 97 ~~~~~~~~~~~L~~l~~~----~~l~ilTNg-~~~~~~~~l~~~gl~~~Fd~v~~s~~-------~g---------~~KP 155 (229)
T COG1011 97 LLPDYPEALEALKELGKK----YKLGILTNG-ARPHQERKLRQLGLLDYFDAVFISED-------VG---------VAKP 155 (229)
T ss_pred hCccChhHHHHHHHHHhh----ccEEEEeCC-ChHHHHHHHHHcCChhhhheEEEecc-------cc---------cCCC
Confidence 378889999999998865 689999998 46677777776 6421 12222221 11 223
Q ss_pred -HHHHHHHHHHhCCCCCccEEEEcCCcCch-HHhhhcCc-cEEEcC
Q 008499 461 -VQAFNNTLEKYGTDRKNLSVYIGDSVGDL-LCLLEADI-GIVIGS 503 (563)
Q Consensus 461 -~~~l~~~~~~~~~~~~~~viyiGDs~~Dl-~~l~~Ad~-givi~~ 503 (563)
.++++..++..+.+ +..+++||||.... .....+|. +|.+..
T Consensus 156 ~~~~f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~ 200 (229)
T COG1011 156 DPEIFEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINR 200 (229)
T ss_pred CcHHHHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECC
Confidence 25666677776654 57899999987655 99999998 666653
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00053 Score=68.10 Aligned_cols=58 Identities=22% Similarity=0.233 Sum_probs=48.4
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHh
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQ 513 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~ 513 (563)
..+.+|...++.+++..+.+ ...++++|||.||++|+..+++||+++ +.+.+++.+..
T Consensus 155 ~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~ 213 (236)
T TIGR02471 155 PLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQ 213 (236)
T ss_pred eCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcC
Confidence 34678999999999888763 468999999999999999999999997 45678877654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00042 Score=63.93 Aligned_cols=92 Identities=13% Similarity=0.062 Sum_probs=59.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
.+.+|||+.+|+++++ ++ +++.|+|.+ +.++++.++.. ++.. ..|++.+ ... ..|
T Consensus 43 ~v~l~pG~~e~L~~L~-~~---~~l~I~Ts~-~~~~~~~il~~l~~~~~~f~~i~~~~-----d~~-----------~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-EL---FELVVFTAG-LRMYADPVLDLLDPKKYFGYRRLFRD-----ECV-----------FVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hc---cEEEEEeCC-cHHHHHHHHHHhCcCCCEeeeEEECc-----ccc-----------ccC
Confidence 5688999999999998 46 899999999 78888888876 4421 1122211 110 112
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
..+++. ++..+. .+.++|+||||.+|+.+...++ |.+
T Consensus 102 P~~~k~-l~~l~~-~p~~~i~i~Ds~~~~~aa~~ng--I~i 138 (148)
T smart00577 102 GKYVKD-LSLLGR-DLSNVIIIDDSPDSWPFHPENL--IPI 138 (148)
T ss_pred CeEeec-HHHcCC-ChhcEEEEECCHHHhhcCccCE--EEe
Confidence 112222 222333 3578999999999999877775 444
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00054 Score=68.96 Aligned_cols=49 Identities=29% Similarity=0.260 Sum_probs=41.7
Q ss_pred CCCCcHHHHHHHHHHhCCC-CCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+..|...++.+++.++.+ ....++++|||.||++|+..||+||++++.
T Consensus 173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 4568999999999887753 146899999999999999999999999855
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0019 Score=72.96 Aligned_cols=106 Identities=18% Similarity=0.219 Sum_probs=74.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCc-ccc-----------
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGE-IIE----------- 452 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~-~~~----------- 452 (563)
-+.||+..+-++.|++.| +.+++|++- +..--.++-++ | ++++.-++.+-.+||+ |+.
T Consensus 583 DPPR~ev~~ai~~c~~aG---IrV~mITGD-~~~TA~AI~r~iG-----i~~~~ed~~~~~~TG~efD~ls~~~~~~~~~ 653 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAG---IRVIMITGD-NKETAEAIAREIG-----IFSEDEDVSSMALTGSEFDDLSDEELDDAVR 653 (972)
T ss_pred CCCchhHHHHHHHHHHcC---CEEEEEcCC-CHHHHHHHHHHhC-----CCcCCccccccccchhhhhcCCHHHHHHHhh
Confidence 489999999999999999 999999985 34433333333 4 3444433333345552 220
Q ss_pred -----cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CCh
Q 008499 453 -----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSS 505 (563)
Q Consensus 453 -----~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~ 505 (563)
--+.+..|.++++.+.+. +.-+-.-|||+||-++|+.|||||++| ...
T Consensus 654 ~~~vFaR~~P~HK~kIVeaLq~~-----geivAMTGDGVNDApALK~AdIGIAMG~~GT 707 (972)
T KOG0202|consen 654 RVLVFARAEPQHKLKIVEALQSR-----GEVVAMTGDGVNDAPALKKADIGIAMGISGT 707 (972)
T ss_pred cceEEEecCchhHHHHHHHHHhc-----CCEEEecCCCccchhhhhhcccceeecCCcc
Confidence 024567899999988763 345557999999999999999999999 443
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.00077 Score=66.09 Aligned_cols=45 Identities=29% Similarity=0.271 Sum_probs=39.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.+.+|...++.+++..+.+ ..+++++|||.||++|+..|++||++
T Consensus 176 ~~~~Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEEe
Confidence 4556999999999888764 57899999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >cd00232 HemeO Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is essential for recycling of iron from heme | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.14 Score=49.51 Aligned_cols=186 Identities=16% Similarity=0.057 Sum_probs=110.4
Q ss_pred HHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHH
Q 008499 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECAD----DDDAKLSISELRKGV 91 (563)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~----~~~~~~~l~~~~~~i 91 (563)
|+.+|-......-...-+|||++.|..|+++.+.++.||.+-|.+....-+.+........ ..+...... .+
T Consensus 2 ~~~~Lr~~T~~~H~~~e~~~~~~~l~~~~~s~~~Y~~~L~~~~~~~~~lE~~l~~~~~~~~~~~~~~~~~~r~~----~L 77 (203)
T cd00232 2 LSEELRAATRQLHEEAENLVFMKDLLKGFLSREGYARFLANLYLVYRALEALLEASKDNPYLAPLYLPELERAA----AL 77 (203)
T ss_pred HHHHHHHHHHHHHHHHHchHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccCccccchH----HH
Confidence 5566665544433444579999999999999999999999999999988887776543211 111111111 11
Q ss_pred HHHHHHHHHHHHHhCCCccc-ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH---
Q 008499 92 LEELKMHDSFVKEWGTDLAK-MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY--- 167 (563)
Q Consensus 92 ~~E~~~h~~~~~~~gi~~~~-~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y--- 167 (563)
..- ++.+|.+... ...|.+++ .|.+++...+..+ ++.++++++.-+-.=
T Consensus 78 ~~D-------L~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------~~~~lg~~YV~egs~l~G 130 (203)
T cd00232 78 EKD-------LAYLGGSDWRVREPPLPAA-AYAARLREIAEEN-------------------PALLLGHAYVRYGADLSG 130 (203)
T ss_pred HHH-------HHHHhCCCccccCCCChHH-HHHHHHHHHHhcC-------------------HHHHHHHHHHHHHHHhcc
Confidence 111 2345555432 33456677 9999888776543 256677777665321
Q ss_pred -HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Q 008499 168 -AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEV 237 (563)
Q Consensus 168 -~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~ 237 (563)
..|.+++.+..+. + ..=..+...|+.++-...-..+.+.+|++ ..++++.+++.+-=..+-++=.
T Consensus 131 G~~i~~~l~~~~~~--~-~~~~~f~~~~g~~~~~~~w~~f~~~l~~~--~~~~~~~~~~i~~A~~~F~~~~ 196 (203)
T cd00232 131 GQVLAKIAQRALLL--E-GKGLAFYAFHGIADRGLFKREFREALDAL--PLDEEERQRVVAEARAAFRLNG 196 (203)
T ss_pred cHHHHHHHHHHhCC--C-CccCccccCCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 2233344443321 1 12234556666455666777788888886 3577777766555554444433
|
Heme is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes bacterial HO, as well as the mammalian isoforms HO-1, and HO-2. Heme oxygenases play key roles in heme homeostasis, oxidative stress response, photosynthetic pigment formation in cyanobacteria, cellular signaling in mammals, and iron acquisition from host heme by bacterial pathogens. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0043 Score=58.73 Aligned_cols=101 Identities=16% Similarity=0.190 Sum_probs=62.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh--------hHHHHhC-CCCcceEEeeccEecCccccCcccccCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL--------IRASFSS-GLNALNVHANEFSFKESISTGEIIEKVES 456 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~--------I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~ 456 (563)
+.+.||+.+++++|+++| +++.|+|.+ +... +...++. ++. .++. ....++. ....
T Consensus 27 ~~~~pgv~e~L~~Lk~~G---~~l~I~Tn~-~~~~~~~~~~~~~~~~l~~~g~~--~~~~------~~~~~~~---~~~~ 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANH---IKIFSFTNQ-PGIADGIATIADFVQELKGFGFD--DIYL------CPHKHGD---GCEC 91 (173)
T ss_pred eEECCCHHHHHHHHHHCC---CEEEEEECC-chhcCCcCCHHHHHHHHHhCCcC--EEEE------CcCCCCC---CCCC
Confidence 457899999999999999 999999975 2210 1112322 331 2110 0000010 0011
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
.--+...+...+++.+. .+.++++|||+.+|+.+...|++ +|.+.
T Consensus 92 ~KP~p~~~~~~~~~l~~-~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGL-DLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred CCCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 12245667777776665 35789999999999999999998 44443
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0041 Score=58.57 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=61.0
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChH------------hhHHHHhC-CCCcceEEeeccEecCccccCcccccC
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGD------------LIRASFSS-GLNALNVHANEFSFKESISTGEIIEKV 454 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~------------~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~ 454 (563)
+-||+.++|+.|+++| +++.|+|.+ +.. .+..+|+. |+....+++.. + +
T Consensus 43 ~~pgv~e~L~~Lk~~G---~~l~I~TN~-~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~----~----~------ 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEG---YKIVIFTNQ-SGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH----A----G------ 104 (166)
T ss_pred ecCCHHHHHHHHHHCC---CEEEEEeCC-cccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC----C----C------
Confidence 5689999999999999 999999986 231 35566665 55322222211 0 0
Q ss_pred CCCCCcHHHHHHHHHHhC--CCCCccEEEEcCCc--------CchHHhhhcCcc
Q 008499 455 ESPIDKVQAFNNTLEKYG--TDRKNLSVYIGDSV--------GDLLCLLEADIG 498 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~--~~~~~~viyiGDs~--------~Dl~~l~~Ad~g 498 (563)
...--+...+....+..+ . ...+++||||+. +|+.+...||+.
T Consensus 105 ~~~KP~p~~~~~~~~~~~~~~-~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 105 LYRKPMTGMWEYLQSQYNSPI-KMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CCCCCccHHHHHHHHHcCCCC-CchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 011123456677777665 3 347899999997 599999999864
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.00094 Score=67.08 Aligned_cols=56 Identities=21% Similarity=0.363 Sum_probs=45.9
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 511 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~ 511 (563)
..+.+|...++.+++..+.+ ..+++++|||.||++|+..|++|+++++ .+.+++.|
T Consensus 184 ~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a 240 (256)
T TIGR00099 184 AKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALA 240 (256)
T ss_pred CCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhC
Confidence 34678999999999987763 4789999999999999999999999973 34555444
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0057 Score=57.73 Aligned_cols=92 Identities=12% Similarity=0.122 Sum_probs=64.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccC-hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC-GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws-~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
...+.||+.++++.|+++| .+++|+|.+ + ...+...++. ++ ..+ .+ ..--+..
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g---~~l~I~Sn~-~~~~~~~~~~~~~gl---~~~-----------~~-------~~KP~p~ 95 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAG---RKLLIVSNN-AGEQRAKAVEKALGI---PVL-----------PH-------AVKPPGC 95 (170)
T ss_pred CCCcChhHHHHHHHHHHcC---CEEEEEeCC-chHHHHHHHHHHcCC---EEE-----------cC-------CCCCChH
Confidence 3578899999999999998 999999987 4 3555544432 32 111 01 1112445
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
.+...+++.+.. +.++++|||+. +|+.+...+++ .|.+.
T Consensus 96 ~~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 96 AFRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred HHHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 677777776653 57899999998 79999999999 55554
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0018 Score=69.45 Aligned_cols=109 Identities=19% Similarity=0.302 Sum_probs=75.7
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
.+.||.+|-|..+|+.| ++.+.+++- ..+--..++. |++ .|.. .+++.+|.+.+
T Consensus 447 ivK~Gi~ERf~elR~Mg---IkTvM~TGD--N~~TAa~IA~EAGVD------------------dfiA-eatPEdK~~~I 502 (681)
T COG2216 447 IVKPGIKERFAELRKMG---IKTVMITGD--NPLTAAAIAAEAGVD------------------DFIA-EATPEDKLALI 502 (681)
T ss_pred hcchhHHHHHHHHHhcC---CeEEEEeCC--CHHHHHHHHHHhCch------------------hhhh-cCChHHHHHHH
Confidence 67888899999999888 888888863 3344444443 332 1221 35678999999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhHHh
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKK 528 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~~~ 528 (563)
++...+ +..+-..|||.||-|+|..||+|++++....-+ +..-+.+-++++..|.
T Consensus 503 ~~eQ~~-----grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAA----kEAaNMVDLDS~PTKl 557 (681)
T COG2216 503 RQEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA----KEAANMVDLDSNPTKL 557 (681)
T ss_pred HHHHhc-----CcEEEEcCCCCCcchhhhhcchhhhhccccHHH----HHhhcccccCCCccce
Confidence 887763 345668999999999999999999998665322 2233667777644433
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0017 Score=70.14 Aligned_cols=57 Identities=23% Similarity=0.223 Sum_probs=46.8
Q ss_pred CCCCCcHHHHHHHHHHh---CCCCCccEEEEcCCcCchHHhhhcC-ccEEEc-CChhHHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKY---GTDRKNLSVYIGDSVGDLLCLLEAD-IGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~---~~~~~~~viyiGDs~~Dl~~l~~Ad-~givi~-~~~~L~~~~~ 512 (563)
..+.+|...++.+++.. +.+ ..+++++|||.||++||..++ +||+++ +.+.+++.+.
T Consensus 171 p~g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~ 232 (413)
T PLN02382 171 PQGAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYA 232 (413)
T ss_pred eCCCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHH
Confidence 34668999999999887 553 468999999999999999999 699998 4467877653
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0015 Score=64.64 Aligned_cols=47 Identities=28% Similarity=0.333 Sum_probs=39.3
Q ss_pred CCCCcHHHHHHHHHHhCCC-CCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.+.+|...++.++...+.. ....++++|||.||++|++.||+||+++
T Consensus 178 ~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 178 GGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG 225 (225)
T ss_pred CCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence 3778999999998876542 2347999999999999999999999985
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0056 Score=56.82 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=61.2
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccc--cChHhhHHHHhC------CCCcceEEeeccEecCccccCcccccCCCCC
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYC--WCGDLIRASFSS------GLNALNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~g--ws~~~I~~~L~~------~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
..++|+.++++.+.++| +.++-+|+- |-....+.+|.. +++.=.|+.+.-..- +.++.+...+ ....
T Consensus 27 ~~h~g~~~l~~~i~~~G---Y~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~-~al~rEvi~~-~p~~ 101 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNG---YKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLF-SALHREVISK-DPEE 101 (157)
T ss_pred hhhhcHHHHHHHHHHCC---eEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchh-hhhhcccccc-ChHH
Confidence 45678888888888888 888888862 113344445543 344334555531100 0111122111 0123
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
-|...|+.++.........-...+|...+|..+-..+++
T Consensus 102 fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 102 FKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 588889888875321112233469999999999999987
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.012 Score=55.79 Aligned_cols=109 Identities=7% Similarity=0.016 Sum_probs=63.4
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.+.||+.++++.|+++| +++.|+|.+=....++..|.. ++. +.. +.+.-.| +.+.++. . ....
T Consensus 41 ~~~~~l~pGv~elL~~Lk~~G---~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~-~~~~~~F-d~iv~~~---~--~~~~ 110 (174)
T TIGR01685 41 GTEVTLIKEVRDVLQTLKDAG---TYLATASWNDVPEWAYEILGTFEITYAGKT-VPMHSLF-DDRIEIY---K--PNKA 110 (174)
T ss_pred CCEEEEcccHHHHHHHHHHCC---CEEEEEeCCCChHHHHHHHHhCCcCCCCCc-ccHHHhc-eeeeecc---C--CchH
Confidence 346789999999999999999 999999965125566666665 432 000 0000001 1111111 0 0111
Q ss_pred cH--HHHHHHHHHh--CCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 460 KV--QAFNNTLEKY--GTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 460 K~--~~l~~~~~~~--~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
|. ..++.+.... +. .+.+++||||+..|+.+...+++-++..
T Consensus 111 kp~~~i~~~~~~~~~~gl-~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 111 KQLEMILQKVNKVDPSVL-KPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred HHHHHHHHHhhhcccCCC-CHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 21 1222222211 22 3578999999999999999999854443
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0047 Score=74.73 Aligned_cols=46 Identities=22% Similarity=0.401 Sum_probs=35.5
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++..|.++++-+.+.. +..+.++|||.||.+|++.|||||.+..+
T Consensus 854 ~sP~QKa~IV~~vk~~~----~~vtlaIGDGaNDv~mIq~AdVGIGIsG~ 899 (1178)
T PLN03190 854 VAPLQKAGIVALVKNRT----SDMTLAIGDGANDVSMIQMADVGVGISGQ 899 (1178)
T ss_pred CCHHHHHHHHHHHHhcC----CcEEEEECCCcchHHHHHhcCeeeeecCc
Confidence 35568888777665431 24678999999999999999999987544
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0051 Score=74.22 Aligned_cols=46 Identities=26% Similarity=0.375 Sum_probs=36.5
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++.+|.+.++.+.+.. +..+.++|||.||.+||+.|||||.+..+
T Consensus 751 ~sP~qK~~IV~~lk~~~----~~~vl~iGDG~ND~~mlk~AdVGIgi~g~ 796 (1057)
T TIGR01652 751 VSPSQKADVVRLVKKST----GKTTLAIGDGANDVSMIQEADVGVGISGK 796 (1057)
T ss_pred CCHHHHHHHHHHHHhcC----CCeEEEEeCCCccHHHHhhcCeeeEecCh
Confidence 44578888888776531 35688999999999999999999988544
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0025 Score=64.83 Aligned_cols=51 Identities=29% Similarity=0.306 Sum_probs=42.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCC-ccEEEEcCCcCchHHhhhcCccEEEcC-ChhHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRK-NLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLR 508 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~-~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~ 508 (563)
.+ +|...++.+.+..+.+ . ..+++||||.||++|+..|++|+++++ .+.++
T Consensus 188 ~~-~Kg~al~~l~~~~~i~-~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQ-DGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CC-CHHHHHHHHHHHHhcc-CCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 45 7999999999887763 6 789999999999999999999999984 34444
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0051 Score=61.62 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=45.9
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh-cCccEEEc-CChhHHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE-ADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~-Ad~givi~-~~~~L~~~~~ 512 (563)
.+.+|...++.+++.++.+ ..+++++|||.||++|+.. ++.+|+++ +.+.+++.+.
T Consensus 164 ~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 164 QGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYD 221 (249)
T ss_pred CCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHH
Confidence 4668999999999887763 5789999999999999998 66799997 4456776654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.005 Score=56.42 Aligned_cols=89 Identities=19% Similarity=0.362 Sum_probs=62.9
Q ss_pred HHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCC
Q 008499 397 QKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDR 475 (563)
Q Consensus 397 ~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~ 475 (563)
+.+.+.| +.+.|+|+- .+..++...+. |+.. .+.| ..+|..++++++.+.+.+
T Consensus 45 k~l~~~G---i~vAIITGr-~s~ive~Ra~~LGI~~-------------~~qG--------~~dK~~a~~~L~~~~~l~- 98 (170)
T COG1778 45 KLLLKSG---IKVAIITGR-DSPIVEKRAKDLGIKH-------------LYQG--------ISDKLAAFEELLKKLNLD- 98 (170)
T ss_pred HHHHHcC---CeEEEEeCC-CCHHHHHHHHHcCCce-------------eeec--------hHhHHHHHHHHHHHhCCC-
Confidence 3445557 999999986 34455554443 4421 1222 247999999999998874
Q ss_pred CccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 476 KNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 476 ~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
+.++.||||-.+|++++..++++++.. +.+-++..|
T Consensus 99 ~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a 135 (170)
T COG1778 99 PEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRA 135 (170)
T ss_pred HHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhh
Confidence 589999999999999999999887776 334444333
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.02 Score=55.01 Aligned_cols=117 Identities=15% Similarity=0.230 Sum_probs=62.0
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.+++.-||+.|.++.|.+.| ...++|++.- ... ...+-..|.+-
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g---~~~~~Itar~-~~~--------------------------------~~~~~~~k~~W 113 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKG---HEIVIITARP-PEF--------------------------------PDHSAEEKREW 113 (191)
T ss_dssp TT--B-TTHHHHHHHHHTST---TEEEEEEE-S-SSS--------------------------------GCCCHHHHHHH
T ss_pred cCCCccHHHHHHHHHHHHcC---CcEEEEEecC-ccc--------------------------------cchHHHHHHHH
Confidence 35778899999999999887 6777777631 100 00011134454
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhHHhHHhhhcCCCCccccc
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEK 543 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~~~~~ 543 (563)
|++..... ...++++.||- . +..+| +.|-+++.-.+-+...|++.+=|..- |.+.
T Consensus 114 l~~hf~~i---~~~~~~~~~~K----~-~v~~D--vlIDD~~~n~~~~~~~g~~~iLfd~p---------------~Nr~ 168 (191)
T PF06941_consen 114 LERHFPFI---PYDNLIFTGDK----T-LVGGD--VLIDDRPHNLEQFANAGIPVILFDQP---------------YNRD 168 (191)
T ss_dssp HHHHHTHH---HHCCEEEESSG----G-GC--S--EEEESSSHHHSS-SSESSEEEEE--G---------------GGTT
T ss_pred HHHHcCCC---chheEEEecCC----C-eEecc--EEecCChHHHHhccCCCceEEEEcCC---------------CCCC
Confidence 55543211 12345665542 2 33466 67766665555566677776655421 2222
Q ss_pred cCeEEEeCCHHHHHHhHh
Q 008499 544 SGILYTVSSWAEVHAFIL 561 (563)
Q Consensus 544 ~~~ly~~~~W~~i~~~~~ 561 (563)
-...++|.||.||.++|+
T Consensus 169 ~~~~~Rv~~W~ei~~~i~ 186 (191)
T PF06941_consen 169 ESNFPRVNNWEEIEDLIL 186 (191)
T ss_dssp --TSEEE-STTSHHHHHH
T ss_pred CCCCccCCCHHHHHHHHH
Confidence 226899999999988774
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0076 Score=54.10 Aligned_cols=92 Identities=12% Similarity=0.023 Sum_probs=61.8
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceE--EeeccEecCccccCcccccCCCCCCcHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNV--HANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I--~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.+.||+.++++.++++| +++.|+|.++...++...++. + ....+ +..-+ +...+|. ...|.+.
T Consensus 29 ~~~~gv~e~L~~Lk~~g---~~l~i~Sn~~~~~~~~~~l~~~~-~~~~i~~l~~~f---~~~~~~~-------~~pkp~~ 94 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNG---FLLALASYNDDPHVAYELLKIFE-DFGIIFPLAEYF---DPLTIGY-------WLPKSPR 94 (128)
T ss_pred HHHHHHHHHHHHHHHCC---eEEEEEeCCCCHHHHHHHHHhcc-ccccchhhHhhh---hhhhhcC-------CCcHHHH
Confidence 68899999999999999 999999998667777777664 3 00000 11111 1111111 1136777
Q ss_pred HHHHHHHhC--CCCCccEEEEcCCcCchHHhh
Q 008499 464 FNNTLEKYG--TDRKNLSVYIGDSVGDLLCLL 493 (563)
Q Consensus 464 l~~~~~~~~--~~~~~~viyiGDs~~Dl~~l~ 493 (563)
+...++..+ . .+.+++||||+..|+....
T Consensus 95 ~~~a~~~lg~~~-~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 95 LVEIALKLNGVL-KPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred HHHHHHHhcCCC-CcceEEEECCCHhHHHHHH
Confidence 777777777 5 3588999999999987654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.012 Score=60.63 Aligned_cols=105 Identities=4% Similarity=-0.151 Sum_probs=65.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
..+.||+.++++.++++| ++++|+|+. +....+..++. ++.+ ..|++-. .+..+......+..+.
T Consensus 186 ~~~~~~~~~~l~~l~~~g---~~i~i~T~r-~~~~~~~~l~~l~~~~~~f~~i~~~~-------~~~~~~~~~~~~kp~p 254 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAG---YEIIVVSGR-DGVCEEDTVEWLRQTDIWFDDLIGRP-------PDMHFQREQGDKRPDD 254 (300)
T ss_pred CCCChhHHHHHHHHHhCC---CEEEEEeCC-ChhhHHHHHHHHHHcCCchhhhhCCc-------chhhhcccCCCCCCcH
Confidence 467899999999999998 999999998 57777777765 3321 1111111 0001111111112223
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
..+...+.+.+...+..++||||+.+|+.+...+++.++-
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~ 294 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQ 294 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEE
Confidence 3444444443332347899999999999999999985443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0074 Score=60.60 Aligned_cols=48 Identities=29% Similarity=0.416 Sum_probs=38.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+.+|..+++-++..++.+ ..+++++|||-||++||..+..||++++.
T Consensus 162 ~~a~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL~~~~~~vvV~Na 209 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIP-PEQVLVAGDSGNDLEMLEGGDHGVVVGNA 209 (247)
T ss_dssp TT-SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHHCCSSEEEE-TTS
T ss_pred CCCCHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHHcCcCCEEEEcCC
Confidence 4556999999999988764 47899999999999999888889999844
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.005 Score=59.46 Aligned_cols=45 Identities=20% Similarity=0.270 Sum_probs=39.1
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.+.+|...++.+++..+.+ ...++++|||.||+.|+..++++|++
T Consensus 160 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5678999999999887653 46899999999999999999998875
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.0082 Score=67.66 Aligned_cols=48 Identities=23% Similarity=0.137 Sum_probs=40.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEE--cCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYI--GDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyi--GDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+.+|..+++.+++.++... ..++.+ |||.||++||..||+||+++..
T Consensus 610 ~gvdKG~AL~~L~e~~gI~~-~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLNF-GNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCCHHHHHHHHHHHhCCCc-cceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 47799999999998877542 456666 9999999999999999999744
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.28 Score=48.69 Aligned_cols=100 Identities=24% Similarity=0.341 Sum_probs=64.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH--
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV-- 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~-- 461 (563)
...+-+|+.++++++|+.| ..+.|+|- + ++-.+..+.. ++. ..||--+.. ..-|..|.
T Consensus 111 ~~~~~~~~~~~lq~lR~~g---~~l~iisN-~-d~r~~~~l~~~~l~--------~~fD~vv~S------~e~g~~KPDp 171 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKG---TILGIISN-F-DDRLRLLLLPLGLS--------AYFDFVVES------CEVGLEKPDP 171 (237)
T ss_pred CceeccHHHHHHHHHHhCC---eEEEEecC-C-cHHHHHHhhccCHH--------Hhhhhhhhh------hhhccCCCCh
Confidence 4567788899999999998 88888884 3 5556655544 431 111111111 12233342
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCc-cEEEcCC
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGSS 504 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-givi~~~ 504 (563)
++++-.++..+. .+..+++|||+ .||+..++.+|. ++.+.++
T Consensus 172 ~If~~al~~l~v-~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 172 RIFQLALERLGV-KPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred HHHHHHHHHhCC-ChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 455555555554 36889999997 588999999998 7777644
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.1 Score=52.58 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=72.7
Q ss_pred HHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC----CCCcceE-EeeccE-----ecCccccC
Q 008499 379 IKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS----GLNALNV-HANEFS-----FKESISTG 448 (563)
Q Consensus 379 i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~----~l~~~~I-~aN~l~-----~~~g~~tG 448 (563)
+.+......+.+.+.++++.++++| ++++.+|..+ ..+....++. |++...- +.++-. +.+.....
T Consensus 73 i~~~~~~~lie~~~~~~i~~lq~~~---~~v~alT~~~-~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~ 148 (252)
T PF11019_consen 73 IFELRKMELIESDVPNIINSLQNKG---IPVIALTARG-PNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRA 148 (252)
T ss_pred HHhhcceEEcchhHHHHHHHHHHCC---CcEEEEcCCC-hhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCC
Confidence 3445556678889999999999999 9999999984 6677776665 4421111 111111 11110000
Q ss_pred cc-c-cc-CCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 449 EI-I-EK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 449 ~~-~-~~-~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
.+ . |- .++|.+|...|..++...+. .+.++|||-|+.-.+..+..|
T Consensus 149 ~~~~~GIlft~~~~KG~~L~~fL~~~~~-~pk~IIfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 149 PSFYDGILFTGGQDKGEVLKYFLDKINQ-SPKKIIFIDDNKENLKSVEKA 197 (252)
T ss_pred ceeecCeEEeCCCccHHHHHHHHHHcCC-CCCeEEEEeCCHHHHHHHHHH
Confidence 00 0 11 35678999999999988765 467899999999888766653
|
The function is not known. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.0086 Score=60.80 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=41.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc----CccEEEcCCh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA----DIGIVIGSSS 505 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A----d~givi~~~~ 505 (563)
.+.+|...++++++..+.. ...++|+||+.||+.|+..+ ++||.++...
T Consensus 171 ~g~~Kg~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~ 223 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA 223 (266)
T ss_pred CCCCHHHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC
Confidence 4678999999999987653 46799999999999999999 8899998553
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.047 Score=62.07 Aligned_cols=126 Identities=19% Similarity=0.210 Sum_probs=74.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CC--CcceEEeec-cEecC---c---cccCccc-cc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GL--NALNVHANE-FSFKE---S---ISTGEII-EK 453 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l--~~~~I~aN~-l~~~~---g---~~tG~~~-~~ 453 (563)
+-+.|||..+-++.|+..| +.+-.|++. +-.--+++-.+ |+ ++....|-+ -+|.+ . ..-+++. --
T Consensus 645 kDPvRPgV~~AV~~Cq~AG---ItVRMVTGD-NI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlA 720 (1034)
T KOG0204|consen 645 KDPVRPGVPEAVQLCQRAG---ITVRMVTGD-NINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLA 720 (1034)
T ss_pred cCCCCCCcHHHHHHHHHcC---cEEEEEeCC-cHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeee
Confidence 3489999999999999999 999999974 21111222222 43 111111110 01110 0 0011111 01
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecCc
Q 008499 454 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 454 ~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~~ 523 (563)
-.++.||.-.++.+++. +.-+-.-|||.||-|+|+.||||..+| +.... |++. -.++=+++
T Consensus 721 RSSP~DK~lLVk~L~~~-----g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV---AKEa-SDIIi~DD 782 (1034)
T KOG0204|consen 721 RSSPNDKHLLVKGLIKQ-----GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV---AKEA-SDIIILDD 782 (1034)
T ss_pred cCCCchHHHHHHHHHhc-----CcEEEEecCCCCCchhhhhcccchhccccchhh---hhhh-CCeEEEcC
Confidence 24578999888888852 233446799999999999999999998 44332 2333 35665554
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.021 Score=57.29 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=41.7
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcC----CcCchHHhhhcCc-cEEEc-CChhHHHHHHh
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIG-SSSSLRRVGSQ 513 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-givi~-~~~~L~~~~~~ 513 (563)
..+.+|...++.+.+. ...++++|| |.||++||+.|.. |+.++ +.+.++.+|+-
T Consensus 184 ~~gvsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~ 243 (247)
T PTZ00174 184 PKGWDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKEL 243 (247)
T ss_pred eCCCcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHH
Confidence 3467899999999875 368999999 8999999997643 66665 45667766654
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.13 Score=49.04 Aligned_cols=109 Identities=18% Similarity=0.259 Sum_probs=65.0
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcc--cc-ChHhhHHHHhCCCCcceEEeeccEecCccccCccc------ccCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSY--CW-CGDLIRASFSSGLNALNVHANEFSFKESISTGEII------EKVES 456 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~--gw-s~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~------~~~~~ 456 (563)
+.+.||..+.+..+++.| +.++|||. |. .+.|....+.. +.+ .+=+.|.-.+....+-+. ..+.+
T Consensus 30 ~~~~~g~i~al~~l~~~g---y~lVvvTNQsGi~rgyf~~~~f~~-~~~--~m~~~l~~~gv~id~i~~Cph~p~~~c~c 103 (181)
T COG0241 30 FQFIPGVIPALLKLQRAG---YKLVVVTNQSGIGRGYFTEADFDK-LHN--KMLKILASQGVKIDGILYCPHHPEDNCDC 103 (181)
T ss_pred hccCccHHHHHHHHHhCC---CeEEEEECCCCccccCccHHHHHH-HHH--HHHHHHHHcCCccceEEECCCCCCCCCcc
Confidence 578899999999999888 99999996 10 12222222221 000 000000000111111111 11334
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
.--|.-.+.+++++++.+ ..+.++|||..+|+.+...+++ |+.+
T Consensus 104 RKP~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~ 148 (181)
T COG0241 104 RKPKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLV 148 (181)
T ss_pred cCCChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEE
Confidence 445667888888888764 4789999999999999999998 4444
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.13 Score=51.19 Aligned_cols=87 Identities=16% Similarity=0.246 Sum_probs=54.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhH--HHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR--ASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~--~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
...+-||+.+++++++++| .++.|+|.+ +..... ..|++ |++. ..|+++..
T Consensus 22 ~~~~~pga~e~L~~L~~~G---~~~~ivTN~-~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~------------------- 78 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQG---KPVYFVSNS-PRNIFSLHKTLKSLGINADLPEMIISSGE------------------- 78 (242)
T ss_pred CCccCccHHHHHHHHHHCC---CEEEEEeCC-CCChHHHHHHHHHCCCCccccceEEccHH-------------------
Confidence 3567899999999999999 999999987 555544 45554 5532 12222210
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
.-...+....++.+. .+..++++||+..|+..+..+
T Consensus 79 ~~~~~l~~~~~~~~~-~~~~~~~vGd~~~d~~~~~~~ 114 (242)
T TIGR01459 79 IAVQMILESKKRFDI-RNGIIYLLGHLENDIINLMQC 114 (242)
T ss_pred HHHHHHHhhhhhccC-CCceEEEeCCcccchhhhcCC
Confidence 011244444433332 235799999999998777443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.05 Score=60.51 Aligned_cols=112 Identities=13% Similarity=0.175 Sum_probs=66.0
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
+.=|.++..-+..++.++ ....|+++. |-++.....+..+ +++.|- .+ .+.+.-|++..|.++.+
T Consensus 710 v~sr~dah~eL~~lR~k~---~~aLvi~G~-Sl~~cl~yye~Ef--~el~~~--------~~-aVv~CRctPtQKA~v~~ 774 (1051)
T KOG0210|consen 710 VTSRGDAHNELNNLRRKT---DCALVIDGE-SLEFCLKYYEDEF--IELVCE--------LP-AVVCCRCTPTQKAQVVR 774 (1051)
T ss_pred cCCchHHHHHHHHhhcCC---CcEEEEcCc-hHHHHHHHHHHHH--HHHHHh--------cC-cEEEEecChhHHHHHHH
Confidence 455666777777777665 566677764 3333222222110 110000 00 11122367889999888
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC-hhHHHHHHhhCC
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGSQFGV 516 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~-~~L~~~~~~~gi 516 (563)
-+.+.. +.++-+||||-||..|+..||+||.|-++ .+=+..+..+.|
T Consensus 775 llq~~t----~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI 822 (1051)
T KOG0210|consen 775 LLQKKT----GKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSI 822 (1051)
T ss_pred HHHHhh----CceEEEEcCCCccchheeecccceeeecccccccchhccccH
Confidence 777653 35788999999999999999998888544 223333344544
|
|
| >PF12981 DUF3865: Domain of Unknown Function with PDB structure (DUF3865); InterPro: IPR024477 This entry represents a family of proteins of unknown function | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.24 Score=47.72 Aligned_cols=202 Identities=15% Similarity=0.121 Sum_probs=106.8
Q ss_pred HHHHHHHHhHHhHH-Hh-hcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 008499 16 LARRLWIKFKRESV-FA-MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93 (563)
Q Consensus 16 ~~~~lw~~~~~~~~-~~-~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~ 93 (563)
|+..+.+....+.. ++ .++||++.|..-++.. ...||.|=-.|-++-.-.+..|+.++...-.=-+..++..++.+
T Consensus 4 ~s~~~~~~l~~d~~~fs~nn~~~~~~i~t~S~~~--~~~vi~~ys~F~~~~~~~l~~A~~~~~~~~~~~V~~El~~Ni~E 81 (231)
T PF12981_consen 4 FSTQLNQWLTMDHYQFSINNNPFLSHISTASFSQ--KELVIKQYSVFPKYNCGMLQRAAYCIRGFCWPGVAQELQRNINE 81 (231)
T ss_dssp HHHHHHHHHHHH-GGG-TTT-CCHHGCCC--HHH--HHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhhhhhcCCHHHHHhhhhhHHH--HHHHHHHHhHhhHHHHHHHHHHHHHHhhcCCcHHHHHHHHhHHH
Confidence 44555444433333 33 5899999887665554 44444443336665555555565555332212245567778888
Q ss_pred HHH----------HHHHHHHH-hCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHH
Q 008499 94 ELK----------MHDSFVKE-WGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP 162 (563)
Q Consensus 94 E~~----------~h~~~~~~-~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~p 162 (563)
|.. +++.-+.. +|.+.. ...|+++|.+..+=+.+...-+. -++++|++.
T Consensus 82 E~G~~~gk~sHy~~~~~~l~~~~~~~v~-~~~Ps~aT~~fl~sv~~L~t~~~-------------------s~vlGa~YA 141 (231)
T PF12981_consen 82 EMGEGCGKISHYVVFRKALHTYFGFDVN-NRMPSVATTHFLDSVLALFTWDS-------------------SEVLGACYA 141 (231)
T ss_dssp HTTTTTTT--HHHHHHHHHHHHHS---T-T----HHHHHHHHHHHHHCTS-H-------------------HHHHHHHHH
T ss_pred hcCCCCCCcchHHHHHHHHHHHhCCccc-ccCCcHHHHHHHHHHHHHhCCCH-------------------HHHHHHHHH
Confidence 876 56665554 887665 46799999999888888764322 255666665
Q ss_pred HH-------HHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Q 008499 163 CM-------RLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 235 (563)
Q Consensus 163 C~-------~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~l 235 (563)
-+ -+-.+|..+++...+..-+...- ++.+.+-++-=.+..+.+.+.++.... +++++...++=|..++..
T Consensus 142 tE~~AIpEl~ll~ei~~~la~rk~~~~~~s~l-~F~d~HlDg~E~~H~d~L~~~l~~~i~--~e~q~~~f~~Gf~~mI~~ 218 (231)
T PF12981_consen 142 TEAAAIPELQLLYEIVNELAQRKGLHNSWSQL-DFYDWHLDGTEQEHKDGLRQFLASYID--TEEQMPLFKDGFLAMIDI 218 (231)
T ss_dssp HHHHHHHHHHHHHHHHTTT---HHHHH-------HHHHHCS----HHHHHHHHHHHTT----GGG-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCcchhhh-HHHHHhcchHHHHHHHHHHHHHHHHcC--cchhHHHHHHHHHHHHHH
Confidence 44 23334443333211000011111 344444455556788889999998753 344688899999999999
Q ss_pred HHHhhcc
Q 008499 236 EVEFFCA 242 (563)
Q Consensus 236 E~~Fw~~ 242 (563)
=..||.+
T Consensus 219 m~~wW~~ 225 (231)
T PF12981_consen 219 MEDWWKE 225 (231)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8899975
|
The Nostoc punctiforme protein (D0VWS1 from SWISSPROT) has been structurally characterised and adopts a heme oxygenase-like fold similar to that of the Chlamydia trachomatis death domain-binding CADD protein. The proposed active sites of the Nostoc and Chlamydia sequences are identical, suggesting similar functions.; PDB: 3B5P_A 3B5O_A. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.17 Score=52.69 Aligned_cols=106 Identities=11% Similarity=0.008 Sum_probs=71.7
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
+.||+.++++.++++| +.+.|+|.+ ....+..+|++ +.-+. ...+.. . ......|...++
T Consensus 32 ~~~~~~e~L~~L~~~G---i~lai~S~n-~~~~a~~~l~~~~~~~~~---~~~f~~---~--------~~~~~pk~~~i~ 93 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQG---FLLALASKN-DEDDAKKVFERRKDFILQ---AEDFDA---R--------SINWGPKSESLR 93 (320)
T ss_pred cHHHHHHHHHHHHhCC---CEEEEEcCC-CHHHHHHHHHhCccccCc---HHHeeE---E--------EEecCchHHHHH
Confidence 3789999999999999 999999999 57788888875 11000 000100 0 001125888899
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHHH
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGS 512 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~~ 512 (563)
+++++.+.+ .+.++||||+..|+.....+...+-+.. ...+.+...
T Consensus 94 ~~~~~l~i~-~~~~vfidD~~~d~~~~~~~lp~~~~~~~~~~~~~~l~ 140 (320)
T TIGR01686 94 KIAKKLNLG-TDSFLFIDDNPAERANVKITLPVKTLLCDPAELAAILL 140 (320)
T ss_pred HHHHHhCCC-cCcEEEECCCHHHHHHHHHHCCCCccCCChHHHHHHhc
Confidence 998888764 5789999999999999998765443332 234444443
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF01126 Heme_oxygenase: Heme oxygenase; InterPro: IPR016053 Haem oxygenase (1 | Back alignment and domain information |
|---|
Probab=94.59 E-value=2.4 Score=40.94 Aligned_cols=107 Identities=18% Similarity=0.176 Sum_probs=68.5
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCHHHHHHHHHHH
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-----DDDDAKLSISELR 88 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a-----~~~~~~~~l~~~~ 88 (563)
|+|+++|-......-...-+++|++.+.+|.++.+.+..+|.+=|.+....-..+....+.. ..+ ......
T Consensus 1 ~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~~~~~~~~Y~~~L~~~~~~y~~lE~~l~~~~~~~~~~~~~~~-~l~R~~--- 76 (205)
T PF01126_consen 1 MSLSQRLREATRDLHERLEKSPFMKDLFAGDLSRDDYARFLQAFYHVYRALEAALDRNRDDPALAPLYFP-ELRRSA--- 76 (205)
T ss_dssp -SHHHHHHHHTHHHHHHHHTSHHHHHHHTTSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTTGGGS-G-HHHTHH---
T ss_pred CcHHHHHHHHHHHHHHHHHcchhHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccccCc-chhHHH---
Confidence 57888888776555555568999999999999999999999999988887776665542221 111 111111
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc
Q 008499 89 KGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS 131 (563)
Q Consensus 89 ~~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~ 131 (563)
.+..-+.. -.|-+..+..++.|++..|..++...+.
T Consensus 77 -~L~~DL~~------l~~~~~~~~~~~~~a~~~~~~~i~~~~~ 112 (205)
T PF01126_consen 77 -ALEADLAA------LGGPDWRDDIEPSPATQAYVPHIRELAE 112 (205)
T ss_dssp -HHHHHHHH------HHCTTHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHH------hhCCCcccccCCChhHHHHHHHHHHHHc
Confidence 11111211 1121222335678999999999988874
|
14.99.3 from EC) (HO) [] is the microsomal enzyme that, in animals, carries out the oxidation of haem, it cleaves the haem ring at the alpha-methene bridge to form biliverdin and carbon monoxide []. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. In mammals there are three isozymes of haem oxygenase: HO-1 to HO-3. The first two isozymes differ in their tissue expression and their inducibility: HO-1 is highly inducible by its substrate haem and by various non-haem substances, while HO-2 is non-inducible. It has been suggested [] that HO-2 could be implicated in the production of carbon monoxide in the brain where it is said to act as a neurotransmitter. In the genome of the chloroplast of red algae as well as in cyanobacteria, there is a haem oxygenase (gene pbsA) that is the key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae []. A haem oxygenase is also present in the bacteria Corynebacterium diphtheriae (gene hmuO), where it is involved in the acquisition of iron from the host haem []. There is, in the central section of these enzymes, a well-conserved region centred on a histidine residue.; GO: 0004392 heme oxygenase (decyclizing) activity, 0006788 heme oxidation, 0055114 oxidation-reduction process; PDB: 1J77_A 1P3U_A 1P3V_A 1P3T_A 1WNW_B 1WNX_B 1IW1_B 1WNV_C 1V8X_A 1WZG_B .... |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.29 Score=54.41 Aligned_cols=115 Identities=12% Similarity=0.084 Sum_probs=70.2
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccCh------------HhhHHHHhC-CCCcceEEeeccEecCccccCcccccC
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCG------------DLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKV 454 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~ 454 (563)
+.||+.+.|+.|+++| +.++|+|.- +. ..+..+|+. |++..-++|-. + .
T Consensus 198 l~pgV~e~L~~L~~~G---y~IvIvTNQ-~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~----~----------~ 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADG---FKICIFTNQ-GGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIG----A----------G 259 (526)
T ss_pred cccCHHHHHHHHHHCC---CEEEEEECC-cccccCcccHHHHHHHHHHHHHHcCCceEEEEeCC----C----------C
Confidence 5689999999999999 999999973 22 235666665 55422222221 0 0
Q ss_pred CCCCCcHHHHHHHHHHhC----CCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHHHhhCCeeeecCc
Q 008499 455 ESPIDKVQAFNNTLEKYG----TDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~----~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~~~~gi~~~p~~~ 523 (563)
.+.--+...+..++..++ . ...+++||||+.+|+.+...|+. --.+ +.+=+.+|..-||+|..-++
T Consensus 260 ~~RKP~pGm~~~a~~~~~~~~~I-d~~~S~~VGDaagr~~~g~~ag~--~~~D~s~~D~~FA~n~gi~F~tPee 330 (526)
T TIGR01663 260 FYRKPLTGMWDHLKEEANDGTEI-QEDDCFFVGDAAGRPANGKAAGK--KKKDFSCADRLFAANLGIPFATPEE 330 (526)
T ss_pred CCCCCCHHHHHHHHHhcCcccCC-CHHHeEEeCCcccchHHHHhcCC--CcCCCChhhHHHHHHcCCcccChHH
Confidence 111123345566665543 2 24689999999999988776652 0001 12335577788888875443
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.067 Score=53.60 Aligned_cols=53 Identities=15% Similarity=0.093 Sum_probs=43.0
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcC----CcCchHHhhhcCc-cEEEcCChhHHHHHHh
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSSSSLRRVGSQ 513 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-givi~~~~~L~~~~~~ 513 (563)
..|.+|...|+.++ ..+.++++|| +.||++||+..++ |+.+.+..-+...|.+
T Consensus 185 ~~gvnKg~al~~L~------~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~~~~ 242 (245)
T PLN02423 185 PQGWDKTYCLQFLE------DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQCTA 242 (245)
T ss_pred eCCCCHHHHHHHhc------CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHHHHH
Confidence 45778999999998 1478999999 8999999998666 8888766666767654
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.24 Score=48.77 Aligned_cols=113 Identities=15% Similarity=0.177 Sum_probs=68.3
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh-hHHHHh---C-CCCcceEEeeccEecCccccCcccccCCCCCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL-IRASFS---S-GLNALNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~-I~~~L~---~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
....-||+.||++...++| ..++-||.- ..+- ....+. + |++.+. =-.+.+ . .....
T Consensus 120 ~sk~vpGA~eFl~Yvn~~G---g~ifyiSNR-~~~~~~~~T~~nLk~~g~~~~~--~~~~ll----------k--k~~k~ 181 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNG---GKIFYISNR-DQENEKDGTIENLKSEGLPQVL--ESHLLL----------K--KDKKS 181 (274)
T ss_pred ccccCccHHHHHHHHHhcC---cEEEEEecc-chhcccchhHHHHHHcCccccc--ccceEE----------e--eCCCc
Confidence 3466799999999999999 899999963 2322 222222 1 443210 000111 1 12234
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecC
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~ 522 (563)
|..+.+...+. ...|.+|||...|+.-....+-- --...-+.+..+.||-.|+-+.
T Consensus 182 Ke~R~~~v~k~-----~~iVm~vGDNl~DF~d~~~k~~~--~eR~Alv~~~~~~FGk~~Ii~p 237 (274)
T COG2503 182 KEVRRQAVEKD-----YKIVMLVGDNLDDFGDNAYKKAE--AERRALVKQNQKKFGKKFIILP 237 (274)
T ss_pred HHHHHHHHhhc-----cceeeEecCchhhhcchhhhhhh--HHHHHHHHHHHHHhCceEEEec
Confidence 66676666553 34677999999999766665511 0012357888899998888665
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.08 E-value=1.8 Score=42.63 Aligned_cols=105 Identities=11% Similarity=0.080 Sum_probs=63.8
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-C-C-Cc-ceEEe-eccEecCccccCcccccCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-G-L-NA-LNVHA-NEFSFKESISTGEIIEKVESP 457 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~-l-~~-~~I~a-N~l~~~~g~~tG~~~~~~~~g 457 (563)
.....+-||+.++++.|+.+| +|+.++|.. +..-++..++. + + .. -++++ ..-++. .|
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~g---ip~alat~s-~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~-------------~g 150 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNG---IPVALATSS-TSASFELKISRHEDIFKNFSHVVLGDDPEVK-------------NG 150 (222)
T ss_pred ccccccCCcHHHHHHHHHhCC---CCeeEEecC-CcccHHHHHHHhhHHHHhcCCCeecCCcccc-------------CC
Confidence 346789999999999999999 999999986 34444444443 1 1 10 01111 111111 11
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
-.....+-.-.+..+....++++.+.||.+=+.+.+.|+--+++-++
T Consensus 151 KP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 151 KPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 11212222222333332237899999999999999999986666545
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.25 Score=49.01 Aligned_cols=89 Identities=12% Similarity=0.118 Sum_probs=51.4
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHh---C-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS---S-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~---~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
+.-||+.+|++.++++| +.|++||+= ........++ . |+... +.+.+... +.. .+.....-|..
T Consensus 115 ~aip~a~~l~~~~~~~G---~~V~~iT~R-~~~~r~~T~~nL~~~G~~~~----~~l~lr~~---~~~-~~~~~~~yK~~ 182 (229)
T PF03767_consen 115 PAIPGALELYNYARSRG---VKVFFITGR-PESQREATEKNLKKAGFPGW----DHLILRPD---KDP-SKKSAVEYKSE 182 (229)
T ss_dssp EEETTHHHHHHHHHHTT---EEEEEEEEE-ETTCHHHHHHHHHHHTTSTB----SCGEEEEE---SST-SS------SHH
T ss_pred cccHHHHHHHHHHHHCC---CeEEEEecC-CchhHHHHHHHHHHcCCCcc----chhccccc---ccc-ccccccccchH
Confidence 66788999999999999 999999984 2333333332 2 54321 11211110 000 01112334888
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHH
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLC 491 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~ 491 (563)
..+.+.++ .+..+.+|||..+|+.-
T Consensus 183 ~r~~i~~~----Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 183 RRKEIEKK----GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp HHHHHHHT----TEEEEEEEESSGGGCHC
T ss_pred HHHHHHHc----CCcEEEEeCCCHHHhhc
Confidence 87877763 12345589999999987
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.91 Score=44.98 Aligned_cols=88 Identities=17% Similarity=0.194 Sum_probs=51.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh---hHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL---IRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~---I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
..+.-||..+|++.++++| +.++++|+= +... ...-|.. |+++. ..|...+. +. ..+ ....-|
T Consensus 118 ~apaip~al~l~~~l~~~G---~~Vf~lTGR-~e~~r~~T~~nL~~~G~~~~----~~LiLR~~---~d-~~~-~~~~yK 184 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELG---IKIFLLSGR-WEELRNATLDNLINAGFTGW----KHLILRGL---ED-SNK-TVVTYK 184 (229)
T ss_pred CCCCCHHHHHHHHHHHHCC---CEEEEEcCC-ChHHHHHHHHHHHHcCCCCc----CeeeecCC---CC-CCc-hHhHHH
Confidence 4578899999999999999 999999985 2222 3333433 55431 12222110 00 000 011127
Q ss_pred HHHHHHHHHHhCCCCCccEE-EEcCCcCchH
Q 008499 461 VQAFNNTLEKYGTDRKNLSV-YIGDSVGDLL 490 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~vi-yiGDs~~Dl~ 490 (563)
....+++.++ +.+|+ .|||-.+||.
T Consensus 185 s~~R~~l~~~-----GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 185 SEVRKSLMEE-----GYRIWGNIGDQWSDLL 210 (229)
T ss_pred HHHHHHHHhC-----CceEEEEECCChHHhc
Confidence 6676676652 34555 7999999994
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.038 Score=51.74 Aligned_cols=38 Identities=8% Similarity=0.108 Sum_probs=33.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS 427 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~ 427 (563)
.+..|||+.+|++.+.++ .+++|.|++ +..+.+.++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~----yei~I~Ts~-~~~yA~~il~~ 77 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW----YELVIFTAS-LEEYADPVLDI 77 (162)
T ss_pred EEEECCCHHHHHHHHHhc----CEEEEEcCC-cHHHHHHHHHH
Confidence 468999999999999864 799999999 78899988876
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.29 Score=52.10 Aligned_cols=47 Identities=26% Similarity=0.304 Sum_probs=37.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCcc--EEEEcCCcCchHHhhh-----cCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNL--SVYIGDSVGDLLCLLE-----ADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~--viyiGDs~~Dl~~l~~-----Ad~givi~ 502 (563)
.+.+|...++.+++..+....+. .+|+||+.||..|+.. +++||.++
T Consensus 298 ~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg 351 (384)
T PLN02580 298 IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS 351 (384)
T ss_pred CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe
Confidence 36799999999998876532222 4899999999999996 47788886
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.15 Score=50.97 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=33.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
.+.+|...++.+++..+.. ...++|+||+.||..|+..+
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~ 202 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVV 202 (244)
T ss_pred CCCCHHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHH
Confidence 4678999999999887653 46899999999999999998
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >COG5398 Heme oxygenase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.44 E-value=10 Score=36.75 Aligned_cols=190 Identities=18% Similarity=0.231 Sum_probs=102.7
Q ss_pred HHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHH
Q 008499 17 ARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK-GVLEEL 95 (563)
Q Consensus 17 ~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~-~i~~E~ 95 (563)
+..|....+.....+-+.-|+..+-.|-++.+.|+..+.|=+.+..++-++...-. +++ . +..+.- .+.+--
T Consensus 4 a~~lR~gt~~ah~~aEnv~fmkcfLkg~V~~e~f~kl~~n~yf~ysaleaa~~~~~---d~~-~---l~~i~fp~lnr~~ 76 (238)
T COG5398 4 AFKLRQGTQKAHTVAENVGFMKCFLKGVVERESFRKLLANLYFVYSALEAATQIHK---DNP-I---LSSIYFPELNRKA 76 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHhc---cCc-h---hhhccchhhhhHH
Confidence 34444433322223334569999999999999999999999988887776544322 221 1 111100 011111
Q ss_pred HHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH------H
Q 008499 96 KMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA------F 169 (563)
Q Consensus 96 ~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~------~ 169 (563)
.+-+.+...+|-+..+.+.++|++.+|++++...+.... +.| +.-|+.-|. .
T Consensus 77 tle~dl~~yyg~nwre~I~~sp~t~~yv~rv~~iaa~ap--------------------~lL--Iah~ytRyLGdlsggq 134 (238)
T COG5398 77 TLEKDLLYYYGNNWRENIQPSPATIAYVDRVRYIAATAP--------------------ELL--IAHNYTRYLGDLSGGQ 134 (238)
T ss_pred HhhcCHHHHhcccHHHhcCcChhHHHHHHHHHHHHhcCc--------------------chh--HHHHHHHHHhcCCCcH
Confidence 233334445564445678899999999999999885321 111 223433331 1
Q ss_pred HHHHHHhh-ccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhh
Q 008499 170 LGKEFHAL-LNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240 (563)
Q Consensus 170 ig~~~~~~-~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw 240 (563)
+-+.++.. ......+..+.++=+. ++=..+-...++.+|++ .+++++..++.+.-.-+-.+-.+.+
T Consensus 135 ~l~ki~q~~~~L~~~gtaFy~F~dl---~dek~fK~~YR~~ld~l--~ldeAt~~rIvdeAn~aF~~N~~~~ 201 (238)
T COG5398 135 ILKKIAQSALELSEGGTAFYEFEDL---GDEKAFKDEYRQNLDSL--ELDEATKLRIVDEANDAFDFNMQMF 201 (238)
T ss_pred HHHHHHHHHhccccccceeeeHhhc---chhhhHHHHHHHHhhcc--cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333321 1111122233333332 24455666788888865 4788887777665444444333333
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.78 E-value=0.12 Score=61.83 Aligned_cols=45 Identities=24% Similarity=0.406 Sum_probs=35.1
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
+..|..+.+-.++. .+..+.+||||.||..|++.|||||.|+...
T Consensus 779 PlQKA~Vv~lVk~~----~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~E 823 (1151)
T KOG0206|consen 779 PLQKALVVKLVKKG----LKAVTLAIGDGANDVSMIQEAHVGVGISGQE 823 (1151)
T ss_pred HHHHHHHHHHHHhc----CCceEEEeeCCCccchheeeCCcCeeeccch
Confidence 35677777666432 2467899999999999999999999997553
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.96 Score=42.57 Aligned_cols=85 Identities=19% Similarity=0.275 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEccccChHhhH---HHHhCCCCcceEEe--eccEecCccccCcccccCCCCCCcHHHHHHH
Q 008499 393 TTFFQKVVKNENLNANVHVLSYCWCGDLIR---ASFSSGLNALNVHA--NEFSFKESISTGEIIEKVESPIDKVQAFNNT 467 (563)
Q Consensus 393 ~efl~~l~~~g~~~~~v~IvS~gws~~~I~---~~L~~~l~~~~I~a--N~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~ 467 (563)
..++..++++| ..++.|++- +.-=++ ..|+.. .+| . |.+.| +|. ++-....+|...+++
T Consensus 120 ~qLI~MHq~RG---D~i~FvTGR-t~gk~d~vsk~Lak~---F~i-~~m~pv~f-----~Gd--k~k~~qy~Kt~~i~~- 183 (237)
T COG3700 120 RQLIDMHQRRG---DAIYFVTGR-TPGKTDTVSKTLAKN---FHI-TNMNPVIF-----AGD--KPKPGQYTKTQWIQD- 183 (237)
T ss_pred HHHHHHHHhcC---CeEEEEecC-CCCcccccchhHHhh---ccc-CCCcceee-----ccC--CCCcccccccHHHHh-
Confidence 56889999999 889999874 322222 223221 122 1 22233 332 111234567766543
Q ss_pred HHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 468 LEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 468 ~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
...-|.+|||.+|+.+.+.|++ ||-+
T Consensus 184 --------~~~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 184 --------KNIRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred --------cCceEEecCCchhhhHHHhcCccceeE
Confidence 2346899999999999999997 6554
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.93 E-value=7.5 Score=38.07 Aligned_cols=112 Identities=12% Similarity=0.191 Sum_probs=69.3
Q ss_pred CHHHHHHHhc------cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCcc
Q 008499 375 NLEDIKKAGE------RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESI 445 (563)
Q Consensus 375 ~~~~i~~~~~------~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~ 445 (563)
+.++..+++. .+..++-..+++-.+++++ ..+++.+. ..-...+|+. |+.. ..|+|-+
T Consensus 82 d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~-----k~~FTNa~-k~HA~r~Lk~LGieDcFegii~~e------- 148 (244)
T KOG3109|consen 82 DADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR-----KWIFTNAY-KVHAIRILKKLGIEDCFEGIICFE------- 148 (244)
T ss_pred CHHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc-----EEEecCCc-HHHHHHHHHHhChHHhccceeEee-------
Confidence 4566666654 3444555688888888643 67888774 3333334555 6532 2233322
Q ss_pred ccCcccccCCCCCCcH--HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 446 STGEIIEKVESPIDKV--QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 446 ~tG~~~~~~~~g~~K~--~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
...+.-.+-.||. .+++...+..+.+++.+++++-||.+-+...+..|. +++++
T Consensus 149 ---~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~ 205 (244)
T KOG3109|consen 149 ---TLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVG 205 (244)
T ss_pred ---ccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEE
Confidence 1111111223453 567777777778778999999999999999999998 45555
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.6 Score=37.44 Aligned_cols=42 Identities=26% Similarity=0.384 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCc-cEEEcC
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGS 503 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-givi~~ 503 (563)
...+...++..+.+ ..++++|||+ .+|+.+...+++ +|.+..
T Consensus 7 p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~t 50 (75)
T PF13242_consen 7 PGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLT 50 (75)
T ss_dssp HHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESS
T ss_pred HHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECC
Confidence 34566666666553 5789999999 999999999999 666653
|
... |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=89.47 E-value=0.31 Score=56.68 Aligned_cols=47 Identities=21% Similarity=0.257 Sum_probs=38.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc---CccEEEcCCh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA---DIGIVIGSSS 505 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A---d~givi~~~~ 505 (563)
.+.+|...++.+++.. ..+.++++||+.||+.|+..+ +++|.+|.++
T Consensus 654 ~~vnKG~al~~ll~~~---~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 654 AGVNKGRAVRRLLEAG---PYDFVLAIGDDTTDEDMFRALPETAITVKVGPGE 703 (726)
T ss_pred CCCCHHHHHHHHHhcC---CCCEEEEECCCCChHHHHHhcccCceEEEECCCC
Confidence 4568999999998732 246899999999999999986 5688888654
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.20 E-value=0.37 Score=46.90 Aligned_cols=44 Identities=27% Similarity=0.219 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHHhCCCCCcc-EEEEcCCcCchHHhhhcCccEEEc
Q 008499 459 DKVQAFNNTLEKYGTDRKNL-SVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~-viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
+|.++.+-++..+..-.+.+ ++.+|||.||++|+...|..++++
T Consensus 191 gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV~ 235 (274)
T COG3769 191 GKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIVK 235 (274)
T ss_pred CccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheeec
Confidence 36555555554432222344 788999999999999999988886
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.20 E-value=0.42 Score=54.71 Aligned_cols=28 Identities=39% Similarity=0.635 Sum_probs=23.7
Q ss_pred cEEEEcCCcCchHHhhhcCccEEEc-CCh
Q 008499 478 LSVYIGDSVGDLLCLLEADIGIVIG-SSS 505 (563)
Q Consensus 478 ~viyiGDs~~Dl~~l~~Ad~givi~-~~~ 505 (563)
-|-..|||+||-|+|+.|||||++| +.+
T Consensus 707 iVaVTGDGVNDsPALKKADIGVAMGiaGS 735 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKADIGVAMGIAGS 735 (1019)
T ss_pred EEEEeCCCcCCChhhcccccceeeccccc
Confidence 3446899999999999999999997 443
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=85.70 E-value=4.8 Score=37.97 Aligned_cols=108 Identities=15% Similarity=0.093 Sum_probs=61.6
Q ss_pred HHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEEeeccEecCccccCcccccCCCC
Q 008499 381 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVHANEFSFKESISTGEIIEKVESP 457 (563)
Q Consensus 381 ~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g 457 (563)
+.++.+.|.|+..+.|+.|+.+| +.+.+-|-.+..+.-+.+|+. ++. ........ ..|...-...
T Consensus 39 ~~g~~v~lypdv~~iL~~L~~~g---v~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~---------~~F~~~eI~~ 106 (169)
T PF12689_consen 39 SRGEEVSLYPDVPEILQELKERG---VKLAVASRTDEPDWARELLKLLEIDDADGDGVPLI---------EYFDYLEIYP 106 (169)
T ss_dssp TT--EE---TTHHHHHHHHHHCT-----EEEEE--S-HHHHHHHHHHTT-C-------------------CCECEEEESS
T ss_pred CCCCEEEeCcCHHHHHHHHHHCC---CEEEEEECCCChHHHHHHHHhcCCCccccccccch---------hhcchhheec
Confidence 45678999999999999999999 999999976677888888876 443 00011110 0111111122
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.+|...++++.++.+. .+..++++=|-..-......-||-.+.
T Consensus 107 gsK~~Hf~~i~~~tgI-~y~eMlFFDDe~~N~~~v~~lGV~~v~ 149 (169)
T PF12689_consen 107 GSKTTHFRRIHRKTGI-PYEEMLFFDDESRNIEVVSKLGVTCVL 149 (169)
T ss_dssp S-HHHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-EEEE
T ss_pred CchHHHHHHHHHhcCC-ChhHEEEecCchhcceeeEecCcEEEE
Confidence 3799999999988877 467899999998877777765553333
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=85.23 E-value=8.9 Score=38.97 Aligned_cols=28 Identities=14% Similarity=0.008 Sum_probs=24.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~g 415 (563)
..+.-||+.+|++.++++| +.+++||+=
T Consensus 143 ~ApAlp~al~ly~~l~~~G---~kIf~VSgR 170 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLG---FKIIFLSGR 170 (275)
T ss_pred cCCCChHHHHHHHHHHHCC---CEEEEEeCC
Confidence 3466679999999999999 999999984
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=85.20 E-value=1.7 Score=44.59 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=40.3
Q ss_pred cCCCC-chHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeec
Q 008499 385 RLSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANE 438 (563)
Q Consensus 385 ~i~lr-pG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~ 438 (563)
++++| ||..++++.|+++| +++.|+|.| +.+.+...|+. |+.. ..|+||.
T Consensus 143 ~v~irdPgV~EaL~~LkekG---ikLaIaTS~-~Re~v~~~L~~lGLd~YFdvIIs~G 196 (301)
T TIGR01684 143 PVRIRDPRIYDSLTELKKRG---CILVLWSYG-DRDHVVESMRKVKLDRYFDIIISGG 196 (301)
T ss_pred ccccCCHHHHHHHHHHHHCC---CEEEEEECC-CHHHHHHHHHHcCCCcccCEEEECC
Confidence 36688 99999999999999 999999988 68888888887 7753 2455554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.70 E-value=0.8 Score=53.32 Aligned_cols=42 Identities=26% Similarity=0.318 Sum_probs=34.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++..|.+.+.++.+ .++.+=+.|||.||-.+|+.||+||-+.
T Consensus 837 sP~qK~~Lie~lQk-----l~y~VgfCGDGANDCgALKaAdvGISLS 878 (1140)
T KOG0208|consen 837 SPDQKAELIEALQK-----LGYKVGFCGDGANDCGALKAADVGISLS 878 (1140)
T ss_pred CchhHHHHHHHHHh-----cCcEEEecCCCcchhhhhhhcccCcchh
Confidence 45678777777765 2467789999999999999999999886
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.45 E-value=7.6 Score=36.41 Aligned_cols=90 Identities=16% Similarity=0.218 Sum_probs=59.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-...|...+.+..+++.| +.++|||.| +..-+..+..+ +++.+ +..++ +. ...+
T Consensus 45 ~~~tpe~~~W~~e~k~~g---i~v~vvSNn-~e~RV~~~~~~l~v~fi--------~~A~K-------P~------~~~f 99 (175)
T COG2179 45 PDATPELRAWLAELKEAG---IKVVVVSNN-KESRVARAAEKLGVPFI--------YRAKK-------PF------GRAF 99 (175)
T ss_pred CCCCHHHHHHHHHHHhcC---CEEEEEeCC-CHHHHHhhhhhcCCcee--------ecccC-------cc------HHHH
Confidence 456777888888888888 999999987 66666665544 44211 11111 11 1345
Q ss_pred HHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEE
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 501 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi 501 (563)
++-+++.+.+ ..+++.|||.. ||+..-..+++ -|.+
T Consensus 100 r~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~~tIlV 137 (175)
T COG2179 100 RRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGMRTILV 137 (175)
T ss_pred HHHHHHcCCC-hhHEEEEcchhhhhhhcccccCcEEEEE
Confidence 5556666653 57899999995 89888888887 3444
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=84.33 E-value=3.4 Score=41.03 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCcc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG 498 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g 498 (563)
...++..+++.+.....++++|||+ .+|+.+...+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 4566666666553334579999999 6999999999984
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=84.24 E-value=4.4 Score=42.64 Aligned_cols=110 Identities=22% Similarity=0.237 Sum_probs=65.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--C-------CC--cceEEee--ccEe-cCcc-----
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--G-------LN--ALNVHAN--EFSF-KESI----- 445 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~-------l~--~~~I~aN--~l~~-~~g~----- 445 (563)
-+...||+.++++.++++| .++.|+|.+ ..++++.++.. + +. ...|++. ...| .++.
T Consensus 182 yv~~~pgl~elL~~Lr~~G---~klfLvTNS-~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v 257 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHG---KKLFLLTNS-DYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV 257 (343)
T ss_pred HhccchhHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE
Confidence 4677999999999999999 999999998 57777777665 3 11 1233332 2222 2111
Q ss_pred --ccCccc---------ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhh-hcCc-cEEEcC
Q 008499 446 --STGEII---------EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLL-EADI-GIVIGS 503 (563)
Q Consensus 446 --~tG~~~---------~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~-~Ad~-givi~~ 503 (563)
.+|... +.+-+ .+-...+.+.+. . .+.+++||||.. +|+.... .++. .+.|.+
T Consensus 258 ~~~~g~~~~~~~~~l~~g~vY~-gGn~~~~~~~l~---~-~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 258 DVETGSLKWGEVDGLEPGKVYS-GGSLKQFHELLK---W-RGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred eCCCCcccCCccccccCCCeEe-CCCHHHHHHHHC---C-CCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 122211 11111 123344555543 2 247899999974 7888777 6776 455543
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.74 E-value=0.97 Score=51.70 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=31.2
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.|..++..+.+ .++.+...|||.||..+|++|+|||++-++
T Consensus 794 QKE~ii~tlK~-----~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 794 QKEFIITTLKK-----LGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred hHHHHHHHHHh-----cCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 44444444443 257799999999999999999999998644
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=83.41 E-value=2.2 Score=43.81 Aligned_cols=50 Identities=8% Similarity=0.054 Sum_probs=40.4
Q ss_pred cCCCC-chHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeec
Q 008499 385 RLSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANE 438 (563)
Q Consensus 385 ~i~lr-pG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~ 438 (563)
.+++| ||+.++++.|+++| +++.|+|.| +.+.+...|+. |+.. ..|+|+.
T Consensus 145 ~v~irdp~V~EtL~eLkekG---ikLaIvTNg-~Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 145 PVRIRDPFVYDSLDELKERG---CVLVLWSYG-NREHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred ccccCChhHHHHHHHHHHCC---CEEEEEcCC-ChHHHHHHHHHcCCCccccEEEECC
Confidence 46788 99999999999999 999999988 68888888887 7643 2455554
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=82.22 E-value=1.2 Score=52.46 Aligned_cols=40 Identities=18% Similarity=0.117 Sum_probs=31.8
Q ss_pred CCCCcHHHHHHHHHH---hCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 456 SPIDKVQAFNNTLEK---YGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~---~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
.+.+|..+++.+++. .+. ..+.++++||+.||..|+..++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~-~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGM-LPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCC-CcccEEEEcCCccHHHHHHHhh
Confidence 467899999998753 232 2467999999999999999875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 563 | ||||
| 2rd3_A | 223 | Crystal Structure Of Tena Homologue (Hp1287) From H | 4e-09 | ||
| 3ibx_A | 221 | Crystal Structure Of F47y Variant Of Tena (Hp1287) | 1e-08 | ||
| 2gm7_A | 221 | Tena HomologTHI-4 Thiaminase From Pyrobaculum Aerop | 2e-06 | ||
| 3mvu_A | 226 | Crystal Structure Of A Tena Family Transcription Re | 7e-06 | ||
| 1yaf_A | 263 | Structure Of Tena From Bacillus Subtilis Length = 2 | 6e-05 | ||
| 2qcx_A | 263 | Crystal Structure Of Bacillus Subtilis Tena Y112f M | 9e-05 | ||
| 1tyh_A | 248 | Crystal Structure Of Transcriptional Activator Tena | 2e-04 | ||
| 1to9_A | 260 | Crystal Structure Of Thi-4 Protein From Bacillus Su | 3e-04 | ||
| 1to9_B | 260 | Crystal Structure Of Thi-4 Protein From Bacillus Su | 3e-04 |
| >pdb|2RD3|A Chain A, Crystal Structure Of Tena Homologue (Hp1287) From Helicobacter Pylori Length = 223 | Back alignment and structure |
|
| >pdb|3IBX|A Chain A, Crystal Structure Of F47y Variant Of Tena (Hp1287) From Helicobacter Pylori Length = 221 | Back alignment and structure |
|
| >pdb|2GM7|A Chain A, Tena HomologTHI-4 Thiaminase From Pyrobaculum Aerophilum Length = 221 | Back alignment and structure |
|
| >pdb|3MVU|A Chain A, Crystal Structure Of A Tena Family Transcription Regulator (Tm1040_3656) From Silicibacter Sp. Tm1040 At 1.80 A Resolu Length = 226 | Back alignment and structure |
|
| >pdb|1YAF|A Chain A, Structure Of Tena From Bacillus Subtilis Length = 263 | Back alignment and structure |
|
| >pdb|2QCX|A Chain A, Crystal Structure Of Bacillus Subtilis Tena Y112f Mutant Complexed With Formyl Aminomethyl Pyrimidine Length = 263 | Back alignment and structure |
|
| >pdb|1TYH|A Chain A, Crystal Structure Of Transcriptional Activator Tena From Bacillus Subtilis Length = 248 | Back alignment and structure |
|
| >pdb|1TO9|A Chain A, Crystal Structure Of Thi-4 Protein From Bacillus Subtilis Length = 260 | Back alignment and structure |
|
| >pdb|1TO9|B Chain B, Crystal Structure Of Thi-4 Protein From Bacillus Subtilis Length = 260 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 563 | |||
| 2a2m_A | 258 | Hypothetical protein BT3146; putative TENA family | 6e-42 | |
| 3ibx_A | 221 | TENA, HP1287, putative thiaminase II; vitamin B1, | 3e-39 | |
| 2qcx_A | 263 | Transcriptional activator TENA; UP-DOWN bundle, hy | 2e-38 | |
| 1rtw_A | 220 | Transcriptional activator, putative; PF1337, TENA, | 3e-37 | |
| 2f2g_A | 221 | SEED maturation protein PM36 homolog; TENA_THI-4 d | 7e-37 | |
| 2gm8_A | 221 | TENA homolog/THI-4 thiaminase; transcription, tran | 2e-36 | |
| 3no6_A | 248 | Transcriptional activator TENA; structural genomic | 4e-36 | |
| 1udd_A | 226 | Transcriptional regulator; helix-bundle, lipid bin | 4e-36 | |
| 2qzc_A | 214 | Transcriptional activator TENA-1; heme oxygenase-l | 5e-36 | |
| 3mvu_A | 226 | TENA family transcriptional regulator; TENA/THI-4/ | 5e-35 | |
| 1z72_A | 225 | Transcriptional regulator, putative; structu genom | 6e-32 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 9e-30 | |
| 1wwm_A | 190 | Hypothetical protein TT2028; TENA/THI-4 family, pu | 6e-17 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 7e-08 | |
| 1rcw_A | 231 | CT610, CADD; iron, DI-iron, redox enzyme, metallo | 1e-07 | |
| 3oql_A | 262 | TENA homolog; transcriptional activator, structura | 5e-07 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-06 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 6e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 1e-05 | |
| 2g09_A | 297 | Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMP | 1e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-05 |
| >2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A Length = 258 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 6e-42
Identities = 39/239 (16%), Positives = 82/239 (34%), Gaps = 29/239 (12%)
Query: 4 IPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKA 63
KS P + L +LW +V + + + +A+G L + + QD ++
Sbjct: 38 TTLKSDVPAADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFR 97
Query: 64 FSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYT 123
Y A CA D+ + K E ++++ + W A + Y
Sbjct: 98 GRDDYATAATCAQDETLREFFKAKAKSYDE---YNETYHQTWHLREASGLIPGTDIKDYA 154
Query: 124 EFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEG 183
++ A + + Y M PC L+ ++ L
Sbjct: 155 DYEAYVA------------------GSLASPYMCVVMLPCEYLWPWIANF---LDGYTPT 193
Query: 184 NHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242
N Y WI+ A + ++L++ + ++ ++++ AM E++ F +
Sbjct: 194 NSLYRFWIEWNGGTPNGAYQM--GNMLEQYRDKIDEDKA---VEIFNTAMNYELKVFTS 247
|
| >3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A Length = 221 | Back alignment and structure |
|---|
Score = 142 bits (358), Expect = 3e-39
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
+ PF + G L+ + FR YI QD+ +L +++ + L A D+ S +
Sbjct: 22 CISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQD 81
Query: 91 VLE-ELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPF 147
+L E+ +H+ +++E ++ A YT ++LA
Sbjct: 82 ILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEG----------------- 124
Query: 148 EKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNE 207
A+ C Y + + + NA E + Y WI YSS+ FQA N
Sbjct: 125 -FKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNALE-HAFYGHWIKGYSSKEFQACVNWNI 182
Query: 208 DLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+LLD L+++ + +E++ +++++ + E F+
Sbjct: 183 NLLDSLTLASSKQEIEKLKEIFITTSEYEYLFW 215
|
| >2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A Length = 263 | Back alignment and structure |
|---|
Score = 141 bits (355), Expect = 2e-38
Identities = 41/241 (17%), Positives = 88/241 (36%), Gaps = 24/241 (9%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
++ + + + PF + G L ++ F++Y+ QD ++L
Sbjct: 17 KAGSENLYFQGMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLT 76
Query: 63 AFSQAYELAEECADDDDAKLSISELRKGVLE-ELKMHDSFVKEWGTDLAKMATV--NSAT 119
F++ A D ++ +G E E+ +H F + + +
Sbjct: 77 HFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTA 136
Query: 120 VKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLN 179
+T + + + A L A+ PC LY +G+ LL+
Sbjct: 137 YSFTSHMYRSV------------------LSGNFAEILAALLPCYWLYYEVGE---KLLH 175
Query: 180 ANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEF 239
+ G+ Y KWI Y + F+ + + D+L+ + T E +++ + + E +F
Sbjct: 176 CDPGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQF 235
Query: 240 F 240
+
Sbjct: 236 W 236
|
| >1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3 Length = 220 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 3e-37
Identities = 41/210 (19%), Positives = 82/210 (39%), Gaps = 24/210 (11%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
+ F + +A +K E F ++ D++F+K + L A DD +E
Sbjct: 17 FLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPFF-AESIYY 75
Query: 91 VLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKT 150
+ +EL+M + +E G L ++ Y +LL+ AS G
Sbjct: 76 ISKELEMFEKKAQELGISLNGE--IDWRAKSYVNYLLSVAS------LGS---------- 117
Query: 151 KVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLL 210
A+ + Y K + + PY ++I+++SS+ F + E +L
Sbjct: 118 --FLEGFTALYCEEKAYYEAWKW---VRENLKERSPYQEFINHWSSQEFGEYVKRIEKIL 172
Query: 211 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ L+ E + +++ + K E+ F+
Sbjct: 173 NSLAEKHGEFEKERAREVFKEVSKFELIFW 202
|
| >2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A* Length = 221 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 7e-37
Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 24/214 (11%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLS----ISE 86
A F V + G++ L +FR ++ QD+ F++ F A D + S +
Sbjct: 21 ATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEVVLG 80
Query: 87 LRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATP 146
+ +E++ +W D + A +Y FL S +V+
Sbjct: 81 GIASLNDEIEWFKREGSKWDVDFS-TVVPQRANQEYGRFLEDLMSSEVK----------- 128
Query: 147 FEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN 206
+ A +Y H L + N+ T + ++ F+
Sbjct: 129 ------YPVIMTAFWAIEAVYQESFA--HCLEDGNKTPVELTGACHRWGNDGFKQYCSSV 180
Query: 207 EDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+++ ++ + +GE L E + + ++LEV F+
Sbjct: 181 KNIAERCLENASGEVLGEAEDVLVRVLELEVAFW 214
|
| >2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A* Length = 221 | Back alignment and structure |
|---|
Score = 134 bits (337), Expect = 2e-36
Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 27/230 (11%)
Query: 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEE 73
G+ L + + PF L +G L +E F++Y+ QD+++L F++A LA
Sbjct: 9 HGVTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAAS 68
Query: 74 CADDDDAKLSISELRKGVL-EELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATA 130
A D + EL G + E+ +++ +KE G L A N V Y +L +T
Sbjct: 69 RAPSVDLMKTALELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTC 128
Query: 131 SGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKW 190
+ + A+ PC YA + + L N H Y KW
Sbjct: 129 ------------------ALEGFYQCMAALLPCFWSYAEIAERHGGKLRENP-VHVYKKW 169
Query: 191 IDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
Y S ++ + +LD +G + + + +A E+EF+
Sbjct: 170 ASVYLSPEYRGLVERLRAVLDS-----SGLSAEELWPYFKEASLYELEFW 214
|
| >3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} Length = 248 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 4e-36
Identities = 45/214 (21%), Positives = 81/214 (37%), Gaps = 23/214 (10%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
F L +G L + R Y+ D +LK F+ Y + + + E +
Sbjct: 37 IYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEF 96
Query: 91 VLE-ELKMHDSFVKEWG---TDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATP 146
+LE E++ H+ ++ K + Y + + A
Sbjct: 97 MLEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAF--------------- 141
Query: 147 FEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN 206
+ AA+T+ AM+PC +YA +GK N+ +KW YS+E
Sbjct: 142 --ARENAAFTIAAMAPCPYVYAVIGKRAMEDPKLNK-ESVTSKWFQFYSTE-MDELVDVF 197
Query: 207 EDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ L+D+L+ + E I++ + Q+ E FF
Sbjct: 198 DQLMDRLTKHCSETEKKEIKENFLQSTIHERHFF 231
|
| >1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3 Length = 226 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-36
Identities = 47/212 (22%), Positives = 75/212 (35%), Gaps = 25/212 (11%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
PF V L SG L LE F+ Y+ QDF++L ++A + A+ I R
Sbjct: 20 IFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEYPLMAELIELARDE 79
Query: 91 VLEELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
V E++ + +KE L Y +F+LATA
Sbjct: 80 VTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATA------------------ 121
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
L A+ PC YA + + L N Y +W Y S + +
Sbjct: 122 YKGNIIEGLTALLPCFWSYAEIAEYHKDKLRDNP-IKIYREWGKVYLSNEYLNLVGRLRK 180
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++D D + +++ K E+ F+
Sbjct: 181 IIDSSGH----SGYDRLRRIFITGSKFELAFW 208
|
| >2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2} Length = 214 | Back alignment and structure |
|---|
Score = 133 bits (335), Expect = 5e-36
Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 32/212 (15%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
+ F + + G+L L+ FR+Y+ QD +++ +A +A D ++ +
Sbjct: 22 YVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTKILNLVFSS 81
Query: 91 VLEELKMHDSFVKEWGTDLAKM--ATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
+ L+ H + + N YT L A+
Sbjct: 82 RDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYANLDW-------------- 127
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
L A +PCM Y+ +G + N Y W Y+S ++
Sbjct: 128 -----NKFLVAWTPCMFGYSIVGDYVI-----DSPNEVYKTWASFYASTEYKKRIEAILY 177
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
LD++S + + ++ +++ E+ F+
Sbjct: 178 ALDEVS------ITEDLLNIFINSVRFEIGFW 203
|
| >3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} Length = 226 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 5e-35
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 31/219 (14%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
+ F L +G L E F HY+ QD+ FL FS+A+ LA ++ L+
Sbjct: 24 YTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTVNA 83
Query: 91 VL-EELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPF 147
++ EE+++H + G + + + YT F+L
Sbjct: 84 LVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAG----------------- 126
Query: 148 EKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNE 207
+ L A++PC+ Y E L A + Y WID Y + +QA+
Sbjct: 127 -YSGDLLDLLAALAPCVMGYG----EIGKRLTAEATSTLYGDWIDTYGGDDYQAACKAVG 181
Query: 208 DLLDKLSVSLTG------EELDIIEKLYHQAMKLEVEFF 240
LLD G + + +H A +LEV F+
Sbjct: 182 TLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGFW 220
|
| >1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A Length = 225 | Back alignment and structure |
|---|
Score = 122 bits (306), Expect = 6e-32
Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 27/241 (11%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
A+ + + + L +++ A+ F L +G ++ + + Y+ QD+HF
Sbjct: 3 AMETQDYAFQPGLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFD 62
Query: 63 AFSQAYELAEECADDDDAKLSISELRKGVLEE-LKMHDSFVKEWGTDLAKMATV--NSAT 119
AF AD ++KL ++ + + KE V + T
Sbjct: 63 AFLSMLGACVAHADKLESKLRFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVT 122
Query: 120 VKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLN 179
+ + + + + A+ L + LY G +
Sbjct: 123 KAFQDLMYSAV------------------ASSDYAHLLVMLVIAEGLYLDWGSK----DL 160
Query: 180 ANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEF 239
A + +++WI+ + F D L+++ + E+L +++ ++QA+ LE+ F
Sbjct: 161 ALPEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGKNR--EDLTELQQRWNQAVALELAF 218
Query: 240 F 240
F
Sbjct: 219 F 219
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Length = 550 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 9e-30
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 23/213 (10%)
Query: 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91
+ F +A G L+ + F+ +I QD+ +L +++ + +A A + + GV
Sbjct: 350 INHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVIVGGV 409
Query: 92 LEELKMHDSFVKE----WGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPF 147
E+ H+ +KE D + A Y+ + + +
Sbjct: 410 RTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRRG------------NW 457
Query: 148 EKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNE 207
++ + ++PC+ Y + + A EG Y +W + Y+S ++ + + E
Sbjct: 458 QELVAS------LTPCLMGYGEALTKMKGKVTAPEG-SVYHEWCETYASSWYREAMDEGE 510
Query: 208 DLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
LL+ + + E+LD + +Y + +LE F+
Sbjct: 511 KLLNHILETYPPEQLDTLVTIYAEVCELETNFW 543
|
| >1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 78.2 bits (192), Expect = 6e-17
Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 35/198 (17%)
Query: 43 GNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFV 102
L E FR ++ QD+ F++A + A + + + +EEL
Sbjct: 24 LRLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQA-HRAPLVQALMATVEELDWL---- 78
Query: 103 KEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP 162
G + A V+ Y L Y +
Sbjct: 79 LLQGASPS--APVHPVRAGYIALLEEMGRLPYA-------------------YRVVFFYF 117
Query: 163 CMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEEL 222
L+ A + P+ + ++ + FQA E L L L E +
Sbjct: 118 LNGLF------LEAWAHHVPEEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEVV 171
Query: 223 DIIEKLYHQAMKLEVEFF 240
+ ++ E +
Sbjct: 172 ---RTYLRRILEAEKATW 186
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.8 bits (162), Expect = 1e-11
Identities = 86/624 (13%), Positives = 164/624 (26%), Gaps = 211/624 (33%)
Query: 7 KSPSPEEEGLARRL-WI-KFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAF 64
S RL W K+E + + + ++ FL +
Sbjct: 56 MSKDAVSG--TLRLFWTLLSKQEEMVQKF----------------VEEVLRINYKFLMS- 96
Query: 65 SQAYELAEECADDDDAKLSISELRKGVLEELKMH---DSFVKEWGTDLAKMATVNSATVK 121
+ E E R +++ F K + L + A
Sbjct: 97 ----PIKTEQRQPSMMTRMYIEQRD------RLYNDNQVFAKYNVSRLQPYLKLRQA--- 143
Query: 122 YTEFLLATASGK---VEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178
LL K ++GV G G KT VA + +
Sbjct: 144 ----LLELRPAKNVLIDGVLGSG-------KTWVALDVC---------------LSYKVQ 177
Query: 179 NANEGN-HPYTKWID--NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 235
+ W++ N +S LQ LL ++ + T D + + +
Sbjct: 178 CKMDFKIF----WLNLKNCNSPETVLEMLQK--LLYQIDPNWT-SRSDHSSNIKLRIHSI 230
Query: 236 EVE---FFCAQPLAQPTVVPLIKGHNPAGDRLIIFSD---------FDLTCTIV----DS 279
+ E ++P + L++ + F+L+C I+
Sbjct: 231 QAELRRLLKSKPYE---------------NCLLVLLNVQNAKAWNAFNLSCKILLTTRFK 275
Query: 280 SAILAEIAIVTAPKS--------DQNQPENQLGR---MSSGELR---------------- 312
A T S ++ ++ L + +L
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE 335
Query: 313 ------NTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVI 366
TW ++ IES + K ++LS F A+ I
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESS-----LNVLEPAEYRKMFDRLSVFPPSAH---I 387
Query: 367 ESGVL-------KGINLEDIKKAGERLSL--QDGCTT-------FFQKVVKNENLNANVH 410
+ +L ++ + + SL + + + + VK EN +H
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE-YALH 446
Query: 411 ---VLSY----CWCGDLIRASFSSG--LNALNVHANE----------------FSFKES- 444
V Y + D + + + + H F F E
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK 506
Query: 445 -ISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-------VGDLLC-LLEA 495
S ++ +Q L+ Y + YI D+ V +L L +
Sbjct: 507 IRHDSTAWNASGSILNTLQ----QLKFY---KP----YICDNDPKYERLVNAILDFLPKI 555
Query: 496 DIGIVIGSSSSLRRVGSQFGVTFI 519
+ ++ + L R+ I
Sbjct: 556 EENLICSKYTDLLRIALMAEDEAI 579
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 53/402 (13%), Positives = 108/402 (26%), Gaps = 104/402 (25%)
Query: 175 HALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMK 234
H E + Y + + ++F + +D+ D L+ EE+D I
Sbjct: 6 HMDFETGEHQYQYKDILSVFE-DAFVDN-FDCKDVQDMPKSILSKEEIDHI--------- 54
Query: 235 LEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKS 294
++ +G + F +
Sbjct: 55 ------------------IMSKDAVSGTLRL----FWTLLS------------------- 73
Query: 295 DQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQL 354
+ E + + LR + L E Q PS + + L
Sbjct: 74 ---KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ------PSMMTRMYIEQ--RDRLYND 122
Query: 355 SH-FEKRANSRVIESGVLKGINLEDIKKAGERLSLQ--DGC--TTFFQKVVKNE----NL 405
+ F K SR+ L+ L +++ A + + + G T V + +
Sbjct: 123 NQVFAKYNVSRLQPYLKLR-QALLELRPA-KNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 406 NANVHVLS--YCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463
+ + L+ C + + L L + S + ++ I +QA
Sbjct: 181 DFKIFWLNLKNCNSPETVLEM----LQKLLYQID----PNWTSRSDHSSNIKLRIHSIQA 232
Query: 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA-DIG---IVIGSSSSLRRVGSQFGVTFI 519
L K +N + + +V + A ++ ++ + S T I
Sbjct: 233 ELRRLLKS-KPYEN-CLLVLLNVQNAKA-WNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289
Query: 520 PLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFIL 561
L T E +L + + L
Sbjct: 290 S----LDHHSMTLTP------DEVKSLL---LKYLDCRPQDL 318
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 7e-08
Identities = 27/240 (11%), Positives = 65/240 (27%), Gaps = 62/240 (25%)
Query: 263 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQY 322
+ I DFD T T+ D+ + +
Sbjct: 6 KPFIICDFDGTITMNDNIINIMK----------------TFAP----------------- 32
Query: 323 TEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDI-KK 381
E+ + + ++ + + + G+L E+I
Sbjct: 33 -PEWMALKDGVLSKTL-------SIKEGVGR----------MF---GLLPSSLKEEITSF 71
Query: 382 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSF 441
E +++G F + ++ +V+S + + ++ N SF
Sbjct: 72 VLEDAKIREGFREFVAFINEH---EIPFYVIS-GGMDFFVYPLLEGIVEKDRIYCNHASF 127
Query: 442 KESISTGEIIEKVESPIDKVQAFN--NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499
+ + + + + + + + IGDSV D+ +D+
Sbjct: 128 DNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYI-IMIGDSVTDVEAAKLSDLCF 186
|
| >1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4 Length = 231 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 1e-07
Identities = 27/215 (12%), Positives = 56/215 (26%), Gaps = 33/215 (15%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLS----ISELRKG 90
F V + G L E + Y + +KAF + DD +A+ + + G
Sbjct: 25 TFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENG 84
Query: 91 VLEELKMHDSFVKEWGTDLAKMAT--VNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
+ + FV G ++ + A + +
Sbjct: 85 YPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMR------------------WC 126
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
A + A+ + +E G Y + + F +
Sbjct: 127 TGDSLAAGVAALYSYESQIPRIAREKI------RGLTEYFGFSNPEDYAYFTEHEEADVR 180
Query: 209 ---LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
L L ++ D + + + + F
Sbjct: 181 HAREEKALIEMLLKDDADKVLEASQEVTQSLYGFL 215
|
| >3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV} Length = 262 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 5e-07
Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 8/123 (6%)
Query: 17 ARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELA----- 71
A++L + + L + R Y+ + ++ F+
Sbjct: 22 AQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTR 81
Query: 72 -EECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKM--ATVNSATVKYTEFLLA 128
+D A+ + + L ++ L + V + +
Sbjct: 82 FGRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQ 141
Query: 129 TAS 131
T+S
Sbjct: 142 TSS 144
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 13/145 (8%)
Query: 357 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 414
F K RV LK + L+ K+ E L L +G + + N V S +
Sbjct: 48 FHKSLILRV---SKLKNMPLKLAKEVCESLPLFEGALELVSALKEK---NYKVVCFSGGF 101
Query: 415 CWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474
+ R L+ +N + G + + K +
Sbjct: 102 DLATNHYRDL----LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLLNIS 157
Query: 475 RKNLSVYIGDSVGDLLCLLEADIGI 499
+ N ++ +GD DL A I I
Sbjct: 158 KTN-TLVVGDGANDLSMFKHAHIKI 181
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 30/145 (20%), Positives = 51/145 (35%), Gaps = 13/145 (8%)
Query: 357 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 414
F + RV L G+ I + +L L G T + + + V+S +
Sbjct: 229 FAQSLQQRV---ATLAGLPATVIDEVAGQLELMPGARTTLRTLRRL---GYACGVVSGGF 282
Query: 415 CWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474
+ + L V ANE + TG ++ + K A ++ G
Sbjct: 283 RRIIEPLAEE----LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVP 338
Query: 475 RKNLSVYIGDSVGDLLCLLEADIGI 499
+V +GD D+ L A +GI
Sbjct: 339 MAQ-TVAVGDGANDIDMLAAAGLGI 362
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 13/145 (8%)
Query: 357 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 414
FE+ RV +LK + +E ++KA +R++ +G +++ V V+S +
Sbjct: 49 FEQSLRKRV---SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNR---GYVVAVVSGGF 102
Query: 415 CWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474
+ I+ GL+ AN K+ TG++ +V K + + G +
Sbjct: 103 DIAVNKIKEKL--GLDY--AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGIN 158
Query: 475 RKNLSVYIGDSVGDLLCLLEADIGI 499
++ +V +GD D+ +A + I
Sbjct: 159 LED-TVAVGDGANDISMFKKAGLKI 182
|
| >2g09_A Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMPH-1, pyrim nucleotidase 1, P5N-1, NT5C3 protein, AAH38029, BC038029, M LEAD poisoning; HET: PIN; 2.10A {Mus musculus} PDB: 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Length = 297 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 36/233 (15%)
Query: 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQ 321
+L I +DFD+T + + N + + + L++ +
Sbjct: 42 AKLQIITDFDMTLS-----------------RFSYNGKRCP----TCHNIIDNCKLVTDE 80
Query: 322 YTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK 381
+ Q E + E E + + + +++ +IE G+ K E +
Sbjct: 81 CRRKLLQLKEQYYAIEVDPVLTVEEKFPYMVE---WYTKSHGLLIEQGIPKAKLKEIVAD 137
Query: 382 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVH--ANE 438
+ + L++G FF K+ + V + S GD++ G+ NV +N
Sbjct: 138 SD--VMLKEGYENFFGKL---QQHGIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVSNF 191
Query: 439 FSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDL 489
F E+ ++ +K + + D N+ + +GDS GDL
Sbjct: 192 MDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNI-ILLGDSQGDL 243
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 13/145 (8%)
Query: 357 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 414
F R+ G+LKG + +R++L G T + ++S
Sbjct: 152 FNASFTRRI---GMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAK---GFKTAIISGGL 205
Query: 415 CWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474
++A + L+ +N ++++ T I + + +K Q + +
Sbjct: 206 DIFTQRLKARY--QLDY--AFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIA 261
Query: 475 RKNLSVYIGDSVGDLLCLLEADIGI 499
+N + GD DL L A GI
Sbjct: 262 TEN-IIACGDGANDLPMLEHAGTGI 285
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 13/138 (9%)
Query: 364 RVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--YCWCGDLI 421
RV LK + + + E L L + V + S + + D +
Sbjct: 158 RV---SKLKDAPEQILSQVRETLPLMPELPELVATL---HAFGWKVAIASGGFTYFSDYL 211
Query: 422 RASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVY 481
+ L+ +N TG+++ +V S K ++Y + N +V
Sbjct: 212 KEQ----LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHN-TVA 266
Query: 482 IGDSVGDLLCLLEADIGI 499
+GD DL+ + A +G+
Sbjct: 267 VGDGANDLVMMAAAGLGV 284
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 563 | |||
| 3no6_A | 248 | Transcriptional activator TENA; structural genomic | 100.0 | |
| 3mvu_A | 226 | TENA family transcriptional regulator; TENA/THI-4/ | 100.0 | |
| 3ibx_A | 221 | TENA, HP1287, putative thiaminase II; vitamin B1, | 100.0 | |
| 4fn6_A | 229 | Thiaminase-2, thiaminase II; alpha-helix, vitamin | 100.0 | |
| 2qcx_A | 263 | Transcriptional activator TENA; UP-DOWN bundle, hy | 100.0 | |
| 1z72_A | 225 | Transcriptional regulator, putative; structu genom | 100.0 | |
| 1rtw_A | 220 | Transcriptional activator, putative; PF1337, TENA, | 100.0 | |
| 2f2g_A | 221 | SEED maturation protein PM36 homolog; TENA_THI-4 d | 100.0 | |
| 2gm8_A | 221 | TENA homolog/THI-4 thiaminase; transcription, tran | 100.0 | |
| 1udd_A | 226 | Transcriptional regulator; helix-bundle, lipid bin | 100.0 | |
| 2qzc_A | 214 | Transcriptional activator TENA-1; heme oxygenase-l | 100.0 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 100.0 | |
| 2a2m_A | 258 | Hypothetical protein BT3146; putative TENA family | 100.0 | |
| 1wwm_A | 190 | Hypothetical protein TT2028; TENA/THI-4 family, pu | 100.0 | |
| 3oql_A | 262 | TENA homolog; transcriptional activator, structura | 100.0 | |
| 1rcw_A | 231 | CT610, CADD; iron, DI-iron, redox enzyme, metallo | 99.96 | |
| 3dde_A | 239 | TENA/THI-4 protein, domain of unknown function WI | 99.92 | |
| 3hlx_A | 258 | Pyrroloquinoline-quinone synthase; PQQC, PQQ biosy | 99.91 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.86 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.84 | |
| 3bjd_A | 332 | Putative 3-oxoacyl-(acyl-carrier-protein) synthas; | 99.81 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.73 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.72 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.71 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.69 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.62 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.56 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.53 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.53 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.38 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 99.36 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.27 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.2 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.11 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.1 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.08 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.07 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.05 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.03 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.02 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.0 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.98 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.98 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.98 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 98.97 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.97 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.97 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.94 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.94 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.92 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.9 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.88 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.88 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.88 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.87 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.86 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.86 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.86 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.85 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.85 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.84 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.82 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.81 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.81 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.79 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.79 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.79 | |
| 3b5o_A | 244 | CADD-like protein of unknown function; structural | 98.78 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.78 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.77 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 98.76 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.75 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.72 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.72 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 98.7 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.7 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.69 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.68 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.68 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.66 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.66 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.65 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.65 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.63 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.63 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.62 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.6 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.58 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.57 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 98.49 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 97.87 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.46 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.36 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 98.35 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 98.35 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 98.34 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 98.31 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 98.29 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.28 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.27 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.23 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.19 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.15 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.13 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 98.12 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.12 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.11 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.11 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.09 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.06 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.04 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.03 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 98.02 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.99 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 97.98 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 97.98 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.97 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.97 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.96 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.94 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.91 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.9 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.89 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.87 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.86 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.86 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.74 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.74 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.71 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.69 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 97.69 | |
| 2q32_A | 264 | Heme oxygenase 2, HO-2; structural genomics medica | 97.61 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 97.54 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 97.53 | |
| 1wov_A | 250 | Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: | 97.52 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.52 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.51 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 97.5 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 97.49 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 97.48 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.47 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 97.46 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 97.43 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 97.39 | |
| 1j02_A | 267 | Heme oxygenase 1; alpha helix, O2-analog bound for | 97.26 | |
| 1we1_A | 240 | Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A | 97.23 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.16 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 97.1 | |
| 1n45_A | 233 | Heme oxygenase 1, HO-1; alpha helices, heme-bindin | 97.1 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 97.09 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.06 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.99 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 96.99 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 96.98 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.98 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 96.98 | |
| 1wzd_A | 215 | Heme oxygenase; electron-transfer, artificial meta | 96.94 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 96.93 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 96.82 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 96.76 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.71 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 96.69 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.56 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.25 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.99 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.9 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.87 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.55 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.31 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.31 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 93.71 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 93.32 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 92.34 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 92.31 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 87.77 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 87.29 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 87.11 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 86.49 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 83.92 | |
| 1sk7_A | 198 | Hypothetical protein PA-HO; heme oxygenase, heme d | 80.79 |
| >3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-48 Score=385.26 Aligned_cols=222 Identities=19% Similarity=0.233 Sum_probs=202.3
Q ss_pred CcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008499 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (563)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (563)
..++|+++||++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++..+...+..+
T Consensus 18 ~~~~ft~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~far~~a~a~aka~~~~~~~~~~~~~~~~ 97 (248)
T 3no6_A 18 QGMTFSKELREASRPIIDDIYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEFM 97 (248)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred H-HHHHHHHHHHHHhCCCcc---cccCCChhHHHHHHHHHHHhcC-CCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 008499 92 L-EELKMHDSFVKEWGTDLA---KMATVNSATVKYTEFLLATASG-KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (563)
Q Consensus 92 ~-~E~~~h~~~~~~~gi~~~---~~~~~~p~~~~Y~~fl~~~a~~-~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (563)
. +|+++|++++++||++.+ +..+++|+|++|++||++++.. +. ++++++||+||+|+
T Consensus 98 ~~~E~~lh~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~ll~~a~~~g~------------------~~~~laAl~PC~w~ 159 (248)
T 3no6_A 98 LEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAFAREN------------------AAFTIAAMAPCPYV 159 (248)
T ss_dssp HTCCCHHHHHHHHHTTSCHHHHCCSCCCCHHHHHHHHHHHHHHHHCSS------------------THHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHHhcCCC------------------HHHHHHHHHHHHHH
Confidence 5 699999999999999976 3468899999999999999953 32 37899999999999
Q ss_pred HHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008499 167 YAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLA 246 (563)
Q Consensus 167 Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~ 246 (563)
|++||+++.....+ .++++|++||++|+ ++|.+.|.+++++||+++..++++++++|+++|+++|++|++|||++ ++
T Consensus 160 Y~eig~~l~~~~~~-~~~~~Y~~WI~~Y~-~ef~~~v~~~~~~ld~~~~~~s~~~~~~l~~~F~~a~~lE~~Fwd~a-y~ 236 (248)
T 3no6_A 160 YAVIGKRAMEDPKL-NKESVTSKWFQFYS-TEMDELVDVFDQLMDRLTKHCSETEKKEIKENFLQSTIHERHFFNMA-YI 236 (248)
T ss_dssp HHHHHHHHHHCTTC-CTTSTTHHHHHHHH-HHTHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHhcCCC-CCCchHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Confidence 99999999875432 25799999999999 99999999999999999999999999999999999999999999999 77
Q ss_pred CCccccccc
Q 008499 247 QPTVVPLIK 255 (563)
Q Consensus 247 ~~~~~p~~~ 255 (563)
+.+ ||+..
T Consensus 237 ~e~-W~~~~ 244 (248)
T 3no6_A 237 NEK-WEYGG 244 (248)
T ss_dssp TCC-CCCSS
T ss_pred hcc-CCCCC
Confidence 665 56533
|
| >3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-47 Score=373.10 Aligned_cols=211 Identities=25% Similarity=0.378 Sum_probs=197.3
Q ss_pred CCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 008499 10 SPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89 (563)
Q Consensus 10 ~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~ 89 (563)
.++.++|+++||++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++...+.
T Consensus 3 ~~p~g~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~ 82 (226)
T 3mvu_A 3 SEPYGKAFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTVN 82 (226)
T ss_dssp CSTTCHHHHHHHHHTTTHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHH-HHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 008499 90 GVLE-ELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMR 165 (563)
Q Consensus 90 ~i~~-E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~ 165 (563)
.+.+ |+++|+.+++++|++.++ ..+++|+|++|++||++++. ++ ++++++||+||+|
T Consensus 83 ~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a~~~~-------------------~~~~~aAl~pc~~ 143 (226)
T 3mvu_A 83 ALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYSGD-------------------LLDLLAALAPCVM 143 (226)
T ss_dssp HHHTTHHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHH
Confidence 8875 999999999999999863 57899999999999999996 54 4789999999999
Q ss_pred HHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHH-----Hhhc-cCCHHHHHHHHHHHHHHHHHHHHh
Q 008499 166 LYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD-----KLSV-SLTGEELDIIEKLYHQAMKLEVEF 239 (563)
Q Consensus 166 ~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld-----~~~~-~~~~~~~~~~~~~f~~~~~lE~~F 239 (563)
+|.+||+++.... ++|+|++||++|+|++|.+.|.++.+++| +++. .++++++++|+++|+++|++|++|
T Consensus 144 ~Y~~ig~~l~~~~----~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~F~~a~~lE~~F 219 (226)
T 3mvu_A 144 GYGEIGKRLTAEA----TSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGF 219 (226)
T ss_dssp HHHHHHHHHHHHC----SCSTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCTTGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC----CCCcchHHHHHcCCHHHHHHHHHHHHHHCchhHHHHhhhccChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998753 37899999999999999999999999999 9887 778999999999999999999999
Q ss_pred hccC
Q 008499 240 FCAQ 243 (563)
Q Consensus 240 w~~a 243 (563)
||++
T Consensus 220 wd~a 223 (226)
T 3mvu_A 220 WQMG 223 (226)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9998
|
| >3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=373.35 Aligned_cols=213 Identities=23% Similarity=0.394 Sum_probs=197.6
Q ss_pred CCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 008499 11 PEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90 (563)
Q Consensus 11 ~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~ 90 (563)
+-.|+|+++||++..+.|...++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++...+..
T Consensus 2 ~~~M~f~~~L~~~~~~~~~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~ 81 (221)
T 3ibx_A 2 PFTMQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQD 81 (221)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HH-HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 008499 91 VL-EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (563)
Q Consensus 91 i~-~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (563)
+. +|+++|+.+++++|++.++ ..+++|+|++|++||++++. |+ ++++++||+||+|+
T Consensus 82 ~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a~~~~-------------------~~~~~aAl~pc~~~ 142 (221)
T 3ibx_A 82 ILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGS-------------------IKEVAAAVLSCGWS 142 (221)
T ss_dssp HHSCTTSHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHhhccCCHHHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHH
Confidence 75 6999999999999999763 57899999999999999996 44 47899999999999
Q ss_pred HHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 167 YAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 167 Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
|.+||+++.+..+ ..++|+|++||++|+|++|.+.|.+++++||+++..++++++++|+++|+++|++|++|||++
T Consensus 143 Y~~ig~~l~~~~~-~~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~F~~a~~lE~~Fwd~a 218 (221)
T 3ibx_A 143 YLVIAQNLSQIPN-ALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSKQEIEKLKEIFITTSEYEYLFWDMA 218 (221)
T ss_dssp HHHHHHHHTCSSS-TTTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999986532 135799999999999999999999999999999998999999999999999999999999998
|
| >4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=373.62 Aligned_cols=219 Identities=22% Similarity=0.313 Sum_probs=200.3
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL- 92 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~- 92 (563)
|+|+++||++..+.|...++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++...+..+.
T Consensus 1 M~ft~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~~~~ 80 (229)
T 4fn6_A 1 MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVE 80 (229)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSHHHHHHHHTCCCHHHHHHHHHHHHHTHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHS
T ss_pred CcHHHHHHHhHHHHHHHHHCChHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999988875
Q ss_pred HHHHHHHHHHHHhCCCcc---cccCCChhHHHHHHHHHHHhcC-CCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 008499 93 EELKMHDSFVKEWGTDLA---KMATVNSATVKYTEFLLATASG-KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (563)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~---~~~~~~p~~~~Y~~fl~~~a~~-~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (563)
+|+++|+.+++.+|++.+ ...+++|+|.+|++||++++.. +. ++++++||+||+|+|+
T Consensus 81 ~E~~~h~~~~~~~gi~~~~~~~~~~~~p~~~aY~~~l~~~a~~~~~------------------~~~~~aAl~pC~~~Y~ 142 (229)
T 4fn6_A 81 GEVLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSREN------------------AIYTIAAMAPCPYIYA 142 (229)
T ss_dssp CCCHHHHHHHHHHTSCHHHHHHSCCCCHHHHHHHHHHHHHHHHCCS------------------HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHHhhcCC------------------HHHHHHHHHHHHHHHH
Confidence 699999999999999976 3468999999999999999853 32 4799999999999999
Q ss_pred HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008499 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQP 248 (563)
Q Consensus 169 ~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~~~ 248 (563)
+||+++.....+ .++|+|++||++|+ ++|.+.|.++++++|+++..++++++++|+++|+++|++|++|||++ +++.
T Consensus 143 ~ig~~l~~~~~~-~~~~~y~~WI~~y~-~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~F~~a~~lE~~Fwd~a-~~~~ 219 (229)
T 4fn6_A 143 ELAKRSQSDHKL-NREKDTAKWFDFYS-TEMDDIINVFESLMNKLAESMSDKELEQVKQVFLESCIHERRFFNMA-MTLE 219 (229)
T ss_dssp HHHHHHHTCTTC-CTTSTHHHHHHHHT-TTTHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHcCCC-CCCChHHHHHHHHh-HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hhcc
Confidence 999999875431 25789999999999 99999999999999999999999999999999999999999999999 7766
Q ss_pred cccccc
Q 008499 249 TVVPLI 254 (563)
Q Consensus 249 ~~~p~~ 254 (563)
+ ||+.
T Consensus 220 ~-w~~~ 224 (229)
T 4fn6_A 220 Q-WEFG 224 (229)
T ss_dssp C-CCCC
T ss_pred C-CCCC
Confidence 5 5653
|
| >2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=365.20 Aligned_cols=218 Identities=17% Similarity=0.258 Sum_probs=200.0
Q ss_pred cchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 008499 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL 92 (563)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~ 92 (563)
-++|+++||+...+.|..+++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++++++.++...+..+.
T Consensus 27 mm~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~YL~QDy~yL~~f~r~la~a~aka~~~~~~~~l~~~i~~~~ 106 (263)
T 2qcx_A 27 GMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTY 106 (263)
T ss_dssp CSSHHHHHHHHTHHHHHHHHTCHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred -HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 93 -EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 93 -~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
+|+++|+.+++++|++.++ ..+++|+|++|++||++++..+. ++++++||+||+|+|.+
T Consensus 107 ~~E~~lh~~~~~~~Gi~~~~l~~~~~~pat~aYt~~l~~~a~~g~------------------~~~~laAl~pC~w~Y~~ 168 (263)
T 2qcx_A 107 EAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSVLSGN------------------FAEILAALLPCYWLYYE 168 (263)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHSCCCCHHHHHHHHHHHHHHTTTC------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCC------------------HHHHHHHHHHHHHHHHH
Confidence 5999999999999999763 67899999999999999996332 47999999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCc
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPT 249 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~~~~ 249 (563)
||+++..... ++++|++||++|++++|.+.|.+++++||+++..++++++++|+++|+++|++|++|||++ +++.+
T Consensus 169 ig~~l~~~~~---~~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~~~~s~~~~~~l~~~F~~a~~lE~~Fwd~a-~~~e~ 244 (263)
T 2qcx_A 169 VGEKLLHCDP---GHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGMA-YRKEG 244 (263)
T ss_dssp HHHHHTTCCC---CSHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred HHHHHHhccC---CCcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 9999876432 4599999999999999999999999999999988899999999999999999999999999 65554
Q ss_pred cccc
Q 008499 250 VVPL 253 (563)
Q Consensus 250 ~~p~ 253 (563)
||+
T Consensus 245 -W~~ 247 (263)
T 2qcx_A 245 -WSD 247 (263)
T ss_dssp -SCC
T ss_pred -CCC
Confidence 665
|
| >1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=358.12 Aligned_cols=216 Identities=18% Similarity=0.196 Sum_probs=195.3
Q ss_pred CCCCCCCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHH
Q 008499 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKL 82 (563)
Q Consensus 3 ~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~ 82 (563)
+|.|...+-++++|+++||+...+.|...++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.
T Consensus 3 ~~~~~~~~~~p~~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~ 82 (225)
T 1z72_A 3 AMETQDYAFQPGLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKL 82 (225)
T ss_dssp ----CCCSSCCHHHHHHHHHTTHHHHHHHHTCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred ccccCCCCCCChhHHHHHHHHhHHHHHHHHCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 57777777778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHH
Q 008499 83 SISELRKGVL-EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLG 158 (563)
Q Consensus 83 ~l~~~~~~i~-~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~ 158 (563)
++...+..+. +|+.+|+.++++||++.++ ..+++|+|++|++||++++. |+ ++++++
T Consensus 83 ~~~~~~~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~-------------------~~~~~a 143 (225)
T 1z72_A 83 RFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSD-------------------YAHLLV 143 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHHHHTC-------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhcCCCHHHHHHHHHHHHHHccCC-------------------HHHHHH
Confidence 9999888865 6999999999999999763 57899999999999999986 54 478999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Q 008499 159 AMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVE 238 (563)
Q Consensus 159 Al~pC~~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~ 238 (563)
||+||+|+|.+||++ ... .+++++|++||++|+|++|.+.|.++++++|+++.. +++++ +|+++|+++|++|++
T Consensus 144 Al~pc~~~Y~~i~~~-~~~---~~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~~~~-~~~~~-~~~~~f~~a~~lE~~ 217 (225)
T 1z72_A 144 MLVIAEGLYLDWGSK-DLA---LPEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGKN-REDLT-ELQQRWNQAVALELA 217 (225)
T ss_dssp HHHHHHHHHHHHHTC-SSC---CCSSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC--CCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hcc---CCCcchHHHHHHHhCCHHHHHHHHHHHHHHHHHHcC-CHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999998 432 235689999999999999999999999999999987 77888 999999999999999
Q ss_pred hhccC
Q 008499 239 FFCAQ 243 (563)
Q Consensus 239 Fw~~a 243 (563)
|||++
T Consensus 218 Fwd~a 222 (225)
T 1z72_A 218 FFDIG 222 (225)
T ss_dssp HTTTT
T ss_pred HHHHh
Confidence 99998
|
| >1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-44 Score=349.84 Aligned_cols=207 Identities=21% Similarity=0.254 Sum_probs=189.3
Q ss_pred HHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHH---HHHHHHHHHHHH
Q 008499 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDA---KLSISELRKGVL 92 (563)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~---~~~l~~~~~~i~ 92 (563)
|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.++ +.++...+..+
T Consensus 2 f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~l~~~~~~i- 80 (220)
T 1rtw_A 2 FSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPFFAESIYYISKEL- 80 (220)
T ss_dssp HHHHHHHHSHHHHGGGTTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHH-
T ss_pred hHHHHHHcCHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHH-
Confidence 78999999999999999999999999999999999999999999999999999999999999998 99999988887
Q ss_pred HHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 008499 93 EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLG 171 (563)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig 171 (563)
|+.+|+ ++++|++. ..+++|+|++|++||++++. |+ ++++++||+||+|+|.+||
T Consensus 81 -E~~lh~--~~~~Gi~~--~~~~~p~t~aY~~~l~~~a~~~~-------------------~~~~laAl~pc~~~Y~~i~ 136 (220)
T 1rtw_A 81 -EMFEKK--AQELGISL--NGEIDWRAKSYVNYLLSVASLGS-------------------FLEGFTALYCEEKAYYEAW 136 (220)
T ss_dssp -HHHHHH--HHHTTCCS--SSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHH--HHHCCCCC--CCCCCHHHHHHHHHHHHHHccCC-------------------HHHHHHHHHHHHHHHHHHH
Confidence 999999 89999998 57899999999999999986 54 4789999999999999999
Q ss_pred HHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCccc
Q 008499 172 KEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVV 251 (563)
Q Consensus 172 ~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~~~~~~ 251 (563)
+++.+... ++++|++||++|+|++|.+.|.++++++|+++...+++++++|+++|+++|++|++|||++ ++..+|+
T Consensus 137 ~~l~~~~~---~~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~f~~a~~lE~~Fwd~a-~~~~~w~ 212 (220)
T 1rtw_A 137 KWVRENLK---ERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVFKEVSKFELIFWDIA-YGGEGNV 212 (220)
T ss_dssp HHHHHHCS---SCCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHT-C------
T ss_pred HHHHhccC---CCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHH
Confidence 99987542 3589999999999999999999999999999988899999999999999999999999999 6665544
|
| >2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=354.06 Aligned_cols=208 Identities=17% Similarity=0.205 Sum_probs=191.6
Q ss_pred cchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHH----HHHHHHHH
Q 008499 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDA----KLSISELR 88 (563)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~----~~~l~~~~ 88 (563)
+++|+++||+...+.|..+++||||++|++||||.+.|++||+||++||.+|+|+++++++|+++.++ +.++...+
T Consensus 3 ~~~f~~~L~~~~~~~~~~~~~HpFv~~l~~GtL~~~~f~~yL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~~l~~~~ 82 (221)
T 2f2g_A 3 KRGVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEVVLGGI 82 (221)
T ss_dssp --CHHHHHHHHTHHHHHHHTSCSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTHHHHHHHHH
T ss_pred CCcHHHHHHHhCHHHHHHHHCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999888 88998888
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHH-hcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 008499 89 KGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLAT-ASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY 167 (563)
Q Consensus 89 ~~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~-a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y 167 (563)
..+.+|+++|+.+++++|++. ...+++|+|++|++||+++ +..+. ++++++||+||+|+|
T Consensus 83 ~~~~~E~~~h~~~~~~~Gi~~-~~~~~~p~~~aY~~~l~~~~~~~~~------------------~~~~~aAl~pc~~~Y 143 (221)
T 2f2g_A 83 ASLNDEIEWFKREGSKWDVDF-STVVPQRANQEYGRFLEDLMSSEVK------------------YPVIMTAFWAIEAVY 143 (221)
T ss_dssp HHHHHHHHHHHHHHHHTTCCG-GGCCCCHHHHHHHHHHHHTTSTTSC------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCh-hhcCCCHHHHHHHHHHHHhhccCCC------------------HHHHHHHHHHHHHHH
Confidence 887779999999999999997 4578999999999999999 75322 479999999999999
Q ss_pred HHHHHHHHh--hccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 168 AFLGKEFHA--LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 168 ~~ig~~~~~--~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
.+||+++.+ ..+ + ++|++||++|+|++|.+.|.++++++|+++...+++++++++++|+++|++|++|||++
T Consensus 144 ~~i~~~l~~~~~~~---~-~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~f~~a~~lE~~Fwd~a 217 (221)
T 2f2g_A 144 QESFAHCLEDGNKT---P-VELTGACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLELEVAFWEMS 217 (221)
T ss_dssp HHHTTTHHHHHHTS---S-SCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCCC---C-cHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999876 432 2 48999999999999999999999999999988899999999999999999999999999
|
| >2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=348.44 Aligned_cols=207 Identities=26% Similarity=0.385 Sum_probs=189.6
Q ss_pred CcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-
Q 008499 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG- 90 (563)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~- 90 (563)
..-+.++.||+...+.|...++||||++|++||||.++|++||+||++||.+|+|+++++++|+++++++.++...+.+
T Consensus 7 ~~~~~~~~l~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~l~~~~~~~ 86 (221)
T 2gm8_A 7 HHHGVTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGT 86 (221)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 3558899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 008499 91 VLEELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY 167 (563)
Q Consensus 91 i~~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y 167 (563)
+.+|+++|+.++++||++.++ ..+++|+|.+|++||++++. |+ ++++++||+||+|+|
T Consensus 87 i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~-------------------~~~~laAl~pc~~~Y 147 (221)
T 2gm8_A 87 VTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEG-------------------FYQCMAALLPCFWSY 147 (221)
T ss_dssp HHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCC-------------------HHHHHHHHHhHHHHH
Confidence 556999999999999999763 57899999999999999986 54 478999999999999
Q ss_pred HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 168 AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 168 ~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
.+||+++.+.... .++++|++||++|+|++|.+.|..+++++|++ ++++++|+++|+++|++|++|||++
T Consensus 148 ~~ig~~l~~~~~~-~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~~~~~~f~~a~~lE~~Fwd~a 217 (221)
T 2gm8_A 148 AEIAERHGGKLRE-NPVHVYKKWASVYLSPEYRGLVERLRAVLDSS-----GLSAEELWPYFKEASLYELEFWQAA 217 (221)
T ss_dssp HHHHHHHGGGGGG-CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCC-CCCchHHHHHHHhCCHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999765321 14589999999999999999999999999997 4577899999999999999999998
|
| >1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=350.09 Aligned_cols=209 Identities=23% Similarity=0.340 Sum_probs=190.0
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HH
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG-VL 92 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~-i~ 92 (563)
++|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+ +++++.++...+.. +.
T Consensus 3 M~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka-~~~~~~~l~~~~~~~i~ 81 (226)
T 1udd_A 3 VMITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKA-EYPLMAELIELARDEVT 81 (226)
T ss_dssp CCHHHHHHHTTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999 99999999988887 56
Q ss_pred HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 93 EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
+|+++|+.+++++|++.++ ..+++|+|++|++||++++. |+ ++++++||+||+|+|.+
T Consensus 82 ~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~-------------------~~~~laAl~pc~~~Y~~ 142 (226)
T 1udd_A 82 VEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGN-------------------IIEGLTALLPCFWSYAE 142 (226)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHH
Confidence 7999999999999999763 57899999999999999986 54 47899999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCH-HHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTG-EELDIIEKLYHQAMKLEVEFFCAQPLAQP 248 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~-~~~~~~~~~f~~~~~lE~~Fw~~a~~~~~ 248 (563)
||+++.+.... .++++|++||++|+|++|.+.|..+++++|++ + +++++++++|+++|++|++|||++ +++.
T Consensus 143 ig~~l~~~~~~-~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~~~~~~~f~~a~~lE~~Fwd~a-~~~~ 215 (226)
T 1udd_A 143 IAEYHKDKLRD-NPIKIYREWGKVYLSNEYLNLVGRLRKIIDSS-----GHSGYDRLRRIFITGSKFELAFWEMA-WRGG 215 (226)
T ss_dssp HHHHTHHHHTT-CSCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS-----CSSCHHHHHHHHHHHHHHHHHHHHHH-HHTC
T ss_pred HHHHHHhccCC-CCCchHHHHHHHhCCHHHHHHHHHHHHHHHhC-----chhHHHHHHHHHHHHHHHHHHHHHHh-hccc
Confidence 99999865321 14589999999999999999999999999997 3 577899999999999999999999 6555
Q ss_pred c
Q 008499 249 T 249 (563)
Q Consensus 249 ~ 249 (563)
+
T Consensus 216 ~ 216 (226)
T 1udd_A 216 D 216 (226)
T ss_dssp -
T ss_pred h
Confidence 5
|
| >2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=348.82 Aligned_cols=205 Identities=21% Similarity=0.234 Sum_probs=186.9
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HH
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG-VL 92 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~-i~ 92 (563)
++|+++||+...+.|...++||||++|++||||.++|++||+||++||.+|+|+++++++|+ +.+++.++...+.. +.
T Consensus 5 M~f~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~Yl~QDy~yl~~f~r~~a~~~~ka-~~~~~~~~~~~~~~~i~ 83 (214)
T 2qzc_A 5 VGNVENLINGVGELWNKYVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKG-PIDKVTKILNLVFSSRD 83 (214)
T ss_dssp CHHHHHHHHHTTTHHHHHHTCHHHHHHHTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHTCC--
T ss_pred cHHHHHHHHhhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999 99999999999887 56
Q ss_pred HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 008499 93 EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFL 170 (563)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i 170 (563)
+|+++|+.+++++|++.++ ..+++|+|++|++||++++.. . ++++++||+||+|+|.+|
T Consensus 84 ~E~~~h~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~-~------------------~~~~~aAl~pc~~~Y~~i 144 (214)
T 2qzc_A 84 KGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYANL-D------------------WNKFLVAWTPCMFGYSIV 144 (214)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHH-C------------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhc-C------------------HHHHHHHHHHHHHHHHHH
Confidence 7999999999999999763 578999999999999999854 3 479999999999999999
Q ss_pred HHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCc
Q 008499 171 GKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPT 249 (563)
Q Consensus 171 g~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~~~~ 249 (563)
|+++.+. ++|+|++||++|+|++|.+.|.++++++|++ +++++ ++++|+++|++|++|||+++...||
T Consensus 145 g~~l~~~-----~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~-~~~~f~~a~~~E~~Fwd~a~~~~~~ 212 (214)
T 2qzc_A 145 GDYVIDS-----PNEVYKTWASFYASTEYKKRIEAILYALDEV-----SITED-LLNIFINSVRFEIGFWDASLRKDPT 212 (214)
T ss_dssp HHHHTTC-----SCHHHHHHHHHHHSHHHHHHHHHHHHHHTTS-----CCCHH-HHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhC-----CCChHHHHHHHhCCHHHHHHHHHHHHHHHhC-----ccHHH-HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9998753 3589999999999999999999999999997 45677 9999999999999999999545554
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=389.13 Aligned_cols=215 Identities=20% Similarity=0.317 Sum_probs=197.0
Q ss_pred CCcchHHHHHHH--HhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 008499 11 PEEEGLARRLWI--KFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELR 88 (563)
Q Consensus 11 ~~~~~~~~~lw~--~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~ 88 (563)
.+.++|+++||+ +..+.|..+++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++.+++..+...+
T Consensus 327 ~~~~~f~~~L~~~~~~~~~w~~~~~HpFv~~L~~GtL~~~~F~~YL~QD~~yL~~far~~a~a~aka~~~~~~~~~~~~~ 406 (550)
T 3rm5_A 327 IPGGNFYEYLINHPKVKPHWDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVIV 406 (550)
T ss_dssp CCSSCHHHHHHHSTTTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHH
T ss_pred CCCchHHHHHHhCchhhHHHHHHhCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 357799999999 889999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHH-HHHHhCC-Ccc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHH
Q 008499 89 KGVLEELKMHDS-FVKEWGT-DLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPC 163 (563)
Q Consensus 89 ~~i~~E~~~h~~-~~~~~gi-~~~--~~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC 163 (563)
..+.+|+++|+. ++++||+ +.+ +..+++|+|++|++||+++++ ++ ++++++||+||
T Consensus 407 ~~i~~E~~~h~~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~l~~~a~~g~-------------------~~~~~aAl~pC 467 (550)
T 3rm5_A 407 GGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRRGN-------------------WQELVASLTPC 467 (550)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCCTTTTTSCCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHhhcCCCHHHHHHHHHHHHHHccCC-------------------HHHHHHHHHHH
Confidence 888899999999 6669999 654 356889999999999999996 54 47899999999
Q ss_pred HHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 164 MRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 164 ~~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
+|+|.+||+++..... ..++|+|++||++|+|++|.+.|.++++++|++++.++++++++|+++|+++|+||++||||+
T Consensus 468 ~~~Y~~ig~~l~~~~~-~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~l~~~F~~a~~lE~~Fwd~a 546 (550)
T 3rm5_A 468 LMGYGEALTKMKGKVT-APEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPPEQLDTLVTIYAEVCELETNFWTAA 546 (550)
T ss_dssp HHHHHHHHHTTTTCCC-SCTTSHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC-CCCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999875432 235789999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 008499 244 PLA 246 (563)
Q Consensus 244 ~~~ 246 (563)
++
T Consensus 547 -~~ 548 (550)
T 3rm5_A 547 -LE 548 (550)
T ss_dssp -HT
T ss_pred -hh
Confidence 54
|
| >2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=346.88 Aligned_cols=208 Identities=18% Similarity=0.316 Sum_probs=187.1
Q ss_pred CCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 008499 10 SPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89 (563)
Q Consensus 10 ~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~ 89 (563)
+.++++|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++ +++..+...+.
T Consensus 44 ~~~~~~f~~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QDy~yL~~far~~a~a~aka~~-~~~~~~~~~~~ 122 (258)
T 2a2m_A 44 VPAADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQD-ETLREFFKAKA 122 (258)
T ss_dssp CCCTTSHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-HHHHHHHHHHH
T ss_pred CCCCchHHHHHHHhhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHH
Confidence 44458999999999999999999999999999999999999999999999999999999999999999 88888888887
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 008499 90 GVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (563)
Q Consensus 90 ~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (563)
.+.+ ++|++++++|||+.++..+++|+|++|++||++++. |++ +++++||+||+|+|.
T Consensus 123 ~~~~--~lh~~~~~~~Gi~~~~~~~~~pat~aYt~~ll~~a~~g~~-------------------~~~laAl~pC~~~Y~ 181 (258)
T 2a2m_A 123 KSYD--EYNETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLAS-------------------PYMCVVMLPCEYLWP 181 (258)
T ss_dssp HHHH--HHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHHHHSCT-------------------HHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHcCCCHHHccCCCHHHHHHHHHHHHHHhcCCH-------------------HHHHHHHHHHHHHHH
Confidence 7766 999999999999977557889999999999999985 553 789999999999999
Q ss_pred HHHHHHHhhccCCCCccccccccc-ccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 008499 169 FLGKEFHALLNANEGNHPYTKWID-NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQ 247 (563)
Q Consensus 169 ~ig~~~~~~~~~~~~~~~y~~Wi~-~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~~ 247 (563)
+||+++.+... ++++|++||+ +|+|+ +.|.+++++||+++...+ +++|+++|+++|++|++|||++ +..
T Consensus 182 eig~~l~~~~~---~~~~Y~~WI~~~Y~~~---~~v~~~~~lld~~~~~~~---~~~l~~~F~~a~~lE~~Fwd~a-~~~ 251 (258)
T 2a2m_A 182 WIANFLDGYTP---TNSLYRFWIEWNGGTP---NGAYQMGNMLEQYRDKID---EDKAVEIFNTAMNYELKVFTSS-TIL 251 (258)
T ss_dssp HHHHHHGGGSC---TTSTTHHHHHHHCSCC---HHHHHHHHHHHTTGGGSC---HHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHhccC---CCchHHHHHHhccCCH---HHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHh-hhh
Confidence 99999976532 3599999999 99998 889999999999986655 6789999999999999999999 554
Q ss_pred Cc
Q 008499 248 PT 249 (563)
Q Consensus 248 ~~ 249 (563)
.+
T Consensus 252 ~~ 253 (258)
T 2a2m_A 252 TT 253 (258)
T ss_dssp C-
T ss_pred cc
Confidence 44
|
| >1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-41 Score=320.69 Aligned_cols=188 Identities=17% Similarity=0.127 Sum_probs=166.1
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~ 93 (563)
+.++++||+...+.|...++||| |||.++|++||+||++||.+|+|+++++++|+++.+ +..+...++.+.+
T Consensus 2 ~~~~~~L~~~~~~~w~~~~~HpF-------tL~~~~f~~Yl~QD~~yL~~f~r~~a~~~~ka~~~~-~~~~~~~~~~~~~ 73 (190)
T 1wwm_A 2 GMLGLDLLKEVPGLLEEIKALPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAH-RAPLVQALMATVE 73 (190)
T ss_dssp ---------CCSSHHHHHHHCCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHH
T ss_pred chHHHHHHHhHHHHHHHHHCCCC-------CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHH
Confidence 35889999999999999999999 999999999999999999999999999999999999 9999999888866
Q ss_pred HHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 008499 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKE 173 (563)
Q Consensus 94 E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~ 173 (563)
| +++++++||+. ..+++|+|++|++||++++.|+ ++++++||+||+|+|.+||++
T Consensus 74 E----~~~~~~~gi~~--~~~~~p~~~aY~~~l~~~a~~~-------------------~~~~~aAl~pc~~~Y~~ig~~ 128 (190)
T 1wwm_A 74 E----LDWLLLQGASP--SAPVHPVRAGYIALLEEMGRLP-------------------YAYRVVFFYFLNGLFLEAWAH 128 (190)
T ss_dssp H----HHHHHTTTCCS--SSCCCHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred H----HHHHHHcCCCC--CCCCCHHHHHHHHHHHHHcCCC-------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 7 67899999997 4789999999999999998733 479999999999999999999
Q ss_pred HHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 174 FHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 174 ~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
+.+ ++|+|++||++|+|++|.+.|.++++++|+++...++++ |+++|+++|++|++|||++
T Consensus 129 l~~------~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~---~~~~F~~a~~lE~~Fwd~a 189 (190)
T 1wwm_A 129 HVP------EEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEV---VRTYLRRILEAEKATWSLL 189 (190)
T ss_dssp HSC------SSSHHHHHHHHHSCTTHHHHHHHHHHHHHHHHTTSCHHH---HHHHHHHHHHHHHHHHHTT
T ss_pred hcc------CCcHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHHHHHhh
Confidence 864 358999999999999999999999999999998877766 9999999999999999998
|
| >3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=288.24 Aligned_cols=215 Identities=10% Similarity=0.101 Sum_probs=183.3
Q ss_pred CCCCCCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCH-----
Q 008499 4 IPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDD----- 78 (563)
Q Consensus 4 ~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~----- 78 (563)
.++..++++.++|+++||+...+.|....+||||++|++||||.++|++||+||++||.+|+|+++++++|+++.
T Consensus 9 ~~~~~~~~~~p~~se~L~~~~~~iw~~i~~HPFv~~L~dGtL~~e~Fr~Yl~QDy~YL~~far~~Al~~aKa~~~~~~~~ 88 (262)
T 3oql_A 9 TGPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGE 88 (262)
T ss_dssp CSCTTCGGGSCHHHHHHHHHHHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCHHH
T ss_pred CCccccccCCcHHHHHHHHHhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCccccCCCh
Confidence 467788899999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred -HHHHHHHHHHHHHHHHH---HHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhh
Q 008499 79 -DAKLSISELRKGVLEEL---KMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTK 151 (563)
Q Consensus 79 -~~~~~l~~~~~~i~~E~---~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~ 151 (563)
+.+.++ ..++..|+ ++|+.+++.|||+.++ ..+++|+|.+|++||++++. |+
T Consensus 89 ~~~~~~l---~~~i~vE~~H~~~~~~f~~~~Gis~eel~~~~~~P~~~aYt~~ml~~a~~g~------------------ 147 (262)
T 3oql_A 89 DMARRWL---MRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDS------------------ 147 (262)
T ss_dssp HHHHHHH---HHHHHHTTTHHHHHHHHHHTTTCCHHHHHHTCSCGGGGHHHHHHHHHHHHSC------------------
T ss_pred HHHHHHH---HHHHHHHHhhHHHHHHHHHHcCCCHHHHhcCCCChHHHHHHHHHHHHHccCC------------------
Confidence 334443 34555555 3445789999999873 67899999999999999986 54
Q ss_pred hhHHHHHHHHHHHHHHHHHHH---------HHHhhccCCCCcccccccccccCChhHHHH-HHHHHHHHHHhhccC-CHH
Q 008499 152 VAAYTLGAMSPCMRLYAFLGK---------EFHALLNANEGNHPYTKWIDNYSSESFQAS-ALQNEDLLDKLSVSL-TGE 220 (563)
Q Consensus 152 ~~a~~l~Al~pC~~~Y~~ig~---------~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~-v~~l~~~ld~~~~~~-~~~ 220 (563)
++++++|++ +|+|.+||+ .+....+ ...++.|.+||+.|+ +|... +.+..+++|+++... +++
T Consensus 148 -l~e~lAAl~--ya~e~~ig~~s~~~~~g~~~~~~~~-~~~~~~~~~w~~~h~--~~D~~H~~e~~~li~~l~~~~~~~~ 221 (262)
T 3oql_A 148 -LAVAMAATN--YAIEGATGEWSAVVCSTGVYAEAFA-EETRKKSMKWLKMHA--QYDDAHPWEALEIICTLVGNKPSLQ 221 (262)
T ss_dssp -HHHHHHHTT--THHHHHHHHHHHHHHSSSHHHHTSC-HHHHHHHHHHHHHHH--TCC-CHHHHHHHHHHHHHCSSCCHH
T ss_pred -HHHHHHHHH--HHHHHHhhhHHHHhhhhHHHhcCCC-cccChHHHHHHHHHH--HHHHHhHHHHHHHHHHHhccCCCHH
Confidence 478999998 999999999 6655332 112567999999998 67666 999999999999877 899
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCC
Q 008499 221 ELDIIEKLYHQAMKLEVEFFCAQPL 245 (563)
Q Consensus 221 ~~~~~~~~f~~~~~lE~~Fw~~a~~ 245 (563)
++++|+++|++++.+|+.|||+++.
T Consensus 222 e~~~~~~a~~~S~~~~~~fld~~y~ 246 (262)
T 3oql_A 222 LQAELRQAVTKSYDYMYLFLERCIQ 246 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999933
|
| >1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=239.89 Aligned_cols=201 Identities=14% Similarity=0.151 Sum_probs=165.1
Q ss_pred cchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-
Q 008499 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV- 91 (563)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i- 91 (563)
+++|+++||+... +...++|||+++|.+|+||.+.|++||.||++|+..|.++++.+++++++++.+..+...+...
T Consensus 5 ~m~f~~~L~~~~~--~~~~~~HPf~~~l~~G~L~~e~~~~yl~qdy~yl~~f~~~~a~~~~~~~~~~~~~~~~~~i~~e~ 82 (231)
T 1rcw_A 5 FMNFLDQLDLIIQ--NKHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEE 82 (231)
T ss_dssp --CHHHHHHHHHH--HTCGGGSHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HhhcccCHHHHHHhCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc
Confidence 3679999999886 5556899999999999999999999999999999999999999999999999888776554433
Q ss_pred ---HHHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 008499 92 ---LEELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (563)
Q Consensus 92 ---~~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (563)
..|.++|.++++.+|++.++ ..++.|+|++|++||+.++..+. ++++++|+++.+++
T Consensus 83 ~~~~~h~~l~~~~~~~~Gi~~~~~~~~~~~p~t~~y~~~~~~~~~~~~------------------~~~~laal~~~E~~ 144 (231)
T 1rcw_A 83 NGYPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWCTGDS------------------LAAGVAALYSYESQ 144 (231)
T ss_dssp SSSSCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHTSSC------------------HHHHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHHcCCC------------------HHHHHHHHHHHHHH
Confidence 23699999999999999763 56789999999999999986332 36788886554555
Q ss_pred HHHHHHHHHhhccCCCCcccccccccccCChhH-------HHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHh
Q 008499 167 YAFLGKEFHALLNANEGNHPYTKWIDNYSSESF-------QASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEF 239 (563)
Q Consensus 167 Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f-------~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~F 239 (563)
+..+.+.... ..++|.+||+.|+++.| .+.+..+.+++|+++. ++++++.++|.+++++|++|
T Consensus 145 ~~~~~~~~~~------~~~~~~~wi~~~~~~~f~~h~~~d~~h~~~~~~~l~~~~~----~~~~~~~~~~~~~~~le~~f 214 (231)
T 1rcw_A 145 IPRIAREKIR------GLTEYFGFSNPEDYAYFTEHEEADVRHAREEKALIEMLLK----DDADKVLEASQEVTQSLYGF 214 (231)
T ss_dssp HHHHHHHHHH------HHHHHSCCCSGGGGHHHHHHHHHHHHHHHHHHHHHHHHCS----SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH------HHHHHCCCCChhhhHHHHHHHHHhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 5555443322 12345589999999999 6788999999999974 57789999999999999999
Q ss_pred hccC
Q 008499 240 FCAQ 243 (563)
Q Consensus 240 w~~a 243 (563)
||++
T Consensus 215 wd~~ 218 (231)
T 1rcw_A 215 LDSF 218 (231)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9999
|
| >3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-25 Score=219.72 Aligned_cols=200 Identities=15% Similarity=0.101 Sum_probs=168.7
Q ss_pred HHHHHHhHHhHHHhhcC-HHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHH-H
Q 008499 18 RRLWIKFKRESVFAMYS-PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDD--AKLSISELRKGVL-E 93 (563)
Q Consensus 18 ~~lw~~~~~~~~~~~~h-PFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~--~~~~l~~~~~~i~-~ 93 (563)
++||++..+.|...++| |||++|.+||||.+.|++||.|||+||.+|+|+++.+++++++.+ .+..+...+.... .
T Consensus 8 ~~L~~~~~~~w~~~~~h~pFv~~l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~~~~~~~~~~~~~~~~e~~~ 87 (239)
T 3dde_A 8 TKLEQKVATMWDSILTNSPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKYLSFCFHHAHEEAGH 87 (239)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHCh
Confidence 89999999999999999 999999999999999999999999999999999999999999987 7777776665543 4
Q ss_pred HHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 008499 94 ELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFL 170 (563)
Q Consensus 94 E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i 170 (563)
|..+++. ++.+|++.++ ..+|+|+|.+|++||+.++. +++ +.+++++++|+|+| .+
T Consensus 88 e~~~~~~-l~~~G~~~~~~~~~~~~pat~aY~~~l~~~a~~~~~-------------------~~~la~~~~~E~~y-~~ 146 (239)
T 3dde_A 88 ELMALSD-IASIGFDREDVLSSKPLPATETLIAYLYWISATGNP-------------------VQRLGYSYWAENVY-GY 146 (239)
T ss_dssp HHHHHHH-HHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHHSSCG-------------------GGGHHHHHHHHTCH-HH
T ss_pred HHHHHHH-HHHhCCCHHHHHhCCCChHHHHHHHHHHHHHhCCCH-------------------HHHHHHHHHHHHhh-HH
Confidence 6565666 8899999763 56889999999999999985 443 57899999999999 78
Q ss_pred HHHHHhh----ccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008499 171 GKEFHAL----LNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQP 244 (563)
Q Consensus 171 g~~~~~~----~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~ 244 (563)
|..+.+. .+ .+. ....|+..++..+- ..+..++++||+++ .++++++++.+..+.++++..+||++..
T Consensus 147 ~~~~~~~l~~~~~--l~~-~~~~f~~~h~~~d~-~h~~~~~~~ld~~~--~~~~~~~~ii~~a~~~~~l~~~~f~~l~ 218 (239)
T 3dde_A 147 IDPVLKAIQSTLD--LTP-QSMKFFIAHSKIDA-KHAEEVNEMLHEVC--KTQEDVDSVVAVMENSLVLTARILDDVW 218 (239)
T ss_dssp HHHHHHHHHHHTT--CCG-GGGHHHHHHHHHHH-HHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--cCH-HHHHHHHHHHhcch-hHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7755432 22 122 25789999887654 55678999999986 5899999999999999999999999873
|
| >3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} SCOP: a.132.1.4 PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=208.93 Aligned_cols=204 Identities=10% Similarity=0.029 Sum_probs=164.9
Q ss_pred CCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 008499 11 PEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90 (563)
Q Consensus 11 ~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~ 90 (563)
-..+.|+++||+...+-+ .+|||+++|.+|+|+++.|++|++||++|+.+|++.++.+++|++|.+.++.+.+.+..
T Consensus 7 ~~~~~F~~~Lr~~~~~~~---~~HPF~~~l~~G~L~~e~~r~yv~qdy~Yl~~f~r~~A~i~ak~~d~e~rr~l~~ni~~ 83 (258)
T 3hlx_A 7 LSPQAFEEALRAKGDFYH---IHHPYHIAMHNGNATREQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRRKWVQRILD 83 (258)
T ss_dssp CCHHHHHHHHHHGGGGSG---GGSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhHHHH---cCChHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 455789999999886544 38999999999999999999999999999999999999999999999998888766544
Q ss_pred HH------HHHHHHHHHHHHhCCCccc--ccC-CChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHH
Q 008499 91 VL------EELKMHDSFVKEWGTDLAK--MAT-VNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAM 160 (563)
Q Consensus 91 i~------~E~~~h~~~~~~~gi~~~~--~~~-~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al 160 (563)
.. .|+++|..+++.+|++.++ ..+ +.|+|+.|++++.+.+. ++ ++++++|+
T Consensus 84 eeg~~~~~~hiel~~~fa~alGis~eel~~~~~~~P~t~~~vdaY~~~a~~~s-------------------~~e~vAA~ 144 (258)
T 3hlx_A 84 HDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRAC-------------------WQEAACSS 144 (258)
T ss_dssp HHCSSSSCHHHHHHHHHHHHTTCCHHHHHTCCSCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHGG
T ss_pred HhcccCCccHHHHHHHHHHHcCCCHHHHhhCCCCCcHHHHHHHHHHHHHhcCC-------------------HHHHHHHH
Confidence 33 5789999999999999873 455 69999988887777774 44 37899999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHH-------HHHHHHhhccCCHHHHHHHHHHHHHHH
Q 008499 161 SPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN-------EDLLDKLSVSLTGEELDIIEKLYHQAM 233 (563)
Q Consensus 161 ~pC~~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l-------~~~ld~~~~~~~~~~~~~~~~~f~~~~ 233 (563)
++|.+. ..|.+.... .-++|..||+.++-+.|...+.+. .+++-..+ .|+++++++.+++..+|
T Consensus 145 L~E~~~-p~i~~~r~~------~~~~~y~~i~~~~l~yF~~h~~~a~~D~~hal~~vl~~~--~t~e~q~~a~~a~~~~~ 215 (258)
T 3hlx_A 145 LTELFA-PQIHQSRLD------SWPQHYPWIKEEGYFFFRSRLSQANRDVEHGLALAKAYC--DSAEKQNRMLEILQFKL 215 (258)
T ss_dssp GGGGTH-HHHHHHHHH------HHHHHCTTSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHhh------cHHHhCCCCChhHHHHHHHHhhcccccHHHHHHHHHHHc--CCHHHHHHHHHHHHHHH
Confidence 976544 333332221 235688899999999998887555 55543332 48999999999999999
Q ss_pred HHHHHhhccCCC
Q 008499 234 KLEVEFFCAQPL 245 (563)
Q Consensus 234 ~lE~~Fw~~a~~ 245 (563)
+++|.|||+...
T Consensus 216 ~~lw~~lDa~~~ 227 (258)
T 3hlx_A 216 DILWSMLDAMTM 227 (258)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999843
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-22 Score=204.51 Aligned_cols=207 Identities=18% Similarity=0.258 Sum_probs=156.2
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
++++||||||||||..+.... +. .+++.+.+.+..+++.|.+....+.++|.|.+..+.
T Consensus 42 ~kL~VV~DfdgTLT~~~~~g~---------~~------------~s~~~i~e~~~~~~~~~~~~~~~l~~~y~~~e~~~~ 100 (297)
T 4fe3_A 42 AKLQIITDFNMTLSRFSYNGK---------RC------------PTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPV 100 (297)
T ss_dssp HHEEEEECCTTTTBCSEETTE---------EC------------CCHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred hhEEEEEcCCCCceeeccCCe---------Ee------------echHHHHHhhhhcCHHHHHHHHHHHHhhcccccccc
Confidence 578899999999998763211 00 012223333444556677777778888888887777
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChH
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~ 419 (563)
.+.++..+ .|.+|+.++++.+.+. |++.+.+.+.++ .+++|||+.++++.|+++| ++++|+|+|+ .+
T Consensus 101 ~~~~ek~~---~~~~~~~~~~e~l~~~----gl~~~~~~~~v~~~~i~l~~g~~e~i~~l~~~g---i~v~ivSgg~-~~ 169 (297)
T 4fe3_A 101 LTVEEKFP---YMVEWYTKSHGLLIEQ----GIPKAKLKEIVADSDVMLKEGYENFFGKLQQHG---IPVFIFSAGI-GD 169 (297)
T ss_dssp SCHHHHHH---HHHHHHHHHHHHHHHT----TCBGGGHHHHHHTSCCCBCBTHHHHHHHHHHTT---CCEEEEEEEE-HH
T ss_pred ccHHHhhh---hhHHhhhhhHHHHhhc----CccHHHHHHHHHhcCCCCCCcHHHHHHHHHHcC---CeEEEEeCCc-HH
Confidence 77777654 5679999999999885 457777777665 5899999999999999999 9999999997 88
Q ss_pred hhHHHHhC-CC--CcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHH---HHhCCCCCccEEEEcCCcCchHHhh
Q 008499 420 LIRASFSS-GL--NALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTL---EKYGTDRKNLSVYIGDSVGDLLCLL 493 (563)
Q Consensus 420 ~I~~~L~~-~l--~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~---~~~~~~~~~~viyiGDs~~Dl~~l~ 493 (563)
+|+.++++ |+ .+.+|+||.+.++++..++.+..++....+|..-+.+.. .... .+.+++++|||.||++|+.
T Consensus 170 ~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~k~~~~~~~~~--~~~~v~~vGDGiNDa~m~k 247 (297)
T 4fe3_A 170 VLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLK--DNSNIILLGDSQGDLRMAD 247 (297)
T ss_dssp HHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTCHHHHHHTT--TCCEEEEEESSGGGGGTTT
T ss_pred HHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHHHHHHHHHhhc--cCCEEEEEeCcHHHHHHHh
Confidence 99999887 54 567899999999988777777777777777765443322 1111 2468999999999999955
Q ss_pred ---hcCccEEEc
Q 008499 494 ---EADIGIVIG 502 (563)
Q Consensus 494 ---~Ad~givi~ 502 (563)
.||+||.+|
T Consensus 248 ~l~~advgiaiG 259 (297)
T 4fe3_A 248 GVANVEHILKIG 259 (297)
T ss_dssp TCSCCSEEEEEE
T ss_pred CccccCeEEEEE
Confidence 899999987
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-20 Score=180.26 Aligned_cols=147 Identities=18% Similarity=0.164 Sum_probs=125.9
Q ss_pred ccCCCCHHHHHHHhcc-----C--CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEe
Q 008499 370 VLKGINLEDIKKAGER-----L--SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSF 441 (563)
Q Consensus 370 ~f~Gi~~~~i~~~~~~-----i--~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~ 441 (563)
.+.|++.+++.+..+. + .+.||+.++++.++++| ++++|+|++. ..+++.+++. |+ .++++|.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~~~~~~~~~g~--~~~~~~~~~~ 141 (232)
T 3fvv_A 68 LLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAG---DLCALVTATN-SFVTAPIARAFGV--QHLIATDPEY 141 (232)
T ss_dssp HHHTSCHHHHHHHHHHHHHHTTGGGCCHHHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTC--CEEEECEEEE
T ss_pred HhcCCCHHHHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCC--CEEEEcceEE
Confidence 3457787777765432 2 67999999999999999 9999999994 8888888876 66 4799999999
Q ss_pred cCccccCcccccCCCCCCcHHHHHHHHHHhC---CCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCee
Q 008499 442 KESISTGEIIEKVESPIDKVQAFNNTLEKYG---TDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTF 518 (563)
Q Consensus 442 ~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~---~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~ 518 (563)
.+|.++|.+.+..+.+.+|...++.+++..+ . .+.++++||||.+|++|+..||+++++.+++.|+++|+++||++
T Consensus 142 ~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~-~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~~~a~~~~w~~ 220 (232)
T 3fvv_A 142 RDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALG-DFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQV 220 (232)
T ss_dssp ETTEEEEEEESSCSSTHHHHHHHHHHHHHTTCCGG-GSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHHHHHHHHTCEE
T ss_pred ECCEEeeeecCCCCcchHHHHHHHHHHHHcCCCcC-chhheEEEeCCHhhHHHHHhCCCeEEECcCHHHHHHHHHCCCcE
Confidence 8898999888777778899999999988776 4 35789999999999999999999999999999999999999999
Q ss_pred eecCc
Q 008499 519 IPLYP 523 (563)
Q Consensus 519 ~p~~~ 523 (563)
+++.+
T Consensus 221 ~~~~~ 225 (232)
T 3fvv_A 221 IDLFD 225 (232)
T ss_dssp ECCC-
T ss_pred eehhh
Confidence 99975
|
| >3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-19 Score=184.82 Aligned_cols=204 Identities=10% Similarity=0.079 Sum_probs=156.8
Q ss_pred CcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008499 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (563)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (563)
..++|.+.|++.... ....+|||++++.+|+|+.+.|++|+.||++|+..|++.++.+++++++.+.+..+.+.+-.-
T Consensus 106 s~~~F~~~L~~~~~~--~~~~~HPf~~~l~~G~Ls~e~~r~yl~Qdy~yl~~f~~~lA~~~a~~~~~~~r~~l~e~i~DE 183 (332)
T 3bjd_A 106 SEEDFQKRLEQEIAA--QSRERHPMSQYVFSGSASRAQLQVFLRHQWFRTFRLYRDAADLLVNLTDVDEAAALARYLYGE 183 (332)
T ss_dssp CHHHHHHHHHHHHHC--C--CCCHHHHHHHHTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHTCCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh--cccccCcHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 556799999988754 334789999999999999999999999999999999999999999999998877766643211
Q ss_pred ----HHH---HHHHHHHHHHhCCCcc-cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHH-
Q 008499 92 ----LEE---LKMHDSFVKEWGTDLA-KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMS- 161 (563)
Q Consensus 92 ----~~E---~~~h~~~~~~~gi~~~-~~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~- 161 (563)
..| .++|.++++.+|++.+ ...+..|++..|++|+..++. +++ ++++++++
T Consensus 184 ~G~g~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~~~~~~-------------------~~alaal~~ 244 (332)
T 3bjd_A 184 LGEEDEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAFRHAEV-------------------GWGLAVFYI 244 (332)
T ss_dssp TTTTCGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHHHCSST-------------------HHHHHHHHH
T ss_pred hCCCCccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHHhcCCH-------------------HHHHHHHHH
Confidence 124 7999999999999986 345568999999999999985 543 56788888
Q ss_pred ---HHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Q 008499 162 ---PCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVE 238 (563)
Q Consensus 162 ---pC~~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~ 238 (563)
||.|+|..+++.+.+...+....+.|+.||+.-....+..+ ..+++++. ++++.+.+..+-..+++.++.
T Consensus 245 ~E~~~p~~y~~i~~~l~~~g~~~~~~~yf~~HI~lD~~H~~~~~----~~ll~~~~---~~~~q~~~~~a~~~~l~~~~~ 317 (332)
T 3bjd_A 245 TELVVPGNHEKLYRALLQAGLSEDQAEYYKVHISLVPPRAKREW----QLIARRIP---DVQFQNAFLTSLSQHFRVERA 317 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTTTHHHHHHHHHCC---CTTH----HHHHTTTT---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCcccchHHHHHHHHhHHHHHHHH----HHHHHhCC---CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998743212233789999997553322222 34667653 455555666666677799999
Q ss_pred hhccC
Q 008499 239 FFCAQ 243 (563)
Q Consensus 239 Fw~~a 243 (563)
|||..
T Consensus 318 f~D~l 322 (332)
T 3bjd_A 318 YYDAI 322 (332)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99976
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=177.94 Aligned_cols=191 Identities=21% Similarity=0.280 Sum_probs=152.1
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+++.+|+|||||||+..+++..+++.. . ....+..+...|+.+
T Consensus 183 ~~~k~viFD~DgTLi~~~~~~~la~~~-----g-----------------~~~~~~~~~~~~~~g--------------- 225 (415)
T 3p96_A 183 RAKRLIVFDVDSTLVQGEVIEMLAAKA-----G-----------------AEGQVAAITDAAMRG--------------- 225 (415)
T ss_dssp TCCCEEEECTBTTTBSSCHHHHHHHHT-----T-----------------CHHHHHHHHHHHHTT---------------
T ss_pred cCCcEEEEcCcccCcCCchHHHHHHHc-----C-----------------CcHHHHHHHHHHhcC---------------
Confidence 466799999999999999888877643 1 334444444443322
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
..++.+ .+. .++ ..++|++.+.+.+..+.+.+.||+.++++.++++| ++++|+|+|+ ..+
T Consensus 226 ~~~~~~------~~~-------~~~---~~l~~~~~~~~~~~~~~~~~~pg~~e~l~~Lk~~G---~~~~ivS~~~-~~~ 285 (415)
T 3p96_A 226 ELDFAQ------SLQ-------QRV---ATLAGLPATVIDEVAGQLELMPGARTTLRTLRRLG---YACGVVSGGF-RRI 285 (415)
T ss_dssp CSCHHH------HHH-------HHH---HTTTTCBTHHHHHHHHHCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHH
T ss_pred CcCHHH------HHH-------HHH---HHhcCCCHHHHHHHHHhCccCccHHHHHHHHHHCC---CEEEEEcCCc-HHH
Confidence 122322 111 122 46789999999988889999999999999999999 9999999995 778
Q ss_pred hHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 421 IRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 421 I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
++..++. |+ .++++|.+.+.+|.+||.+.+.+..+..|...++.+++..+.+ +.++++||||.+|++|+..||+|+
T Consensus 286 ~~~~~~~lgl--~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~-~~~~i~vGD~~~Di~~a~~aG~~v 362 (415)
T 3p96_A 286 IEPLAEELML--DYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVP-MAQTVAVGDGANDIDMLAAAGLGI 362 (415)
T ss_dssp HHHHHHHTTC--SEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred HHHHHHHcCc--cceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcC-hhhEEEEECCHHHHHHHHHCCCeE
Confidence 8888776 66 5899999999999999998877777788999999999988763 578999999999999999999999
Q ss_pred EEcCChhHHHHH
Q 008499 500 VIGSSSSLRRVG 511 (563)
Q Consensus 500 vi~~~~~L~~~~ 511 (563)
++++++.+++.+
T Consensus 363 a~~~~~~~~~~a 374 (415)
T 3p96_A 363 AFNAKPALREVA 374 (415)
T ss_dssp EESCCHHHHHHC
T ss_pred EECCCHHHHHhC
Confidence 998888777654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.9e-17 Score=166.88 Aligned_cols=191 Identities=17% Similarity=0.200 Sum_probs=149.3
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+++.+|+|||||||+..++...+++.. + ....+..+...|+.+.
T Consensus 106 ~~~kaviFDlDGTLid~~~~~~la~~~-----g-----------------~~~~~~~~~~~~~~g~-------------- 149 (317)
T 4eze_A 106 PANGIIAFDMDSTFIAEEGVDEIAREL-----G-----------------MSTQITAITQQAMEGK-------------- 149 (317)
T ss_dssp CCSCEEEECTBTTTBSSCHHHHHHHHT-----T-----------------CHHHHHHHHHHHHTTS--------------
T ss_pred CCCCEEEEcCCCCccCCccHHHHHHHh-----C-----------------CcHHHHHHHHHHhcCC--------------
Confidence 466799999999999999887776633 1 3334444444332221
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
.++.+. +. .++ ..++|.+.+.+.+..+.+.+.||+.++++.++++| ++++|||++. ..+
T Consensus 150 -~~~~~~------l~-------~~~---~~l~~~~~~~i~~~~~~~~l~pg~~e~L~~Lk~~G---~~v~IvSn~~-~~~ 208 (317)
T 4eze_A 150 -LDFNAS------FT-------RRI---GMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAKG---FKTAIISGGL-DIF 208 (317)
T ss_dssp -SCHHHH------HH-------HHH---HTTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHH
T ss_pred -CCHHHH------HH-------HHH---HHhcCCCHHHHHHHHhCCEECcCHHHHHHHHHhCC---CEEEEEeCcc-HHH
Confidence 222221 11 122 45678899999998889999999999999999999 9999999995 888
Q ss_pred hHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 421 IRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 421 I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
++.+++. |+ ..+++|.+.+++|.++|.+.+.+..+..|...++.+++..+.+ +.++++||||.+|+.|+..||+|+
T Consensus 209 ~~~~l~~lgl--~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~-~~~~i~VGDs~~Di~aa~~AG~~v 285 (317)
T 4eze_A 209 TQRLKARYQL--DYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIA-TENIIACGDGANDLPMLEHAGTGI 285 (317)
T ss_dssp HHHHHHHHTC--SEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred HHHHHHHcCC--CeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHCCCeE
Confidence 8888877 66 5789999999999999988777777778899999999888763 578999999999999999999999
Q ss_pred EEcCChhHHHHH
Q 008499 500 VIGSSSSLRRVG 511 (563)
Q Consensus 500 vi~~~~~L~~~~ 511 (563)
++++++.+++.+
T Consensus 286 a~~~~~~~~~~a 297 (317)
T 4eze_A 286 AWKAKPVVREKI 297 (317)
T ss_dssp EESCCHHHHHHC
T ss_pred EeCCCHHHHHhc
Confidence 998777766544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-16 Score=167.18 Aligned_cols=129 Identities=19% Similarity=0.220 Sum_probs=105.0
Q ss_pred hccCCCCHHHHHHHhcc----------------------------------CCCCchHHHHHHHHHHcCCCCCcEEEEcc
Q 008499 369 GVLKGINLEDIKKAGER----------------------------------LSLQDGCTTFFQKVVKNENLNANVHVLSY 414 (563)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~----------------------------------i~lrpG~~efl~~l~~~g~~~~~v~IvS~ 414 (563)
.+|.|++.+++++.++. +.++||+.++++.|+++| ++++|||+
T Consensus 169 ~l~~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G---~~v~IVSg 245 (385)
T 4gxt_A 169 FLLKNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENG---IDCYIVSA 245 (385)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred HHHcCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCC---CeEEEEcC
Confidence 57899999999886541 237999999999999999 99999999
Q ss_pred ccChHhhHHHHhC-C----CCcceEEeeccEec-CccccCcccc--cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCc
Q 008499 415 CWCGDLIRASFSS-G----LNALNVHANEFSFK-ESISTGEIIE--KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV 486 (563)
Q Consensus 415 gws~~~I~~~L~~-~----l~~~~I~aN~l~~~-~g~~tG~~~~--~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~ 486 (563)
|. .++++.+.+. | ++..+|++|++.++ +|.+||++.+ +++.+.+|...+++++.... ....++++|||.
T Consensus 246 g~-~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~~~--~~~~i~a~GDs~ 322 (385)
T 4gxt_A 246 SF-IDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKNDR--NYGPIMVGGDSD 322 (385)
T ss_dssp EE-HHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCCTT--EECCSEEEECSG
T ss_pred Cc-HHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHhcC--CCCcEEEEECCH
Confidence 96 8899988776 3 56689999999996 6899998875 46778899999999875321 135689999999
Q ss_pred CchHHhhh---cCccEEEcC
Q 008499 487 GDLLCLLE---ADIGIVIGS 503 (563)
Q Consensus 487 ~Dl~~l~~---Ad~givi~~ 503 (563)
||++||.. ..+|++|+.
T Consensus 323 ~D~~ML~~~~~~~~~liinr 342 (385)
T 4gxt_A 323 GDFAMLKEFDHTDLSLIIHR 342 (385)
T ss_dssp GGHHHHHHCTTCSEEEEECC
T ss_pred hHHHHHhcCccCceEEEEcC
Confidence 99999996 344677763
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=7.4e-17 Score=154.42 Aligned_cols=135 Identities=17% Similarity=0.162 Sum_probs=116.0
Q ss_pred hccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCcccc
Q 008499 369 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESIST 447 (563)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~t 447 (563)
..+.|.+.+++.+..+.+.+.||+.++++.++++| ++++|+|++ ...+++..++. ++. ..+++.+.++++..+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~S~~-~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~ 130 (217)
T 3m1y_A 57 SKLKNMPLKLAKEVCESLPLFEGALELVSALKEKN---YKVVCFSGG-FDLATNHYRDLLHLD--AAFSNTLIVENDALN 130 (217)
T ss_dssp HTTTTCBHHHHHHHHTTCCBCBTHHHHHHHHHTTT---EEEEEEEEE-EHHHHHHHHHHHTCS--EEEEEEEEEETTEEE
T ss_pred HHhcCCCHHHHHHHHhcCcCCCCHHHHHHHHHHCC---CEEEEEcCC-chhHHHHHHHHcCcc--hhccceeEEeCCEEE
Confidence 45578899999999889999999999999999998 999999998 47788888876 663 567888888888888
Q ss_pred CcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHH
Q 008499 448 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV 510 (563)
Q Consensus 448 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~ 510 (563)
|.+.+.++.+..|...++.+++..+.+ +.++++||||.+|++|+..||+++++++.+.+++.
T Consensus 131 ~~~~~~~~~~k~k~~~~~~~~~~~g~~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~ 192 (217)
T 3m1y_A 131 GLVTGHMMFSHSKGEMLLVLQRLLNIS-KTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQH 192 (217)
T ss_dssp EEEEESCCSTTHHHHHHHHHHHHHTCC-STTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTT
T ss_pred eeeccCCCCCCChHHHHHHHHHHcCCC-HhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHh
Confidence 888777778889999999999988764 57899999999999999999999999877776643
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-15 Score=157.49 Aligned_cols=189 Identities=17% Similarity=0.202 Sum_probs=143.6
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
.+..++|||||||+..+++..+++.. . ....+..+...++.+ .
T Consensus 106 ~~~~viFD~DgTLi~~~~~~~~~~~~-----g-----------------~~~~~~~~~~~~~~~---------------~ 148 (335)
T 3n28_A 106 KPGLIVLDMDSTAIQIECIDEIAKLA-----G-----------------VGEEVAEVTERAMQG---------------E 148 (335)
T ss_dssp SCCEEEECSSCHHHHHHHHHHHHHHH-----T-----------------CHHHHHHHHHHHHTT---------------S
T ss_pred CCCEEEEcCCCCCcChHHHHHHHHHc-----C-----------------CchHHHHHHHHHhcC---------------C
Confidence 45689999999999988877766644 1 223344443333221 1
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhh
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI 421 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I 421 (563)
+++... +. .++ ..+++.+.+.+....+.++++||+.++++.++++| +++.|+|++ ...++
T Consensus 149 ~~~~~~------~~-------~~~---~~l~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g---~~~~ivS~~-~~~~~ 208 (335)
T 3n28_A 149 LDFEQS------LR-------LRV---SKLKDAPEQILSQVRETLPLMPELPELVATLHAFG---WKVAIASGG-FTYFS 208 (335)
T ss_dssp SCHHHH------HH-------HHH---HTTTTCBTTHHHHHHTTCCCCTTHHHHHHHHHHTT---CEEEEEEEE-EHHHH
T ss_pred CCHHHH------HH-------HHH---HHhcCCCHHHHHHHHHhCCcCcCHHHHHHHHHHCC---CEEEEEeCC-cHHHH
Confidence 222211 11 122 34577777778888888999999999999999999 999999998 47778
Q ss_pred HHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 422 RASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 422 ~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
+..++. |+ ..+++|.+.+.++.+||.+.+.+..+..|...++.+++..+.+ +..+++||||.||++|+..||+|++
T Consensus 209 ~~~~~~lgl--~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~lgi~-~~~~v~vGDs~nDi~~a~~aG~~va 285 (335)
T 3n28_A 209 DYLKEQLSL--DYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVE-IHNTVAVGDGANDLVMMAAAGLGVA 285 (335)
T ss_dssp HHHHHHHTC--SEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HHHHHHcCC--CeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEE
Confidence 877776 66 5789999999888889988777777778999999999988764 5789999999999999999999999
Q ss_pred EcCChhHHHH
Q 008499 501 IGSSSSLRRV 510 (563)
Q Consensus 501 i~~~~~L~~~ 510 (563)
+++++.+++.
T Consensus 286 ~~~~~~~~~~ 295 (335)
T 3n28_A 286 YHAKPKVEAK 295 (335)
T ss_dssp ESCCHHHHTT
T ss_pred eCCCHHHHhh
Confidence 9777766543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.7e-14 Score=134.32 Aligned_cols=132 Identities=20% Similarity=0.261 Sum_probs=99.0
Q ss_pred ccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccC
Q 008499 370 VLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTG 448 (563)
Q Consensus 370 ~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG 448 (563)
.+.|....+..+......+.||..++++.++++| +++.|+|++. ...++..++. ++ ..+++|.+.+.++..+|
T Consensus 59 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 132 (211)
T 1l7m_A 59 LLKDLPIEKVEKAIKRITPTEGAEETIKELKNRG---YVVAVVSGGF-DIAVNKIKEKLGL--DYAFANRLIVKDGKLTG 132 (211)
T ss_dssp TTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---EEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEEE
T ss_pred HhcCCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHcCC--CeEEEeeeEEECCEEcC
Confidence 3466665666666566788999999999999999 9999999873 5566666655 55 34566666554444455
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHH
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 508 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~ 508 (563)
........+.+|...+..+++..+.+ ..++++||||.||++|+..||+++++++.+.++
T Consensus 133 ~~~~~~~~~~~K~~~l~~~~~~lgi~-~~~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~~ 191 (211)
T 1l7m_A 133 DVEGEVLKENAKGEILEKIAKIEGIN-LEDTVAVGDGANDISMFKKAGLKIAFCAKPILK 191 (211)
T ss_dssp EEECSSCSTTHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEEESCCHHHH
T ss_pred CcccCccCCccHHHHHHHHHHHcCCC-HHHEEEEecChhHHHHHHHCCCEEEECCCHHHH
Confidence 54434444668999999999888764 578999999999999999999999998665443
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-13 Score=134.41 Aligned_cols=127 Identities=17% Similarity=0.137 Sum_probs=93.9
Q ss_pred HHHHHHH-hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCC-CcceEEeeccEecCccccCcccc-
Q 008499 376 LEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGL-NALNVHANEFSFKESISTGEIIE- 452 (563)
Q Consensus 376 ~~~i~~~-~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l-~~~~I~aN~l~~~~g~~tG~~~~- 452 (563)
.+++.++ ...+.+.||+.++++.|+++| ++++|+|++ +..+++.+++ ++ +...|+|++....++.++|.+.+
T Consensus 65 ~~~~~~~~~~~~~~~pg~~~~l~~L~~~g---~~~~ivS~~-~~~~~~~~l~-~l~~~~~v~~~~~~~~~~~~~~~~~kp 139 (236)
T 2fea_A 65 KEEITSFVLEDAKIREGFREFVAFINEHE---IPFYVISGG-MDFFVYPLLE-GIVEKDRIYCNHASFDNDYIHIDWPHS 139 (236)
T ss_dssp HHHHHHHHHHHCCBCTTHHHHHHHHHHHT---CCEEEEEEE-EHHHHHHHHT-TTSCGGGEEEEEEECSSSBCEEECTTC
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHhCC---CeEEEEeCC-cHHHHHHHHh-cCCCCCeEEeeeeEEcCCceEEecCCC
Confidence 3444444 346899999999999999999 999999999 4788888887 65 34679999988776666665432
Q ss_pred --c-CC--CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhC
Q 008499 453 --K-VE--SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFG 515 (563)
Q Consensus 453 --~-~~--~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~g 515 (563)
. +. ++.+|..+++++. . .+.+++|||||.+|+.++..||+.++. ..+.+.+...|
T Consensus 140 ~p~~~~~~~~~~K~~~~~~~~----~-~~~~~~~vGDs~~Di~~a~~aG~~~~~---~~~~~~~~~~~ 199 (236)
T 2fea_A 140 CKGTCSNQCGCCKPSVIHELS----E-PNQYIIMIGDSVTDVEAAKLSDLCFAR---DYLLNECREQN 199 (236)
T ss_dssp CCTTCCSCCSSCHHHHHHHHC----C-TTCEEEEEECCGGGHHHHHTCSEEEEC---HHHHHHHHHTT
T ss_pred CccccccccCCcHHHHHHHHh----c-cCCeEEEEeCChHHHHHHHhCCeeeec---hHHHHHHHHCC
Confidence 2 22 5789998887653 2 257899999999999999999986653 12344444444
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.2e-14 Score=133.70 Aligned_cols=118 Identities=18% Similarity=0.280 Sum_probs=92.6
Q ss_pred hccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCcccc
Q 008499 369 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESIST 447 (563)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~t 447 (563)
..+.+.+.+.+.+..+.+.+.||+.++++.++++| ++++|+|++. ...++.. +. ++ ..+ .+.+.+.++..+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~-~~~~~--~~~-~~~~~~~~~~~~ 132 (201)
T 4ap9_A 61 GLIRGIDEGTFLRTREKVNVSPEARELVETLREKG---FKVVLISGSF-EEVLEPF-KELGD--EFM-ANRAIFEDGKFQ 132 (201)
T ss_dssp HHTTTCBHHHHHHGGGGCCCCHHHHHHHHHHHHTT---CEEEEEEEEE-TTTSGGG-TTTSS--EEE-EEEEEEETTEEE
T ss_pred HHhcCCCHHHHHHHHHhCCCChhHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHH-HHcCc--hhh-eeeEEeeCCceE
Confidence 34678889999998889999999999999999999 9999999884 5566655 43 43 334 677666666555
Q ss_pred CcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 448 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 448 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
| ....+..|...++++ . +.++++||||.||+.|++.||++|++++..
T Consensus 133 ~----~~~~~~~k~~~l~~l-~------~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~ 179 (201)
T 4ap9_A 133 G----IRLRFRDKGEFLKRF-R------DGFILAMGDGYADAKMFERADMGIAVGREI 179 (201)
T ss_dssp E----EECCSSCHHHHHGGG-T------TSCEEEEECTTCCHHHHHHCSEEEEESSCC
T ss_pred C----CcCCccCHHHHHHhc-C------cCcEEEEeCCHHHHHHHHhCCceEEECCCC
Confidence 5 223445688888877 1 468999999999999999999999998653
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.7e-12 Score=123.74 Aligned_cols=121 Identities=20% Similarity=0.195 Sum_probs=91.3
Q ss_pred HHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEec-CccccCccc
Q 008499 376 LEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFK-ESISTGEII 451 (563)
Q Consensus 376 ~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~-~g~~tG~~~ 451 (563)
.+.+.+... ...+.||+.++++.++++| ++++|+|++ +...++.+++. |+...+++++.+.++ ++.++|.-.
T Consensus 73 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g---~~~~i~T~~-~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~ 148 (225)
T 1nnl_A 73 REQVQRLIAEQPPHLTPGIRELVSRLQERN---VQVFLISGG-FRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE 148 (225)
T ss_dssp HHHHHHHHHHSCCCBCTTHHHHHHHHHHTT---CEEEEEEEE-EHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT
T ss_pred HHHHHHHHHhccCCCCccHHHHHHHHHHCC---CcEEEEeCC-hHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC
Confidence 444444433 4789999999999999999 999999998 47788888877 775446888887765 344444322
Q ss_pred -ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC
Q 008499 452 -EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 503 (563)
Q Consensus 452 -~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~ 503 (563)
...+.+..|...++.+++..+. .++++||||.+|+.++..||++|.++.
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~vGDs~~Di~~a~~ag~~i~~~~ 198 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHF---KKIIMIGDGATDMEACPPADAFIGFGG 198 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCC---SCEEEEESSHHHHTTTTTSSEEEEECS
T ss_pred CCcccCCCchHHHHHHHHHHcCC---CcEEEEeCcHHhHHHHHhCCeEEEecC
Confidence 1223345788888888887764 579999999999999999998777753
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=4.5e-12 Score=130.65 Aligned_cols=136 Identities=17% Similarity=0.185 Sum_probs=101.6
Q ss_pred hhccCCCCHHHHHHHhcc-------------------------CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhH
Q 008499 368 SGVLKGINLEDIKKAGER-------------------------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR 422 (563)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~-------------------------i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~ 422 (563)
..+|+|+|.+++++.++. ..+.|++.++++.|+++| ++++|||++. .++++
T Consensus 99 ~~~~aGmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G---~~v~ivSas~-~~~v~ 174 (327)
T 4as2_A 99 AQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENG---IEVYVISAAH-EELVR 174 (327)
T ss_dssp HHTTTTSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTT---CEEEEEEEEE-HHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHH
Confidence 357899999999887552 158899999999999999 9999999984 77777
Q ss_pred HHHhC-----CCCcceEEeeccEecCcc---------------c----------cCcccccCCCCCCcHHHHHHHHHHhC
Q 008499 423 ASFSS-----GLNALNVHANEFSFKESI---------------S----------TGEIIEKVESPIDKVQAFNNTLEKYG 472 (563)
Q Consensus 423 ~~L~~-----~l~~~~I~aN~l~~~~g~---------------~----------tG~~~~~~~~g~~K~~~l~~~~~~~~ 472 (563)
.+... |++..+|++.++..+++. + ||....+.+.+.+|...+++++..
T Consensus 175 ~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-- 252 (327)
T 4as2_A 175 MVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDR-- 252 (327)
T ss_dssp HHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS--
T ss_pred HHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHhh--
Confidence 76654 577789999998876432 1 122233456678999999988742
Q ss_pred CCCCccEEEEcCC-cCchHHhhhc----CccEEEcCChhHHHHH
Q 008499 473 TDRKNLSVYIGDS-VGDLLCLLEA----DIGIVIGSSSSLRRVG 511 (563)
Q Consensus 473 ~~~~~~viyiGDs-~~Dl~~l~~A----d~givi~~~~~L~~~~ 511 (563)
.+..++++||| -||++||..+ ++++++..+.+.++.+
T Consensus 253 --g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~~~~e~~ 294 (327)
T 4as2_A 253 --WKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQI 294 (327)
T ss_dssp --SCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCHHHHHHH
T ss_pred --CCCCeEEecCCCCCCHHHHhccccCCCeEEEEecCCchHHHH
Confidence 13458999999 5999999663 4577777666655433
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.4e-12 Score=117.96 Aligned_cols=113 Identities=17% Similarity=0.145 Sum_probs=80.9
Q ss_pred CHHHHHHHhc---cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-ccccCc
Q 008499 375 NLEDIKKAGE---RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-SISTGE 449 (563)
Q Consensus 375 ~~~~i~~~~~---~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~ 449 (563)
..+.+.+..+ ...+.||+.++++.++++| ++++|+|++ ...+++..++. ++...+++++.+.+.. +.+++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 141 (219)
T 3kd3_A 67 TKQSIKEFSNKYCPNLLTDGIKELVQDLKNKG---FEIWIFSGG-LSESIQPFADYLNIPRENIFAVETIWNSDGSFKE- 141 (219)
T ss_dssp BHHHHHHHHHHHTTTTBCTTHHHHHHHHHHTT---CEEEEEEEE-EHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEE-
T ss_pred CHHHHHHHHHhhccccCChhHHHHHHHHHHCC---CeEEEEcCC-cHHHHHHHHHHcCCCcccEEEeeeeecCCCceec-
Confidence 3444554433 3568999999999999999 999999998 47888888877 7766678998888753 44443
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
+.++.+....|...+.+.. +. .+.++++||||.||++|+. +++
T Consensus 142 ~~~~~~~~~~~~~~l~~~~---~~-~~~~~~~vGD~~~Di~~~~-~G~ 184 (219)
T 3kd3_A 142 LDNSNGACDSKLSAFDKAK---GL-IDGEVIAIGDGYTDYQLYE-KGY 184 (219)
T ss_dssp EECTTSTTTCHHHHHHHHG---GG-CCSEEEEEESSHHHHHHHH-HTS
T ss_pred cCCCCCCcccHHHHHHHHh---CC-CCCCEEEEECCHhHHHHHh-CCC
Confidence 3333344445666555543 33 2478999999999999985 543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.20 E-value=4.8e-10 Score=106.30 Aligned_cols=122 Identities=20% Similarity=0.228 Sum_probs=89.3
Q ss_pred CCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEec-CccccCcc
Q 008499 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFK-ESISTGEI 450 (563)
Q Consensus 373 Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~-~g~~tG~~ 450 (563)
+++.+++.+..+.+.+.||+.++++.++++ ++++|+|++ ....++..++. |+. .++++.+.+. ++..+|..
T Consensus 55 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----~~~~i~s~~-~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~~~~~ 127 (206)
T 1rku_A 55 GLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDT-FYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQ 127 (206)
T ss_dssp TCCHHHHHHHHTTCCCCTTHHHHHHHHHTT----SEEEEEEEE-EHHHHHHHHHHTTCC--CEEEEEEEECTTSCEEEEE
T ss_pred CCCHHHHHHHHHhcCCCccHHHHHHHHHhc----CcEEEEECC-hHHHHHHHHHHcCCc--ceecceeEEcCCceEEeee
Confidence 456677776667889999999999999863 699999998 47788888876 653 4566666553 23233321
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHH
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 509 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~ 509 (563)
. ..+..|..+++++... +.++++||||.+|+.|+..||+++++.+.+.+.+
T Consensus 128 ~---p~p~~~~~~l~~l~~~-----~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~ 178 (206)
T 1rku_A 128 L---RQKDPKRQSVIAFKSL-----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIR 178 (206)
T ss_dssp C---CSSSHHHHHHHHHHHT-----TCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHH
T ss_pred c---CCCchHHHHHHHHHhc-----CCEEEEEeCChhhHHHHHhcCccEEECCcHHHHH
Confidence 1 2346688888877542 4689999999999999999999988876655553
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.3e-09 Score=101.46 Aligned_cols=101 Identities=10% Similarity=0.024 Sum_probs=77.2
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
.....+.||+.++++.++++| ++++|+|.+ +...++..++. ++.. ..+++.+ ....+..
T Consensus 92 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp 153 (230)
T 3um9_A 92 YLSLTPFADVPQALQQLRAAG---LKTAILSNG-SRHSIRQVVGNSGLTNSFDHLISVD--------------EVRLFKP 153 (230)
T ss_dssp TTSCCBCTTHHHHHHHHHHTT---CEEEEEESS-CHHHHHHHHHHHTCGGGCSEEEEGG--------------GTTCCTT
T ss_pred HhcCCCCCCHHHHHHHHHhCC---CeEEEEeCC-CHHHHHHHHHHCCChhhcceeEehh--------------hcccCCC
Confidence 357889999999999999998 999999998 57778887776 6532 1222221 1112334
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
|...++.+++..+.+ +.++++||||.+|+.|++.||+++++.
T Consensus 154 ~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~ 195 (230)
T 3um9_A 154 HQKVYELAMDTLHLG-ESEILFVSCNSWDATGAKYFGYPVCWI 195 (230)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred ChHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 678888888888764 578999999999999999999987774
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.6e-09 Score=103.70 Aligned_cols=100 Identities=15% Similarity=0.212 Sum_probs=75.8
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. ..+++. . ....+..|
T Consensus 88 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~-----------~---~~~~~kp~ 149 (233)
T 3s6j_A 88 HQIIALPGAVELLETLDKEN---LKWCIATSG-GIDTATINLKALKLDINKINIVTR-----------D---DVSYGKPD 149 (233)
T ss_dssp GGCEECTTHHHHHHHHHHTT---CCEEEECSS-CHHHHHHHHHTTTCCTTSSCEECG-----------G---GSSCCTTS
T ss_pred ccCccCCCHHHHHHHHHHCC---CeEEEEeCC-chhhHHHHHHhcchhhhhheeecc-----------c---cCCCCCCC
Confidence 45789999999999999998 999999998 47788888876 5532 112221 1 11223446
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
...++.+++..+.+ +.++++||||.+|+.|++.+|+ +|.+.
T Consensus 150 ~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 191 (233)
T 3s6j_A 150 PDLFLAAAKKIGAP-IDECLVIGDAIWDMLAARRCKATGVGLL 191 (233)
T ss_dssp THHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEG
T ss_pred hHHHHHHHHHhCCC-HHHEEEEeCCHHhHHHHHHCCCEEEEEe
Confidence 78889999888764 5789999999999999999998 44553
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.6e-09 Score=101.58 Aligned_cols=136 Identities=11% Similarity=0.023 Sum_probs=92.9
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.....+.||+.++++.+++ + ++++|+|.+ ....+...++. ++....+++. .. +..+..|.
T Consensus 116 ~~~~~~~~~~~~~l~~l~~-~---~~~~i~s~~-~~~~~~~~l~~~g~~f~~~~~~-----------~~---~~~~kp~~ 176 (254)
T 3umc_A 116 WHRLRPWPDTLAGMHALKA-D---YWLAALSNG-NTALMLDVARHAGLPWDMLLCA-----------DL---FGHYKPDP 176 (254)
T ss_dssp GGSCEECTTHHHHHHHHTT-T---SEEEECCSS-CHHHHHHHHHHHTCCCSEECCH-----------HH---HTCCTTSH
T ss_pred HhcCCCCccHHHHHHHHHh-c---CeEEEEeCC-CHHHHHHHHHHcCCCcceEEee-----------cc---cccCCCCH
Confidence 3467889999999999986 3 789999988 47777777766 6531122221 11 12344578
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhHHhHHhhhcCCCCccc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWK 541 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~~~ 541 (563)
..++.+++..+.+ +..+++|||+.+|+.|+..||+++++...+. ..|. .......
T Consensus 177 ~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~------~~g~------------------~~~~~l~ 231 (254)
T 3umc_A 177 QVYLGACRLLDLP-PQEVMLCAAHNYDLKAARALGLKTAFIARPL------EYGP------------------GQSQDLA 231 (254)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTT------TTCT------------------TCCSSSS
T ss_pred HHHHHHHHHcCCC-hHHEEEEcCchHhHHHHHHCCCeEEEEecCC------ccCC------------------CCCcccc
Confidence 8999999888874 5889999999999999999999888765420 1110 0000000
Q ss_pred cccCeEEEeCCHHHHHHhHhC
Q 008499 542 EKSGILYTVSSWAEVHAFILG 562 (563)
Q Consensus 542 ~~~~~ly~~~~W~~i~~~~~~ 562 (563)
...+.-|.+++..|+..+|.|
T Consensus 232 ~~~~ad~v~~~l~el~~~l~~ 252 (254)
T 3umc_A 232 AEQDWDLIASDLLDLHRQLAA 252 (254)
T ss_dssp CSSCCSEEESSHHHHHHHHHC
T ss_pred cCCCCcEEECCHHHHHHHhcc
Confidence 123456889999999988765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.1e-09 Score=100.47 Aligned_cols=101 Identities=11% Similarity=0.038 Sum_probs=76.4
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
.....+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. ..+++.+ ....+..
T Consensus 95 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp 156 (233)
T 3umb_A 95 YACLSAFPENVPVLRQLREMG---LPLGILSNG-NPQMLEIAVKSAGMSGLFDHVLSVD--------------AVRLYKT 156 (233)
T ss_dssp HHSCEECTTHHHHHHHHHTTT---CCEEEEESS-CHHHHHHHHHTTTCTTTCSEEEEGG--------------GTTCCTT
T ss_pred HhcCCCCCCHHHHHHHHHhCC---CcEEEEeCC-CHHHHHHHHHHCCcHhhcCEEEEec--------------ccCCCCc
Confidence 346889999999999999988 999999998 57788888876 5532 2222221 1112233
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
|...++.+++..+.+ +.++++||||.+|+.|+..+|+++++.
T Consensus 157 ~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~v 198 (233)
T 3umb_A 157 APAAYALAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFWI 198 (233)
T ss_dssp SHHHHTHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 567788888887764 578999999999999999999987774
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=7e-09 Score=103.42 Aligned_cols=116 Identities=10% Similarity=0.142 Sum_probs=82.9
Q ss_pred CCCHHHHHHHhc-------cCCCCchHHHHHHHHHHcCCCCC--cEEEEccccChHhhHHHHhC-CCCc--ceEEeeccE
Q 008499 373 GINLEDIKKAGE-------RLSLQDGCTTFFQKVVKNENLNA--NVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFS 440 (563)
Q Consensus 373 Gi~~~~i~~~~~-------~i~lrpG~~efl~~l~~~g~~~~--~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~ 440 (563)
|++.+++.+... .+.+.||+.++++.++++| + ++.|+|.+ ....++..++. ++.. ..+++.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g---~~~~l~i~Tn~-~~~~~~~~l~~~gl~~~fd~v~~~~~- 195 (282)
T 3nuq_A 121 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSG---KIDKLWLFTNA-YKNHAIRCLRLLGIADLFDGLTYCDY- 195 (282)
T ss_dssp SSCHHHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSS---SCSEEEEECSS-CHHHHHHHHHHHTCTTSCSEEECCCC-
T ss_pred CCCHHHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCC---CCceEEEEECC-ChHHHHHHHHhCCcccccceEEEecc-
Confidence 445555555432 3678999999999999998 9 99999998 47788887776 6532 12222110
Q ss_pred ecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 441 FKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 441 ~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.+ .....+..|...++.+++..+.+...++++||||.+|+.|+..||+|++++
T Consensus 196 ------~~---~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~ 248 (282)
T 3nuq_A 196 ------SR---TDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH 248 (282)
T ss_dssp ------SS---CSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred ------CC---CcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 01 111234457889999999888742278999999999999999999976665
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.03 E-value=6.3e-09 Score=100.79 Aligned_cols=110 Identities=13% Similarity=0.071 Sum_probs=79.1
Q ss_pred CHHHHHHH---hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcc
Q 008499 375 NLEDIKKA---GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEI 450 (563)
Q Consensus 375 ~~~~i~~~---~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~ 450 (563)
+.+.+..+ ...+.+.||+.++++.++++ +++.|+|.+ ....++..++. ++. |+ .+.++..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~i~t~~-~~~~~~~~l~~~~~~----------f~-~~~~~~~ 164 (254)
T 3umg_A 101 DSGELDELARAWHVLTPWPDSVPGLTAIKAE----YIIGPLSNG-NTSLLLDMAKNAGIP----------WD-VIIGSDI 164 (254)
T ss_dssp CHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH----SEEEECSSS-CHHHHHHHHHHHTCC----------CS-CCCCHHH
T ss_pred CHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC----CeEEEEeCC-CHHHHHHHHHhCCCC----------ee-EEEEcCc
Confidence 44444443 34678899999999999973 689999987 57778777766 553 11 1111111
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+..+..|...++.+++..+.+ +.++++||||.||+.|++.||+++++...
T Consensus 165 ---~~~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 214 (254)
T 3umg_A 165 ---NRKYKPDPQAYLRTAQVLGLH-PGEVMLAAAHNGDLEAAHATGLATAFILR 214 (254)
T ss_dssp ---HTCCTTSHHHHHHHHHHTTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred ---CCCCCCCHHHHHHHHHHcCCC-hHHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence 112334678899999888874 58899999999999999999998777644
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.4e-09 Score=100.45 Aligned_cols=102 Identities=19% Similarity=0.317 Sum_probs=74.8
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. ..+++.+ ....+..|
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g---~~~~i~T~~-~~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~Kp~ 161 (231)
T 3kzx_A 100 DNFMLNDGAIELLDTLKENN---ITMAIVSNK-NGERLRSEIHHKNLTHYFDSIIGSG--------------DTGTIKPS 161 (231)
T ss_dssp CCCEECTTHHHHHHHHHHTT---CEEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEET--------------SSSCCTTS
T ss_pred ccceECcCHHHHHHHHHHCC---CeEEEEECC-CHHHHHHHHHHCCchhheeeEEccc--------------ccCCCCCC
Confidence 36789999999999999998 999999988 47778888776 5532 1222221 11122335
Q ss_pred HHHHHHHHHHhCCCCCc-cEEEEcCCcCchHHhhhcCc-cEEEcCC
Q 008499 461 VQAFNNTLEKYGTDRKN-LSVYIGDSVGDLLCLLEADI-GIVIGSS 504 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~-~viyiGDs~~Dl~~l~~Ad~-givi~~~ 504 (563)
...++.+++..+.. +. .+++||||.+|+.|++.||+ +|.+++.
T Consensus 162 ~~~~~~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~ 206 (231)
T 3kzx_A 162 PEPVLAALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYGST 206 (231)
T ss_dssp SHHHHHHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred hHHHHHHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence 57788888888764 45 89999999999999999997 6666533
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.00 E-value=6e-09 Score=100.40 Aligned_cols=95 Identities=17% Similarity=0.108 Sum_probs=72.8
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. ..+++. . .+..+..|
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~-----------~---~~~~~kp~ 162 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAG---FRLAMATSK-VEKAARAIAELTGLDTRLTVIAGD-----------D---SVERGKPH 162 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTT---EEEEEECSS-CHHHHHHHHHHHTGGGTCSEEECT-----------T---TSSSCTTS
T ss_pred cCCccCCCHHHHHHHHHhCC---CcEEEEcCC-ChHHHHHHHHHcCchhheeeEEeC-----------C---CCCCCCCC
Confidence 56789999999999999998 999999988 47778888776 5421 122221 1 11223456
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
...++.+++..+.+ +.++++||||.+|+.|+..||+
T Consensus 163 ~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~ 198 (237)
T 4ex6_A 163 PDMALHVARGLGIP-PERCVVIGDGVPDAEMGRAAGM 198 (237)
T ss_dssp SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCC
Confidence 78888888888764 5789999999999999999998
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=9.3e-09 Score=99.62 Aligned_cols=100 Identities=13% Similarity=0.137 Sum_probs=74.5
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.+.||+.++++.++++| ++++|+|.+ ....++..++. |+.. ..+++.+ ....+..
T Consensus 101 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp 162 (240)
T 2no4_A 101 YKELSAYPDAAETLEKLKSAG---YIVAILSNG-NDEMLQAALKASKLDRVLDSCLSAD--------------DLKIYKP 162 (240)
T ss_dssp HHTCCBCTTHHHHHHHHHHTT---CEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGG--------------GTTCCTT
T ss_pred HhcCCCCCCHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHhcCcHHHcCEEEEcc--------------ccCCCCC
Confidence 346789999999999999998 999999988 57778888776 5532 1222221 1112334
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
|...++.+++..+.+ +.++++||||.+|+.|+..||+.++.
T Consensus 163 ~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 163 DPRIYQFACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp SHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 667888888877763 57899999999999999999986544
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.5e-09 Score=101.19 Aligned_cols=107 Identities=14% Similarity=0.190 Sum_probs=77.9
Q ss_pred HhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc
Q 008499 382 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 382 ~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
......+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. .+.+.. +.++. ...+..|
T Consensus 65 ~~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~~l~~--~f~~~~-----i~~~~----~~~~kp~ 129 (205)
T 3m9l_A 65 LAQGSRPAPGAVELVRELAGRG---YRLGILTRN-ARELAHVTLEAIGLAD--CFAEAD-----VLGRD----EAPPKPH 129 (205)
T ss_dssp HEEEEEECTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTCGG--GSCGGG-----EECTT----TSCCTTS
T ss_pred HhhcCCCCccHHHHHHHHHhcC---CeEEEEeCC-chHHHHHHHHHcCchh--hcCcce-----EEeCC----CCCCCCC
Confidence 3456789999999999999998 999999998 47788888776 5521 111111 11111 1123345
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCC
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS 504 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~ 504 (563)
...++.+++..+.+ ..++++||||.+|+.|+..||+ +|+++..
T Consensus 130 ~~~~~~~~~~~g~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~ 173 (205)
T 3m9l_A 130 PGGLLKLAEAWDVS-PSRMVMVGDYRFDLDCGRAAGTRTVLVNLP 173 (205)
T ss_dssp SHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEECSSS
T ss_pred HHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCEEEEEeCC
Confidence 67888888888764 5789999999999999999999 8888644
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-08 Score=97.87 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=74.5
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. ..+++.+ . ...+..|
T Consensus 92 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~-----------~---~~~~Kp~ 153 (232)
T 1zrn_A 92 LRLAPFSEVPDSLRELKRRG---LKLAILSNG-SPQSIDAVVSHAGLRDGFDHLLSVD-----------P---VQVYKPD 153 (232)
T ss_dssp GGCEECTTHHHHHHHHHHTT---CEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEESG-----------G---GTCCTTS
T ss_pred ccCCCCccHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHhcChHhhhheEEEec-----------c---cCCCCCC
Confidence 45788999999999999998 999999998 57778888776 5431 1222221 0 1122345
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
...++.+++..+.+ +.++++||||.+|+.|+..||+++++.
T Consensus 154 ~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~ 194 (232)
T 1zrn_A 154 NRVYELAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWI 194 (232)
T ss_dssp HHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 67788888877763 578999999999999999999976664
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-08 Score=95.85 Aligned_cols=122 Identities=14% Similarity=0.128 Sum_probs=82.7
Q ss_pred CHHHHHHH-hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcc
Q 008499 375 NLEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEI 450 (563)
Q Consensus 375 ~~~~i~~~-~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~ 450 (563)
..+.+.+. .+...+.||+.++++.++++| +++|+|.+ +...++..++. ++.. ..+++.. .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~~~i~s~~-~~~~~~~~l~~~~~~~~f~~~~~~~-----------~ 136 (200)
T 3cnh_A 73 TPEDFRAVMEEQSQPRPEVLALARDLGQRY----RMYSLNNE-GRDLNEYRIRTFGLGEFLLAFFTSS-----------A 136 (200)
T ss_dssp CHHHHHHHHHHTCCBCHHHHHHHHHHTTTS----EEEEEECC-CHHHHHHHHHHHTGGGTCSCEEEHH-----------H
T ss_pred CHHHHHHHHHhcCccCccHHHHHHHHHHcC----CEEEEeCC-cHHHHHHHHHhCCHHHhcceEEeec-----------c
Confidence 44444443 446679999999999998654 89999988 57778877765 5421 1222211 0
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE-cCChhHHHHHHhhCC
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI-GSSSSLRRVGSQFGV 516 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi-~~~~~L~~~~~~~gi 516 (563)
...+.-+...++.+++..+.+ +.++++||||.+|+.|+..||+.++. .....+.+..++.|+
T Consensus 137 ---~~~~Kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~~~g~ 199 (200)
T 3cnh_A 137 ---LGVMKPNPAMYRLGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELAALGV 199 (200)
T ss_dssp ---HSCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTC
T ss_pred ---cCCCCCCHHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHHHhcc
Confidence 011222456777777777763 57899999999999999999996555 444566666666665
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=3.7e-08 Score=94.45 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=75.7
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++ +| ++++|+|.+ ....++..++. ++.. ..+++.+ ....+..|
T Consensus 104 ~~~~~~~~~~~~l~~l~-~g---~~~~i~sn~-~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~ 164 (240)
T 3qnm_A 104 TKSGLMPHAKEVLEYLA-PQ---YNLYILSNG-FRELQSRKMRSAGVDRYFKKIILSE--------------DLGVLKPR 164 (240)
T ss_dssp GCCCBSTTHHHHHHHHT-TT---SEEEEEECS-CHHHHHHHHHHHTCGGGCSEEEEGG--------------GTTCCTTS
T ss_pred hcCCcCccHHHHHHHHH-cC---CeEEEEeCC-chHHHHHHHHHcChHhhceeEEEec--------------cCCCCCCC
Confidence 35789999999999999 78 999999988 47777777766 5532 1222211 11223346
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEEcCC
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi~~~ 504 (563)
...++.+++..+.+ +.++++||||. +|+.|+..||+++++.+.
T Consensus 165 ~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~ 208 (240)
T 3qnm_A 165 PEIFHFALSATQSE-LRESLMIGDSWEADITGAHGVGMHQAFYNV 208 (240)
T ss_dssp HHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHcCCeEEEEcC
Confidence 78889999888764 58999999995 999999999998777644
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.7e-08 Score=96.26 Aligned_cols=95 Identities=12% Similarity=0.104 Sum_probs=73.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|.+ ....++..++. ++.. ..+++.+ ....+..|.
T Consensus 84 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~~ 145 (226)
T 3mc1_A 84 ENKVYDGIEALLSSLKDYG---FHLVVATSK-PTVFSKQILEHFKLAFYFDAIVGSS--------------LDGKLSTKE 145 (226)
T ss_dssp SCCBCTTHHHHHHHHHHHT---CEEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEEC--------------TTSSSCSHH
T ss_pred cCccCcCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHhCCHhheeeeeccC--------------CCCCCCCCH
Confidence 5689999999999999998 999999998 47778888776 5532 1222221 112244588
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..++.+++..+.+ +.++++||||.||+.|++.||+.
T Consensus 146 ~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~ 181 (226)
T 3mc1_A 146 DVIRYAMESLNIK-SDDAIMIGDREYDVIGALKNNLP 181 (226)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHTTTCC
T ss_pred HHHHHHHHHhCcC-cccEEEECCCHHHHHHHHHCCCC
Confidence 8999999988874 46999999999999999999983
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.94 E-value=5.9e-08 Score=95.04 Aligned_cols=146 Identities=11% Similarity=0.072 Sum_probs=93.0
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
..+.+.||+.++++.++ | +++.|+|.+ +...++..++. ++.. ..+++.+ . +..+..|
T Consensus 90 ~~~~~~~~~~~~l~~l~--g---~~~~i~t~~-~~~~~~~~l~~~gl~~~f~~~~~~~-----------~---~~~~Kp~ 149 (253)
T 1qq5_A 90 NRLTPYPDAAQCLAELA--P---LKRAILSNG-APDMLQALVANAGLTDSFDAVISVD-----------A---KRVFKPH 149 (253)
T ss_dssp GSCCBCTTHHHHHHHHT--T---SEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGG-----------G---GTCCTTS
T ss_pred hcCCCCccHHHHHHHHc--C---CCEEEEeCc-CHHHHHHHHHHCCchhhccEEEEcc-----------c---cCCCCCC
Confidence 35789999999999998 7 899999998 57788887776 5431 1222211 1 1123346
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC---hhHHHHHHhhCCeeeecCchhHHhHHhhhcCCC
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS---SSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSS 537 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~---~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~ 537 (563)
...++.+++..+.+ +.++++||||.+|+.|++.||+++++... ..|++..+ .-++|-..+.-+.. ...
T Consensus 150 ~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~---~g~~~~~~~~~~~~-----~~~ 220 (253)
T 1qq5_A 150 PDSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELV---SGTIAPLTMFKALR-----MRE 220 (253)
T ss_dssp HHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTT---SSSCCHHHHHHHHH-----SSC
T ss_pred HHHHHHHHHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcc---cccccccccccccc-----ccc
Confidence 67888888887763 57899999999999999999997666543 33443333 22333321110000 000
Q ss_pred CccccccCeEEEeCCHHHHHHhH
Q 008499 538 SNWKEKSGILYTVSSWAEVHAFI 560 (563)
Q Consensus 538 ~~~~~~~~~ly~~~~W~~i~~~~ 560 (563)
.. ...+.-|.+.++.++..+|
T Consensus 221 ~~--~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 221 ET--YAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp CT--TSCCCSEEESSGGGHHHHH
T ss_pred CC--CCCCCCeeeCCHHHHHHHH
Confidence 00 1123457889999988776
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.7e-08 Score=97.57 Aligned_cols=100 Identities=11% Similarity=0.122 Sum_probs=75.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. ..+++.+ ....+..|.
T Consensus 108 ~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~~ 169 (240)
T 3sd7_A 108 ENKIYENMKEILEMLYKNG---KILLVATSK-PTVFAETILRYFDIDRYFKYIAGSN--------------LDGTRVNKN 169 (240)
T ss_dssp CCEECTTHHHHHHHHHHTT---CEEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEEC--------------TTSCCCCHH
T ss_pred ccccCccHHHHHHHHHHCC---CeEEEEeCC-cHHHHHHHHHHcCcHhhEEEEEecc--------------ccCCCCCCH
Confidence 5689999999999999998 999999998 47788888776 5532 1222221 112234578
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
..++.+++..+.+.+.++++||||.+|+.|+..||+. +.+.
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 211 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVL 211 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEe
Confidence 8899999888874257899999999999999999984 3443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.90 E-value=7.5e-09 Score=98.23 Aligned_cols=100 Identities=16% Similarity=0.126 Sum_probs=73.2
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| ++++|+|.+ ....++..+.. ++.. ..+++.+ . ...+..|
T Consensus 91 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~~~~~~~~~~~~~~-----------~---~~~~kp~ 152 (226)
T 1te2_A 91 ETRPLLPGVREAVALCKEQG---LLVGLASAS-PLHMLEKVLTMFDLRDSFDALASAE-----------K---LPYSKPH 152 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHTT---CEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEECT-----------T---SSCCTTS
T ss_pred ccCCcCccHHHHHHHHHHCC---CcEEEEeCC-cHHHHHHHHHhcCcHhhCcEEEecc-----------c---cCCCCCC
Confidence 35688999999999999988 999999987 57777777765 5421 1122111 0 1111224
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
...++.+++..+.+ ..++++||||.||+.|++.||+++++.
T Consensus 153 ~~~~~~~~~~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~~ 193 (226)
T 1te2_A 153 PQVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVV 193 (226)
T ss_dssp THHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEEE
Confidence 67888888887764 578999999999999999999988773
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.7e-08 Score=96.64 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=71.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| +++.|+|.+ .. .+...|+. |+.. ..+++.. .+..+.-|.
T Consensus 104 ~~~~~~~~~~~l~~l~~~g---~~~~i~tn~-~~-~~~~~l~~~gl~~~f~~~~~~~--------------~~~~~Kp~~ 164 (263)
T 3k1z_A 104 TWQVLDGAEDTLRECRTRG---LRLAVISNF-DR-RLEGILGGLGLREHFDFVLTSE--------------AAGWPKPDP 164 (263)
T ss_dssp GEEECTTHHHHHHHHHHTT---CEEEEEESC-CT-THHHHHHHTTCGGGCSCEEEHH--------------HHSSCTTSH
T ss_pred cceECcCHHHHHHHHHhCC---CcEEEEeCC-cH-HHHHHHHhCCcHHhhhEEEeec--------------ccCCCCCCH
Confidence 3578999999999999998 999999976 33 46777765 5521 1122211 011223356
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEEc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi~ 502 (563)
..+..+++..+.+ +..+++||||. +|+.|+..||+++++.
T Consensus 165 ~~~~~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~ 205 (263)
T 3k1z_A 165 RIFQEALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLV 205 (263)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEE
T ss_pred HHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEE
Confidence 7788888877764 57899999997 9999999999976665
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.7e-09 Score=97.52 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=74.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. ..+++.+- ...+..|..
T Consensus 88 ~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~~--------------~~~~kp~~~ 149 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQG---LEIGLASSS-VKADIFRALEENRLQGFFDIVLSGEE--------------FKESKPNPE 149 (214)
T ss_dssp HHBCTTHHHHHHHHHHTT---CEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGGG--------------CSSCTTSSH
T ss_pred CCcCchHHHHHHHHHHCC---CCEEEEeCC-cHHHHHHHHHHcCcHhheeeEeeccc--------------ccCCCCChH
Confidence 468999999999999998 999999988 57788888876 5532 12222210 111223567
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 503 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~ 503 (563)
.++.+++..+.+ +.++++||||.+|+.|+..||+++++..
T Consensus 150 ~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 189 (214)
T 3e58_A 150 IYLTALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIR 189 (214)
T ss_dssp HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEEC
Confidence 788888887763 5789999999999999999999766643
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.88 E-value=6.9e-09 Score=100.76 Aligned_cols=103 Identities=16% Similarity=0.091 Sum_probs=70.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
...+.||+.++++.++++| +++.|+|.+. ...+...+..++.. .++++. +.++. .+..+..|...+
T Consensus 107 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~l~~--~f~~d~-----i~~~~---~~~~~kp~~~~~ 172 (243)
T 3qxg_A 107 EAERMPGAWELLQKVKSEG---LTPMVVTGSG-QLSLLERLEHNFPG--MFHKEL-----MVTAF---DVKYGKPNPEPY 172 (243)
T ss_dssp CCCBCTTHHHHHHHHHHTT---CEEEEECCCC-CHHHHTTHHHHSTT--TCCGGG-----EECTT---TCSSCTTSSHHH
T ss_pred cCCCCCCHHHHHHHHHHcC---CcEEEEeCCc-HHHHHHHHHHhHHH--hcCcce-----EEeHH---hCCCCCCChHHH
Confidence 4688999999999999998 9999999873 45555555432211 111111 11111 112233456788
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
+.+++..+.+ +.++++||||.+|+.|++.||++ |.+.
T Consensus 173 ~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 210 (243)
T 3qxg_A 173 LMALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVN 210 (243)
T ss_dssp HHHHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEe
Confidence 8888888764 57899999999999999999984 4444
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-09 Score=100.84 Aligned_cols=100 Identities=12% Similarity=0.061 Sum_probs=74.3
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| +++.|+|.+ +...++..++. ++.. ..+++.+ .+..+..|
T Consensus 80 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~Kp~ 141 (222)
T 2nyv_A 80 VYTKPYPEIPYTLEALKSKG---FKLAVVSNK-LEELSKKILDILNLSGYFDLIVGGD--------------TFGEKKPS 141 (222)
T ss_dssp SSCEECTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECTT--------------SSCTTCCT
T ss_pred ccCccCCCHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCCHHHheEEEecC--------------cCCCCCCC
Confidence 35788999999999999998 999999988 57778888776 5531 1222221 01122346
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
...+..+++..+.+ +.++++||||.+|+.|+..||++ |.+.
T Consensus 142 ~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 142 PTPVLKTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp THHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred hHHHHHHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 67788888877763 57899999999999999999986 5554
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.86 E-value=5.5e-08 Score=95.63 Aligned_cols=99 Identities=11% Similarity=0.038 Sum_probs=73.3
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
...+.||+.++++.++++| +++.|+|.+ ....++..++. ++.. ..+++.+ .+..+..|
T Consensus 109 ~~~~~~~~~~~l~~l~~~g---~~~~i~tn~-~~~~~~~~l~~~~~~~~~~~~~~~~~--------------~~~~~kp~ 170 (277)
T 3iru_A 109 RSQLIPGWKEVFDKLIAQG---IKVGGNTGY-GPGMMAPALIAAKEQGYTPASTVFAT--------------DVVRGRPF 170 (277)
T ss_dssp TCCBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHHHTTCCCSEEECGG--------------GSSSCTTS
T ss_pred cCccCcCHHHHHHHHHHcC---CeEEEEeCC-chHHHHHHHHhcCcccCCCceEecHH--------------hcCCCCCC
Confidence 5789999999999999998 999999987 57777777765 3211 1222211 12233456
Q ss_pred HHHHHHHHHHhCCCCC-ccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 461 VQAFNNTLEKYGTDRK-NLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~-~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
...++.+++..+.+ + .++++||||.+|+.|+..||++ |.+.
T Consensus 171 ~~~~~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~ 213 (277)
T 3iru_A 171 PDMALKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVS 213 (277)
T ss_dssp SHHHHHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 78888888888874 5 7899999999999999999974 4443
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.86 E-value=7.2e-08 Score=94.10 Aligned_cols=98 Identities=12% Similarity=0.156 Sum_probs=71.3
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|++ ....++..++. ++.. ..+++.+ . .....-|.
T Consensus 112 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~gl~~~f~~~~~~~-----------~---~~~~Kp~~ 173 (243)
T 2hsz_A 112 ISRLYPNVKETLEALKAQG---YILAVVTNK-PTKHVQPILTAFGIDHLFSEMLGGQ-----------S---LPEIKPHP 173 (243)
T ss_dssp SCEECTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECTT-----------T---SSSCTTSS
T ss_pred cCccCCCHHHHHHHHHHCC---CEEEEEECC-cHHHHHHHHHHcCchheEEEEEecc-----------c---CCCCCcCH
Confidence 5678999999999999998 999999998 57778888776 5532 1222211 0 01111245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
..+..+++..+.. +.++++||||.+|+.|+..||++++.
T Consensus 174 ~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~ 212 (243)
T 2hsz_A 174 APFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVG 212 (243)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence 6777777777763 57899999999999999999997444
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-08 Score=97.94 Aligned_cols=103 Identities=13% Similarity=0.104 Sum_probs=69.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
...+.||+.++++.++++| +++.|+|.+ ....+...+..++.. .++++..+ ++. .+..+..|...+
T Consensus 106 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~l~~--~f~~~~~~-----~~~---~~~~~kp~~~~~ 171 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEG---LTPMVVTGS-GQTSLLDRLNHNFPG--IFQANLMV-----TAF---DVKYGKPNPEPY 171 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTT---CEEEEECSC-C---CHHHHHHHSTT--TCCGGGEE-----CGG---GCSSCTTSSHHH
T ss_pred cCCCCCCHHHHHHHHHHcC---CcEEEEcCC-chHHHHHHHHhhHHH--hcCCCeEE-----ecc---cCCCCCCCCHHH
Confidence 4688999999999999998 999999988 456666666543321 11111111 111 112233466788
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
+.+++..+.+ +..+++||||.+|+.|++.||++ |.+.
T Consensus 172 ~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 209 (247)
T 3dv9_A 172 LMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVN 209 (247)
T ss_dssp HHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 8888888763 57899999999999999999985 4444
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.85 E-value=3.4e-08 Score=93.58 Aligned_cols=99 Identities=13% Similarity=0.037 Sum_probs=72.7
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| +++.|+|.+ ....+...+.. ++.. ..+++.+ . ...+..|
T Consensus 86 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~k~~ 147 (225)
T 3d6j_A 86 ANTILFPDTLPTLTHLKKQG---IRIGIISTK-YRFRILSFLRNHMPDDWFDIIIGGE-----------D---VTHHKPD 147 (225)
T ss_dssp GGCEECTTHHHHHHHHHHHT---CEEEEECSS-CHHHHHHHHHTSSCTTCCSEEECGG-----------G---CSSCTTS
T ss_pred ccCccCcCHHHHHHHHHHCC---CeEEEEECC-CHHHHHHHHHHcCchhheeeeeehh-----------h---cCCCCCC
Confidence 35678899999999999988 999999987 57778887776 5431 1222211 1 1122235
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
...+..+++..+.+ ..++++||||.||+.|++.||+++++
T Consensus 148 ~~~~~~~~~~~~~~-~~~~i~iGD~~nDi~~~~~aG~~~~~ 187 (225)
T 3d6j_A 148 PEGLLLAIDRLKAC-PEEVLYIGDSTVDAGTAAAAGVSFTG 187 (225)
T ss_dssp THHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred hHHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 57788888887764 57899999999999999999997665
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.85 E-value=2.6e-08 Score=92.42 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=71.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc--eEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL--NVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+.||+.++++.++++| ++++|+|.+ ...++..++. ++... .+++ +. .+..+..|..
T Consensus 81 ~~~~~~~~~~l~~l~~~g---~~~~i~t~~--~~~~~~~l~~~~~~~~f~~~~~-----------~~---~~~~~kp~~~ 141 (190)
T 2fi1_A 81 PILFEGVSDLLEDISNQG---GRHFLVSHR--NDQVLEILEKTSIAAYFTEVVT-----------SS---SGFKRKPNPE 141 (190)
T ss_dssp CCBCTTHHHHHHHHHHTT---CEEEEECSS--CTHHHHHHHHTTCGGGEEEEEC-----------GG---GCCCCTTSCH
T ss_pred CccCcCHHHHHHHHHHCC---CcEEEEECC--cHHHHHHHHHcCCHhheeeeee-----------cc---ccCCCCCCHH
Confidence 348999999999999998 999999976 3466777665 54321 1221 11 1112334667
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHH
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRR 509 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~ 509 (563)
.++.+++..+.+ ++++||||.||+.|+..||++++.. ....+++
T Consensus 142 ~~~~~~~~~~~~---~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~ 186 (190)
T 2fi1_A 142 SMLYLREKYQIS---SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQ 186 (190)
T ss_dssp HHHHHHHHTTCS---SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHH
T ss_pred HHHHHHHHcCCC---eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhh
Confidence 888888887763 8999999999999999999976654 3344443
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-07 Score=91.09 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=71.5
Q ss_pred HhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCC
Q 008499 382 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 382 ~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
..+...+.||+.++++.++++ +++.|+|.+ ....++..++. ++.. ..+++.+ . ...+.
T Consensus 95 ~~~~~~~~~~~~~~l~~l~~~----~~~~i~t~~-~~~~~~~~l~~~~~~~~f~~~~~~~-----------~---~~~~k 155 (234)
T 3u26_A 95 SQRYGELYPEVVEVLKSLKGK----YHVGMITDS-DTEQAMAFLDALGIKDLFDSITTSE-----------E---AGFFK 155 (234)
T ss_dssp HHHHCCBCTTHHHHHHHHTTT----SEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEHH-----------H---HTBCT
T ss_pred HHhhCCcCcCHHHHHHHHHhC----CcEEEEECC-CHHHHHHHHHHcCcHHHcceeEecc-----------c---cCCCC
Confidence 344678899999999999753 789999988 57777777765 5431 1222211 0 11123
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEE
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI 501 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi 501 (563)
.|...++.+++..+.+ +..+++||||. ||+.|+..||++++.
T Consensus 156 p~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~ 198 (234)
T 3u26_A 156 PHPRIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSIL 198 (234)
T ss_dssp TSHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEE
T ss_pred cCHHHHHHHHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEE
Confidence 4667788888888764 58899999997 999999999985444
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.82 E-value=4.2e-08 Score=92.78 Aligned_cols=109 Identities=10% Similarity=0.096 Sum_probs=74.6
Q ss_pred CCHHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-------CCCc--ceEEeeccEec
Q 008499 374 INLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-------GLNA--LNVHANEFSFK 442 (563)
Q Consensus 374 i~~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-------~l~~--~~I~aN~l~~~ 442 (563)
.+.+++.+... ...+.||+.++++.+++ | ++++|+|.+ ....++..+.. ++.. ..+++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-g---~~~~i~t~~-~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~---- 144 (211)
T 2i6x_A 74 LTYQQVYDALLGFLEEISAEKFDYIDSLRP-D---YRLFLLSNT-NPYVLDLAMSPRFLPSGRTLDSFFDKVYASC---- 144 (211)
T ss_dssp CCHHHHHHHHGGGEEEECHHHHHHHHHHTT-T---SEEEEEECC-CHHHHHHHTSTTSSTTCCCGGGGSSEEEEHH----
T ss_pred CCHHHHHHHHHHhhcccChHHHHHHHHHHc-C---CeEEEEeCC-CHHHHHHHHhhhccccccCHHHHcCeEEeec----
Confidence 45555554332 34788999999999998 7 999999988 47777776653 2211 1111111
Q ss_pred CccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 443 ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 443 ~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
....+..+...++.+++..+.+ +.++++||||.+|+.|+..||++++..
T Consensus 145 ----------~~~~~Kp~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~ 193 (211)
T 2i6x_A 145 ----------QMGKYKPNEDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCP 193 (211)
T ss_dssp ----------HHTCCTTSHHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred ----------ccCCCCCCHHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence 0111223456788888887764 578999999999999999999976665
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.81 E-value=4.8e-09 Score=108.03 Aligned_cols=130 Identities=19% Similarity=0.302 Sum_probs=78.9
Q ss_pred CCCCHHHHHHHhcc-CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEec-------
Q 008499 372 KGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFK------- 442 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~-i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~------- 442 (563)
.|....+..+.... ..+.|++.++++.+++ | +++.|+|++ ...++...... ++. ..++++.+.++
T Consensus 87 nGa~i~~~~~~~~~~~~~~~~~~~~l~~l~~-g---~~~~i~t~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 160 (332)
T 1y8a_A 87 AGVKNRDVERIAELSAKFVPDAEKAMATLQE-R---WTPVVISTS-YTQYLRRTASMIGVR-GELHGTEVDFDSIAVPEG 160 (332)
T ss_dssp TTCCHHHHHHHHHHHCCBCTTHHHHHHHHHT-T---CEEEEEEEE-EHHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHH
T ss_pred CCcEEEECCeEeeccCCCHHHHHHHHHHHHc-C---CcEEEEECC-ceEEEcccchhhhhh-hhhcccccchhhhccccc
Confidence 34333333333344 5789999999999998 8 999999986 24556555443 442 23455544322
Q ss_pred ---------Ccccc-------------------Ccccc--cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHh
Q 008499 443 ---------ESIST-------------------GEIIE--KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL 492 (563)
Q Consensus 443 ---------~g~~t-------------------G~~~~--~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l 492 (563)
++..+ +.+.. ....+.+|...++.+....+ ...+++||||.||++|+
T Consensus 161 ~~k~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~---~~~via~GDs~NDi~ml 237 (332)
T 1y8a_A 161 LREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKG---IDFPVVVGDSISDYKMF 237 (332)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHT---CSSCEEEECSGGGHHHH
T ss_pred cceeEEecCHHHHhhhhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhc---CceEEEEeCcHhHHHHH
Confidence 11111 11110 22234568877775543211 12399999999999999
Q ss_pred hhc----CccEEEcCChhHHHH
Q 008499 493 LEA----DIGIVIGSSSSLRRV 510 (563)
Q Consensus 493 ~~A----d~givi~~~~~L~~~ 510 (563)
..| |+||++.+.+.+++.
T Consensus 238 ~~A~~~~g~~vamna~~~lk~~ 259 (332)
T 1y8a_A 238 EAARGLGGVAIAFNGNEYALKH 259 (332)
T ss_dssp HHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHhhcCCeEEEecCCHHHHhh
Confidence 999 999999555555543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.81 E-value=4.9e-08 Score=95.65 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=74.9
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ce-EEeeccEecCccccCcccccCC-CCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LN-VHANEFSFKESISTGEIIEKVE-SPI 458 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~-I~aN~l~~~~g~~tG~~~~~~~-~g~ 458 (563)
....+.||+.++++.++++| ++++|+|.+ ....++..++. ++.. .. +++.+ ... .+.
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~i~~~~--------------~~~~~~K 168 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAG---VPFAIGSNS-ERGRLHLKLRVAGLTELAGEHIYDPS--------------WVGGRGK 168 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHT---CCEEEECSS-CHHHHHHHHHHTTCHHHHCSCEECGG--------------GGTTCCT
T ss_pred ccCCcCccHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHhcChHhhccceEEeHh--------------hcCcCCC
Confidence 56789999999999999998 999999988 57788888776 5421 11 22211 111 233
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
.|...++.+++..+.+ +.++++||||.+|+.|++.||++ |.+.
T Consensus 169 p~~~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 212 (259)
T 4eek_A 169 PHPDLYTFAAQQLGIL-PERCVVIEDSVTGGAAGLAAGATLWGLL 212 (259)
T ss_dssp TSSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEC
T ss_pred CChHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCEEEEEc
Confidence 4567888888888764 57899999999999999999996 5454
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=7.1e-08 Score=95.38 Aligned_cols=89 Identities=20% Similarity=0.269 Sum_probs=70.3
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
.++||+.++++.++++| +++.|+|++ ....++..++. |+.. ++ + ...+.+|...++
T Consensus 144 ~~~~~~~~~l~~l~~~g---~~~~i~T~~-~~~~~~~~~~~~gl~~--~f------~-----------~~~~~~k~~~~k 200 (280)
T 3skx_A 144 RIRPESREAISKLKAIG---IKCMMLTGD-NRFVAKWVAEELGLDD--YF------A-----------EVLPHEKAEKVK 200 (280)
T ss_dssp EECTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCSE--EE------C-----------SCCGGGHHHHHH
T ss_pred CCCHhHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCChh--Hh------H-----------hcCHHHHHHHHH
Confidence 68999999999999998 999999998 57777877766 6521 11 1 112236888888
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+.+. ..+++||||.||+.|+..||+||+++..
T Consensus 201 ~~~~~------~~~~~vGD~~nDi~~~~~Ag~~va~~~~ 233 (280)
T 3skx_A 201 EVQQK------YVTAMVGDGVNDAPALAQADVGIAIGAG 233 (280)
T ss_dssp HHHTT------SCEEEEECTTTTHHHHHHSSEEEECSCC
T ss_pred HHHhc------CCEEEEeCCchhHHHHHhCCceEEecCC
Confidence 87753 4689999999999999999999999743
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.2e-08 Score=99.27 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=75.8
Q ss_pred CCCchHHHHHHHHHHc-CCCCCcEEEEcccc--------------------ChHhhHHHHhC-CCCcceEEee-ccEec-
Q 008499 387 SLQDGCTTFFQKVVKN-ENLNANVHVLSYCW--------------------CGDLIRASFSS-GLNALNVHAN-EFSFK- 442 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~-g~~~~~v~IvS~gw--------------------s~~~I~~~L~~-~l~~~~I~aN-~l~~~- 442 (563)
...+++.++++.++++ | +.+.+.|..- ....+...+.. ++. ..+..+ .+..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g---~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~ 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHN---ILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVS-VNINRCNPLAGDP 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSS---CCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEE-EEEEECCGGGTCC
T ss_pred CCHHHHHHHHHHHHhhhC---ceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCC-EEEEEccccccCC
Confidence 6778999999999887 7 7777777430 02334444443 432 122222 11100
Q ss_pred CccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC-hhHHHHH
Q 008499 443 ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG 511 (563)
Q Consensus 443 ~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~-~~L~~~~ 511 (563)
++..++.+. ..+..|...++.+++..+.+ ...+++||||.||+.|+..|++|++++.. +.+++.+
T Consensus 198 ~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~-~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a 263 (289)
T 3gyg_A 198 EDSYDVDFI---PIGTGKNEIVTFMLEKYNLN-TERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLH 263 (289)
T ss_dssp TTEEEEEEE---ESCCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHC
T ss_pred CCceEEEEE---eCCCCHHHHHHHHHHHcCCC-hhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhC
Confidence 012223332 24567999999999988764 57899999999999999999999999744 4555433
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.1e-08 Score=96.47 Aligned_cols=103 Identities=11% Similarity=0.112 Sum_probs=71.3
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCc--ceEEeeccEecCccccCcccccCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNA--LNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
.....+.||+.++++.++++| +++.|+|.+ ....+...+.. ++.. ..+++ +. ...+..+.
T Consensus 108 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~sn~-~~~~~~~~l~~~~~l~~~f~~~~~-----------~~-~~~~~~~K 171 (250)
T 3l5k_A 108 FPTAALMPGAEKLIIHLRKHG---IPFALATSS-RSASFDMKTSRHKEFFSLFSHIVL-----------GD-DPEVQHGK 171 (250)
T ss_dssp GGGCCBCTTHHHHHHHHHHTT---CCEEEECSC-CHHHHHHHTTTCHHHHTTSSCEEC-----------TT-CTTCCSCT
T ss_pred hccCCCCCCHHHHHHHHHhCC---CcEEEEeCC-CHHHHHHHHHhccCHHhheeeEEe-----------cc-hhhccCCC
Confidence 346789999999999999998 999999988 35666665543 2210 11111 11 00111233
Q ss_pred CcHHHHHHHHHHhCCCC-CccEEEEcCCcCchHHhhhcCccEEE
Q 008499 459 DKVQAFNNTLEKYGTDR-KNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~-~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.|...++.+++..+... +.++++||||.+|+.|++.||++++.
T Consensus 172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~ 215 (250)
T 3l5k_A 172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVM 215 (250)
T ss_dssp TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEE
Confidence 45678888888877631 27899999999999999999986554
|
| >3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=8.9e-08 Score=92.15 Aligned_cols=195 Identities=14% Similarity=0.078 Sum_probs=129.3
Q ss_pred HHHHHHHHhHHhHHH--hhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCH-HH---HHHHHHHHH
Q 008499 16 LARRLWIKFKRESVF--AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDD-DA---KLSISELRK 89 (563)
Q Consensus 16 ~~~~lw~~~~~~~~~--~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~-~~---~~~l~~~~~ 89 (563)
++++|=+.....++. ..+|||++.+++|+ .+..+.|++|=+.| .|.++-+++++++. .+ -....++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~hP~l~~~~~a~--~~ql~~f~~Q~s~F----~ryL~~l~~~~~~~l~~~~~~~~~~eL~~ 80 (244)
T 3b5o_A 7 LTKQLNQLLAQDYVAFSITENPVVQMLSQAS--FAQIAYVMQQYSIF----PKELVGFTELARRKALGAGWNGVAQELQE 80 (244)
T ss_dssp HHHHHHHHHHHHCGGGCTTTCTTGGGTTTCC--HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhchhhhhhccCHHHHHHHhcc--HHHHHHHHHHHHHH----HHHHHHHHhhcccccccccchHHHHHHHH
Confidence 455555544333332 36899999999876 44489999999976 55555555544432 11 112344566
Q ss_pred HHHHHH----------HHHHHHHH-HhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHH
Q 008499 90 GVLEEL----------KMHDSFVK-EWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLG 158 (563)
Q Consensus 90 ~i~~E~----------~~h~~~~~-~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 158 (563)
++.+|+ .+++.+++ .+|++++. ..|.|+|++|++=|.+..+.+ +..+++
T Consensus 81 NL~EE~G~~d~~~~H~~lyRr~L~~~lGld~~~-~~p~~sT~~~idt~~~lcs~d-------------------~~~aLG 140 (244)
T 3b5o_A 81 NIDEEMGSTTGGISHYTLLADGLEEGLGVAVKN-TMPSVATSKLLRTVLSLFDRQ-------------------VDYVLG 140 (244)
T ss_dssp HHHHHTTTTTTTCCHHHHHHHHHHHHHCCCCTT-CCCCHHHHHHHHHHHHHHTSC-------------------HHHHHH
T ss_pred HHHHHhCCCCCCCchHHHHHHHHHHhcCCCccc-cCCCchHHHHHHHHHHHhCCC-------------------HHHHHH
Confidence 778886 59999999 99999975 688999999999999988322 357788
Q ss_pred HHHHHH------H-HHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Q 008499 159 AMSPCM------R-LYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQ 231 (563)
Q Consensus 159 Al~pC~------~-~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~ 231 (563)
|++.-+ | +|..+.+.+.+.. . + ..-..+.+.+-.+.-.+..+.+.++++... +.+++.++.+-+++
T Consensus 141 A~yatE~iaipe~~ly~~li~gL~~~~--~-~-~~~l~FF~~HidelE~~Ha~~l~~~l~~~~---~~eef~~~~~G~~~ 213 (244)
T 3b5o_A 141 ATYAIEATSIPELTLIVKLVEWLHEGA--I-P-KDLQYFFSKHLDEWEIEHEAGLRTSVAAYI---QPEEFGEFAAGFRA 213 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSC--C-C-HHHHHHHHHHHC-------CHHHHHHHTTC---CGGGHHHHHHHHHH
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHHhCC--C-c-hhHHHHHHHHhhhhHHHHHHHHHHHHHHHH---hhHhHHHHHHHHHH
Confidence 875544 2 6777777664321 1 1 112345555543333567888899998765 34668999999999
Q ss_pred HHHHHHHhhccC
Q 008499 232 AMKLEVEFFCAQ 243 (563)
Q Consensus 232 ~~~lE~~Fw~~a 243 (563)
++.....||+.-
T Consensus 214 ~Lda~~~fWdgL 225 (244)
T 3b5o_A 214 MIDAMQVWWQEL 225 (244)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999975
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.6e-08 Score=97.09 Aligned_cols=98 Identities=8% Similarity=0.000 Sum_probs=67.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+.||+.++++.++++| +++.|+|.+ . .+...++. ++.. ..+++.+ - +..+.-|..
T Consensus 91 ~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~--~~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~~~ 150 (233)
T 3nas_A 91 EDLLPGIGRLLCQLKNEN---IKIGLASSS-R--NAPKILRRLAIIDDFHAIVDPT-----------T---LAKGKPDPD 150 (233)
T ss_dssp GGSCTTHHHHHHHHHHTT---CEEEECCSC-T--THHHHHHHTTCTTTCSEECCC-----------------------CC
T ss_pred CCcCcCHHHHHHHHHHCC---CcEEEEcCc-h--hHHHHHHHcCcHhhcCEEeeHh-----------h---CCCCCCChH
Confidence 348999999999999998 999999986 2 26666665 5432 1122111 0 111122345
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.++.+++..+.+ +.++++||||.+|+.|++.||+++++.+.
T Consensus 151 ~~~~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~ 191 (233)
T 3nas_A 151 IFLTAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGVGQ 191 (233)
T ss_dssp HHHHHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEECC-
T ss_pred HHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 677777777763 58899999999999999999998888744
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.77 E-value=3.3e-07 Score=88.72 Aligned_cols=98 Identities=10% Similarity=0.124 Sum_probs=72.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| ++++|+|.+ ....++..+.. ++.. ..+++.+ . +..+..|.
T Consensus 92 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~-----------~---~~~~Kp~~ 153 (241)
T 2hoq_A 92 YLREVPGARKVLIRLKELG---YELGIITDG-NPVKQWEKILRLELDDFFEHVIISD-----------F---EGVKKPHP 153 (241)
T ss_dssp HCCBCTTHHHHHHHHHHHT---CEEEEEECS-CHHHHHHHHHHTTCGGGCSEEEEGG-----------G---GTCCTTCH
T ss_pred hCCCCccHHHHHHHHHHCC---CEEEEEECC-CchhHHHHHHHcCcHhhccEEEEeC-----------C---CCCCCCCH
Confidence 4678999999999999998 999999987 57777777766 5532 1222211 1 11223356
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi 501 (563)
..++.+++..+.+ +..+++||||. ||+.|++.||++++.
T Consensus 154 ~~~~~~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~ 193 (241)
T 2hoq_A 154 KIFKKALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVW 193 (241)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEE
Confidence 7888888887763 57899999998 999999999996554
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=98.76 E-value=2.1e-08 Score=94.34 Aligned_cols=120 Identities=11% Similarity=0.111 Sum_probs=75.7
Q ss_pred CCHHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCC--cceEEeeccEecCcccc
Q 008499 374 INLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLN--ALNVHANEFSFKESIST 447 (563)
Q Consensus 374 i~~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~--~~~I~aN~l~~~~g~~t 447 (563)
.+.+++.+... ...+.||+.++++.++++| ++++|+|.+ +...++..+.. ++. ...+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~~~~~~~l~~~f~~~~~~~--------- 142 (206)
T 2b0c_A 76 LSYEQFSHGWQAVFVALRPEVIAIMHKLREQG---HRVVVLSNT-NRLHTTFWPEEYPEIRDAADHIYLSQ--------- 142 (206)
T ss_dssp CCHHHHHHHHHTCEEEECHHHHHHHHHHHHTT---CEEEEEECC-CCCTTSCCGGGCHHHHHHCSEEEEHH---------
T ss_pred CCHHHHHHHHHHHhcccCccHHHHHHHHHHCC---CeEEEEECC-ChHHHHHHHHhccChhhheeeEEEec---------
Confidence 45555554433 2678999999999999988 999999987 34443332221 111 01122211
Q ss_pred CcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE-cCChhHHHHHH
Q 008499 448 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI-GSSSSLRRVGS 512 (563)
Q Consensus 448 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi-~~~~~L~~~~~ 512 (563)
.. ..+..+...+..+++..+.+ +..+++||||.+|+.++..+|++++. .+...+++..+
T Consensus 143 --~~---~~~Kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 202 (206)
T 2b0c_A 143 --DL---GMRKPEARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFA 202 (206)
T ss_dssp --HH---TCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHHHH
T ss_pred --cc---CCCCCCHHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHHHHHH
Confidence 00 01112345777777777763 57899999999999999999996554 45555655443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.75 E-value=4.7e-08 Score=90.96 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=70.1
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc--eEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL--NVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| +++.|+|.+ ....+. .++. ++... .+++.. ....+..+
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~-~~~~~~-~~~~~~~~~~f~~~~~~~--------------~~~~~Kp~ 142 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESG---IQQFIYTHK-GNNAFT-ILKDLGVESYFTEILTSQ--------------SGFVRKPS 142 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTT---CEEEEECSS-CTHHHH-HHHHHTCGGGEEEEECGG--------------GCCCCTTS
T ss_pred ccceeCcCHHHHHHHHHHCC---CeEEEEeCC-chHHHH-HHHHcCchhheeeEEecC--------------cCCCCCCC
Confidence 35678999999999999988 999999987 466666 6655 54321 122211 00011123
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
...++.+++..+.+ +.++++||||.||+.|++.||++ ++++
T Consensus 143 ~~~~~~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~ 184 (207)
T 2go7_A 143 PEAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL 184 (207)
T ss_dssp SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS
T ss_pred cHHHHHHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEe
Confidence 56777888777763 57899999999999999999997 5554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.72 E-value=3.7e-07 Score=87.01 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=70.9
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccC---hHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws---~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
.+.||+.++++.++++| +++.|+|.+ . ...++..+.. ++.. ..+++.+ . ...+..|
T Consensus 99 ~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~~~~l~~~~l~~~f~~~~~~~----------~----~~~~kp~ 160 (235)
T 2om6_A 99 LVLEGTKEALQFVKERG---LKTAVIGNV-MFWPGSYTRLLLERFGLMEFIDKTFFAD----------E----VLSYKPR 160 (235)
T ss_dssp GBCTTHHHHHHHHHHTT---CEEEEEECC-CSSCHHHHHHHHHHTTCGGGCSEEEEHH----------H----HTCCTTC
T ss_pred CcCccHHHHHHHHHHCC---CEEEEEcCC-cccchhHHHHHHHhCCcHHHhhhheecc----------c----cCCCCCC
Confidence 46999999999999988 999999986 4 5666666665 5432 1222211 0 0112235
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi~ 502 (563)
...+..+++..+.+ +.++++||||. ||+.|++.||+++++.
T Consensus 161 ~~~~~~~~~~lgi~-~~~~~~iGD~~~nDi~~a~~aG~~~~~~ 202 (235)
T 2om6_A 161 KEMFEKVLNSFEVK-PEESLHIGDTYAEDYQGARKVGMWAVWI 202 (235)
T ss_dssp HHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHcCCC-ccceEEECCChHHHHHHHHHCCCEEEEE
Confidence 67888888888764 57899999999 9999999999987774
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.2e-07 Score=92.17 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=73.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC-cceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN-ALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~-~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
...+.||+.++++.++++| +++.|+|.+ +...++..++. ++. ...+++.+- +..+..|..
T Consensus 108 ~~~~~~g~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~~l~~f~~~~~~~~--------------~~~~Kp~p~ 169 (240)
T 2hi0_A 108 KTGPFPGILDLMKNLRQKG---VKLAVVSNK-PNEAVQVLVEELFPGSFDFALGEKS--------------GIRRKPAPD 169 (240)
T ss_dssp SCEECTTHHHHHHHHHHTT---CEEEEEEEE-EHHHHHHHHHHHSTTTCSEEEEECT--------------TSCCTTSSH
T ss_pred cCCcCCCHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCCcceeEEEecCC--------------CCCCCCCHH
Confidence 4678899999999999998 999999988 46777777776 543 223333221 112334667
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
.+...++..+.+ +.++++||||.+|+.|+..||+. |.+.
T Consensus 170 ~~~~~~~~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~ 209 (240)
T 2hi0_A 170 MTSECVKVLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVN 209 (240)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEC
Confidence 788888877764 58899999999999999999984 4443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=98.70 E-value=2e-07 Score=89.63 Aligned_cols=115 Identities=13% Similarity=0.072 Sum_probs=75.9
Q ss_pred CCHHHHHHHhccC--CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHH------hC-CCCc--ceEEeeccEec
Q 008499 374 INLEDIKKAGERL--SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASF------SS-GLNA--LNVHANEFSFK 442 (563)
Q Consensus 374 i~~~~i~~~~~~i--~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L------~~-~l~~--~~I~aN~l~~~ 442 (563)
.+.+++.+..... .+.||+.++++.++++ ++++|+|.+ +...++.++ .. ++.. ..+++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~i~Sn~-~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~---- 167 (229)
T 4dcc_A 97 VSDKQIDAAWNSFLVDIPTYKLDLLLKLREK----YVVYLLSNT-NDIHWKWVCKNAFPYRTFKVEDYFEKTYLSY---- 167 (229)
T ss_dssp CCHHHHHHHHHTTBCCCCHHHHHHHHHHTTT----SEEEEEECC-CHHHHHHHHHHTSCBTTBCHHHHCSEEEEHH----
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHhc----CcEEEEECC-ChHHHHHHHhhhhhhccCCHHHhCCEEEeec----
Confidence 4666776655433 5789999999999853 799999988 576766443 32 3211 1122111
Q ss_pred CccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHH
Q 008499 443 ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLR 508 (563)
Q Consensus 443 ~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~ 508 (563)
....+--+...++.+++..+.+ +.++++||||.+|+.++..||++++.. +...++
T Consensus 168 ----------~~~~~KP~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 168 ----------EMKMAKPEPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp ----------HHTCCTTCHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred ----------ccCCCCCCHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 0111122447788888888764 588999999999999999999975554 444444
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.70 E-value=6.9e-07 Score=84.79 Aligned_cols=95 Identities=12% Similarity=0.033 Sum_probs=72.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| .+++.|+|.+ ....++..++. ++.. ..+++ .+..|.
T Consensus 103 ~~~~~~~~~~~l~~l~~~g--~~~~~i~t~~-~~~~~~~~l~~~~~~~~f~~~~~-------------------~~kpk~ 160 (234)
T 3ddh_A 103 PIELLPGVKETLKTLKETG--KYKLVVATKG-DLLDQENKLERSGLSPYFDHIEV-------------------MSDKTE 160 (234)
T ss_dssp CCCBCTTHHHHHHHHHHHC--CCEEEEEEES-CHHHHHHHHHHHTCGGGCSEEEE-------------------ESCCSH
T ss_pred cCCcCccHHHHHHHHHhCC--CeEEEEEeCC-chHHHHHHHHHhCcHhhhheeee-------------------cCCCCH
Confidence 5689999999999998742 1689999977 46677777766 5421 11221 122488
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEEc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi~ 502 (563)
..++.+++..+.+ +.++++||||. ||+.|+..||++++.-
T Consensus 161 ~~~~~~~~~lgi~-~~~~i~iGD~~~~Di~~a~~aG~~~v~v 201 (234)
T 3ddh_A 161 KEYLRLLSILQIA-PSELLMVGNSFKSDIQPVLSLGGYGVHI 201 (234)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHHTCEEEEC
T ss_pred HHHHHHHHHhCCC-cceEEEECCCcHHHhHHHHHCCCeEEEe
Confidence 8999999988874 58899999996 9999999999977664
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.69 E-value=7.7e-08 Score=90.88 Aligned_cols=97 Identities=18% Similarity=0.280 Sum_probs=71.1
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.+++ . +++.|+|.+ +...++..++. ++.. ..+++.+ ..+..|
T Consensus 80 ~~~~~~~~~~~~l~~l~~---~-~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~----------------~~~~~K 138 (209)
T 2hdo_A 80 DQIELYPGITSLFEQLPS---E-LRLGIVTSQ-RRNELESGMRSYPFMMRMAVTISAD----------------DTPKRK 138 (209)
T ss_dssp GGCEECTTHHHHHHHSCT---T-SEEEEECSS-CHHHHHHHHTTSGGGGGEEEEECGG----------------GSSCCT
T ss_pred ccCCcCCCHHHHHHHHHh---c-CcEEEEeCC-CHHHHHHHHHHcChHhhccEEEecC----------------cCCCCC
Confidence 457889999999998874 2 789999988 57778888776 4421 1122111 113346
Q ss_pred --HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 461 --VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 461 --~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
...++.+++..+.+ +.++++||||.+|+.|+..||+++++.
T Consensus 139 P~~~~~~~~~~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~ 181 (209)
T 2hdo_A 139 PDPLPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLA 181 (209)
T ss_dssp TSSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred CCcHHHHHHHHHcCCC-cccEEEECCChhhHHHHHHcCCeEEEE
Confidence 67788888877763 578999999999999999999987764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.68 E-value=3.3e-07 Score=87.59 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=70.3
Q ss_pred ccCCCCchHHHHHHHHHHc-CCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 384 ERLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~-g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
....+.||+.++++.++++ | +++.|+|++ ....++..++. ++... + + ...+|.-.. ..+..+.
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~g---~~~~i~t~~-~~~~~~~~l~~~~l~~~--f------~-~~~~~~~~~--~~~k~~~ 154 (234)
T 2hcf_A 90 EDITLLEGVRELLDALSSRSD---VLLGLLTGN-FEASGRHKLKLPGIDHY--F------P-FGAFADDAL--DRNELPH 154 (234)
T ss_dssp GGEEECTTHHHHHHHHHTCTT---EEEEEECSS-CHHHHHHHHHTTTCSTT--C------S-CEECTTTCS--SGGGHHH
T ss_pred CCCCcCCCHHHHHHHHHhCCC---ceEEEEcCC-cHHHHHHHHHHCCchhh--c------C-cceecCCCc--CccchHH
Confidence 3567889999999999998 8 999999998 47778887776 54321 0 0 011111000 0011134
Q ss_pred HHHHHHHHHhC--CCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 462 QAFNNTLEKYG--TDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~--~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
..++.+++..+ . .+.++++||||.+|+.|+..||++ +.+.
T Consensus 155 ~~~~~~~~~lg~~~-~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 197 (234)
T 2hcf_A 155 IALERARRMTGANY-SPSQIVIIGDTEHDIRCARELDARSIAVA 197 (234)
T ss_dssp HHHHHHHHHHCCCC-CGGGEEEEESSHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHhCCCC-CcccEEEECCCHHHHHHHHHCCCcEEEEc
Confidence 56677777777 4 357899999999999999999986 4444
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.9e-07 Score=88.68 Aligned_cols=97 Identities=12% Similarity=0.052 Sum_probs=70.3
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|.+ +...+...++. ++.. ..+++.+ .+..+--+.
T Consensus 82 ~~~~~pg~~~~l~~L~~~g---~~~~i~tn~-~~~~~~~~l~~~~l~~~fd~~~~~~--------------~~~~~KP~p 143 (216)
T 3kbb_A 82 LLKENPGVREALEFVKSKR---IKLALATST-PQREALERLRRLDLEKYFDVMVFGD--------------QVKNGKPDP 143 (216)
T ss_dssp HCCBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECGG--------------GSSSCTTST
T ss_pred hcccCccHHHHHHHHHHcC---CCcccccCC-cHHHHHHHHHhcCCCcccccccccc--------------ccCCCcccH
Confidence 4678999999999999999 999999988 57777777776 5532 1222211 011111234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
..+...++..+.. +.++++||||.+|+.+.+.||+..+
T Consensus 144 ~~~~~a~~~lg~~-p~e~l~VgDs~~Di~aA~~aG~~~i 181 (216)
T 3kbb_A 144 EIYLLVLERLNVV-PEKVVVFEDSKSGVEAAKSAGIERI 181 (216)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHhhCCC-ccceEEEecCHHHHHHHHHcCCcEE
Confidence 6677777777763 5889999999999999999998544
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=93.34 Aligned_cols=104 Identities=12% Similarity=0.053 Sum_probs=72.2
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
....+.||+.++++.++++| +++.|+|.+ ....++..++. ++... +.+...++.. +..+..|..
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~l~~~~~~~~--------~~~~~~~~~~---~~~~kp~~~ 164 (267)
T 1swv_A 100 RYASPINGVKEVIASLRERG---IKIGSTTGY-TREMMDIVAKEAALQGY--------KPDFLVTPDD---VPAGRPYPW 164 (267)
T ss_dssp GGCCBCTTHHHHHHHHHHTT---CEEEEBCSS-CHHHHHHHHHHHHHTTC--------CCSCCBCGGG---SSCCTTSSH
T ss_pred cccccCccHHHHHHHHHHcC---CeEEEEcCC-CHHHHHHHHHHcCCccc--------ChHheecCCc---cCCCCCCHH
Confidence 35678899999999999988 999999987 46677776654 32110 0011122221 122345778
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
.+..+++..+.+...++++||||.||+.|+..||++ +.+.
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~ 205 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI 205 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 888888888764227899999999999999999974 3443
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.66 E-value=2.1e-07 Score=88.61 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=70.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.+++ | +++.|+|.+ +...++..|+. |+.. ..|++.+ ..+..|.
T Consensus 82 ~~~~~~g~~~~l~~L~~-~---~~l~i~T~~-~~~~~~~~l~~~gl~~~f~~i~~~~----------------~~~Kp~p 140 (210)
T 2ah5_A 82 EAQLFPQIIDLLEELSS-S---YPLYITTTK-DTSTAQDMAKNLEIHHFFDGIYGSS----------------PEAPHKA 140 (210)
T ss_dssp SCEECTTHHHHHHHHHT-T---SCEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEEC----------------SSCCSHH
T ss_pred CCCCCCCHHHHHHHHHc-C---CeEEEEeCC-CHHHHHHHHHhcCchhheeeeecCC----------------CCCCCCh
Confidence 46788999999999998 8 999999988 46677777776 5532 1222221 1233477
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+...++..+.+ +.++++||||.+|+.++..||+.
T Consensus 141 ~~~~~~~~~lg~~-p~~~~~vgDs~~Di~~a~~aG~~ 176 (210)
T 2ah5_A 141 DVIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQ 176 (210)
T ss_dssp HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCE
T ss_pred HHHHHHHHHcCCC-cccEEEECCCHHHHHHHHHCCCc
Confidence 8888888888764 57899999999999999999984
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.65 E-value=6.8e-07 Score=85.33 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=66.9
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH-
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV- 461 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~- 461 (563)
..+.+.||+.++++.+++ | ++++|+|.+ ....+...+.. +.....|++.. .+. ....++.
T Consensus 96 ~~~~~~~~~~~~l~~l~~-~---~~~~i~tn~-~~~~~~~~l~~l~~~fd~i~~~~----------~~~---~~KP~~~~ 157 (240)
T 3smv_A 96 KNWPAFPDTVEALQYLKK-H---YKLVILSNI-DRNEFKLSNAKLGVEFDHIITAQ----------DVG---SYKPNPNN 157 (240)
T ss_dssp GGCCBCTTHHHHHHHHHH-H---SEEEEEESS-CHHHHHHHHTTTCSCCSEEEEHH----------HHT---SCTTSHHH
T ss_pred hcCCCCCcHHHHHHHHHh-C---CeEEEEeCC-ChhHHHHHHHhcCCccCEEEEcc----------ccC---CCCCCHHH
Confidence 467899999999999998 6 899999988 56677777664 21112222221 000 0011122
Q ss_pred --HHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEEcC
Q 008499 462 --QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGS 503 (563)
Q Consensus 462 --~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi~~ 503 (563)
.+++. ++..+.+ +.++++||||. +|+.|++.||+++++..
T Consensus 158 ~~~~l~~-~~~lgi~-~~~~~~vGD~~~~Di~~a~~aG~~~~~~~ 200 (240)
T 3smv_A 158 FTYMIDA-LAKAGIE-KKDILHTAESLYHDHIPANDAGLVSAWIY 200 (240)
T ss_dssp HHHHHHH-HHHTTCC-GGGEEEEESCTTTTHHHHHHHTCEEEEEC
T ss_pred HHHHHHH-HHhcCCC-chhEEEECCCchhhhHHHHHcCCeEEEEc
Confidence 23333 5666653 58899999996 99999999999877753
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.7e-07 Score=88.60 Aligned_cols=101 Identities=12% Similarity=0.107 Sum_probs=70.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
...+.||+.++++.++++| +++.|+|.+ ..++..++. ++... | +...++.. ...+..|...
T Consensus 89 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~---~~~~~~l~~~~l~~~--------f-~~~~~~~~---~~~~Kp~~~~ 150 (221)
T 2wf7_A 89 PADVYPGILQLLKDLRSNK---IKIALASAS---KNGPFLLERMNLTGY--------F-DAIADPAE---VAASKPAPDI 150 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTT---CEEEECCCC---TTHHHHHHHTTCGGG--------C-SEECCTTT---SSSCTTSSHH
T ss_pred CCCCCCCHHHHHHHHHHCC---CeEEEEcCc---HHHHHHHHHcChHHH--------c-ceEecccc---CCCCCCChHH
Confidence 3578899999999999988 999999975 345556554 44210 1 11111111 1112224457
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
++.+++..+.+ +.++++||||.||+.|++.||+++++.+.
T Consensus 151 ~~~~~~~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~~ 190 (221)
T 2wf7_A 151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEECC
Confidence 88888887764 57899999999999999999998887644
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.63 E-value=3.1e-06 Score=80.79 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=70.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++ +++.|+|.+ ....++..++. ++.. ..+++. . ....+..|.
T Consensus 101 ~~~~~~~~~~~l~~l~~~----~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~-----------~---~~~~~kp~~ 161 (238)
T 3ed5_A 101 GHQLIDGAFDLISNLQQQ----FDLYIVTNG-VSHTQYKRLRDSGLFPFFKDIFVS-----------E---DTGFQKPMK 161 (238)
T ss_dssp CCCBCTTHHHHHHHHHTT----SEEEEEECS-CHHHHHHHHHHTTCGGGCSEEEEG-----------G---GTTSCTTCH
T ss_pred cCCCCccHHHHHHHHHhc----CeEEEEeCC-CHHHHHHHHHHcChHhhhheEEEe-----------c---ccCCCCCCh
Confidence 578999999999999853 789999988 47777777766 5532 112211 1 111233467
Q ss_pred HHHHHHHHHhC-CCCCccEEEEcCCc-CchHHhhhcCccEEE
Q 008499 462 QAFNNTLEKYG-TDRKNLSVYIGDSV-GDLLCLLEADIGIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~-~~~~~~viyiGDs~-~Dl~~l~~Ad~givi 501 (563)
..++.+++..+ .+ +..+++||||. +|+.|+..||++.+.
T Consensus 162 ~~~~~~~~~~g~~~-~~~~i~vGD~~~~Di~~a~~aG~~~i~ 202 (238)
T 3ed5_A 162 EYFNYVFERIPQFS-AEHTLIIGDSLTADIKGGQLAGLDTCW 202 (238)
T ss_dssp HHHHHHHHTSTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCC-hhHeEEECCCcHHHHHHHHHCCCEEEE
Confidence 88898888887 53 58899999998 999999999995443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-06 Score=83.38 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=65.3
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
..+.+.||+.++++.++++ +++.|+|.+. .. +.. ++.. ..+++.+ ....+.-|
T Consensus 102 ~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~-----l~~~~l~~~f~~~~~~~--------------~~~~~kp~ 157 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKT----FTLGVITNGN-AD-----VRRLGLADYFAFALCAE--------------DLGIGKPD 157 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTT----SEEEEEESSC-CC-----GGGSTTGGGCSEEEEHH--------------HHTCCTTS
T ss_pred ccCccCcCHHHHHHHHHhC----CeEEEEECCc-hh-----hhhcCcHHHeeeeEEcc--------------ccCCCCcC
Confidence 3578999999999999864 6899999873 32 333 4321 1222111 01122346
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi~ 502 (563)
...++.+++..+.+ +.++++|||+. +|+.|+..||++++.-
T Consensus 158 ~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v 199 (230)
T 3vay_A 158 PAPFLEALRRAKVD-ASAAVHVGDHPSDDIAGAQQAGMRAIWY 199 (230)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCC-chheEEEeCChHHHHHHHHHCCCEEEEE
Confidence 78888888888764 58899999997 9999999999976553
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.5e-07 Score=91.77 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=70.6
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++ +| +++.|+|.+ ....++..+.. ++.. ..|++ .+..+
T Consensus 109 ~~~~~~~~~~~~l~~l~-~~---~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~i~~-------------------~~kp~ 164 (251)
T 2pke_A 109 HPVEVIAGVREAVAAIA-AD---YAVVLITKG-DLFHQEQKIEQSGLSDLFPRIEV-------------------VSEKD 164 (251)
T ss_dssp CCCCBCTTHHHHHHHHH-TT---SEEEEEEES-CHHHHHHHHHHHSGGGTCCCEEE-------------------ESCCS
T ss_pred ccCCcCccHHHHHHHHH-CC---CEEEEEeCC-CHHHHHHHHHHcCcHHhCceeee-------------------eCCCC
Confidence 35788999999999999 88 999999988 46677777765 5421 11221 11124
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi~ 502 (563)
...+..+++..+.+ +.++++||||. ||+.|++.||++++.-
T Consensus 165 ~~~~~~~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v 206 (251)
T 2pke_A 165 PQTYARVLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIYT 206 (251)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEEE
Confidence 67778888877763 57899999999 9999999999976654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.60 E-value=3.4e-08 Score=98.42 Aligned_cols=100 Identities=13% Similarity=0.048 Sum_probs=72.6
Q ss_pred ccCCCCchHHHHHHHHHHc-CCCCCcEEEEccccChHhhHHHHhC-CCCcc-eEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSS-GLNAL-NVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~-g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
+...+.||+.++++.++++ | +++.|+|.+ ....++..++. ++... .+++ +.- ...+..|
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g---~~l~i~T~~-~~~~~~~~l~~~~l~~f~~i~~-----------~~~---~~~~kp~ 172 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPK---EKWAVATSG-TRDMAKKWFDILKIKRPEYFIT-----------AND---VKQGKPH 172 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCG---GGEEEECSS-CHHHHHHHHHHHTCCCCSSEEC-----------GGG---CSSCTTS
T ss_pred cCCCcCcCHHHHHHHHHhccC---CeEEEEeCC-CHHHHHHHHHHcCCCccCEEEE-----------ccc---CCCCCCC
Confidence 4567889999999999988 7 999999988 47778877766 54311 1111 110 1122346
Q ss_pred HHHHHHHHHHhCCC------CCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 461 VQAFNNTLEKYGTD------RKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 461 ~~~l~~~~~~~~~~------~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
...+..+++..+.. .+.++++||||.||+.|++.||++++.
T Consensus 173 ~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~ 219 (275)
T 2qlt_A 173 PEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVG 219 (275)
T ss_dssp SHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEE
Confidence 67778888777751 257899999999999999999997665
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.58 E-value=4.6e-07 Score=85.12 Aligned_cols=100 Identities=13% Similarity=0.150 Sum_probs=70.6
Q ss_pred HHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCC
Q 008499 379 IKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVE 455 (563)
Q Consensus 379 i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~ 455 (563)
+.+......+.||+.+ ++.++++ ++++|+|.+ +...++..++. ++.. ..+++.+ - ..
T Consensus 66 ~~~~~~~~~~~~~~~~-l~~l~~~----~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~-----------~---~~ 125 (201)
T 2w43_A 66 ELNKWKNLKAYEDTKY-LKEISEI----AEVYALSNG-SINEVKQHLERNGLLRYFKGIFSAE-----------S---VK 125 (201)
T ss_dssp HHHHHHTCEECGGGGG-HHHHHHH----SEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGG-----------G---GT
T ss_pred HHHhhcccccCCChHH-HHHHHhC----CeEEEEeCc-CHHHHHHHHHHCCcHHhCcEEEehh-----------h---cC
Confidence 3333446789999999 9999864 689999988 57788888776 5531 1222221 0 11
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.+..|...+..+++..+ +.++++||||.+|+.|+..||++++.
T Consensus 126 ~~Kp~~~~~~~~~~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 126 EYKPSPKVYKYFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp CCTTCHHHHHHHHHHHT---CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHhcC---CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 12234777788887776 46899999999999999999997555
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.57 E-value=6.6e-07 Score=85.18 Aligned_cols=99 Identities=14% Similarity=0.201 Sum_probs=70.1
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCC--
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESP-- 457 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g-- 457 (563)
..+.+.||+.++++.++ .++.|+|.+ ....++..+.. ++.. ..+++.+ .. ..+
T Consensus 84 ~~~~~~~~~~~~l~~l~------~~~~i~s~~-~~~~~~~~l~~~~l~~~~~~~~~~~~-----------~~---~~~~~ 142 (229)
T 2fdr_A 84 RDVKIIDGVKFALSRLT------TPRCICSNS-SSHRLDMMLTKVGLKPYFAPHIYSAK-----------DL---GADRV 142 (229)
T ss_dssp HHCCBCTTHHHHHHHCC------SCEEEEESS-CHHHHHHHHHHTTCGGGTTTCEEEHH-----------HH---CTTCC
T ss_pred cCCccCcCHHHHHHHhC------CCEEEEECC-ChhHHHHHHHhCChHHhccceEEecc-----------cc---ccCCC
Confidence 35678899999988764 378999988 57777777765 5421 1122211 11 122
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEcCC
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS 504 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~~~ 504 (563)
..|...++.+++..+.+ ..++++||||.||+.|++.||++ +.++..
T Consensus 143 kpk~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~ 189 (229)
T 2fdr_A 143 KPKPDIFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGA 189 (229)
T ss_dssp TTSSHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred CcCHHHHHHHHHHcCCC-hhHeEEEcCCHHHHHHHHHCCCEEEEEecC
Confidence 34778888888888764 57899999999999999999996 556543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=98.49 E-value=1.4e-05 Score=78.95 Aligned_cols=99 Identities=15% Similarity=0.199 Sum_probs=70.4
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
..+.+.||+.++++.+++ + +++.|+|.+ +...++..|.. |+.. ..|++.. ....+--+
T Consensus 118 ~~~~~~~g~~~~L~~L~~-~---~~l~i~Tn~-~~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~KP~ 178 (260)
T 2gfh_A 118 QHMILADDVKAMLTELRK-E---VRLLLLTNG-DRQTQREKIEACACQSYFDAIVIGG--------------EQKEEKPA 178 (260)
T ss_dssp HTCCCCHHHHHHHHHHHT-T---SEEEEEECS-CHHHHHHHHHHHTCGGGCSEEEEGG--------------GSSSCTTC
T ss_pred hcCCCCcCHHHHHHHHHc-C---CcEEEEECc-ChHHHHHHHHhcCHHhhhheEEecC--------------CCCCCCCC
Confidence 357899999999999986 5 899999998 57778887776 6532 1222211 01112224
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCc--cEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI--GIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~--givi~ 502 (563)
...+...++..+.+ +.++++|||| .+|+.+...||+ .|.+.
T Consensus 179 p~~~~~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~ 222 (260)
T 2gfh_A 179 PSIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWIN 222 (260)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEc
Confidence 56777788777763 5789999996 999999999998 34453
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=1.6e-08 Score=100.74 Aligned_cols=92 Identities=22% Similarity=0.293 Sum_probs=68.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
...++||+.++++.|+++| ++++|+|++ +...++.+++. |+. +++++- .+..|...
T Consensus 134 ~~~~~~g~~~~l~~L~~~g---~~~~i~T~~-~~~~~~~~~~~~gl~--~~f~~~-----------------~p~~k~~~ 190 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEG---LKIIILSGD-KEDKVKELSKELNIQ--EYYSNL-----------------SPEDKVRI 190 (263)
Confidence 4579999999999999988 999999998 46666666554 432 111111 13457777
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
++++... +.++++||||.||++++..||+|+.++..
T Consensus 191 ~~~l~~~-----~~~~~~VGD~~~D~~aa~~Agv~va~g~~ 226 (263)
T 2yj3_A 191 IEKLKQN-----GNKVLMIGDGVNDAAALALADVSVAMGNG 226 (263)
Confidence 7766542 45799999999999999999999988743
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-06 Score=86.50 Aligned_cols=74 Identities=23% Similarity=0.416 Sum_probs=56.1
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecC---chhHHhHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQK 530 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~ 530 (563)
..+.+|...++.+++..+.+ ...+++||||.||++|++.|++||+++ +.+.+++.| .++--+ .|+...++
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A-----~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 193 PQGIDKALSLSVLLENIGMT-REEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAA-----DYITLTNDEDGVAEAIE 266 (279)
T ss_dssp CTTCCHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC-----SEECCCGGGTHHHHHHH
T ss_pred cCCCChHHHHHHHHHHcCCC-HHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhC-----CEEcCCCCCcHHHHHHH
Confidence 34678999999999988874 578999999999999999999999998 446666554 344322 36666666
Q ss_pred hhhc
Q 008499 531 EYTE 534 (563)
Q Consensus 531 ~~~~ 534 (563)
.+..
T Consensus 267 ~~~~ 270 (279)
T 4dw8_A 267 RIFN 270 (279)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 6543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.4e-06 Score=81.09 Aligned_cols=89 Identities=19% Similarity=0.212 Sum_probs=70.6
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
+++.++++| +++.|+|++ ....++.+++. |+. ++++ ...|...++.+++..+.
T Consensus 47 ~l~~L~~~g---~~~~i~T~~-~~~~~~~~~~~lgi~---~~~~-------------------~~~k~~~l~~~~~~~~~ 100 (176)
T 3mmz_A 47 GIAALRKSG---LTMLILSTE-QNPVVAARARKLKIP---VLHG-------------------IDRKDLALKQWCEEQGI 100 (176)
T ss_dssp HHHHHHHTT---CEEEEEESS-CCHHHHHHHHHHTCC---EEES-------------------CSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CeEEEEECc-ChHHHHHHHHHcCCe---eEeC-------------------CCChHHHHHHHHHHcCC
Confidence 889999999 999999998 47788888776 664 3322 14689999999988876
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHH
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 510 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~ 510 (563)
+ +.+++|||||.||++|+..|++++++++ .+.+++.
T Consensus 101 ~-~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ 137 (176)
T 3mmz_A 101 A-PERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGA 137 (176)
T ss_dssp C-GGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHH
T ss_pred C-HHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHh
Confidence 3 5789999999999999999999999964 3444433
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-06 Score=84.28 Aligned_cols=94 Identities=12% Similarity=0.005 Sum_probs=62.9
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
....+.||+.++++.++++| ++.|+|.+ +...++..|+. |+.. . |+. .. ..+..|..
T Consensus 93 ~~~~~~~g~~~~l~~l~~~g----~~~i~Tn~-~~~~~~~~l~~~gl~~--~------f~~-~~--------~~~~~K~~ 150 (231)
T 2p11_A 93 FASRVYPGALNALRHLGARG----PTVILSDG-DVVFQPRKIARSGLWD--E------VEG-RV--------LIYIHKEL 150 (231)
T ss_dssp GGGGBCTTHHHHHHHHHTTS----CEEEEEEC-CSSHHHHHHHHTTHHH--H------TTT-CE--------EEESSGGG
T ss_pred HhCCcCccHHHHHHHHHhCC----CEEEEeCC-CHHHHHHHHHHcCcHH--h------cCe-eE--------EecCChHH
Confidence 45789999999999999765 79999998 47778888776 4421 0 110 00 01224544
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcC---chHHhhhcCcc-EEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVG---DLLCLLEADIG-IVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~---Dl~~l~~Ad~g-ivi~ 502 (563)
.++.+... . .+.++++||||.+ |+.+...||+. |.+.
T Consensus 151 ~~~~~~~~--~-~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~ 191 (231)
T 2p11_A 151 MLDQVMEC--Y-PARHYVMVDDKLRILAAMKKAWGARLTTVFPR 191 (231)
T ss_dssp CHHHHHHH--S-CCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC
T ss_pred HHHHHHhc--C-CCceEEEEcCccchhhhhHHHHHcCCeEEEeC
Confidence 55555542 2 3578999999999 77888888874 4443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-06 Score=82.28 Aligned_cols=92 Identities=16% Similarity=0.170 Sum_probs=61.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| ++++|+|.+ +. .++..|+. |+.. ..|++.+ - .+..|.
T Consensus 93 ~~~~~~~~~~~l~~l~~~g---~~~~i~Tn~-~~-~~~~~l~~~gl~~~f~~~~~~~-----------~-----~~~~Kp 151 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNG---YKLALVSNA-SP-RVKTLLEKFDLKKYFDALALSY-----------E-----IKAVKP 151 (220)
T ss_dssp EEEECTTHHHHHHHHHTTT---CEEEECCSC-HH-HHHHHHHHHTCGGGCSEEC--------------------------
T ss_pred CceECcCHHHHHHHHHHCC---CEEEEEeCC-cH-HHHHHHHhcCcHhHeeEEEecc-----------c-----cCCCCC
Confidence 4678999999999999988 999999987 34 46777766 6532 1222211 0 011222
Q ss_pred --HHHHHHHHHhCCCCCccEEEEcCCcC-chHHhhhcCccEEE
Q 008499 462 --QAFNNTLEKYGTDRKNLSVYIGDSVG-DLLCLLEADIGIVI 501 (563)
Q Consensus 462 --~~l~~~~~~~~~~~~~~viyiGDs~~-Dl~~l~~Ad~givi 501 (563)
..+...++..+.. . ++||||.+ |+.+...||+..+.
T Consensus 152 ~~~~~~~~~~~~~~~---~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 152 NPKIFGFALAKVGYP---A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp -CCHHHHHHHHHCSS---E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred CHHHHHHHHHHcCCC---e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 3566666666642 2 99999999 99999999985444
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1e-05 Score=80.18 Aligned_cols=97 Identities=13% Similarity=0.144 Sum_probs=69.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC----CCCcceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS----GLNALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~----~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
.+.+.||+.++++.++++| +++.|+|.+ +....+..|+. ++... | +.++++ ..+ .|
T Consensus 128 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~-~~~~~~~~l~~~~~~~l~~~--------f-d~i~~~------~~~-~K 187 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAG---MKVYIYSSG-SVEAQKLLFGHSTEGDILEL--------V-DGHFDT------KIG-HK 187 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHTBTTBCCGGG--------C-SEEECG------GGC-CT
T ss_pred ccccCcCHHHHHHHHHhCC---CeEEEEeCC-CHHHHHHHHHhhcccChHhh--------c-cEEEec------CCC-CC
Confidence 5789999999999999998 999999988 56677777764 23210 1 111111 112 34
Q ss_pred --HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 461 --VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 461 --~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
...+...++..+.. +.++++||||.+|+.+...||+ .|.+.
T Consensus 188 P~p~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~ 231 (261)
T 1yns_A 188 VESESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVV 231 (261)
T ss_dssp TCHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEe
Confidence 36777777777763 5789999999999999999998 45553
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.31 E-value=9.6e-06 Score=79.33 Aligned_cols=100 Identities=10% Similarity=0.109 Sum_probs=66.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.+.|.+ . .....|+. |+.. ..|++.+ . .| .+--+.
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g---~~i~i~~~~--~-~~~~~L~~~gl~~~Fd~i~~~~-----~--~~-------~~KP~p 173 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNN---IKIGLSSAS--K-NAINVLNHLGISDKFDFIADAG-----K--CK-------NNKPHP 173 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTT---CEEEECCSC--T-THHHHHHHHTCGGGCSEECCGG-----G--CC-------SCTTSS
T ss_pred ccccchhHHHHHHHHHhcc---ccccccccc--c-hhhhHhhhcccccccceeeccc-----c--cC-------CCCCcH
Confidence 4568999999999999998 888776653 3 34556665 6532 1222211 0 01 111123
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCCh
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSS 505 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~ 505 (563)
..+...+++.+. .+.++++||||.+|+.+...||+ .|.+++..
T Consensus 174 ~~~~~a~~~lg~-~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 217 (250)
T 4gib_A 174 EIFLMSAKGLNV-NPQNCIGIEDASAGIDAINSANMFSVGVGNYE 217 (250)
T ss_dssp HHHHHHHHHHTC-CGGGEEEEESSHHHHHHHHHTTCEEEEESCTT
T ss_pred HHHHHHHHHhCC-ChHHeEEECCCHHHHHHHHHcCCEEEEECChh
Confidence 566667777776 35889999999999999999998 56665443
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=5.1e-06 Score=89.20 Aligned_cols=105 Identities=12% Similarity=0.052 Sum_probs=68.9
Q ss_pred HHhccCCCCchHHHHHHHHHHcCCCCCcEEEEcccc-----ChHhhHHHHhCCC--CcceEEeeccEecCccccCccccc
Q 008499 381 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCW-----CGDLIRASFSSGL--NALNVHANEFSFKESISTGEIIEK 453 (563)
Q Consensus 381 ~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gw-----s~~~I~~~L~~~l--~~~~I~aN~l~~~~g~~tG~~~~~ 453 (563)
+......+.||+.++++.|+++| +++.|+|.++ ....+...+. ++ -...|++.+ -
T Consensus 94 ~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Tn~~~~~~~~~~~~~~~~~-~l~~~fd~i~~~~-----------~--- 155 (555)
T 3i28_A 94 KAISARKINRPMLQAALMLRKKG---FTTAILTNTWLDDRAERDGLAQLMC-ELKMHFDFLIESC-----------Q--- 155 (555)
T ss_dssp HHHHHCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSTTHHHHHHHHH-HHHTTSSEEEEHH-----------H---
T ss_pred HhHhhcCcChhHHHHHHHHHHCC---CEEEEEeCCCccccchhhHHHHHhh-hhhhheeEEEecc-----------c---
Confidence 34456889999999999999999 9999999861 1222222221 11 012233221 0
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 454 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 454 ~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+..+--+...+...++..+.+ +.++++||||.+|+.++..||+..+....
T Consensus 156 ~~~~KP~p~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 156 VGMVKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQD 205 (555)
T ss_dssp HTCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred cCCCCCCHHHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence 001112346777788877764 57899999999999999999995554433
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-06 Score=83.65 Aligned_cols=91 Identities=14% Similarity=0.262 Sum_probs=70.4
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
-++.++++| +++.|+|++ +...++.+++. |+. .++.+ ...|...++.+++..+.
T Consensus 60 ~l~~L~~~G---~~~~ivT~~-~~~~~~~~l~~lgi~--~~~~~-------------------~k~k~~~~~~~~~~~~~ 114 (195)
T 3n07_A 60 GVKALMNAG---IEIAIITGR-RSQIVENRMKALGIS--LIYQG-------------------QDDKVQAYYDICQKLAI 114 (195)
T ss_dssp HHHHHHHTT---CEEEEECSS-CCHHHHHHHHHTTCC--EEECS-------------------CSSHHHHHHHHHHHHCC
T ss_pred HHHHHHHCC---CEEEEEECc-CHHHHHHHHHHcCCc--EEeeC-------------------CCCcHHHHHHHHHHhCC
Confidence 488899999 999999998 57788888776 553 22211 14688999999988876
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcCC-hhHHHHH
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG 511 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~-~~L~~~~ 511 (563)
+ +.++++||||.||++|+..|++++++++. +.+++.+
T Consensus 115 ~-~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~a 152 (195)
T 3n07_A 115 A-PEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRA 152 (195)
T ss_dssp C-GGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHC
T ss_pred C-HHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhC
Confidence 4 57899999999999999999999999743 4444433
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.27 E-value=5.5e-06 Score=80.38 Aligned_cols=117 Identities=17% Similarity=0.104 Sum_probs=78.9
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEe-c-Cc-cc-c---------------
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSF-K-ES-IS-T--------------- 447 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~-~-~g-~~-t--------------- 447 (563)
+.|...+.++.++++| +.++|+|+. +...+..+++. ++...-|.+|-..+ + +| .. .
T Consensus 23 i~~~~~~~l~~l~~~g---~~~~i~TGr-~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~ 98 (227)
T 1l6r_A 23 ISTKAIESIRSAEKKG---LTVSLLSGN-VIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK 98 (227)
T ss_dssp BCHHHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHCC---CEEEEECCC-CcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHH
Confidence 4456778899999988 999999987 56666766665 55432333443322 1 11 11 0
Q ss_pred ------------------------------------------Cc-ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcC
Q 008499 448 ------------------------------------------GE-IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD 484 (563)
Q Consensus 448 ------------------------------------------G~-~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGD 484 (563)
|. +..-...+.+|...++.+++..+.+ ...+++|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~-~~~~~~iGD 177 (227)
T 1l6r_A 99 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE-YDEILVIGD 177 (227)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC-GGGEEEECC
T ss_pred HhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcC-HHHEEEECC
Confidence 00 0000134578999999999887763 468999999
Q ss_pred CcCchHHhhhcCccEEEcC-ChhHHH
Q 008499 485 SVGDLLCLLEADIGIVIGS-SSSLRR 509 (563)
Q Consensus 485 s~~Dl~~l~~Ad~givi~~-~~~L~~ 509 (563)
|.||++|+..|++||+++. .+.+++
T Consensus 178 ~~nD~~m~~~ag~~va~~n~~~~~k~ 203 (227)
T 1l6r_A 178 SNNDMPMFQLPVRKACPANATDNIKA 203 (227)
T ss_dssp SGGGHHHHTSSSEEEECTTSCHHHHH
T ss_pred cHHhHHHHHHcCceEEecCchHHHHH
Confidence 9999999999999999973 344543
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.23 E-value=7.3e-06 Score=79.40 Aligned_cols=48 Identities=17% Similarity=0.193 Sum_probs=41.2
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+..|...++.+++..+.+ ..++++||||.||++|+..|+++++++..
T Consensus 150 ~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~~~~ 197 (231)
T 1wr8_A 150 PWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKVAVAQA 197 (231)
T ss_dssp TTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred CCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEecCC
Confidence 3567999999999888763 47899999999999999999999888643
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.19 E-value=4.9e-06 Score=78.34 Aligned_cols=84 Identities=14% Similarity=0.289 Sum_probs=67.7
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
+++.++++| +++.|+|++ ....++.+++. |+. +++.+ ...|...++.+++..+.
T Consensus 54 ~l~~L~~~g---~~~~i~T~~-~~~~~~~~~~~lgl~--~~f~~-------------------~~~K~~~~~~~~~~~g~ 108 (189)
T 3mn1_A 54 GIKMLIASG---VTTAIISGR-KTAIVERRAKSLGIE--HLFQG-------------------REDKLVVLDKLLAELQL 108 (189)
T ss_dssp HHHHHHHTT---CEEEEECSS-CCHHHHHHHHHHTCS--EEECS-------------------CSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CEEEEEECc-ChHHHHHHHHHcCCH--HHhcC-------------------cCChHHHHHHHHHHcCC
Confidence 888999999 999999998 47788888776 653 22211 15688999999988876
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+ +.++++||||.+|++|+..|+++++++..
T Consensus 109 ~-~~~~~~vGD~~nDi~~~~~ag~~~~~~~~ 138 (189)
T 3mn1_A 109 G-YEQVAYLGDDLPDLPVIRRVGLGMAVANA 138 (189)
T ss_dssp C-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred C-hhHEEEECCCHHHHHHHHHCCCeEEeCCc
Confidence 3 57899999999999999999999999743
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=5.9e-06 Score=76.95 Aligned_cols=86 Identities=17% Similarity=0.273 Sum_probs=67.8
Q ss_pred HHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHh
Q 008499 393 TTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 471 (563)
Q Consensus 393 ~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~ 471 (563)
.++++.++++| ++++|+|++ +...++..++. ++.. ++ ++ +..|...++.+++..
T Consensus 41 ~~~l~~L~~~G---~~~~i~Tg~-~~~~~~~~~~~lgl~~--~~------~~-------------~k~k~~~~~~~~~~~ 95 (180)
T 1k1e_A 41 GLGIKMLMDAD---IQVAVLSGR-DSPILRRRIADLGIKL--FF------LG-------------KLEKETACFDLMKQA 95 (180)
T ss_dssp HHHHHHHHHTT---CEEEEEESC-CCHHHHHHHHHHTCCE--EE------ES-------------CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC---CeEEEEeCC-CcHHHHHHHHHcCCce--ee------cC-------------CCCcHHHHHHHHHHc
Confidence 47899999999 999999998 46777777766 6532 22 11 246888999998887
Q ss_pred CCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 472 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 472 ~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+.+ +..+++||||.+|++|+..|+++++++..
T Consensus 96 ~~~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~ 127 (180)
T 1k1e_A 96 GVT-AEQTAYIGDDSVDLPAFAACGTSFAVADA 127 (180)
T ss_dssp TCC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred CCC-HHHEEEECCCHHHHHHHHHcCCeEEeCCc
Confidence 763 47899999999999999999999998633
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.13 E-value=6.6e-06 Score=78.89 Aligned_cols=108 Identities=13% Similarity=0.100 Sum_probs=73.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcceEEeeccEecCccccC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALNVHANEFSFKESISTG 448 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG 448 (563)
...+.||+.++++.++++| ++++|+|.+ +. ..++..|+. |+....++...... +|...
T Consensus 54 ~~~~~~g~~e~L~~L~~~G---~~~~i~Tn~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-~g~~~- 127 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAG---IPVVVVTNQ-SGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHE-AGVGP- 127 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHT---CCEEEEEEC-HHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCT-TCCST-
T ss_pred cCeECcCHHHHHHHHHHCC---CEEEEEcCc-CCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCC-CCcee-
Confidence 4678899999999999999 999999998 34 567777776 65423333222111 12111
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
.....+..+--|...++.+++..+.+ +.++++|||+.+|+.++..+++..
T Consensus 128 ~~~~~~~~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 LAIPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TCCSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ecccCCccCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCE
Confidence 11112222333557788888877763 578999999999999999999854
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.12 E-value=3.6e-05 Score=74.95 Aligned_cols=96 Identities=10% Similarity=0.132 Sum_probs=65.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+.||+.++++.++++| +++.++|.+- .....|+. |+.. ..|++.+ .. | .+--...
T Consensus 94 ~~~~pg~~~ll~~L~~~g---~~i~i~t~~~---~~~~~l~~~gl~~~fd~i~~~~-----~~--~-------~~KP~p~ 153 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQ---ISVGLASVSL---NAPTILAALELREFFTFCADAS-----QL--K-------NSKPDPE 153 (243)
T ss_dssp GGBCTTHHHHHHHHHHTT---CEEEECCCCT---THHHHHHHTTCGGGCSEECCGG-----GC--S-------SCTTSTH
T ss_pred ccccccHHHHHHhhhccc---ccceeccccc---chhhhhhhhhhccccccccccc-----cc--c-------CCCCcHH
Confidence 468899999999999998 9999999752 34555655 5432 1111111 00 0 1111235
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
.+...++..+.. +.++++||||.+|+.+.+.||+ .|.+.
T Consensus 154 ~~~~a~~~lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 154 IFLAACAGLGVP-PQACIGIEDAQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp HHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 666677777763 5899999999999999999998 55564
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.12 E-value=9.8e-06 Score=73.68 Aligned_cols=88 Identities=15% Similarity=0.175 Sum_probs=67.6
Q ss_pred CchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHH
Q 008499 389 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNT 467 (563)
Q Consensus 389 rpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~ 467 (563)
.|+..++++.++++| ++++|+|++ +...++..++. ++. .++ +. +..|...++.+
T Consensus 38 ~~~~~~~l~~l~~~g---~~~~i~T~~-~~~~~~~~l~~~gl~--~~~------~~-------------~kp~~~~~~~~ 92 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMG---ITLAVISGR-DSAPLITRLKELGVE--EIY------TG-------------SYKKLEIYEKI 92 (162)
T ss_dssp EHHHHHHHHHHHTTT---CEEEEEESC-CCHHHHHHHHHTTCC--EEE------EC-------------C--CHHHHHHH
T ss_pred cccHHHHHHHHHHCC---CEEEEEeCC-CcHHHHHHHHHcCCH--hhc------cC-------------CCCCHHHHHHH
Confidence 345578999999988 999999998 46778888776 553 111 11 23577888888
Q ss_pred HHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 468 LEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 468 ~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++..+.+ +.++++||||.+|+.++..+|+++++.
T Consensus 93 ~~~~~~~-~~~~~~vGD~~~Di~~a~~ag~~~~~~ 126 (162)
T 2p9j_A 93 KEKYSLK-DEEIGFIGDDVVDIEVMKKVGFPVAVR 126 (162)
T ss_dssp HHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred HHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEec
Confidence 8877653 578999999999999999999988875
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.11 E-value=7.3e-06 Score=76.00 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=67.5
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
.++.|+++| +++.|+|+. ..++.+++. +++.. ++ .| +.+|...++.+++..+.
T Consensus 44 ~L~~Lk~~G---i~~~I~Tg~---~~~~~~l~~l~lgi~-~~-----------~g--------~~~K~~~l~~~~~~~gi 97 (168)
T 3ewi_A 44 GISLLKKSG---IEVRLISER---ACSKQTLSALKLDCK-TE-----------VS--------VSDKLATVDEWRKEMGL 97 (168)
T ss_dssp HHHHHHHTT---CEEEEECSS---CCCHHHHHTTCCCCC-EE-----------CS--------CSCHHHHHHHHHHHTTC
T ss_pred HHHHHHHCC---CEEEEEeCc---HHHHHHHHHhCCCcE-EE-----------EC--------CCChHHHHHHHHHHcCc
Confidence 578888889 999999986 577777774 33211 21 11 23699999999998876
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHH
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 511 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~ 511 (563)
+ +..++|||||.||++|+..|++++++++ .+.+++.|
T Consensus 98 ~-~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~A 135 (168)
T 3ewi_A 98 C-WKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAV 135 (168)
T ss_dssp C-GGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTC
T ss_pred C-hHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhC
Confidence 3 5789999999999999999999999963 34444433
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1e-05 Score=77.30 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=75.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccC--------------hHhhHHHHhC-CCCcceEEeeccEecCccccCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSS-GLNALNVHANEFSFKESISTGE 449 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws--------------~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~ 449 (563)
...+.||+.++++.|+++| ++++|+|.+-. ...++..|+. ++....++...-. .++ .+|.
T Consensus 48 ~~~~~pg~~e~L~~L~~~G---~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~-~~~-~~~~ 122 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMG---FALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHH-PQG-SVEE 122 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTT---CEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCB-TTC-SSGG
T ss_pred cCcCCcCHHHHHHHHHHCC---CeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcC-CCC-cccc
Confidence 4678899999999999999 99999999831 2677777776 6653343322211 111 1121
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc--EEEc
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG--IVIG 502 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g--ivi~ 502 (563)
....+..+--|...++.+++..+.+ ..++++|||+.+|+.++..|++. |.+.
T Consensus 123 ~~~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~ 176 (211)
T 2gmw_A 123 FRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVR 176 (211)
T ss_dssp GBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEES
T ss_pred cCccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEe
Confidence 1111222333456778888777763 57899999999999999999984 4443
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.09 E-value=9.9e-06 Score=75.71 Aligned_cols=96 Identities=9% Similarity=0.075 Sum_probs=72.0
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccC-hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC-GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws-~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
+...+.||+.++++.++++| ++++|+|++ + ...++..++. ++... +... ...+..|.
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G---~~v~ivT~~-~~~~~~~~~l~~~gl~~~--f~~~---------------~~~~~~k~ 123 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLG---VPGAAASRT-SEIEGANQLLELFDLFRY--FVHR---------------EIYPGSKI 123 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHT---CCEEEEECC-SCHHHHHHHHHHTTCTTT--EEEE---------------EESSSCHH
T ss_pred cccCcchhHHHHHHHHHHCC---ceEEEEeCC-CChHHHHHHHHHcCcHhh--ccee---------------EEEeCchH
Confidence 35689999999999999999 999999988 4 4778888776 55321 1000 00112577
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
..+..+++..+.+ +.++++|||+.+|+.++..+|+.++.
T Consensus 124 ~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~i~ 162 (187)
T 2wm8_A 124 THFERLQQKTGIP-FSQMIFFDDERRNIVDVSKLGVTCIH 162 (187)
T ss_dssp HHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHcCCC-hHHEEEEeCCccChHHHHHcCCEEEE
Confidence 7888888887763 57899999999999999999985443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.1e-05 Score=77.67 Aligned_cols=84 Identities=14% Similarity=0.312 Sum_probs=68.1
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
+++.|+++| +++.|+|++ ....++.+++. |+. .++.+ ...|...++.+++..+.
T Consensus 84 ~L~~L~~~G---~~l~I~T~~-~~~~~~~~l~~lgi~--~~f~~-------------------~k~K~~~l~~~~~~lg~ 138 (211)
T 3ij5_A 84 GIRCLITSD---IDVAIITGR-RAKLLEDRANTLGIT--HLYQG-------------------QSDKLVAYHELLATLQC 138 (211)
T ss_dssp HHHHHHHTT---CEEEEECSS-CCHHHHHHHHHHTCC--EEECS-------------------CSSHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCCc--hhhcc-------------------cCChHHHHHHHHHHcCc
Confidence 889999999 999999998 47788888776 653 22221 04689999999988876
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+ +.++++||||.+|++|+..|+++++++..
T Consensus 139 ~-~~~~~~vGDs~nDi~~~~~ag~~~a~~~~ 168 (211)
T 3ij5_A 139 Q-PEQVAYIGDDLIDWPVMAQVGLSVAVADA 168 (211)
T ss_dssp C-GGGEEEEECSGGGHHHHTTSSEEEECTTS
T ss_pred C-cceEEEEcCCHHHHHHHHHCCCEEEeCCc
Confidence 3 57899999999999999999999999744
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.05 E-value=1.3e-05 Score=80.39 Aligned_cols=90 Identities=21% Similarity=0.308 Sum_probs=69.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
...++||+.++++.|+++| +++.|+|++ +...++.+++. |+. .++.+ + .+..|...
T Consensus 161 ~~~~~~g~~~~l~~L~~~g---~~~~i~T~~-~~~~~~~~l~~~gl~--~~f~~------------i-----~~~~K~~~ 217 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMG---IKVGMITGD-NWRSAEAISRELNLD--LVIAE------------V-----LPHQKSEE 217 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCS--EEECS------------C-----CTTCHHHH
T ss_pred ccccchhHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHhCCc--eeeee------------c-----ChHHHHHH
Confidence 4689999999999999999 999999998 57777877776 653 12111 1 12468777
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 503 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~ 503 (563)
++++.. . .++++||||.+|+.|+..||++++++.
T Consensus 218 ~~~l~~-----~-~~~~~vGDs~~Di~~a~~ag~~v~~~~ 251 (287)
T 3a1c_A 218 VKKLQA-----K-EVVAFVGDGINDAPALAQADLGIAVGS 251 (287)
T ss_dssp HHHHTT-----T-CCEEEEECTTTCHHHHHHSSEEEEECC
T ss_pred HHHHhc-----C-CeEEEEECCHHHHHHHHHCCeeEEeCC
Confidence 766543 2 579999999999999999999988864
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.04 E-value=7.3e-06 Score=77.35 Aligned_cols=90 Identities=14% Similarity=0.332 Sum_probs=68.7
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
.++.++++| +++.|+|++ +...++..++. |+.. ++... ..|...++.+++..+.
T Consensus 54 ~l~~L~~~g---~~~~ivTn~-~~~~~~~~l~~lgl~~--~~~~~-------------------kpk~~~~~~~~~~~~~ 108 (191)
T 3n1u_A 54 GLKLLMAAG---IQVAIITTA-QNAVVDHRMEQLGITH--YYKGQ-------------------VDKRSAYQHLKKTLGL 108 (191)
T ss_dssp HHHHHHHTT---CEEEEECSC-CSHHHHHHHHHHTCCE--EECSC-------------------SSCHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CeEEEEeCc-ChHHHHHHHHHcCCcc--ceeCC-------------------CChHHHHHHHHHHhCC
Confidence 588899988 999999988 57778887776 6532 11110 3588889999888776
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcCC-hhHHHH
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRV 510 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~-~~L~~~ 510 (563)
+ +.++++||||.||++|+..|+++++++.. +.+++.
T Consensus 109 ~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ 145 (191)
T 3n1u_A 109 N-DDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEF 145 (191)
T ss_dssp C-GGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHH
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHh
Confidence 3 57899999999999999999999988744 344433
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.03 E-value=5.7e-05 Score=74.82 Aligned_cols=113 Identities=18% Similarity=0.195 Sum_probs=75.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccC---hHhhHHHHhC-CCCc-c--eEEeeccEecCccccCcccccCCCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSS-GLNA-L--NVHANEFSFKESISTGEIIEKVESP 457 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws---~~~I~~~L~~-~l~~-~--~I~aN~l~~~~g~~tG~~~~~~~~g 457 (563)
..++.||+.++++.++++| ++++|||+.-. .......|.. |++. . +++- .. ..
T Consensus 99 ~~~~~pG~~ell~~L~~~G---~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lil-----r~------------~~ 158 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHN---GKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYL-----KK------------DK 158 (262)
T ss_dssp CCEECTTHHHHHHHHHHTT---EEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEE-----ES------------SC
T ss_pred CCCCCccHHHHHHHHHHCC---CeEEEEeCCCccchHHHHHHHHHHcCcCcccccceec-----cC------------CC
Confidence 5678899999999999999 99999998632 2466666666 7653 1 2221 11 12
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCc
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~ 523 (563)
..|..+++.+... + ...++||||..+||.+.-... . .-+....+...+..+|-+|+-|.+
T Consensus 159 ~~K~~~r~~l~~~-G---y~iv~~vGD~~~Dl~~~~~~~-~-~~~r~a~v~~~~~~fG~~~ivlPN 218 (262)
T 3ocu_A 159 SAKAARFAEIEKQ-G---YEIVLYVGDNLDDFGNTVYGK-L-NADRRAFVDQNQGKFGKTFIMLPN 218 (262)
T ss_dssp SCCHHHHHHHHHT-T---EEEEEEEESSGGGGCSTTTTC-C-HHHHHHHHHHTGGGBTTTEEECCC
T ss_pred CChHHHHHHHHhc-C---CCEEEEECCChHHhccccccC-C-HHHHHHHHHHHHHHhCCCEEEeCC
Confidence 4688888888764 1 245779999999998743211 0 011223466677788988887764
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=98.02 E-value=4e-05 Score=75.69 Aligned_cols=98 Identities=13% Similarity=0.159 Sum_probs=64.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC---------cceEEeeccEecCccccCcccccC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN---------ALNVHANEFSFKESISTGEIIEKV 454 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~---------~~~I~aN~l~~~~g~~tG~~~~~~ 454 (563)
...+.||+.++++. | +++.|+|.+ +...++..|+. ..+ ....+.. .|+. ..+|
T Consensus 123 ~~~~~pgv~e~L~~----g---~~l~i~Tn~-~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~--~f~~-~~~g------ 185 (253)
T 2g80_A 123 KAPVYADAIDFIKR----K---KRVFIYSSG-SVKAQKLLFGYVQDPNAPAHDSLDLNSYIDG--YFDI-NTSG------ 185 (253)
T ss_dssp CBCCCHHHHHHHHH----C---SCEEEECSS-CHHHHHHHHHSBCCTTCTTSCCBCCGGGCCE--EECH-HHHC------
T ss_pred cCCCCCCHHHHHHc----C---CEEEEEeCC-CHHHHHHHHHhhcccccccccccchHhhcce--EEee-eccC------
Confidence 46789999999988 6 899999998 67788887764 111 0000000 0111 1111
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
+--....+...+++.+.. +.++++||||.+|+.+...||+. |.+.
T Consensus 186 --~KP~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i~v~ 231 (253)
T 2g80_A 186 --KKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLAS 231 (253)
T ss_dssp --CTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred --CCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEc
Confidence 111246677777777763 57899999999999999999984 4443
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.2e-05 Score=72.35 Aligned_cols=104 Identities=13% Similarity=0.132 Sum_probs=69.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcceEEeeccEecCccccC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALNVHANEFSFKESISTG 448 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG 448 (563)
.+.+.||+.++++.|+++| +++.|+|.+ +. ..++..|+. |.....++.......+
T Consensus 25 ~~~~~~g~~~~l~~L~~~g---~~~~i~Tn~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~----- 95 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQAD---WTVVLATNQ-SGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDD----- 95 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTT---CEEEEEEEC-TTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTS-----
T ss_pred HceECcCHHHHHHHHHHCC---CEEEEEECC-CccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCC-----
Confidence 4678999999999999999 999999987 33 345555554 4112233321110000
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
.+..+--+...++..++..+.+ +.++++||||.+|+.++..||+ .|.+.
T Consensus 96 ----~~~~~KP~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 145 (179)
T 3l8h_A 96 ----GCACRKPLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQ 145 (179)
T ss_dssp ----CCSSSTTSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEEC
Confidence 0111222446778888877763 5789999999999999999998 44554
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-06 Score=82.49 Aligned_cols=80 Identities=10% Similarity=-0.007 Sum_probs=55.1
Q ss_pred ccCCCCchHHHHHHHHHHc-CCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 384 ERLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~-g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
....+.||+.++++.++++ | ++++|+|++ +...++..|+. |+ |+ .+.++
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g---~~~~ivT~~-~~~~~~~~l~~~gl-----------f~-~i~~~------------- 120 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPD---TQVFICTSP-LLKYHHCVGEKYRW-----------VE-QHLGP------------- 120 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTT---EEEEEEECC-CSSCTTTHHHHHHH-----------HH-HHHCH-------------
T ss_pred ccCccCcCHHHHHHHHHhCCC---CeEEEEeCC-ChhhHHHHHHHhCc-----------hh-hhcCH-------------
Confidence 3568899999999999998 8 999999988 45566655544 32 11 11111
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCc----hHHhh-hcCc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGD----LLCLL-EADI 497 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~D----l~~l~-~Ad~ 497 (563)
+.++..+. .+.++++||||.+| +.+.. .|++
T Consensus 121 ----~~~~~~~~-~~~~~~~vgDs~~dD~~~i~~A~~~aG~ 156 (193)
T 2i7d_A 121 ----QFVERIIL-TRDKTVVLGDLLIDDKDTVRGQEETPSW 156 (193)
T ss_dssp ----HHHTTEEE-CSCGGGBCCSEEEESSSCCCSSCSSCSS
T ss_pred ----HHHHHcCC-CcccEEEECCchhhCcHHHhhccccccc
Confidence 12333333 24689999999999 77777 7776
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=2.4e-05 Score=71.15 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=66.5
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
.++.++++| ++++|+|++ +...++..++. ++. .++.. ...|...++.+++..+.
T Consensus 39 ~l~~l~~~g---~~~~i~T~~-~~~~~~~~~~~~gl~--~~~~~-------------------~kpk~~~~~~~~~~~~~ 93 (164)
T 3e8m_A 39 GIFWAHNKG---IPVGILTGE-KTEIVRRRAEKLKVD--YLFQG-------------------VVDKLSAAEELCNELGI 93 (164)
T ss_dssp HHHHHHHTT---CCEEEECSS-CCHHHHHHHHHTTCS--EEECS-------------------CSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CEEEEEeCC-ChHHHHHHHHHcCCC--Eeecc-------------------cCChHHHHHHHHHHcCC
Confidence 788899988 999999988 57788888775 542 12211 14588899999888776
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+ +.++++||||.+|+.++..|++++++++.
T Consensus 94 ~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~ 123 (164)
T 3e8m_A 94 N-LEQVAYIGDDLNDAKLLKRVGIAGVPASA 123 (164)
T ss_dssp C-GGGEEEECCSGGGHHHHTTSSEEECCTTS
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCeEEcCCh
Confidence 3 57899999999999999999999888644
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.2e-05 Score=91.12 Aligned_cols=91 Identities=22% Similarity=0.294 Sum_probs=71.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-++||+..+.++.++++| +.++++|+. +......+.+. |+. +++++ ..+.+|.+.+
T Consensus 553 D~i~~~~~~aI~~L~~~G---i~v~mlTGd-~~~~a~~ia~~lgi~--~v~a~-----------------~~P~~K~~~v 609 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSG---IEIVMLTGD-SKRTAEAVAGTLGIK--KVVAE-----------------IMPEDKSRIV 609 (736)
T ss_dssp CCBCSSHHHHHHHHHHHT---CEEEEECSS-CHHHHHHHHHHHTCC--CEECS-----------------CCHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCC--EEEEe-----------------cCHHHHHHHH
Confidence 379999999999999999 999999987 45556665554 653 22221 1334799999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++.+. +..+.++|||.||.+||..||+||+++..
T Consensus 610 ~~l~~~-----g~~V~~vGDG~ND~paL~~AdvGIAmg~g 644 (736)
T 3rfu_A 610 SELKDK-----GLIVAMAGDGVNDAPALAKADIGIAMGTG 644 (736)
T ss_dssp HHHHHH-----SCCEEEEECSSTTHHHHHHSSEEEEESSS
T ss_pred HHHHhc-----CCEEEEEECChHhHHHHHhCCEEEEeCCc
Confidence 998874 35799999999999999999999999854
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00011 Score=72.61 Aligned_cols=116 Identities=16% Similarity=0.190 Sum_probs=75.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccC---hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws---~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
..++.||+.++++.++++| ++++|||+.-+ .+.....|.. |++... .+.+.+.+ ....|
T Consensus 99 ~~~~~pg~~ell~~L~~~G---~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~~Lilr~------------~~~~K 161 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANG---GTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--DKTLLLKK------------DKSNK 161 (260)
T ss_dssp CCEECTTHHHHHHHHHHTT---CEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--TTTEEEES------------SCSSS
T ss_pred CCCCCccHHHHHHHHHHCC---CeEEEEeCCCccccHHHHHHHHHHcCcCccc--cceeEecC------------CCCCh
Confidence 4678899999999999999 99999998732 2466666766 764310 00111111 12468
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~ 523 (563)
..+++.+.+. ....++||||+.+|+.+.-... -.-+....+...+..+|-+|+-|.+
T Consensus 162 ~~~r~~L~~~----gy~iv~~iGD~~~Dl~~~~~~~--~~~~r~a~v~~~~~~fG~~~ivlPN 218 (260)
T 3pct_A 162 SVRFKQVEDM----GYDIVLFVGDNLNDFGDATYKK--SNAERRDFVAKNSKAFGKKFIVLPN 218 (260)
T ss_dssp HHHHHHHHTT----TCEEEEEEESSGGGGCGGGTTC--CHHHHHHHHHHTGGGBTTTEEECCC
T ss_pred HHHHHHHHhc----CCCEEEEECCChHHcCcccccC--CHHHHHHHHHHHHHHhCCCEEEeCC
Confidence 8888888762 1345789999999998743221 0111223466677889988887764
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.8e-05 Score=88.59 Aligned_cols=90 Identities=22% Similarity=0.293 Sum_probs=71.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-++||+..+.++.++++| +++.++|+. .....+.+.+. |+. .++++ ..+.+|...+
T Consensus 456 D~l~~~~~~~i~~L~~~G---i~v~~~TGd-~~~~a~~ia~~lgi~--~~~~~-----------------~~P~~K~~~v 512 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMG---IKVGMITGD-NWRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEV 512 (645)
T ss_dssp CCCTTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHHH
T ss_pred CCchhHHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCCC--EEEEe-----------------CCHHhHHHHH
Confidence 379999999999999999 999999987 46666665554 653 22221 2345899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++... ..++++|||.||.+|++.||+||.+++.
T Consensus 513 ~~l~~~------~~v~~vGDg~ND~~al~~A~vgiamg~g 546 (645)
T 3j08_A 513 KKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG 546 (645)
T ss_dssp HHHTTT------CCEEEEECSSSCHHHHHHSSEEEEECCC
T ss_pred HHHhhC------CeEEEEeCCHhHHHHHHhCCEEEEeCCC
Confidence 988752 5799999999999999999999999844
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.94 E-value=1.7e-06 Score=83.15 Aligned_cols=45 Identities=18% Similarity=0.258 Sum_probs=38.3
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCccEEE
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVI 501 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~givi 501 (563)
.+..|...++.+++..+.+ ..++++|||| .||+.|++.||++++.
T Consensus 174 ~~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~~~~aG~~~~~ 219 (250)
T 2c4n_A 174 VGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETIL 219 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEE
T ss_pred eCCCCHHHHHHHHHHcCCC-cceEEEECCCchhHHHHHHHcCCeEEE
Confidence 3556889999999988874 5899999999 7999999999998654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.4e-05 Score=92.56 Aligned_cols=109 Identities=18% Similarity=0.170 Sum_probs=73.5
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCc-cccC-ccc--------ccCC
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKES-ISTG-EII--------EKVE 455 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g-~~tG-~~~--------~~~~ 455 (563)
++||+..+.++.|++.| +.+.++|+- ...-...+-++ |+....+-++.+...+. ..++ ++. ---+
T Consensus 535 p~R~ea~~aI~~l~~aG---I~v~MiTGD-~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv 610 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLG---LSIKMLTGD-AVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEV 610 (920)
T ss_dssp CCCHHHHHHHHHHHHHT---CEEEEEESS-CHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESC
T ss_pred cccccHHHHHHHHhhcC---ceEEEEcCC-CHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEe
Confidence 79999999999999999 999999986 34444444434 66321111122211110 1111 010 0124
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
++.+|.+.++.+.+. +..+.++|||.||.+||+.||+||+++..
T Consensus 611 ~P~~K~~iV~~Lq~~-----g~~Vam~GDGvNDapaLk~AdvGIAmg~g 654 (920)
T 1mhs_A 611 FPQHKYNVVEILQQR-----GYLVAMTGDGVNDAPSLKKADTGIAVEGS 654 (920)
T ss_dssp CSTHHHHHHHHHHTT-----TCCCEECCCCGGGHHHHHHSSEEEEETTS
T ss_pred CHHHHHHHHHHHHhC-----CCeEEEEcCCcccHHHHHhCCcCcccccc
Confidence 567999999998763 35788999999999999999999999854
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=3.4e-05 Score=72.31 Aligned_cols=83 Identities=16% Similarity=0.310 Sum_probs=65.9
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
+++.++++| ++++|+|++ +...++..++. |+. .++. .+..|...++.+++..+.
T Consensus 61 ~l~~L~~~g---~~v~ivT~~-~~~~~~~~l~~lgl~--~~~~-------------------~~kpk~~~~~~~~~~~g~ 115 (188)
T 2r8e_A 61 GIRCALTSD---IEVAIITGR-KAKLVEDRCATLGIT--HLYQ-------------------GQSNKLIAFSDLLEKLAI 115 (188)
T ss_dssp HHHHHHTTT---CEEEEECSS-CCHHHHHHHHHHTCC--EEEC-------------------SCSCSHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CeEEEEeCC-ChHHHHHHHHHcCCc--eeec-------------------CCCCCHHHHHHHHHHcCC
Confidence 788888888 999999998 56777777766 653 2221 124688899999888776
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcC
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGS 503 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~ 503 (563)
+ +.+++|||||.+|+.++..|+++++++.
T Consensus 116 ~-~~~~~~iGD~~~Di~~a~~ag~~~~~~~ 144 (188)
T 2r8e_A 116 A-PENVAYVGDDLIDWPVMEKVGLSVAVAD 144 (188)
T ss_dssp C-GGGEEEEESSGGGHHHHTTSSEEEECTT
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCEEEecC
Confidence 3 4789999999999999999999988863
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.6e-05 Score=88.55 Aligned_cols=90 Identities=22% Similarity=0.293 Sum_probs=70.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-++||+..+.++.++++| ++++++|+. .......+.+. |+. .++++ ..+.+|...+
T Consensus 534 D~~~~~~~~~i~~l~~~G---i~v~~~TGd-~~~~a~~ia~~lgi~--~~~~~-----------------~~P~~K~~~v 590 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMG---IKVGMITGD-NWRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEV 590 (723)
T ss_dssp CCSCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHHH
T ss_pred CCcchhHHHHHHHHHHCC---CEEEEECCC-CHHHHHHHHHHcCCc--EEEcc-----------------CCHHHHHHHH
Confidence 379999999999999999 999999986 45556655544 553 22222 2345899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++... ..++++|||.||.+||..||+||.++..
T Consensus 591 ~~l~~~------~~v~~vGDg~ND~~al~~A~vgiamg~g 624 (723)
T 3j09_A 591 KKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG 624 (723)
T ss_dssp HHHTTT------CCEEEEECSSTTHHHHHHSSEEEECCCC
T ss_pred HHHhcC------CeEEEEECChhhHHHHhhCCEEEEeCCC
Confidence 988752 5799999999999999999999999844
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.87 E-value=6.7e-05 Score=70.17 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=72.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccCh---HhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---DLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
.+.+.||+.++++.|+++| ++++|+|.+. . ..+...|+. |+.. ..|++..-.. .....+-
T Consensus 32 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~----------~~~~~~K 97 (189)
T 3ib6_A 32 EVVLRKNAKETLEKVKQLG---FKQAILSNTA-TSDTEVIKRVLTNFGIIDYFDFIYASNSEL----------QPGKMEK 97 (189)
T ss_dssp TCCBCTTHHHHHHHHHHTT---CEEEEEECCS-SCCHHHHHHHHHHTTCGGGEEEEEECCTTS----------STTCCCT
T ss_pred CceeCcCHHHHHHHHHHCC---CEEEEEECCC-ccchHHHHHHHHhcCchhheEEEEEccccc----------cccCCCC
Confidence 4689999999999999999 9999999873 4 677888876 6532 1233222100 0001112
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCcc-EEEc
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-ivi~ 502 (563)
-+...++..++..+. .+..+++|||+ .+|+.+...+|+. |.+.
T Consensus 98 P~p~~~~~~~~~~~~-~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~ 142 (189)
T 3ib6_A 98 PDKTIFDFTLNALQI-DKTEAVMVGNTFESDIIGANRAGIHAIWLQ 142 (189)
T ss_dssp TSHHHHHHHHHHHTC-CGGGEEEEESBTTTTHHHHHHTTCEEEEEC
T ss_pred cCHHHHHHHHHHcCC-CcccEEEECCCcHHHHHHHHHCCCeEEEEC
Confidence 244677777777776 35789999999 7999999999994 4443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.86 E-value=2.2e-05 Score=92.38 Aligned_cols=105 Identities=19% Similarity=0.155 Sum_probs=74.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcc--------------
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEI-------------- 450 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~-------------- 450 (563)
-++|||..+.++.|++.| +++.++|+. .......+.++ |+.... + .+++...+|.-
T Consensus 602 D~lr~~~~~~I~~l~~~G---i~v~miTGD-~~~ta~~ia~~lgi~~~~---~--~i~~~~~~g~~~~~l~~~~~~~~~~ 672 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAG---IRVIMITGD-NKGTAIAICRRIGIFGEN---E--EVADRAYTGREFDDLPLAEQREACR 672 (995)
T ss_dssp CCBCTTHHHHHHHHHHTT---CEEEEEESS-CHHHHHHHHHHHTSSCTT---C--CCTTTEEEHHHHHTSCHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHcC---CEEEEECCC-CHHHHHHHHHHcCcCCCC---C--cccceEEEchhhhhCCHHHHHHHHh
Confidence 489999999999999999 999999997 45555555554 653210 0 00111122210
Q ss_pred ---cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 451 ---IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 451 ---~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
..--+++.+|.+.++.+.+. +..+.++|||.||.+||+.||+||+++..
T Consensus 673 ~~~v~~r~~P~~K~~~v~~l~~~-----g~~v~~~GDG~ND~~alk~Advgiamg~g 724 (995)
T 3ar4_A 673 RACCFARVEPSHKSKIVEYLQSY-----DEITAMTGDGVNDAPALKKAEIGIAMGSG 724 (995)
T ss_dssp HCCEEESCCSSHHHHHHHHHHTT-----TCCEEEEECSGGGHHHHHHSTEEEEETTS
T ss_pred hCcEEEEeCHHHHHHHHHHHHHC-----CCEEEEEcCCchhHHHHHHCCeEEEeCCC
Confidence 00123567999999998863 35789999999999999999999999843
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.86 E-value=4.6e-05 Score=66.39 Aligned_cols=110 Identities=18% Similarity=0.144 Sum_probs=71.0
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
+.||+.++++.++++| ++++|+|.+ +...++..++. ++.. ..+++..- ......+...+
T Consensus 19 ~~~~~~~~l~~L~~~G---~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~i~~~~~--------------~~~~Kp~~~~~ 80 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNG---VGTVILSND-PGGLGAAPIRELETNGVVDKVLLSGE--------------LGVEKPEEAAF 80 (137)
T ss_dssp HHHHHHHHHHHHHHTT---CEEEEEECS-CCGGGGHHHHHHHHTTSSSEEEEHHH--------------HSCCTTSHHHH
T ss_pred cCccHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHCChHhhccEEEEecc--------------CCCCCCCHHHH
Confidence 3467788999999998 999999998 46667776665 4321 23333220 00111244667
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCChhHH-HHHHhhCC
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLR-RVGSQFGV 516 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~~L~-~~~~~~gi 516 (563)
+.+++..+.. +.++++|||+.+|+.++..+++ +|.+.....+. ++.+..|+
T Consensus 81 ~~~~~~~~~~-~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~~~~~l~~~~~~ 133 (137)
T 2pr7_A 81 QAAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVGVYYQQFDRAVVEIVGLFGL 133 (137)
T ss_dssp HHHHHHTTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSCHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCEEEEeCChHHHHHHHHHHhCC
Confidence 7777777653 5789999999999999999998 44444433332 23344443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00018 Score=71.32 Aligned_cols=87 Identities=9% Similarity=0.142 Sum_probs=51.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccC--hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws--~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++|+.++++| +++.|+|++-. ...+...|.. |+..+ ....+.+ .+.- ..|.
T Consensus 99 ~~~~~pg~~e~L~~L~~~G---i~i~iaTnr~~~~~~~~~~~L~~~Gl~~v--~~~~vi~-----~~~~-------~~K~ 161 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKG---VDIYYISNRKTNQLDATIKNLERVGAPQA--TKEHILL-----QDPK-------EKGK 161 (258)
T ss_dssp CCEECTTHHHHHHHHHHTT---CEEEEEEEEEGGGHHHHHHHHHHHTCSSC--STTTEEE-----ECTT-------CCSS
T ss_pred CCCcCccHHHHHHHHHHCC---CEEEEEcCCchhHHHHHHHHHHHcCCCcC--CCceEEE-----CCCC-------CCCc
Confidence 4578899999999999999 99999998721 2345555555 65410 0011111 1110 0122
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHh
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL 492 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l 492 (563)
.....+... + ...++|||||.+|+.+.
T Consensus 162 ~~~~~~~~~-~---~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 162 EKRRELVSQ-T---HDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp HHHHHHHHH-H---EEEEEEEESSGGGSTTC
T ss_pred HHHHHHHHh-C---CCceEEeCCCHHHhccc
Confidence 222223321 1 24588999999999887
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=3.5e-05 Score=71.57 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=65.3
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEcccc--------------ChHhhHHHHhC-CCCcceEE-eeccEecCccccC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW--------------CGDLIRASFSS-GLNALNVH-ANEFSFKESISTG 448 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gw--------------s~~~I~~~L~~-~l~~~~I~-aN~l~~~~g~~tG 448 (563)
.+.+.||+.++++.|+++| ++++|+|.+. ....++..|+. ++....|+ |-... .+. .|
T Consensus 40 ~~~~~pg~~e~L~~L~~~G---~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s~~~~-~~~--~~ 113 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAG---YKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLP-ADE--CD 113 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTT---EEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCG-GGC--CS
T ss_pred HCcCCccHHHHHHHHHHCC---CEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEcCCCC-ccc--cc
Confidence 4678999999999999999 9999999871 14566777766 66422332 21000 000 00
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEcCC
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS 504 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~~~ 504 (563)
..--|...+..+++..+. .+.+++||||+.+|+.++..+++. |.+...
T Consensus 114 -------~~KP~p~~~~~~~~~~gi-~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 114 -------CRKPKVKLVERYLAEQAM-DRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp -------SSTTSCGGGGGGC----C-CGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred -------ccCCCHHHHHHHHHHcCC-CHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 011122333444444444 257899999999999999999994 555433
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.71 E-value=2.3e-05 Score=90.71 Aligned_cols=103 Identities=19% Similarity=0.208 Sum_probs=71.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCc----------cc---
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGE----------II--- 451 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~----------~~--- 451 (563)
-++||+..+.++.|++.| +.+.++|+- .......+-++ |+.. +++ ++...+|. +.
T Consensus 487 Dp~R~~a~~aI~~l~~aG---I~v~MiTGD-~~~tA~~iA~~lGi~~-~~~------~~~~l~g~~~~~~~~~~~l~~~~ 555 (885)
T 3b8c_A 487 DPPRHDSAETIRRALNLG---VNVKMITGD-QLAIGKETGRRLGMGT-NMY------PSSALLGTHKDANLASIPVEELI 555 (885)
T ss_dssp CCCCHHHHHHHHHHHHTT---CCCEEEESS-CHHHHTHHHHTTTCTT-CCS------TTSSCCBGGGGTTSCCSCHHHHH
T ss_pred cccchhHHHHHHHHHHcC---CcEEEEcCC-ChHHHHHHHHHhCCcc-ccC------CcceeeccccccccchhHHHHHH
Confidence 489999999999999999 999999986 34444444444 5531 000 01111110 00
Q ss_pred -----ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 452 -----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 452 -----~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
---+++.+|.+.++.+.+. +..+.++|||.||.+||+.||+||+++..
T Consensus 556 ~~~~v~arv~P~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdvGIAmg~g 608 (885)
T 3b8c_A 556 EKADGFAGVFPEHKYEIVKKLQER-----KHIVGMTGDGVNDAPALKKADIGIAVADA 608 (885)
T ss_dssp HTSCCEECCCHHHHHHHHHHHHHT-----TCCCCBCCCSSTTHHHHHHSSSCCCCSSS
T ss_pred hhCcEEEEECHHHHHHHHHHHHHC-----CCeEEEEcCCchhHHHHHhCCEeEEeCCc
Confidence 0013456899999998863 35688999999999999999999999854
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.69 E-value=6.9e-05 Score=88.27 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=70.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEE---ee--ccEe-----c---CccccCc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVH---AN--EFSF-----K---ESISTGE 449 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~---aN--~l~~-----~---~g~~tG~ 449 (563)
-++||+..+.++.|++.| +++.++|+- .......+.+. |+.. ..++ +. ...+ + ....+|.
T Consensus 598 Dplr~~~~~aI~~l~~aG---I~v~miTGD-~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~ 673 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAG---IKVIMVTGD-HPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGS 673 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHH
T ss_pred CCCChhHHHHHHHHHHcC---CEEEEECCC-CHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcH
Confidence 489999999999999999 999999986 34444444444 5421 0000 00 0000 0 0011111
Q ss_pred -------------------ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 450 -------------------IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 450 -------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
...--+++.+|.+.++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 674 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~V~~iGDG~ND~paLk~AdvGIAmg 740 (1028)
T 2zxe_A 674 DLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMG 740 (1028)
T ss_dssp HHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-----TCCEEEEECSGGGHHHHHHSSEEEEES
T ss_pred HhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-----CCEEEEEcCCcchHHHHHhCCceEEeC
Confidence 000013456899999888763 357889999999999999999999998
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=97.69 E-value=1.3e-05 Score=75.64 Aligned_cols=83 Identities=10% Similarity=0.048 Sum_probs=55.1
Q ss_pred cCCCCchHHHHHHHHHHc-CCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~-g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
.+.+.||+.++++.|+++ | +++.|+|++ +...++..++. ++... .|.
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g---~~~~ivT~~-~~~~~~~~l~~~~l~~~----------------~f~----------- 121 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQN---TDVFICTSP-IKMFKYCPYEKYAWVEK----------------YFG----------- 121 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTT---EEEEEEECC-CSCCSSHHHHHHHHHHH----------------HHC-----------
T ss_pred cCCcCcCHHHHHHHHHhcCC---CeEEEEeCC-ccchHHHHHHHhchHHH----------------hch-----------
Confidence 578899999999999998 8 999999998 35555555543 32100 000
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCc----hHHhh-hcCc-cEEE
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGD----LLCLL-EADI-GIVI 501 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~D----l~~l~-~Ad~-givi 501 (563)
...++..+. .+.++++||||..| +.+.. .|++ .|.+
T Consensus 122 --~~~~~~l~~-~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~ 163 (197)
T 1q92_A 122 --PDFLEQIVL-TRDKTVVSADLLIDDRPDITGAEPTPSWEHVLF 163 (197)
T ss_dssp --GGGGGGEEE-CSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEE
T ss_pred --HHHHHHhcc-CCccEEEECcccccCCchhhhcccCCCceEEEe
Confidence 011122222 24678999999999 88888 8887 3444
|
| >2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0025 Score=63.16 Aligned_cols=205 Identities=14% Similarity=0.072 Sum_probs=115.4
Q ss_pred CCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 008499 9 PSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELR 88 (563)
Q Consensus 9 ~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~ 88 (563)
.++...+|+++|-......-..+-++||+..+.+|+++.+.++.||.|=|++....-.+...... ++....... .
T Consensus 26 ~~~~~~~~~~~Lr~~T~~~H~~~e~~~~~~~ll~g~~~~e~Y~~~L~~~y~vy~~LE~~l~~~~~---~p~l~~~~~--~ 100 (264)
T 2q32_A 26 NQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKD---HPAFAPLYF--P 100 (264)
T ss_dssp ---CTTSHHHHHHHHSHHHHHHHHTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT---CTTTGGGCC--H
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc---ChHhHhhcC--H
Confidence 44556689999988776555556689999999999999999999999999998886666554322 110000000 0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH-
Q 008499 89 KGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY- 167 (563)
Q Consensus 89 ~~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y- 167 (563)
..+.+.-.+-+++..-.|-+..+..+++|++..|+.++..++.... ..+++.++ -+|
T Consensus 101 ~el~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P-------------------~~llgh~Y---v~y~ 158 (264)
T 2q32_A 101 MELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIGQNEP-------------------ELLVAHAY---TRYM 158 (264)
T ss_dssp HHHCCHHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHH---HHHH
T ss_pred hhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCH-------------------HHHHHHHH---HHHH
Confidence 0000111111222222365544456789999999999997775332 12233332 334
Q ss_pred HH------HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhc
Q 008499 168 AF------LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFC 241 (563)
Q Consensus 168 ~~------ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~ 241 (563)
.. |++.+.+..+.. +...=-.+...+...+-..+-..+++.||++ .+++++++++.+-=..+-++=.+-++
T Consensus 159 g~lsGGqii~k~l~k~lgL~-~~~~g~~Fy~f~g~~d~~~~k~~fr~~Ld~l--~ld~ee~~~iI~eA~~aF~ln~~if~ 235 (264)
T 2q32_A 159 GDLSGGQVLKKVAQRALKLP-STGEGTQFYLFENVDNAQQFKQLYRARMNAL--DLNMKTKERIVEEANKAFEYNMQIFN 235 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-TTCTTCGGGCCTTCSCHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHhcCCC-CCCccceeeccCCCCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 233333322211 1011123344455333344566788888987 46888877776665555555455554
Q ss_pred cC
Q 008499 242 AQ 243 (563)
Q Consensus 242 ~a 243 (563)
..
T Consensus 236 eL 237 (264)
T 2q32_A 236 EL 237 (264)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.54 E-value=7.4e-05 Score=74.51 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=48.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~ 512 (563)
.+.+|...++.+++..+.+ ...+++||||.||++|++.|++||+++ +.+.+++.|.
T Consensus 206 ~~~~K~~al~~l~~~lgi~-~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~ 262 (285)
T 3pgv_A 206 GGVSKGHALEAVAKMLGYT-LSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHP 262 (285)
T ss_dssp TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCT
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCC
Confidence 4667999999999988874 578999999999999999999999998 5567776663
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=97.53 E-value=7.8e-05 Score=72.97 Aligned_cols=56 Identities=25% Similarity=0.386 Sum_probs=46.9
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
..+.+|...++.+++..+.+ ..++++||||.||++|+..|++||+++ +.+.+++.+
T Consensus 179 ~~~~~K~~~l~~l~~~lgi~-~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A 235 (258)
T 2pq0_A 179 PAGGSKAEGIRMMIEKLGID-KKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVA 235 (258)
T ss_dssp ESSCCHHHHHHHHHHHHTCC-GGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTC
T ss_pred ECCCChHHHHHHHHHHhCCC-HHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhC
Confidence 34678999999999988874 578999999999999999999999997 445566444
|
| >1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0058 Score=60.05 Aligned_cols=196 Identities=17% Similarity=0.201 Sum_probs=112.5
Q ss_pred hHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHH
Q 008499 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK-GVLE 93 (563)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~-~i~~ 93 (563)
+|+++|-......-..+-++||+..+..|.++.+.++.||.|=|++....-.+... ..+.+. +..... .+.+
T Consensus 3 ~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~----~~~~p~---l~~~~~~el~R 75 (250)
T 1wov_A 3 NLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYSALEAALRQ----HRDNEI---ISAIYFPELNR 75 (250)
T ss_dssp CHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHH----TTTSHH---HHHHCCGGGCC
T ss_pred hHHHHHHHHHHHHHHHHHchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hccChh---hhhhccHhhhh
Confidence 57888877665444444578999999999999999999999999888866555443 222111 111100 0111
Q ss_pred HHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH-HH---
Q 008499 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY-AF--- 169 (563)
Q Consensus 94 E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y-~~--- 169 (563)
.-.+-+++..-.|-+..+..+|+|++..|++++..++..+. ...++.+ +-+| ..
T Consensus 76 ~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P-------------------~~llgh~---Yv~y~g~lsG 133 (250)
T 1wov_A 76 TDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEP-------------------ELLIAHC---YTRYLGDLSG 133 (250)
T ss_dssp HHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHH---HHHHHHHTTH
T ss_pred HHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHhhcCH-------------------HHHHHHH---HHHHHHHHhH
Confidence 11111222222255444456889999999999998775332 1233333 3344 22
Q ss_pred ---HHHHHHhhccCCCCcccccccccccCCh---hHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 170 ---LGKEFHALLNANEGNHPYTKWIDNYSSE---SFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 170 ---ig~~~~~~~~~~~~~~~y~~Wi~~y~s~---~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
|++.+.+..+. +...=-.+...+..+ +-...-..+++.||++ .+++++++++.+-=..+-++=.+-+++-
T Consensus 134 Gq~i~~~l~k~l~L--~~~~g~~fy~f~~~~~~~d~~~~k~~fr~~Ld~l--~l~~~e~~~ii~eA~~aF~ln~~if~eL 209 (250)
T 1wov_A 134 GQSLKNIIRSALQL--PEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSL--PLDEATINRIVEEANYAFSLNREVMHDL 209 (250)
T ss_dssp HHHHHHHHHHHTTC--CTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCC--CCcccceeeccCCccccccHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23334432221 111112233444433 4455677888999987 4688888777766666655555555544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.52 E-value=7.2e-05 Score=73.51 Aligned_cols=71 Identities=24% Similarity=0.356 Sum_probs=53.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecC---chhHHhHHh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQKE 531 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~~ 531 (563)
.+.+|...++.+++.++.+ ...+++||||.||++|++.|++||+++ +.+.+++.| .++--+ .|+...++.
T Consensus 191 ~~~~K~~~l~~l~~~lgi~-~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~A-----d~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 191 AGTSKATGLSLFADYYRVK-VSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVA-----DFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTC-----SEECCCTTTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHcCCC-HHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhc-----CEeeCCCCcCHHHHHHHH
Confidence 4668999999999988874 578999999999999999999999998 446666544 344322 355555544
Q ss_pred h
Q 008499 532 Y 532 (563)
Q Consensus 532 ~ 532 (563)
|
T Consensus 265 ~ 265 (268)
T 3r4c_A 265 F 265 (268)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0001 Score=86.86 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=68.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc--e----------EEeeccEec---CccccCc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL--N----------VHANEFSFK---ESISTGE 449 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~--~----------I~aN~l~~~---~g~~tG~ 449 (563)
-++||+..+.++.|+++| +.++++|+- ...-...+.+. |+... . +..+...-+ ....+|.
T Consensus 603 Dp~r~~~~~aI~~l~~aG---I~vvmiTGd-~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAG---IRVIMVTGD-HPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM 678 (1034)
T ss_pred CCCchhHHHHHHHHHHcC---CeEEEEeCC-CHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence 389999999999999999 999999986 34444444444 44210 0 000000000 0011111
Q ss_pred c-------------------cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 450 I-------------------IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 450 ~-------------------~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
. ..--+++.+|.+.++.+.+. +..++++|||.||.+||+.||+||+++
T Consensus 679 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-----g~~V~a~GDG~ND~~mLk~A~vGIAMg 745 (1034)
T 3ixz_A 679 QLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-----GAIVAVTGDGVNDSPALKKADIGVAMG 745 (1034)
T ss_pred hhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-----CCEEEEECCcHHhHHHHHHCCeeEEeC
Confidence 0 00113455788888776652 356889999999999999999999997
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=97.50 E-value=5e-05 Score=72.80 Aligned_cols=91 Identities=8% Similarity=0.018 Sum_probs=52.6
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC---CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS---GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~---~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
..||..++++.++++| +++.|+|++. ...++..++. -++. ++++. .. ..+.+.-. +...+
T Consensus 89 ~~~~~~e~l~~L~~~G---~~l~ivTn~~-~~~~~~~l~~l~~~f~~--i~~~~------~~-~~~~~~KP----~p~~~ 151 (211)
T 2b82_A 89 PKEVARQLIDMHVRRG---DAIFFVTGRS-PTKTETVSKTLADNFHI--PATNM------NP-VIFAGDKP----GQNTK 151 (211)
T ss_dssp ECHHHHHHHHHHHHHT---CEEEEEECSC-CCSSCCHHHHHHHHTTC--CTTTB------CC-CEECCCCT----TCCCS
T ss_pred CcHHHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHHHHhcCc--ccccc------ch-hhhcCCCC----CHHHH
Confidence 4779999999999999 9999999873 3333222221 1110 00000 00 00000001 11233
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
...+++.+ - +++||||.+|+.+...||+..+
T Consensus 152 ~~~~~~~g----~-~l~VGDs~~Di~aA~~aG~~~i 182 (211)
T 2b82_A 152 SQWLQDKN----I-RIFYGDSDNDITAARDVGARGI 182 (211)
T ss_dssp HHHHHHTT----E-EEEEESSHHHHHHHHHTTCEEE
T ss_pred HHHHHHCC----C-EEEEECCHHHHHHHHHCCCeEE
Confidence 44444443 2 9999999999999999998433
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.49 E-value=9.2e-05 Score=73.62 Aligned_cols=71 Identities=21% Similarity=0.345 Sum_probs=54.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecC---chhHHhHHh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQKE 531 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~~ 531 (563)
.+..|...++.+++..+.+ ...+++||||.||++|+..|++||+++ +.+.+++.| .++--+ .|+...++.
T Consensus 199 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A-----d~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 199 KGVSKEAGLALVASELGLS-MDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKA-----DWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHS-----SEECCCTTTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhc-----CEECCCCCccHHHHHHHH
Confidence 4668999999999988874 578999999999999999999999998 446666655 344322 356555544
Q ss_pred h
Q 008499 532 Y 532 (563)
Q Consensus 532 ~ 532 (563)
+
T Consensus 273 ~ 273 (290)
T 3dnp_A 273 Y 273 (290)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=73.34 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=47.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++..+.+ ...+++||||.||++|++.|++||+++ +.+.+++.|
T Consensus 208 ~~~~K~~~l~~l~~~lgi~-~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A 263 (283)
T 3dao_A 208 KGVSKWTALSYLIDRFDLL-PDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAA 263 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHS
T ss_pred CCCcHHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhc
Confidence 4568999999999988874 578999999999999999999999998 446666555
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00041 Score=65.54 Aligned_cols=99 Identities=13% Similarity=-0.012 Sum_probs=64.9
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
+...+.||+.++++.|+++| +++.|+|+. ....+...+. .....|+|.+ . ...+--+...
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g---~~~~i~T~~-~~~~~~~~~~--~~~d~v~~~~-----~---------~~~~KP~p~~ 92 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQG---MPCAWIDEL-PEALSTPLAA--PVNDWMIAAP-----R---------PTAGWPQPDA 92 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHT---CCEEEECCS-CHHHHHHHHT--TTTTTCEECC-----C---------CSSCTTSTHH
T ss_pred ccCCcCcCHHHHHHHHHHCC---CEEEEEcCC-hHHHHHHhcC--ccCCEEEECC-----c---------CCCCCCChHH
Confidence 34678899999999999999 999999976 4555543332 1111122211 0 0111123356
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
+...+...+......+++||||.+|+.+...|++ .|.+.
T Consensus 93 ~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 93 CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 6666666665333679999999999999999998 44454
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00014 Score=71.37 Aligned_cols=55 Identities=20% Similarity=0.404 Sum_probs=46.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+..|...++.+++..+.+ ...+++||||.||++|++.|++||+++ +.+.+++.|
T Consensus 197 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A 252 (274)
T 3fzq_A 197 KDFHKGKAIKRLQERLGVT-QKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIA 252 (274)
T ss_dssp TTCSHHHHHHHHHHHHTCC-STTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHC
T ss_pred CCCCHHHHHHHHHHHcCCC-HHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhh
Confidence 4668999999999988874 578999999999999999999999998 445666544
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.43 E-value=7.3e-05 Score=73.95 Aligned_cols=74 Identities=15% Similarity=0.299 Sum_probs=49.5
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeee---cCchhHHhHHh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIP---LYPGLVKKQKE 531 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p---~~~~~~~~~~~ 531 (563)
.+.+|...++.+++..+.+ ...+++||||.||++|++.|++||+++ +.+.+++.|. ++- =..|+...++.
T Consensus 194 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~-----~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 194 RRASKGGTLSELVDQLGLT-ADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQ-----AVTLTNAENGVAAAIRK 267 (279)
T ss_dssp SSCCHHHHHHHHHHHTTCC-GGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCS-----CBC------CHHHHHC-
T ss_pred CCCChHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcc-----eeccCCCccHHHHHHHH
Confidence 4667999999999988874 578999999999999999999999997 4566776652 332 22466666665
Q ss_pred hhcC
Q 008499 532 YTEG 535 (563)
Q Consensus 532 ~~~~ 535 (563)
+..+
T Consensus 268 ~~~~ 271 (279)
T 3mpo_A 268 YALN 271 (279)
T ss_dssp ----
T ss_pred Hhcc
Confidence 5444
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00014 Score=73.13 Aligned_cols=72 Identities=14% Similarity=0.240 Sum_probs=54.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecC---chhHHhHHh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQKE 531 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~~ 531 (563)
.+.+|...++.+++..+.+ ...+++||||.||++|++.|++||+++ +.+.+++.| .++--+ .|+...+++
T Consensus 225 ~~~~K~~al~~l~~~lgi~-~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~A-----d~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 225 KGLHKGWALQQLLKRWNFT-SDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAA-----NYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHC-----SEECCCGGGTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCcC-HHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhc-----cEEcCCCCcchHHHHHHH
Confidence 4568999999999988874 578999999999999999999999998 445666555 333222 356666655
Q ss_pred hh
Q 008499 532 YT 533 (563)
Q Consensus 532 ~~ 533 (563)
+.
T Consensus 299 ~~ 300 (304)
T 3l7y_A 299 YL 300 (304)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0079 Score=59.64 Aligned_cols=201 Identities=14% Similarity=0.125 Sum_probs=112.3
Q ss_pred CcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008499 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (563)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (563)
...+|+++|-......-..+-++||+..+.+|+++.+.+..||.|=|++......+....... +..... .+- ..+
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE~~l~~~~~~-p~l~~~-~~p---eel 83 (267)
T 1j02_A 9 MSQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQN-PVYAPL-YFP---EEL 83 (267)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTC-TTTGGG-CCH---HHH
T ss_pred CchHHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccC-cHHHHh-cCH---hhh
Confidence 344799999877655444556899999999999999999999999999888866655543221 000000 000 001
Q ss_pred HHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH-H--
Q 008499 92 LEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY-A-- 168 (563)
Q Consensus 92 ~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y-~-- 168 (563)
.+.-.+-+++..-.|-+..+..++.|++..|+.++..++.... ..+++.+ +-+| .
T Consensus 84 ~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P-------------------~~llgh~---Yv~y~g~l 141 (267)
T 1j02_A 84 HRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHP-------------------ELLVAHA---YTRYLGDL 141 (267)
T ss_dssp CCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHH---HHHHHHHT
T ss_pred hhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCH-------------------HHHHHHH---HHHHHHHH
Confidence 0111111222222365544457889999999999997775332 1233333 3334 2
Q ss_pred ----HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 008499 169 ----FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242 (563)
Q Consensus 169 ----~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~ 242 (563)
.|++.+.+..+....+. =-.+..++...+-..+-..+.+.||++ .+++++++++.+--..+-++=.+-|+.
T Consensus 142 sGGqii~k~l~k~lgL~~~~~-gl~Fy~f~g~~d~~~~k~~fr~~Ld~l--~ld~ee~~~iI~eA~~aF~ln~~if~e 216 (267)
T 1j02_A 142 SGGQVLKKIAQKAMALPSSGE-GLAFFTFPSIDNPTKFKQLYRARMNTL--EMTPEVKHRVTEEAKTAFLLNIELFEE 216 (267)
T ss_dssp THHHHHHHHHHHHHTCCTTCT-TCGGGCCTTCSCHHHHHHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCC-cceeeccCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333333222111011 123344444333445567788889986 368888777666555555544444443
|
| >1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0064 Score=59.37 Aligned_cols=199 Identities=12% Similarity=0.145 Sum_probs=111.9
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHH
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK-GVL 92 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~-~i~ 92 (563)
.+|+++|-......-..+-++||++.+..|.++.+.++.||.|=|++....-.+...... ++ . +..... .+.
T Consensus 3 ~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~~~---~p-~---l~~~~~~el~ 75 (240)
T 1we1_A 3 VNLASQLREGTKKSHSMAENVGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKD---HP-I---LSHIYFPELN 75 (240)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT---ST-T---GGGGCCTTSC
T ss_pred hHHHHHHHHHHHHHHHHHHCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhccc---Cc-h---hHhhhhHhhh
Confidence 358888877665544445578999999999999999999999999988866665554322 11 0 000000 000
Q ss_pred HHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH----H
Q 008499 93 EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY----A 168 (563)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y----~ 168 (563)
+.-.+-+++..-.|-+..+..+|+|++..|+.++..++..+. ...++.++.-+-+= .
T Consensus 76 R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P-------------------~~llg~~Yv~y~g~lsGGq 136 (240)
T 1we1_A 76 RKQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVAATAP-------------------ELLVAHSYTRYLGDLSGGQ 136 (240)
T ss_dssp CHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHhhcCH-------------------HHHHHHHHHHHHHHHhHHH
Confidence 001111222222255543346789999999999998775332 12333333222111 1
Q ss_pred HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 169 ~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
.|++.+.+..+. ++. =-.+...+..++-...-...++.||++ .+++++++++.+-=..+-++=.+-+++-
T Consensus 137 ~i~~~~~~~l~L--~~~-g~~fy~f~~~~d~~~~k~~fr~~Ld~l--~l~~~e~~~ii~eA~~aF~~n~~if~eL 206 (240)
T 1we1_A 137 ILKKIAQNAMNL--HDG-GTAFYEFADIDDEKAFKNTYRQAMNDL--PIDQATAERIVDEANDAFAMNMKMFNEL 206 (240)
T ss_dssp HHHHHHHHHHTC--SSS-SCGGGCCTTCSSHHHHHHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCc--Ccc-cchhcccCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222333332221 111 123334444333445667788889986 4688888777666666555555555544
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00022 Score=74.76 Aligned_cols=109 Identities=13% Similarity=0.060 Sum_probs=69.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--c--eEEeeccEecCccccCcccccCC-CCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--L--NVHANEFSFKESISTGEIIEKVE-SPI 458 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~--~I~aN~l~~~~g~~tG~~~~~~~-~g~ 458 (563)
.+.+.||+.++++.|+++| +++.|+|++ +...++..|+. |+.. . .|+|.+-.... |.-.+... .+-
T Consensus 213 ~~~l~pGv~elL~~Lk~~G---i~laIvTn~-~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~----~~~~~~~kp~~K 284 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAG---FELGIATGR-PYTETVVPFENLGLLPYFEADFIATASDVLEA----ENMYPQARPLGK 284 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH----HHHSTTSCCCCT
T ss_pred CCCcCcCHHHHHHHHHhCC---CEEEEEeCC-cHHHHHHHHHHcCChHhcCCCEEEeccccccc----ccccccccCCCC
Confidence 5788999999999999999 999999998 57788888877 6632 1 35554321100 00000000 011
Q ss_pred CcHHHHHHHHHHhC--------------CCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 459 DKVQAFNNTLEKYG--------------TDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 459 ~K~~~l~~~~~~~~--------------~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
-+...+...+...+ . .+.++++||||.+|+.+...||+. |.+.
T Consensus 285 P~P~~~~~a~~~lg~~~~~~~~~~~~~~v-~p~e~l~VGDs~~Di~aAk~AG~~~I~V~ 342 (384)
T 1qyi_A 285 PNPFSYIAALYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTL 342 (384)
T ss_dssp TSTHHHHHHHHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred CCHHHHHHHHHHcCCccccccccccccCC-CCcCeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 11233333444333 2 357899999999999999999984 4443
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0033 Score=57.71 Aligned_cols=28 Identities=4% Similarity=0.137 Sum_probs=24.2
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~g 415 (563)
+.+.+.||+.++++.|++ + +++.|+|++
T Consensus 66 ~~~~~~pg~~e~L~~L~~-~---~~~~i~T~~ 93 (180)
T 3bwv_A 66 RNLDVMPHAQEVVKQLNE-H---YDIYIATAA 93 (180)
T ss_dssp GSCCBCTTHHHHHHHHTT-T---SEEEEEECC
T ss_pred ccCCCCcCHHHHHHHHHh-c---CCEEEEeCC
Confidence 357899999999999986 5 899999975
|
| >1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ... | Back alignment and structure |
|---|
Probab=97.10 E-value=0.06 Score=52.17 Aligned_cols=198 Identities=14% Similarity=0.083 Sum_probs=109.7
Q ss_pred CcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCHHHHHHHHH
Q 008499 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-----DDDDAKLSISE 86 (563)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a-----~~~~~~~~l~~ 86 (563)
...+|+++|-......-..+-+.||+..+.+|+++.+.++.||.|=|++....-.+........ -.++.....
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~~p~~~~~~~~~el~R~-- 86 (233)
T 1n45_A 9 MPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRK-- 86 (233)
T ss_dssp -CCSHHHHHHHHTHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTGGGCCHHHHCCH--
T ss_pred CChHHHHHHHHHHHHHHHHHHccHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCchhhhhcCHhhcccH--
Confidence 3457999998876554445557999999999999999999999999999888777666543211 011111110
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 008499 87 LRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (563)
Q Consensus 87 ~~~~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (563)
..+. +++..-.|-+..+..+++|++..|+.++..++.... .+++|+.=+.+.
T Consensus 87 --~~L~------~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~~~~P--------------------~~l~ah~Yv~Ye 138 (233)
T 1n45_A 87 --AALE------QDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEP--------------------ELLVAHAYTRYL 138 (233)
T ss_dssp --HHHH------HHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCG--------------------GGHHHHHHHHHH
T ss_pred --HHHH------HHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCH--------------------HHHHHHHHHHHH
Confidence 1111 122111232333346789999999999997764322 233332111111
Q ss_pred H-----HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhc
Q 008499 167 Y-----AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFC 241 (563)
Q Consensus 167 Y-----~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~ 241 (563)
= ..|++.+.+..+..+.+. =-.+...+...+-..+-....+.||++ .+++++++++.+-=..+-++=.+-++
T Consensus 139 G~~~GGq~i~~~~~~~l~L~~~~~-g~~f~~f~~~~~~~~~k~~fr~~Ld~~--~l~~~e~~~ii~eA~~aF~~n~~i~~ 215 (233)
T 1n45_A 139 GDLSGGQVLKKIAQKALDLPSSGE-GLAFFTFPNIASATKFKQLYRSRMNSL--EMTPAVRQRVIEEAKTAFLLNIQLFE 215 (233)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSCSC-SCGGGCCTTCSCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCC-cceeeccCCcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 223333333222110011 122333444333344555588889986 36888777766655555444444444
Q ss_pred c
Q 008499 242 A 242 (563)
Q Consensus 242 ~ 242 (563)
.
T Consensus 216 e 216 (233)
T 1n45_A 216 E 216 (233)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0013 Score=64.18 Aligned_cols=41 Identities=15% Similarity=0.382 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCcc-EEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-ivi~ 502 (563)
...++.+++..+.+ +.++++|||+ .+|+.++..||+. |.+.
T Consensus 186 p~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~v~ 228 (264)
T 1yv9_A 186 AIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVT 228 (264)
T ss_dssp HHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred HHHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHcCCcEEEEC
Confidence 45888888887763 5789999999 6999999999985 4454
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00038 Score=68.02 Aligned_cols=47 Identities=28% Similarity=0.250 Sum_probs=41.1
Q ss_pred CCCcHHHHHHHHHHhCC-CCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 457 PIDKVQAFNNTLEKYGT-DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~-~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+.+|...++.+++..+. + ...+++||||.||++|+..|++||+++..
T Consensus 177 g~sKg~al~~l~~~~~~~~-~~~viafGD~~NDi~Ml~~ag~~va~gna 224 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDKVFIVGSL 224 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred CCChHHHHHHHHHHhccCC-CceEEEECCCcccHHHHHhCCcEEEeCCC
Confidence 67899999999987654 4 47899999999999999999999999743
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00071 Score=66.80 Aligned_cols=73 Identities=16% Similarity=0.271 Sum_probs=53.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHHHhhCCeeeecC---chhHHhHHh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIPLY---PGLVKKQKE 531 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~~~~gi~~~p~~---~~~~~~~~~ 531 (563)
.+..|...++.+++..+.+ ...+++||||.||++|+..|++|++++. .+.+++.+ .++--+ .|+...++.
T Consensus 188 ~~~~K~~~~~~l~~~l~i~-~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a-----~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 188 PGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIA-----RYATDDNNHEGALNVIQA 261 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHC-----SEECCCGGGTHHHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhC-----CeeCcCCCCChHHHHHHH
Confidence 4668999999999988764 4789999999999999999999999973 45565433 333222 356665555
Q ss_pred hhc
Q 008499 532 YTE 534 (563)
Q Consensus 532 ~~~ 534 (563)
+..
T Consensus 262 ~~~ 264 (271)
T 1rlm_A 262 VLD 264 (271)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00067 Score=67.50 Aligned_cols=72 Identities=19% Similarity=0.358 Sum_probs=53.2
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHHHhhCCeeee---cCchhHHhHHh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIP---LYPGLVKKQKE 531 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~~~~gi~~~p---~~~~~~~~~~~ 531 (563)
.+.+|...++.+++..+.+ ..++++||||.||++|+..|++||+++. .+.+++.+ .++- -..|+...++.
T Consensus 195 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a-----~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 195 KRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVA-----NFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC-----SEECCCTTTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhC-----CEEecCCCcchHHHHHHH
Confidence 4668999999999988763 5789999999999999999999999974 34555433 2332 12466666665
Q ss_pred hh
Q 008499 532 YT 533 (563)
Q Consensus 532 ~~ 533 (563)
+.
T Consensus 269 ~~ 270 (282)
T 1rkq_A 269 YV 270 (282)
T ss_dssp HT
T ss_pred HH
Confidence 53
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00077 Score=65.70 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=45.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRV 510 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~ 510 (563)
.+.+|...++.+++..+.+ ...++++|||.||++|+..+++||+++ +.+.+++.
T Consensus 159 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~ 213 (244)
T 1s2o_A 159 QRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHW 213 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHH
Confidence 3568999999999888764 478999999999999999999999997 44566654
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00074 Score=67.29 Aligned_cols=54 Identities=20% Similarity=0.313 Sum_probs=44.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 510 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~ 510 (563)
.+.+|...++.+++..+.+ ..++++||||.||++|+..|++||+++. .+.+++.
T Consensus 213 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~ 267 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSI 267 (288)
T ss_dssp TTCSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhh
Confidence 4668999999999988764 5789999999999999999999999973 3455543
|
| >1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.031 Score=53.51 Aligned_cols=188 Identities=15% Similarity=0.096 Sum_probs=105.3
Q ss_pred CCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCHHHHHHHH
Q 008499 11 PEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-----DDDDAKLSIS 85 (563)
Q Consensus 11 ~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a-----~~~~~~~~l~ 85 (563)
+...+|+++|-......-...-++|||..+..|.++.+.++.||.|=|++....-.++....... -.+ ....
T Consensus 3 ~~~~~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~~p~~~~~~~~-el~R-- 79 (215)
T 1wzd_A 3 TATAGLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLDP-ALNR-- 79 (215)
T ss_dssp ----CHHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSCG-GGCC--
T ss_pred CccHHHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccCchhhhhccc-hhcc--
Confidence 34457999998776554444556899999999999999999999999999988777776543211 011 1000
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCc--ccccCCChhHHHHHHHHHHHhcCC-CCCCCCCCCCCCchhhhhhhHHHHHHHHH
Q 008499 86 ELRKGVLEELKMHDSFVKEWGTDL--AKMATVNSATVKYTEFLLATASGK-VEGVKGPGKLATPFEKTKVAAYTLGAMSP 162 (563)
Q Consensus 86 ~~~~~i~~E~~~h~~~~~~~gi~~--~~~~~~~p~~~~Y~~fl~~~a~~~-~~~~~~~~~~~~~~~~~~~~a~~l~Al~p 162 (563)
...+..-++ .+|-+. .+..+|+|++..|++++...+... . +..++.++.
T Consensus 80 --~~~l~~DL~-------~l~~~~~w~~~~~~~~a~~~yv~~i~~~~~~~~p-------------------~~~lg~~Yv 131 (215)
T 1wzd_A 80 --AEVLARDLD-------KLNGSSEWRSRITASPAVIDYVNRLEEIRDNVDG-------------------PALVAHHYV 131 (215)
T ss_dssp --HHHHHHHHH-------HHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTCH-------------------HHHHHHHHH
T ss_pred --HHHHHHHHH-------HHcCCcchhhcCCCCHHHHHHHHHHHHHhccCCH-------------------HHHHHHHHH
Confidence 011111122 222222 224678999999999998776432 1 122222222
Q ss_pred HHHH----HHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH
Q 008499 163 CMRL----YAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMK 234 (563)
Q Consensus 163 C~~~----Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~ 234 (563)
-+-+ =..|++.+.+..+. ++ .=-.+...+..++-...-...++.||++ .+++++++++.+-=..+-+
T Consensus 132 ~YeG~~~GGq~i~~~~~~~l~l--~~-~g~~f~~~~~~~~~~~~~~~fr~~Ld~~--~~~~~~~~~ii~eA~~aF~ 202 (215)
T 1wzd_A 132 RYLGDLSGGQVIARMMQRHYGV--DP-EALGFYHFEGIAKLKVYKDEYREKLNNL--ELSDEQREHLLKEATDAFV 202 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC--CG-GGCGGGCCTTCSCHHHHHHHHHHHHHTC--CCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHhcCc--Cc-ccceeeecCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Confidence 2111 02233344433221 11 1122334455334456777889999987 4678777766554444433
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00076 Score=68.02 Aligned_cols=54 Identities=19% Similarity=0.296 Sum_probs=45.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 510 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~ 510 (563)
.+.+|...++.+++..+.+ ...+++||||.||++|+..|++||+++. .+.+++.
T Consensus 221 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~ 275 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSH 275 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHH
T ss_pred CCCCcHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhh
Confidence 4668999999999988764 5789999999999999999999999973 4555543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0013 Score=64.49 Aligned_cols=53 Identities=19% Similarity=0.394 Sum_probs=44.1
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC-hhHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLR 508 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~-~~L~ 508 (563)
..+.+|...++.+++..+.+ ...+++||||.||++|+..|++|++++.. +.++
T Consensus 183 ~~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~ 236 (261)
T 2rbk_A 183 AKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVK 236 (261)
T ss_dssp STTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHH
T ss_pred CCCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCceEEecCccHHHH
Confidence 35678999999999888764 57899999999999999999999999743 3443
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.001 Score=65.62 Aligned_cols=54 Identities=22% Similarity=0.308 Sum_probs=44.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 510 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~ 510 (563)
.+.+|...++.+++..+.+ ...+++||||.||++|+..|++|++++. .+.+++.
T Consensus 187 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~ 241 (268)
T 1nf2_A 187 KNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEA 241 (268)
T ss_dssp TTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHH
T ss_pred CCCChHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhh
Confidence 4568999999999888764 5789999999999999999999999973 3455543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00083 Score=65.28 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=37.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc--CccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA--DIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A--d~givi~~~ 504 (563)
.+.+|...++.+++..+ ++++|||.||++|+..| ++||++++.
T Consensus 157 ~~~~Kg~al~~l~~~~g------via~GD~~ND~~Ml~~a~~g~~vam~Na 201 (239)
T 1u02_A 157 PGVNKGSAIRSVRGERP------AIIAGDDATDEAAFEANDDALTIKVGEG 201 (239)
T ss_dssp TTCCHHHHHHHHHTTSC------EEEEESSHHHHHHHHTTTTSEEEEESSS
T ss_pred CCCCHHHHHHHHHhhCC------eEEEeCCCccHHHHHHhhCCcEEEECCC
Confidence 45689999999997542 99999999999999999 999999855
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00078 Score=65.98 Aligned_cols=47 Identities=23% Similarity=0.368 Sum_probs=40.6
Q ss_pred CCcHHHHHHHHHHhCCCCC--ccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 458 IDKVQAFNNTLEKYGTDRK--NLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~--~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
.+|...++.+++.++.+ . ..+++||||.||+.|++.|++||++++..
T Consensus 175 ~~K~~~l~~l~~~~~i~-~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~ 223 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDP-EEARFAVGLGDSLNDLPLFRAVDLAVYVGRGD 223 (259)
T ss_dssp CCHHHHHHHHHHTCSSH-HHHTSEEEEESSGGGHHHHHTSSEEEECSSSC
T ss_pred CCHHHHHHHHHHHhCCC-CCCceEEEEeCCHHHHHHHHhCCCeEEeCChh
Confidence 47999999999877652 3 67999999999999999999999998543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0011 Score=65.80 Aligned_cols=48 Identities=21% Similarity=0.221 Sum_probs=40.3
Q ss_pred CCCCcHHHHHHHHHHhC-CCCCcc--EEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYG-TDRKNL--SVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~-~~~~~~--viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+.+|...++.+++..+ .+ ... ++++|||.||++|+..|++||+++..
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~-~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~ 236 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLS-GKRPTTLGLGDGPNDAPLLEVMDYAVIVKGL 236 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHH-SSCCEEEEEESSGGGHHHHHTSSEEEECCCC
T ss_pred CCCCHHHHHHHHHHHhhhcc-cccCcEEEECCChhhHHHHHhCCceEEecCC
Confidence 35689999999988766 43 356 99999999999999999999999744
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.011 Score=62.47 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=64.3
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccC---------hHh---hHHHHhC-CCCcceEEeeccEecCccccCcccccC
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWC---------GDL---IRASFSS-GLNALNVHANEFSFKESISTGEIIEKV 454 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws---------~~~---I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~ 454 (563)
+.||+.++|+.|+++| ++++|+|.+ + ..+ +...|+. |+....|+|.+ . +
T Consensus 88 ~~pgv~e~L~~L~~~G---~~l~IvTN~-~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~-----~---------~ 149 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEG---YKLVIFTNQ-MGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATH-----A---------G 149 (416)
T ss_dssp SCTTHHHHHHHHHHTT---CEEEEEEEC-HHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECS-----S---------S
T ss_pred hcccHHHHHHHHHHCC---CeEEEEeCC-ccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECC-----C---------C
Confidence 7899999999999999 999999984 2 123 5666665 66433333332 0 0
Q ss_pred CCCCCcHHHHHHHHHHhC----CCCCccEEEEcCCc-----------------CchHHhhhcCccEE
Q 008499 455 ESPIDKVQAFNNTLEKYG----TDRKNLSVYIGDSV-----------------GDLLCLLEADIGIV 500 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~----~~~~~~viyiGDs~-----------------~Dl~~l~~Ad~giv 500 (563)
..+--+...+...++..+ . ...+++||||+. +|+.+...|++.++
T Consensus 150 ~~~KP~p~~~~~a~~~l~~~~~v-~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~ 215 (416)
T 3zvl_A 150 LNRKPVSGMWDHLQEQANEGIPI-SVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 215 (416)
T ss_dssp TTSTTSSHHHHHHHHHSSTTCCC-CGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE
T ss_pred CCCCCCHHHHHHHHHHhCCCCCC-CHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc
Confidence 111112356666776665 3 357899999997 79999999997644
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.021 Score=56.88 Aligned_cols=97 Identities=8% Similarity=-0.078 Sum_probs=58.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChH---hhHHHHhC---------CCCcceEEeeccEecCccccCcccc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD---LIRASFSS---------GLNALNVHANEFSFKESISTGEIIE 452 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~---~I~~~L~~---------~l~~~~I~aN~l~~~~g~~tG~~~~ 452 (563)
...+.||+.++++.++++| +++.|+|+. ... .+...|+. |+....+++.. + + ..
T Consensus 186 ~~~~~~g~~e~L~~L~~~g---~~~~v~T~k-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~----~--~~ 251 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMG---YQIVVVSGR-ESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQRE----Q----G--DT 251 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTT---CEEEEEECS-CCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECC----T----T--CC
T ss_pred ccCCChHHHHHHHHHHHCC---CeEEEEeCC-CcccchhHHHHHHhcccccccccCCCchheeecc----C----C--CC
Confidence 4578999999999999999 999999986 222 23334432 33211122111 0 0 00
Q ss_pred cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 453 KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 453 ~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
.-+...+...+...+......+++|||+.+|+.+...|++.++
T Consensus 252 -----kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~ 294 (301)
T 1ltq_A 252 -----RKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECW 294 (301)
T ss_dssp -----SCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred -----cHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEE
Confidence 0122333344443332222346899999999999999998544
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0023 Score=62.16 Aligned_cols=52 Identities=13% Similarity=0.155 Sum_probs=39.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcC----CcCchHHhhhcCc-cEEEcCC-hhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSS-SSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-givi~~~-~~L~~~~ 511 (563)
.+.+|...++.+ .+.+ ...++++|| |.||++|+..|+. |+.+++. +.+++.+
T Consensus 185 ~~~~Kg~al~~l---~~i~-~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A 242 (246)
T 2amy_A 185 DGWDKRYCLRHV---ENDG-YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICE 242 (246)
T ss_dssp TTCSGGGGGGGT---TTSC-CSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHH
T ss_pred CCCchHHHHHHH---hCCC-HHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHH
Confidence 355788888887 4443 578999999 9999999999988 9999843 5666655
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.006 Score=59.85 Aligned_cols=52 Identities=13% Similarity=0.186 Sum_probs=40.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcC----CcCchHHhhhcCc-cEEEcCC-hhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSS-SSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-givi~~~-~~L~~~~ 511 (563)
.+.+|...++.+ .+.+ ...++++|| |.||++||..|+. |+.+++. +.+++.+
T Consensus 194 ~~vsKg~al~~l---~gi~-~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a 251 (262)
T 2fue_A 194 EGWDKRYCLDSL---DQDS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCR 251 (262)
T ss_dssp TTCSTTHHHHHH---TTSC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHH
T ss_pred CCCCHHHHHHHH---HCCC-HHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhh
Confidence 356799999998 4543 578999999 9999999999984 9999733 4555544
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.55 E-value=0.038 Score=53.09 Aligned_cols=45 Identities=20% Similarity=0.306 Sum_probs=38.5
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi~ 502 (563)
+..|...++.+++..+.+ ..++++||||. ||+.|+..||++++.-
T Consensus 189 ~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~a~~aG~~~~~v 234 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVE-AHQAVMIGDDIVGDVGGAQRCGMRALQV 234 (271)
T ss_dssp STTCHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred cCCCHHHHHHHHHHhCCC-cceEEEECCCcHHHHHHHHHCCCcEEEE
Confidence 456889999999888864 57899999998 9999999999976653
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.31 E-value=0.014 Score=56.82 Aligned_cols=48 Identities=17% Similarity=0.103 Sum_probs=37.3
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCC----cCchHHhhhcC-ccEEEcCChhHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS----VGDLLCLLEAD-IGIVIGSSSSLR 508 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs----~~Dl~~l~~Ad-~givi~~~~~L~ 508 (563)
.+.+|...++.+++ ....++++||+ .||++|+..|+ +|+.+++.....
T Consensus 184 ~gv~Kg~al~~L~~-----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~ 236 (246)
T 3f9r_A 184 VGWDKTYCLQFVED-----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTI 236 (246)
T ss_dssp TTCSGGGGGGGTTT-----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHH
T ss_pred CCCCHHHHHHHHHc-----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHH
Confidence 35678888888776 24789999994 99999999886 588897554333
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.31 E-value=0.016 Score=55.73 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=36.2
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCcc-EEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-ivi~ 502 (563)
+.-|...++.+++..+.+ +.++++||||. ||+.|+..||+. |.+.
T Consensus 178 ~Kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~i~v~ 224 (259)
T 2ho4_A 178 GKPEKTFFLEALRDADCA-PEEAVMIGDDCRDDVDGAQNIGMLGILVK 224 (259)
T ss_dssp STTSHHHHHHHGGGGTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred cCCCHHHHHHHHHHcCCC-hHHEEEECCCcHHHHHHHHHCCCcEEEEC
Confidence 345778888888888764 57899999998 999999999984 4443
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=93.71 E-value=0.077 Score=49.16 Aligned_cols=91 Identities=9% Similarity=0.130 Sum_probs=58.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccc--cCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESIS--TGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~--tG~~~~~~~~g~~K~ 461 (563)
.+.+|||+.+|++.+.+. ++++|+|++ +..+++.++.. +... .+...+ +.+... .|.+...
T Consensus 53 ~v~~rPg~~efL~~l~~~----~~i~I~T~~-~~~~a~~vl~~ld~~~--~f~~~~-~rd~~~~~k~~~~k~-------- 116 (181)
T 2ght_A 53 YVLKRPHVDEFLQRMGEL----FECVLFTAS-LAKYADPVADLLDKWG--AFRARL-FRESCVFHRGNYVKD-------- 116 (181)
T ss_dssp EEEECTTHHHHHHHHHHH----SEEEEECSS-CHHHHHHHHHHHCTTC--CEEEEE-CGGGSEEETTEEECC--------
T ss_pred EEEeCCCHHHHHHHHHhC----CCEEEEcCC-CHHHHHHHHHHHCCCC--cEEEEE-eccCceecCCcEecc--------
Confidence 468999999999999985 799999999 68899988876 5432 122111 111110 1111110
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
+ +..+. ...++|+||||..|+.+-..+++.
T Consensus 117 --L----~~Lg~-~~~~~vivdDs~~~~~~~~~ngi~ 146 (181)
T 2ght_A 117 --L----SRLGR-DLRRVLILDNSPASYVFHPDNAVP 146 (181)
T ss_dssp --G----GGTCS-CGGGEEEECSCGGGGTTCTTSBCC
T ss_pred --H----HHhCC-CcceEEEEeCCHHHhccCcCCEeE
Confidence 1 11122 247899999999999887777654
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.32 E-value=0.093 Score=49.31 Aligned_cols=90 Identities=12% Similarity=0.182 Sum_probs=58.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccc--cCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESIS--TGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~--tG~~~~~~~~g~~K~ 461 (563)
.+.+|||+.+|++.+.+. ++++|+|++ +..+++.++.. +... .+...+ +.+.+. .|.+..
T Consensus 66 ~v~~RPgv~efL~~l~~~----~~i~I~Tss-~~~~a~~vl~~ld~~~--~f~~~l-~rd~~~~~k~~~lK--------- 128 (195)
T 2hhl_A 66 YVLKRPHVDEFLQRMGQL----FECVLFTAS-LAKYADPVADLLDRWG--VFRARL-FRESCVFHRGNYVK--------- 128 (195)
T ss_dssp EEEECTTHHHHHHHHHHH----SEEEEECSS-CHHHHHHHHHHHCCSS--CEEEEE-CGGGCEEETTEEEC---------
T ss_pred EEEeCcCHHHHHHHHHcC----CeEEEEcCC-CHHHHHHHHHHhCCcc--cEEEEE-EcccceecCCceee---------
Confidence 468899999999999975 799999999 68899998876 5432 121111 111110 011111
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
. ++..+. ...++|+|+||..++.+...+++
T Consensus 129 ----~-L~~Lg~-~~~~~vivDDs~~~~~~~~~ngi 158 (195)
T 2hhl_A 129 ----D-LSRLGR-ELSKVIIVDNSPASYIFHPENAV 158 (195)
T ss_dssp ----C-GGGSSS-CGGGEEEEESCGGGGTTCGGGEE
T ss_pred ----e-HhHhCC-ChhHEEEEECCHHHhhhCccCcc
Confidence 1 111222 24789999999999998877764
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=92.34 E-value=0.085 Score=51.19 Aligned_cols=45 Identities=20% Similarity=0.165 Sum_probs=37.4
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCccEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~givi~ 502 (563)
+..|...++.+++..+.+ +.++++|||+ .||+.|+..||+++++-
T Consensus 194 ~kpk~~~~~~~~~~lgi~-~~e~i~iGD~~~nDi~~a~~aG~~~i~v 239 (271)
T 1vjr_A 194 GKPNPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILV 239 (271)
T ss_dssp STTSTHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEE
T ss_pred CCCCHHHHHHHHHHhCCC-CceEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 445788899999888874 5789999999 59999999999976553
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.31 E-value=0.1 Score=50.58 Aligned_cols=45 Identities=16% Similarity=0.312 Sum_probs=37.2
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCccEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~givi~ 502 (563)
+..|...++.+++..+.+ ..++++|||+ .||+.|+..|+++++..
T Consensus 182 ~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~~~~aG~~~~~v 227 (266)
T 3pdw_A 182 GKPESIIMEQAMRVLGTD-VSETLMVGDNYATDIMAGINAGMDTLLV 227 (266)
T ss_dssp STTSSHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEE
T ss_pred CCCCHHHHHHHHHHcCCC-hhhEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 445668899999888874 5889999999 79999999999965554
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=87.77 E-value=0.53 Score=45.47 Aligned_cols=45 Identities=22% Similarity=0.404 Sum_probs=36.1
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCc-cEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-givi~ 502 (563)
+-.|...++.+++..+.+ +.++++|||+ .+|+.|+..|++ +|.+.
T Consensus 181 ~Kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~ 227 (264)
T 3epr_A 181 GKPNAIIMNKALEILNIP-RNQAVMVGDNYLTDIMAGINNDIDTLLVT 227 (264)
T ss_dssp STTSHHHHHHHHHHHTSC-GGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred CCCCHHHHHHHHHHhCcC-cccEEEECCCcHHHHHHHHHCCCeEEEEC
Confidence 444567788888888764 5789999999 799999999998 45554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=87.29 E-value=0.48 Score=46.98 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=35.4
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCccEEE
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI 501 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~givi 501 (563)
+-.|...++.+++..+.+ +.++++|||+. ||+.|+..||+..++
T Consensus 214 ~KP~~~~~~~~~~~lgi~-~~e~l~vGD~~~~Di~~a~~aG~~~i~ 258 (306)
T 2oyc_A 214 GKPSPYMFECITENFSID-PARTLMVGDRLETDILFGHRCGMTTVL 258 (306)
T ss_dssp STTSTHHHHHHHHHSCCC-GGGEEEEESCTTTHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHHHcCCC-hHHEEEECCCchHHHHHHHHCCCeEEE
Confidence 334567888888888763 57899999996 999999999995444
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.11 E-value=0.62 Score=44.85 Aligned_cols=46 Identities=13% Similarity=0.086 Sum_probs=36.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCc-cEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-givi~ 502 (563)
.+..|...++.+++..+.+ ..++++|||+ .+|+.|+..|++ .+.+.
T Consensus 185 ~~kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~~~~~g~~~~~v~ 232 (268)
T 3qgm_A 185 VGKPSEVIMREALDILGLD-AKDVAVVGDQIDVDVAAGKAIGAETVLVL 232 (268)
T ss_dssp CSTTSHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred cCCCCHHHHHHHHHHhCCC-chhEEEECCCchHHHHHHHHCCCcEEEEC
Confidence 3455678899999888874 5889999999 699999999997 34443
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=86.49 E-value=1.7 Score=41.81 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
+...++..++. . .+.++++|||+. +|+.+...+|+ +|.+.
T Consensus 189 ~~~~~~~~~~~--~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~ 230 (263)
T 1zjj_A 189 NEPMYEVVREM--F-PGEELWMVGDRLDTDIAFAKKFGMKAIMVL 230 (263)
T ss_dssp SHHHHHHHHHH--S-TTCEEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred CHHHHHHHHHh--C-CcccEEEECCChHHHHHHHHHcCCeEEEEC
Confidence 45666666655 2 357899999995 99999999998 45564
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=83.92 E-value=1.5 Score=42.68 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=31.5
Q ss_pred HHHHHHHHHHh----CCCCCccEEEEcCCc-CchHHhhhcCcc-EEEc
Q 008499 461 VQAFNNTLEKY----GTDRKNLSVYIGDSV-GDLLCLLEADIG-IVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~----~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-ivi~ 502 (563)
...+...++.. +. .+.++++|||+. +|+.+...+|+. |.+.
T Consensus 207 p~~~~~a~~~l~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~ 253 (284)
T 2hx1_A 207 SQMFMFAYDMLRQKMEI-SKREILMVGDTLHTDILGGNKFGLDTALVL 253 (284)
T ss_dssp SHHHHHHHHHHHTTSCC-CGGGEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHhhccCC-CcceEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 35667777766 65 357899999995 999999999984 4453
|
| >1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2 | Back alignment and structure |
|---|
Probab=80.79 E-value=35 Score=31.48 Aligned_cols=54 Identities=11% Similarity=0.133 Sum_probs=39.7
Q ss_pred cchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHH
Q 008499 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYE 69 (563)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~ 69 (563)
+++|+.+|-+.....-...-++ |+. ..|.++.+.++.||.|-|++....-..+.
T Consensus 11 ~~~l~~~Lr~~T~~~H~~~e~~-~~~--~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~ 64 (198)
T 1sk7_A 11 QNLRSQRLNLLTNEPHQRLESL-VKS--KEPFASRDNFARFVAAQYLFQHDLEPLYR 64 (198)
T ss_dssp -CCHHHHHHHHTHHHHHHHHHH-HHH--HCTTSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHHHHHHHHH-HHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999987664433333233 764 78999999999999999998887666654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 563 | ||||
| d2a2ma1 | 231 | a.132.1.3 (A:10-240) Hypothetical protein BT3146 { | 9e-42 | |
| d2f2ga1 | 215 | a.132.1.3 (A:5-219) Seed maturation protein-relate | 1e-35 | |
| d2gm8a1 | 211 | a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon | 1e-34 | |
| d1wwma1 | 180 | a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 | 2e-34 | |
| d1udda_ | 215 | a.132.1.3 (A:) Hypothetical transcriptional regula | 3e-33 | |
| d1rtwa_ | 206 | a.132.1.3 (A:) Putative transcriptional activator | 4e-33 | |
| d1to9a_ | 225 | a.132.1.3 (A:) Transcriptional activator TenA {Bac | 4e-32 | |
| d1z72a1 | 217 | a.132.1.3 (A:4-220) Putative transcriptional regul | 2e-31 | |
| d1rcwa_ | 213 | a.132.1.4 (A:) Hypothetical protein CT610 {Chlamyd | 3e-12 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 7e-09 | |
| d1otva_ | 254 | a.132.1.4 (A:) Coenzyme PQQ synthesis protein C, P | 6e-05 |
| >d2a2ma1 a.132.1.3 (A:10-240) Hypothetical protein BT3146 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 231 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical protein BT3146 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 147 bits (373), Expect = 9e-42
Identities = 39/239 (16%), Positives = 83/239 (34%), Gaps = 29/239 (12%)
Query: 7 KSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQ 66
KS P + L +LW +V + + + +A+G L + + QD ++
Sbjct: 20 KSDVPAADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRD 79
Query: 67 AYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFL 126
Y A CA D+ + K + ++++ + W A + Y ++
Sbjct: 80 DYATAATCAQDETLREFFKAKAK---SYDEYNETYHQTWHLREASGLIPGTDIKDYADYE 136
Query: 127 LATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHP 186
A + + Y M PC L+ ++ L N
Sbjct: 137 AYVAG------------------SLASPYMCVVMLPCEYLWPWIANF---LDGYTPTNSL 175
Query: 187 YTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPL 245
Y WI+ A Q ++L++ + ++ ++++ AM E++ F + +
Sbjct: 176 YRFWIEWN--GGTPNGAYQMGNMLEQYRDKIDEDKA---VEIFNTAMNYELKVFTSSTI 229
|
| >d2f2ga1 a.132.1.3 (A:5-219) Seed maturation protein-related At3g16990 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 215 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Seed maturation protein-related At3g16990 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 130 bits (328), Expect = 1e-35
Identities = 42/232 (18%), Positives = 86/232 (37%), Gaps = 28/232 (12%)
Query: 15 GLARRLWIKFKRESVFAMYS--PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAE 72
G+ WI K S++ + F V + G++ L +FR ++ QD+ F++ F
Sbjct: 1 GVIDT-WID-KHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVL 58
Query: 73 ECADDDDAKLS----ISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLA 128
A D + S + + +E++ +W D + A +Y FL
Sbjct: 59 IRACKDSGESSDMEVVLGGIASLNDEIEWFKREGSKWDVDFS-TVVPQRANQEYGRFLED 117
Query: 129 TASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYT 188
S +V+ + A +Y H L + N+ T
Sbjct: 118 LMSSEVK-----------------YPVIMTAFWAIEAVYQESFA--HCLEDGNKTPVELT 158
Query: 189 KWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ ++ F+ +++ ++ + +GE L E + + ++LEV F+
Sbjct: 159 GACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLELEVAFW 210
|
| >d2gm8a1 a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 211 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: TenA homolog PAE0170 species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Score = 127 bits (321), Expect = 1e-34
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 27/209 (12%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL-E 93
PF L +G L +E F++Y+ QD+++L F++A LA A D + EL G +
Sbjct: 20 PFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGTVTG 79
Query: 94 ELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
E+ +++ +KE G L A N V Y +L +T + +
Sbjct: 80 EMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCA------------------LE 121
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD 211
+ A+ PC YA + + L N H Y KW Y S ++ + +LD
Sbjct: 122 GFYQCMAALLPCFWSYAEIAERHGGKLRENPV-HVYKKWASVYLSPEYRGLVERLRAVLD 180
Query: 212 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+G + + + +A E+EF+
Sbjct: 181 S-----SGLSAEELWPYFKEASLYELEFW 204
|
| >d1wwma1 a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 (TT2028) {Thermus thermophilus [TaxId: 274]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical protein TTHA0169 (TT2028) species: Thermus thermophilus [TaxId: 274]
Score = 126 bits (318), Expect = 2e-34
Identities = 28/197 (14%), Positives = 50/197 (25%), Gaps = 35/197 (17%)
Query: 44 NLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVK 103
L E FR ++ QD+ F++A + A + L +EEL
Sbjct: 15 RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAHRAPLVQAL-MATVEELDWLLLQGA 73
Query: 104 EWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPC 163
+ Y L AY +
Sbjct: 74 SPSAPVHP------VRAGYIALLEEMGRLPY-------------------AYRVVFFYFL 108
Query: 164 MRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELD 223
L+ + P+ + ++ + FQA E L L L E +
Sbjct: 109 NGLFLEAWA------HHVPEEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEVV- 161
Query: 224 IIEKLYHQAMKLEVEFF 240
+ ++ E +
Sbjct: 162 --RTYLRRILEAEKATW 176
|
| >d1udda_ a.132.1.3 (A:) Hypothetical transcriptional regulator PH1161 {Pyrococcus horikoshii [TaxId: 53953]} Length = 215 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical transcriptional regulator PH1161 species: Pyrococcus horikoshii [TaxId: 53953]
Score = 124 bits (311), Expect = 3e-33
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 25/208 (12%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEE 94
PF V L SG L LE F+ Y+ QDF++L ++A + A+ I R V E
Sbjct: 24 PFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEYPLMAELIELARDEVTVE 83
Query: 95 LKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKV 152
++ + +KE L Y +F+LATA
Sbjct: 84 VENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAY------------------KGN 125
Query: 153 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDK 212
L A+ PC YA + + L N Y +W Y S + + ++D
Sbjct: 126 IIEGLTALLPCFWSYAEIAEYHKDKLRDNPI-KIYREWGKVYLSNEYLNLVGRLRKIIDS 184
Query: 213 LSVSLTGEELDIIEKLYHQAMKLEVEFF 240
D + +++ K E+ F+
Sbjct: 185 SG----HSGYDRLRRIFITGSKFELAFW 208
|
| >d1rtwa_ a.132.1.3 (A:) Putative transcriptional activator PF1337 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 206 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Putative transcriptional activator PF1337 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 123 bits (310), Expect = 4e-33
Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 24/206 (11%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEE 94
F + +A +K E F ++ D++F+K + L A DD +E + +E
Sbjct: 21 KFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPF-FAESIYYISKE 79
Query: 95 LKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAA 154
L+M + +E G L Y +LL+ AS
Sbjct: 80 LEMFEKKAQELGISLNGEIDWR--AKSYVNYLLSVAS------------------LGSFL 119
Query: 155 YTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLS 214
A+ + Y K + PY ++I+++SS+ F + E +L+ L+
Sbjct: 120 EGFTALYCEEKAYYEAWKWVRE---NLKERSPYQEFINHWSSQEFGEYVKRIEKILNSLA 176
Query: 215 VSLTGEELDIIEKLYHQAMKLEVEFF 240
E + +++ + K E+ F+
Sbjct: 177 EKHGEFEKERAREVFKEVSKFELIFW 202
|
| >d1to9a_ a.132.1.3 (A:) Transcriptional activator TenA {Bacillus subtilis [TaxId: 1423]} Length = 225 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Transcriptional activator TenA species: Bacillus subtilis [TaxId: 1423]
Score = 121 bits (304), Expect = 4e-32
Identities = 42/209 (20%), Positives = 84/209 (40%), Gaps = 24/209 (11%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE- 93
PF + G L ++ F++Y+ QD ++L F++ A D ++ +G E
Sbjct: 21 PFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEA 80
Query: 94 ELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
E+ +H F + + + YT + + +
Sbjct: 81 EMALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSVL------------------SG 122
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD 211
A L A+ PC LY +G++ LL+ + G+ Y KWI Y + F+ + + D
Sbjct: 123 NFAEILAALLPCYWLYYEVGEK---LLHCDPGHPIYQKWIGTYGGDWFRQQVEEQINRFD 179
Query: 212 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+L+ + T E +++ + + E +F+
Sbjct: 180 ELAENSTEEVRAKMKENFVISSYYEYQFW 208
|
| >d1z72a1 a.132.1.3 (A:4-220) Putative transcriptional regulator SP0716 (SPr0628) {Streptococcus pneumoniae [TaxId: 1313]} Length = 217 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Putative transcriptional regulator SP0716 (SPr0628) species: Streptococcus pneumoniae [TaxId: 1313]
Score = 119 bits (298), Expect = 2e-31
Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 27/213 (12%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
A+ F L +G ++ + + Y+ QD+HF AF AD ++KL ++
Sbjct: 25 AINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKLRFAKQLGF 84
Query: 91 VL-EELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPF 147
+ +E KE T++ T + + + + +
Sbjct: 85 LEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVA---------------- 128
Query: 148 EKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNE 207
+ A+ L + LY G + A + +++WI+ + F
Sbjct: 129 --SSDYAHLLVMLVIAEGLYLDWGSK----DLALPEVYIHSEWINLHRGPFFAEWVQFLV 182
Query: 208 DLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
D L+++ + E+L +++ ++QA+ LE+ FF
Sbjct: 183 DELNRVGKNR--EDLTELQQRWNQAVALELAFF 213
|
| >d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia trachomatis [TaxId: 813]} Length = 213 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: PqqC-like domain: Hypothetical protein CT610 species: Chlamydia trachomatis [TaxId: 813]
Score = 64.2 bits (155), Expect = 3e-12
Identities = 23/212 (10%), Positives = 56/212 (26%), Gaps = 27/212 (12%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYEL----AEECADDDDAKLSISELRKG 90
F V + G L E + Y + +KAF + ++ ++ + G
Sbjct: 19 TFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENG 78
Query: 91 VLEELKMHDSFVKEWGTDLAKM--ATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
+ + FV G ++ + A +
Sbjct: 79 YPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWC------------------ 120
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
A + A+ + +E L ++ D + + +++
Sbjct: 121 TGDSLAAGVAALYSYESQIPRIAREKIRGLTE---YFGFSNPEDYAYFTEHEEADVRHAR 177
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
L L ++ D + + + + F
Sbjct: 178 EEKALIEMLLKDDADKVLEASQEVTQSLYGFL 209
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.0 bits (132), Expect = 7e-09
Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 40/235 (17%)
Query: 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQ 321
+L I +DFD+T + + N + + N L++ +
Sbjct: 36 AKLQIITDFDMTLS-----------------RFSYN---GKRCPTCHNIIDNCK-LVTDE 74
Query: 322 YTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK 381
+ Q E + E E E+ + + ++ + +GI +K+
Sbjct: 75 CRRKLLQLKEQYYAIEVDPVLTVE------EKFPYMVE-WYTKSHGLLIEQGIPKAKLKE 127
Query: 382 --AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVH--A 436
A + L++G FF K+ ++ V + S GD++ G+ NV +
Sbjct: 128 IVADSDVMLKEGYENFFGKLQQH---GIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVS 183
Query: 437 NEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY--GTDRKNLSVYIGDSVGDL 489
N F E+ ++ +K + + D N+ + +GDS GDL
Sbjct: 184 NFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNI-ILLGDSQGDL 237
|
| >d1otva_ a.132.1.4 (A:) Coenzyme PQQ synthesis protein C, PqqC {Klebsiella pneumoniae [TaxId: 573]} Length = 254 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: PqqC-like domain: Coenzyme PQQ synthesis protein C, PqqC species: Klebsiella pneumoniae [TaxId: 573]
Score = 42.7 bits (100), Expect = 6e-05
Identities = 19/180 (10%), Positives = 51/180 (28%), Gaps = 18/180 (10%)
Query: 30 FAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89
+ ++ P+ + + +G+ + + ++A F++ D + + +
Sbjct: 22 YHIHHPYHIAMHNGDATRKQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRR---KWVQ 78
Query: 90 GVLEELKMHDSFVK-EWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
+L+ H E L + ++ + +L V+ +
Sbjct: 79 RILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDA----------YL 128
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
A A F + + L + + WI F++ Q
Sbjct: 129 NFARRACWQEAAC-SSLTELFAPQIHQSRL---DSWPQHYPWIKEEGYFYFRSRLSQANR 184
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 563 | |||
| d2a2ma1 | 231 | Hypothetical protein BT3146 {Bacteroides thetaiota | 100.0 | |
| d1to9a_ | 225 | Transcriptional activator TenA {Bacillus subtilis | 100.0 | |
| d1rtwa_ | 206 | Putative transcriptional activator PF1337 {Archaeo | 100.0 | |
| d1udda_ | 215 | Hypothetical transcriptional regulator PH1161 {Pyr | 100.0 | |
| d2f2ga1 | 215 | Seed maturation protein-related At3g16990 {Thale c | 100.0 | |
| d2gm8a1 | 211 | TenA homolog PAE0170 {Archaeon Pyrobaculum aerophi | 100.0 | |
| d1z72a1 | 217 | Putative transcriptional regulator SP0716 (SPr0628 | 100.0 | |
| d1wwma1 | 180 | Hypothetical protein TTHA0169 (TT2028) {Thermus th | 100.0 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.95 | |
| d1rcwa_ | 213 | Hypothetical protein CT610 {Chlamydia trachomatis | 99.91 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.87 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.85 | |
| d1otva_ | 254 | Coenzyme PQQ synthesis protein C, PqqC {Klebsiella | 99.77 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.66 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.31 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 98.86 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 98.83 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.81 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.78 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.76 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 98.76 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.75 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.61 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.56 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 98.53 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 98.5 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 98.49 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 98.45 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.41 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 98.33 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 98.33 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 98.3 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 98.28 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 98.27 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.22 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.11 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.1 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.08 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 98.05 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.99 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 97.8 | |
| d1n45a_ | 214 | Heme oxygenase-1 (HO-1) {Human (Homo sapiens) [Tax | 97.75 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.71 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.7 | |
| d1wzda1 | 207 | Heme oxygenase HmuO {Corynebacterium diphtheriae [ | 97.69 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 97.59 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 97.58 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 97.52 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 97.5 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 97.47 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.45 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 97.43 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.4 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 97.4 | |
| d1we1a_ | 222 | Heme oxygenase-1 (HO-1) {Synechocystis sp. [TaxId: | 97.34 | |
| d1wova1 | 249 | Heme oxygenase 2 {Synechocystis sp. pcc 6803 [TaxI | 97.31 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.17 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.09 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 96.85 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.28 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.21 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.37 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.49 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 91.88 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 84.35 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 82.75 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 82.39 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 82.28 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 80.86 |
| >d2a2ma1 a.132.1.3 (A:10-240) Hypothetical protein BT3146 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical protein BT3146 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=100.00 E-value=2.1e-43 Score=345.95 Aligned_cols=208 Identities=18% Similarity=0.290 Sum_probs=187.8
Q ss_pred CCCCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 008499 6 PKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSIS 85 (563)
Q Consensus 6 ~~~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~ 85 (563)
..+.++++.+++.+||++..+.|.++++||||++|++||||.++|++||+||++||.+|+|+++++++++++.+.+.++.
T Consensus 19 ~~~~~~~~~~~~~~L~~~~~~i~~~~~~h~Fv~~l~~GtL~~e~F~~YL~QDy~YL~~~~r~~a~~~aka~~~~~~~~~~ 98 (231)
T d2a2ma1 19 LKSDVPAADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQDETLREFFK 98 (231)
T ss_dssp CCCSCCCTTSHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999988777665
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 008499 86 ELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCM 164 (563)
Q Consensus 86 ~~~~~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~ 164 (563)
.. +..|+++|+.+++++|++..+..+++|+|++|++||++++. |+. +++++||+||+
T Consensus 99 ~~---~~~e~~l~~~~~~~~gi~~~~~~~~~p~t~aY~~~l~~~a~~~~~-------------------~~~laallpC~ 156 (231)
T d2a2ma1 99 AK---AKSYDEYNETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLAS-------------------PYMCVVMLPCE 156 (231)
T ss_dssp HH---HHHHHHHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHHHHSCT-------------------HHHHHHHHHHH
T ss_pred HH---HHHHHHHHHHHHHHcCCChhhcCCCChHHHHHHHHHHHHHhcCCH-------------------HHHHHHHHHHH
Confidence 44 34588999999999999987778899999999999999996 553 68999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 165 RLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 165 ~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
|+|.+||+++.... .++++|++||+.| ++|.+.+.++++++|+++...+ .++++++|.++|++|++||++|
T Consensus 157 w~Y~~ig~~l~~~~---~~~~~y~~WI~~y--~~f~~~v~~~~~~ld~~~~~~~---~e~~~~iF~~~~~lE~~Fwd~A 227 (231)
T d2a2ma1 157 YLWPWIANFLDGYT---PTNSLYRFWIEWN--GGTPNGAYQMGNMLEQYRDKID---EDKAVEIFNTAMNYELKVFTSS 227 (231)
T ss_dssp HHHHHHHHHHGGGS---CTTSTTHHHHHHH--CSCCHHHHHHHHHHHTTGGGSC---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcC---CCCCchHHHHHhC--hhHHHHHHHHHHHHHHHhcccC---HHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999997643 4789999999999 4599999999999999986554 4578999999999999999999
|
| >d1to9a_ a.132.1.3 (A:) Transcriptional activator TenA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Transcriptional activator TenA species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=3.9e-43 Score=343.00 Aligned_cols=214 Identities=19% Similarity=0.278 Sum_probs=196.9
Q ss_pred HHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHH
Q 008499 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV-LEE 94 (563)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i-~~E 94 (563)
|+++|++++.+.|..+++||||++|++||||.+.|++||+||++||.+|+|+++++++++++++++..+...+..+ .+|
T Consensus 2 Fs~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~yl~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~~~~~~~e 81 (225)
T d1to9a_ 2 FSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAE 81 (225)
T ss_dssp HHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999988887776654 579
Q ss_pred HHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 008499 95 LKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGK 172 (563)
Q Consensus 95 ~~~h~~~~~~~gi~~~--~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~ 172 (563)
+++|+.+++.+|++.+ ...+++|+|++|++||++++..+. ++++++||+||+|+|.++|+
T Consensus 82 ~~~~~~~~~~~gi~~~~~~~~~~~p~~~~y~~~l~~~a~~~~------------------~~~~l~Al~~ce~~Y~~~~~ 143 (225)
T d1to9a_ 82 MALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSVLSGN------------------FAEILAALLPCYWLYYEVGE 143 (225)
T ss_dssp HHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHTTCC------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhhcCcccccchHHHHHHHHHhcCC------------------HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987 367899999999999999996432 47899999999999999999
Q ss_pred HHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccc
Q 008499 173 EFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVP 252 (563)
Q Consensus 173 ~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~~~~~~p 252 (563)
++.... ..+++|++||++|++++|.+.+.++++++|+++..++++++++++++|.++|++|++|||+| +++.+ ||
T Consensus 144 ~~~~~~---~~~~~y~~wi~~~~~~~f~~~~~~~~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fwd~a-y~~~~-w~ 218 (225)
T d1to9a_ 144 KLLHCD---PGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGMA-YRKEG-WS 218 (225)
T ss_dssp HTTTCC---CSSHHHHHHHHHHHSTTTTTHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCC-SS
T ss_pred HHHhcc---cCCchHHHHHHcccCchhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCC-CC
Confidence 887643 36789999999999999999999999999999999999999999999999999999999999 88876 44
|
| >d1rtwa_ a.132.1.3 (A:) Putative transcriptional activator PF1337 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Putative transcriptional activator PF1337 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=4.2e-42 Score=331.05 Aligned_cols=203 Identities=21% Similarity=0.258 Sum_probs=188.1
Q ss_pred HHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 008499 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEEL 95 (563)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~E~ 95 (563)
|+++||+...+.|..+++||||++|++||||++.|++||+||++||.+|+|+++++++++|+.+ ..++......+.+|+
T Consensus 2 Fs~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~yl~QDy~yl~~~~r~~a~~~~~~~~~~-~~~~~~~~~~~~~E~ 80 (206)
T d1rtwa_ 2 FSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDL-LPFFAESIYYISKEL 80 (206)
T ss_dssp HHHHHHHHSHHHHGGGTTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG-HHHHHHHHHHHHHHH
T ss_pred cHHHHHHhHHHHHHHHHCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999864 456666777788899
Q ss_pred HHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 008499 96 KMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEF 174 (563)
Q Consensus 96 ~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~~ 174 (563)
++|.++++++|++.+ ..++|+|++|++||++++. |+ ++++++||+||+|+|.++|+++
T Consensus 81 ~~~~~~~~~~g~~~~--~~~~p~~~~y~~~l~~~a~~~~-------------------~~~~~~al~~~e~~Y~~~~~~~ 139 (206)
T d1rtwa_ 81 EMFEKKAQELGISLN--GEIDWRAKSYVNYLLSVASLGS-------------------FLEGFTALYCEEKAYYEAWKWV 139 (206)
T ss_dssp HHHHHHHHHTTCCSS--SCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccc--cccchhHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999976 4689999999999999996 44 3689999999999999999998
Q ss_pred HhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 175 HALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 175 ~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
.+.. .++++|++||+.|+|++|.+.+..+++++|+++..++++++++++++|+++|++|++|||+|
T Consensus 140 ~~~~---~~~~~y~~wi~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~F~~~~~lE~~Fwd~a 205 (206)
T d1rtwa_ 140 RENL---KERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVFKEVSKFELIFWDIA 205 (206)
T ss_dssp HHHC---SSCCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcc---ccCCcHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8754 36789999999999999999999999999999999999999999999999999999999998
|
| >d1udda_ a.132.1.3 (A:) Hypothetical transcriptional regulator PH1161 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical transcriptional regulator PH1161 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=5.2e-42 Score=332.60 Aligned_cols=207 Identities=23% Similarity=0.319 Sum_probs=189.5
Q ss_pred cchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 008499 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL 92 (563)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~ 92 (563)
.+.|+++||++..+.|..+++||||++|++||||.+.|++||+||++||.+|+|+++.+++++++.+.+.++...+..+.
T Consensus 2 ~~~fs~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~yl~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~~~~~ 81 (215)
T d1udda_ 2 RVMITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEYPLMAELIELARDEVT 81 (215)
T ss_dssp CCCHHHHHHHTTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999988888877777778
Q ss_pred HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 93 EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
.|+++|.++++.+|++.++ ..+|+|+|++|++||++++. |+ ++++++||+||+|+|.+
T Consensus 82 ~e~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~~~~-------------------~~~~l~al~~c~~~Y~~ 142 (215)
T d1udda_ 82 VEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGN-------------------IIEGLTALLPCFWSYAE 142 (215)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHhcccCcchhhHHHHHHHHHHHhCCC-------------------HHHHHHHHHHHHHHHHH
Confidence 8999999999999999873 67899999999999999985 55 36899999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
||+++..... ..++++|++||+.|++++|.+.|..+.+++|++ +++++++++++|.++|++|++|||+|
T Consensus 143 ~~~~~~~~~~-~~~~~~y~~Wi~~y~~~~f~~~v~~l~~~~d~~----~~~~~~~~~~iF~~~~~lE~~Fwd~a 211 (215)
T d1udda_ 143 IAEYHKDKLR-DNPIKIYREWGKVYLSNEYLNLVGRLRKIIDSS----GHSGYDRLRRIFITGSKFELAFWEMA 211 (215)
T ss_dssp HHHHTHHHHT-TCSCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS----CSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcc-cCCCcchHHHHHHcCCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887654 346789999999999999999999999999975 45677889999999999999999998
|
| >d2f2ga1 a.132.1.3 (A:5-219) Seed maturation protein-related At3g16990 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Seed maturation protein-related At3g16990 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=5.8e-42 Score=332.36 Aligned_cols=209 Identities=18% Similarity=0.218 Sum_probs=186.8
Q ss_pred hHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH----HHH
Q 008499 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISEL----RKG 90 (563)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~----~~~ 90 (563)
|++++|+++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++++++++++..+... ...
T Consensus 1 g~~d~l~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~Yl~QDy~yl~~~~r~~a~~~~ka~~~~~~~~~~~~l~~~~~~ 80 (215)
T d2f2ga1 1 GVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEVVLGGIAS 80 (215)
T ss_dssp CHHHHHHHHTHHHHHHHTSCSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999887654433333 334
Q ss_pred HHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 91 VLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 91 i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
..+|+.+|..+++.+|++.+ ..++.|+|++|++||..++. ++. ++++++||+||+|+|.+
T Consensus 81 ~~~e~~~~~~~~~~~~~~~~-~~~~~p~~~~y~~~l~~~~~~~~~------------------~~~~l~al~pc~~~Y~~ 141 (215)
T d2f2ga1 81 LNDEIEWFKREGSKWDVDFS-TVVPQRANQEYGRFLEDLMSSEVK------------------YPVIMTAFWAIEAVYQE 141 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCGG-GCCCCHHHHHHHHHHHHTTSTTSC------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccHH-hcccchHHHHHHHHHHHHHhccCC------------------HHHHHHHHHHHHHHHHH
Confidence 45689999999999999876 46889999999999999874 332 46899999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQP 244 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~ 244 (563)
+|+++.+... +.+++|++||++|++++|.+.|.++++++|++++..+++++++|+++|+++|++|++|||+|+
T Consensus 142 ~~~~~~~~~~--~~~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fwd~Ay 214 (215)
T d2f2ga1 142 SFAHCLEDGN--KTPVELTGACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLELEVAFWEMSR 214 (215)
T ss_dssp HTTTHHHHHH--TSSSCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccC--cCcchHHHHHHHhCCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9998876532 357899999999999999999999999999999999999999999999999999999999994
|
| >d2gm8a1 a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: TenA homolog PAE0170 species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=100.00 E-value=8.5e-41 Score=322.97 Aligned_cols=203 Identities=26% Similarity=0.376 Sum_probs=184.6
Q ss_pred HHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHH
Q 008499 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV-LEE 94 (563)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i-~~E 94 (563)
+|..||++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++++++.+++..+...+... .+|
T Consensus 1 ~t~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~yl~QD~~yl~~~~r~la~~~~~~~~~~~~~~~~~~~~~~~~~E 80 (211)
T d2gm8a1 1 VTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGTVTGE 80 (211)
T ss_dssp HHHHHHHHTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTH
T ss_pred ChHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999999999999999999999999988888776654 569
Q ss_pred HHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 008499 95 LKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLG 171 (563)
Q Consensus 95 ~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig 171 (563)
+++|+.+++.+|++.++ ..+++|+|.+|++||++++. ++ ++++++||+||+|+|.+||
T Consensus 81 ~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~~~~-------------------~~~~l~al~~c~~~Y~~~~ 141 (211)
T d2gm8a1 81 MANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEG-------------------FYQCMAALLPCFWSYAEIA 141 (211)
T ss_dssp HHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCHHHHhhcCCchhhhhHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999863 67899999999999999985 44 3689999999999999999
Q ss_pred HHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 172 KEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 172 ~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
+++.+... ..++++|++||+.|++++|.+.|.++++++|+. +++++++.++|+++|++|++|||+|
T Consensus 142 ~~~~~~~~-~~~~~~y~~wi~~~~~~~f~~~v~~l~~~ld~~-----~~~~~~~~~~f~~~~~lE~~Fwd~a 207 (211)
T d2gm8a1 142 ERHGGKLR-ENPVHVYKKWASVYLSPEYRGLVERLRAVLDSS-----GLSAEELWPYFKEASLYELEFWQAA 207 (211)
T ss_dssp HHHGGGGG-GCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcc-ccCCCcHHHHHHHhCCHHHHHHHHHHHHHHhcC-----hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876543 346789999999999999999999999999984 3466789999999999999999998
|
| >d1z72a1 a.132.1.3 (A:4-220) Putative transcriptional regulator SP0716 (SPr0628) {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Putative transcriptional regulator SP0716 (SPr0628) species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=2.1e-40 Score=321.67 Aligned_cols=207 Identities=20% Similarity=0.228 Sum_probs=188.9
Q ss_pred CcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008499 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (563)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (563)
.++.++.+||.+.++.|..+++||||++|++||||.+.|++||+||++||.+|+|+++.+++++|+.+++..+...+..+
T Consensus 6 ~~~~~~~~l~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~~~~ka~~~~~~~~~~~~~~~~ 85 (217)
T d1z72a1 6 QPGLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKLRFAKQLGFL 85 (217)
T ss_dssp CCHHHHHHHHHTTHHHHHHHHTCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHhCHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999988888877765
Q ss_pred -HHHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 008499 92 -LEELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY 167 (563)
Q Consensus 92 -~~E~~~h~~~~~~~gi~~~--~~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y 167 (563)
.+|+++|+++++++|++.+ ...+|+|+|++|++||++++. ++ ++++++||+||+|+|
T Consensus 86 ~~~e~~~~~~~~~~~gi~~~~~~~~~~~p~t~~y~~~l~~~a~~~~-------------------~~~~l~al~~~~~~Y 146 (217)
T d1z72a1 86 EADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSD-------------------YAHLLVMLVIAEGLY 146 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChhhccccCCChHhhHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHH
Confidence 4699999999999999976 367899999999999999995 54 368999999999999
Q ss_pred HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 168 AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 168 ~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
.++|+++... +.+++|.+||+.|++++|.+.|.++++++|+++. +++++++|.++|+++|++|++|||+|
T Consensus 147 ~~~~~~~~~~----~~~~~y~~wi~~~~~~~f~~~v~~l~~~ld~~~~--~~~~~~~~~~~f~~~~~lE~~Fwd~a 216 (217)
T d1z72a1 147 LDWGSKDLAL----PEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGK--NREDLTELQQRWNQAVALELAFFDIG 216 (217)
T ss_dssp HHHHTCSSCC----CSSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHhcC----CCCchHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999876542 3578999999999999999999999999999974 56789999999999999999999998
|
| >d1wwma1 a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 (TT2028) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical protein TTHA0169 (TT2028) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-36 Score=286.20 Aligned_cols=170 Identities=18% Similarity=0.137 Sum_probs=149.4
Q ss_pred hcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Q 008499 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAK 111 (563)
Q Consensus 32 ~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~E~~~h~~~~~~~gi~~~~ 111 (563)
..||| +||.++|++||+||++||.+|+|+++++++++|+. ++..+...+.++.+|+.+|+..++++|
T Consensus 10 ~~~pf-------~L~~e~F~~YL~QD~~yl~~~~r~~a~~~~ka~~~-~~~~~~~~~~~~~~E~~~~~~~~~~~~----- 76 (180)
T d1wwma1 10 KALPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQA-HRAPLVQALMATVEELDWLLLQGASPS----- 76 (180)
T ss_dssp HHCCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHTTTCCSS-----
T ss_pred HhCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 45888 99999999999999999999999999999999974 555666666678889999987766665
Q ss_pred ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccccccc
Q 008499 112 MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWI 191 (563)
Q Consensus 112 ~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~~~~~~~~~~~~~~y~~Wi 191 (563)
++++|+|++|++||.+++.++ ++++++||+||+|+|.+||+++.+ .+|||++||
T Consensus 77 -~~~~p~~~~Y~~~l~~~a~~~-------------------~~~~l~al~pc~~~Y~~~~~~~~~------~~~~y~eWI 130 (180)
T d1wwma1 77 -APVHPVRAGYIALLEEMGRLP-------------------YAYRVVFFYFLNGLFLEAWAHHVP------EEGPWAELS 130 (180)
T ss_dssp -SCCCHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHHHHHSC------SSSHHHHHH
T ss_pred -CCCChHHHHHHHHHHHHhccC-------------------hHHHHHHHHHHHHHHHHHHHHhcc------cCchHHHHH
Confidence 467899999999999988654 368999999999999999998753 568999999
Q ss_pred cccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 192 DNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 192 ~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
++|+||+|.+.|.++++++|+.+...++++ ++++|.++|++|++||+|+
T Consensus 131 ~~y~~~~F~~~v~~l~~~vd~~~~~~~~~~---~~~~F~~~~~lE~~FW~m~ 179 (180)
T d1wwma1 131 QHWFAPEFQAVLYDLEVLARGLWEDLDPEV---VRTYLRRILEAEKATWSLL 179 (180)
T ss_dssp HHHSCTTHHHHHHHHHHHHHHHHTTSCHHH---HHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhhcCCHHH---HHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999998887765 5577999999999999997
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=2.6e-28 Score=245.06 Aligned_cols=228 Identities=17% Similarity=0.250 Sum_probs=175.6
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+++++||+|||+|||+.|+.+.++. ++|.+......+++.|++...++.++|.|.+.++
T Consensus 35 ~~klqVisDFD~Tit~~~~~~~~~~---------------------s~~~i~~~~~~~~e~~~~~~~~l~~~y~p~E~d~ 93 (291)
T d2bdua1 35 AAKLQIITDFDMTLSRFSYNGKRCP---------------------TCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDP 93 (291)
T ss_dssp GGGEEEEECCTTTTBCSEETTEECC---------------------CHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHTCS
T ss_pred hhhEEEEecCCCcccccccCCcccc---------------------hhHHHHhhCCCCCHHHHHHHHHHHhhhcccccCC
Confidence 4899999999999999886532111 1222333334456778888888999999999999
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccCh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~ 418 (563)
.++.+++.++ |.|||.+++..+.+. |++++++.+.+. ++.||||+.+|++.|+++| +|++|||+|| .
T Consensus 94 ~~s~~ek~~~---m~ew~~~~~~ll~~~----~l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~---i~~~IvSgG~-~ 162 (291)
T d2bdua1 94 VLTVEEKFPY---MVEWYTKSHGLLIEQ----GIPKAKLKEIVADSDVMLKEGYENFFGKLQQHG---IPVFIFSAGI-G 162 (291)
T ss_dssp SSCHHHHHHH---HHHHHHHHHHHHHHH----CCBGGGHHHHHHHSCCCBCBTHHHHHHHHHHHT---CCEEEEEEEE-H
T ss_pred CCCHHHHHHH---HHHHHHHHHHHHHHc----CCCHHHHHHHHHhcCCCcccCHHHHHHHHHHcC---CeEEEEcCCh-H
Confidence 9999999886 559999999999774 679999999876 5899999999999999999 9999999998 8
Q ss_pred HhhHHHHhC-CC--CcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhC-CCCCccEEEEcCCcCchHHhhh
Q 008499 419 DLIRASFSS-GL--NALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYG-TDRKNLSVYIGDSVGDLLCLLE 494 (563)
Q Consensus 419 ~~I~~~L~~-~l--~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~-~~~~~~viyiGDs~~Dl~~l~~ 494 (563)
++|+.++++ ++ ++++|+||.+.|+++..+|.+.+++....+|...+.+...... ...+.++|++|||.||+.|+..
T Consensus 163 ~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g 242 (291)
T d2bdua1 163 DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADG 242 (291)
T ss_dssp HHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTT
T ss_pred HHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhC
Confidence 999999988 54 5679999999999887888888877777788765544322111 1125689999999999999975
Q ss_pred c---Cc--cEEEc-CC--hhHHHHHHhhCCeeee
Q 008499 495 A---DI--GIVIG-SS--SSLRRVGSQFGVTFIP 520 (563)
Q Consensus 495 A---d~--givi~-~~--~~L~~~~~~~gi~~~p 520 (563)
+ +. +|.|- .+ ..|..|++.+.|-++-
T Consensus 243 ~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~ 276 (291)
T d2bdua1 243 VANVEHILKIGYLNDRVDELLEKYMDSYDIVLVK 276 (291)
T ss_dssp CSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEET
T ss_pred CccccceeeeehhHhhHHHHHHHHHhcCCEEEec
Confidence 3 22 33332 22 4688888877765553
|
| >d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia trachomatis [TaxId: 813]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: PqqC-like domain: Hypothetical protein CT610 species: Chlamydia trachomatis [TaxId: 813]
Probab=99.91 E-value=9.3e-24 Score=201.76 Aligned_cols=201 Identities=13% Similarity=0.133 Sum_probs=152.0
Q ss_pred HHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH---
Q 008499 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL--- 92 (563)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~--- 92 (563)
|-++|.+.. ......+|||+++|++|+||.+.|++|+.|||+|+..|.|.++.+++++++++.+..+...+....
T Consensus 2 f~~~l~~~~--~~~~~~~HPf~~~l~~G~l~~e~~~~~~~Q~y~~v~~f~r~la~~~~~~~~~~~~~~l~~~l~~e~~~~ 79 (213)
T d1rcwa_ 2 FLDQLDLII--QNKHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENGY 79 (213)
T ss_dssp HHHHHHHHH--HHTCGGGSHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHH--hhCccccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhccc
Confidence 455665533 223457899999999999999999999999999999999999999999999998887766654322
Q ss_pred -HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 93 -EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 93 -~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
.+..+|..+++.+|++.++ ..++.|+|.+|++||+.++..+. +..++++++||+|.|..
T Consensus 80 ~~h~~l~~~~~~~~g~~~~~~~~~~~~p~t~a~~~~~~~~~~~~~------------------~~~~~a~~~~~e~~~~~ 141 (213)
T d1rcwa_ 80 PNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWCTGDS------------------LAAGVAALYSYESQIPR 141 (213)
T ss_dssp SCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHTSSC------------------HHHHHHHHHHHHTTHHH
T ss_pred cchHHHHHHHHHHcCCCHHHHhhhhhhhHHHHHHHHHHHHHcccc------------------HHHHHHHHHHHHHHHHH
Confidence 2578999999999999863 67899999999999999996433 35789999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHH----HHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQ----ASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~----~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
+++.+.+.... ..+.+...++..| ..+. +....+.++++.+ ++++++++.++|.+++++|+.|||..
T Consensus 142 ~~~~~~~~~~~-~~~~~~~~~~~~~--~~h~~~D~~H~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~f~D~~ 212 (213)
T d1rcwa_ 142 IAREKIRGLTE-YFGFSNPEDYAYF--TEHEEADVRHAREEKALIEML----LKDDADKVLEASQEVTQSLYGFLDSF 212 (213)
T ss_dssp HHHHHHHHHHH-HSCCCSGGGGHHH--HHHHHHHHHHHHHHHHHHHHH----CSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-hCCCCcHHHhHHH--HHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99887653210 0111112222222 1122 2334455555544 56678999999999999999999975
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2.1e-22 Score=193.95 Aligned_cols=196 Identities=17% Similarity=0.135 Sum_probs=141.4
Q ss_pred CeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccCC
Q 008499 263 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENF 342 (563)
Q Consensus 263 ~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~~ 342 (563)
...|+|||||||++.|+...|++... ..+++..++..++.+.
T Consensus 10 ~~aV~FD~DGTLi~~e~~~~l~~~~g----------------------~~~~~~~~~~~~~~g~---------------- 51 (217)
T d1nnla_ 10 ADAVCFDVDSTVIREEGIDELAKICG----------------------VEDAVSEMTRRAMGGA---------------- 51 (217)
T ss_dssp CSEEEEETBTTTBSSCHHHHHHHHTT----------------------CTTTC---------------------------
T ss_pred CCEEEEcCccccCCccHHHHHHHHcC----------------------ChHHHHHHHHHHHcCC----------------
Confidence 34688999999999999888876441 2233444444443321
Q ss_pred CHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc-cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhh
Q 008499 343 NYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI 421 (563)
Q Consensus 343 ~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I 421 (563)
.+|.+.+. .++ .+++|...+.++...+ .+.++||+.++++.|+++| ++++|||+++ ..++
T Consensus 52 -----~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~l~pg~~~~i~~lk~~G---~~~~ivS~~~-~~~v 112 (217)
T d1nnla_ 52 -----VPFKAALT-------ERL---ALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERN---VQVFLISGGF-RSIV 112 (217)
T ss_dssp ------CHHHHHH-------HHH---HHHCCCHHHHHHHHHHSCCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHH
T ss_pred -----CCHHHHHH-------HHH---HhcccchHHHHHHHHhhccccCHHHHHHHHHHHhCC---CEEEEECCCc-hHHH
Confidence 22222221 122 4567766555555554 4779999999999999999 9999999996 8899
Q ss_pred HHHHhC-CCCcceEEeeccEec-CccccCccc-ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 422 RASFSS-GLNALNVHANEFSFK-ESISTGEII-EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 422 ~~~L~~-~l~~~~I~aN~l~~~-~g~~tG~~~-~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
+.+++. |++..+++||++.++ +|.+||... .++..+.+|...++.+..+.+ ..++++||||.||++|++.||+|
T Consensus 113 ~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~~~~---~~~~~~vGDs~~Di~~~~~ag~~ 189 (217)
T d1nnla_ 113 EHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFH---FKKIIMIGDGATDMEACPPADAF 189 (217)
T ss_dssp HHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHC---CSCEEEEESSHHHHTTTTTSSEE
T ss_pred HHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHHHhccC---ccccEEEEeCHhhHHHHHhCCce
Confidence 998887 887778999999987 577887544 345667889999998877654 36799999999999999999999
Q ss_pred EEEcCChhHHHHHHhhCCee
Q 008499 499 IVIGSSSSLRRVGSQFGVTF 518 (563)
Q Consensus 499 ivi~~~~~L~~~~~~~gi~~ 518 (563)
|++++++.+..++++..|.+
T Consensus 190 va~~~~~~~~~~~~~ad~~i 209 (217)
T d1nnla_ 190 IGFGGNVIRQQVKDNAKWYI 209 (217)
T ss_dssp EEECSSCCCHHHHHHCSEEE
T ss_pred EEECCCHHHHHHHHhCCCEe
Confidence 99998877777776666544
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=1.9e-21 Score=186.71 Aligned_cols=204 Identities=17% Similarity=0.144 Sum_probs=140.6
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
+|.+|+||||||||..|++..+++.. ..+.|..+...|..+.
T Consensus 3 ~k~lVifD~DGTL~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~~~--------------- 44 (226)
T d2feaa1 3 RKPFIICDFDGTITMNDNIINIMKTF-----------------------APPEWMALKDGVLSKT--------------- 44 (226)
T ss_dssp CCEEEEECCTTTTBSSCHHHHHHHHH-----------------------SCTHHHHHHHHHHTTS---------------
T ss_pred CCeEEEEeCCCCCcCchHHHHHHHHH-----------------------CcchHHHHHHHHHcCc---------------
Confidence 67899999999999999998888754 2245666655443221
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHH-hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~-~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
.++... +. .. ...+.+...+.+... .+.++++||+.++++.++++| ++++|+|+| ...+
T Consensus 45 ~~~~~~------~~--------~~--~~~~~~~~~~~~~~~~~~~~~l~pg~~~~l~~L~~~g---~~~~ivS~~-~~~~ 104 (226)
T d2feaa1 45 LSIKEG------VG--------RM--FGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHE---IPFYVISGG-MDFF 104 (226)
T ss_dssp SCHHHH------HH--------HH--HTTSBGGGHHHHHHHHHHHCCBCTTHHHHHHHHHHHT---CCEEEEEEE-EHHH
T ss_pred ccHHHH------HH--------HH--HHHhccccHHHHHHHHHhccchhHHHHHHHHHHHhcc---cccccCCcc-hhhh
Confidence 222211 11 11 123344445555443 457899999999999999999 999999988 5899
Q ss_pred hHHHHhC-CCCcceEEeeccEecCccccCcc--cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 421 IRASFSS-GLNALNVHANEFSFKESISTGEI--IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 421 I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~--~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
++.+|++ ++ ...++||++.++++..++.+ ......+..|...+..+++.++. .+.+++|||||.||++|++.||+
T Consensus 105 i~~~l~~l~~-~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Dl~~a~~A~~ 182 (226)
T d2feaa1 105 VYPLLEGIVE-KDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVEAAKLSDL 182 (226)
T ss_dssp HHHHHTTTSC-GGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGGHHHHHTCSE
T ss_pred HHHHHHHcCC-ccceeeeeEEEeCCcceeccccccccccccCCHHHHHHHHHHhcC-CCceEEEEeCchhhHHHHHHCCE
Confidence 9999987 44 46899999999875433222 22222333343334444444444 35789999999999999999997
Q ss_pred cEEEcCChhHHHHHHhhCCeeeecCc--hhHHh
Q 008499 498 GIVIGSSSSLRRVGSQFGVTFIPLYP--GLVKK 528 (563)
Q Consensus 498 givi~~~~~L~~~~~~~gi~~~p~~~--~~~~~ 528 (563)
++++ ..+.++|++.++++.|+.+ +++..
T Consensus 183 ~~a~---~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 183 CFAR---DYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp EEEC---HHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred EEEe---cchHHHHHHcCCCeeecCCHHHHHHH
Confidence 6554 4589999999999999875 44433
|
| >d1otva_ a.132.1.4 (A:) Coenzyme PQQ synthesis protein C, PqqC {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: PqqC-like domain: Coenzyme PQQ synthesis protein C, PqqC species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.77 E-value=4.7e-19 Score=174.31 Aligned_cols=214 Identities=9% Similarity=0.036 Sum_probs=156.1
Q ss_pred CcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008499 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (563)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (563)
....|.++|-.+-. . .-.+|||++++.+|+|+.+.|+.|+.|||+|+..|.|.++.++++++|++.+..+...+..-
T Consensus 7 ~~~~F~~~L~~~~~-~--~h~~HPF~~~l~~G~l~~e~l~~y~~Q~y~y~~~f~r~laai~a~~~d~~~r~~ll~nl~ee 83 (254)
T d1otva_ 7 SPQAFEEALRAKGD-F--YHIHHPYHIAMHNGDATRKQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRRKWVQRILDH 83 (254)
T ss_dssp CHHHHHHHHHHGGG-G--SGGGSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-h--hcCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 34567888755431 1 12679999999999999999999999999999999999999999999999887765443221
Q ss_pred HH-H-----HHHHHHHHHHhCCCccc---ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHH
Q 008499 92 LE-E-----LKMHDSFVKEWGTDLAK---MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP 162 (563)
Q Consensus 92 ~~-E-----~~~h~~~~~~~gi~~~~---~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~p 162 (563)
.. + .+++.++++.+|++.++ ..++.|+|+.|++++...+..+. +..++++++
T Consensus 84 ~g~~~~~~H~~l~~~f~~~lGl~~e~v~~~~~~lp~t~~~v~~~~~~~~~~~------------------~~~~~a~~~- 144 (254)
T d1otva_ 84 DGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRAC------------------WQEAACSSL- 144 (254)
T ss_dssp HCSTTCCCHHHHHHHHHHHTTCCHHHHHTCTTCCHHHHHHHHHHHHHHHHSC------------------HHHHHHGGG-
T ss_pred hcccCCccHHHHHHHHHHHhCCCHHHHhccccCCHHHHHHHHHHHHHhcccc------------------HHHHHHHHH-
Confidence 10 1 67899999999999873 34568999999999999886332 123333332
Q ss_pred HHHHHHHHHHHHHhhccCCCCcccccccccccCChhHH-------HHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Q 008499 163 CMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQ-------ASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 235 (563)
Q Consensus 163 C~~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~-------~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~l 235 (563)
+++.+..|.. .. ...-..|..|++.++-+.|. ..+....+++++++ .++++++++.++++.+|++
T Consensus 145 ~E~~~p~i~~---~~---~~gl~~~y~~i~~~~l~~F~~h~~~d~~h~e~~~~l~~~~~--~t~e~q~~~l~a~~~s~~~ 216 (254)
T d1otva_ 145 TELFAPQIHQ---SR---LDSWPQHYPWIKEEGYFYFRSRLSQANRDVEHGLALAKAYC--DSAEKQNRMLEILQFKLDI 216 (254)
T ss_dssp GGGGCCSTTC---CS---SCSSTTTCTTSCHHHHHHHHHHHHTCCSCTTHHHHHHHHHC--CSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHH---HH---HHHHHHhcCccCHHHHHHHHHHHHHhHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH
Confidence 3333333221 11 12335688899988887774 45566889999987 3789999999999999999
Q ss_pred HHHhhcc---CCCCCCcccccccCC
Q 008499 236 EVEFFCA---QPLAQPTVVPLIKGH 257 (563)
Q Consensus 236 E~~Fw~~---a~~~~~~~~p~~~~~ 257 (563)
+|.|||+ + +..+ .+|.-.+.
T Consensus 217 lw~flD~~~~a-Y~~~-~~p~~~~~ 239 (254)
T d1otva_ 217 LWSMLDAMTMA-YALQ-RPPYHTVT 239 (254)
T ss_dssp HHHHHHHHHHH-HTSS-CCTTTTTC
T ss_pred HHHHHHHHHHH-HcCC-CCCCCcCC
Confidence 9999996 4 3333 35665543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.66 E-value=7.2e-16 Score=144.02 Aligned_cols=137 Identities=19% Similarity=0.228 Sum_probs=108.4
Q ss_pred hccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccC
Q 008499 369 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTG 448 (563)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG 448 (563)
..+.+.....+........+.+|..++++.+..+| ..++++|+++ ..++...... .....++++.+..+++..++
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~---~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 131 (210)
T d1j97a_ 57 SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRG---YVVAVVSGGF-DIAVNKIKEK-LGLDYAFANRLIVKDGKLTG 131 (210)
T ss_dssp HTTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHH-HTCSEEEEEEEEEETTEEEE
T ss_pred HHHhhhHHHHHHHHhhhhhhhhhHHHHHHHHHHcC---CEEEeecccc-cccccchhhc-cchhhhhhhhhccccccccc
Confidence 34567777777777788999999999999999998 8999999986 6666666554 22356788888777766665
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHH
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVG 511 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~ 511 (563)
........+..|...+..+....+. .+..+++||||.||++|+..||+||++++.+.|++.|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~A 193 (210)
T d1j97a_ 132 DVEGEVLKENAKGEILEKIAKIEGI-NLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKA 193 (210)
T ss_dssp EEECSSCSTTHHHHHHHHHHHHHTC-CGGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTC
T ss_pred cccccccccccccchhhhHHHHhcc-cccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhC
Confidence 5555566777888888888877765 3578999999999999999999999998888777544
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.31 E-value=9e-12 Score=115.33 Aligned_cols=123 Identities=19% Similarity=0.174 Sum_probs=86.4
Q ss_pred CCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccc
Q 008499 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIE 452 (563)
Q Consensus 373 Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~ 452 (563)
+....++......+...++...++..++ ++ ...+++|+++ ...+...... +...+.++|.+.+.++...+....
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~s~~~-~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~ 128 (206)
T d1rkua_ 55 GLKLGDIQEVIATLKPLEGAVEFVDWLR-ER---FQVVILSDTF-YEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQL 128 (206)
T ss_dssp TCCHHHHHHHHTTCCCCTTHHHHHHHHH-TT---SEEEEEEEEE-HHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEEC
T ss_pred CCceehhhhhhhhccccchHHHHHHHhh-cC---ceEEEeccCc-hHHHHHHHHH-hCCchhhcceeeeecccccccccc
Confidence 5577777777778899999999988876 45 7889999996 5555554443 334578999998876544332221
Q ss_pred cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHH
Q 008499 453 KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 508 (563)
Q Consensus 453 ~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~ 508 (563)
..+..+...++.+.. ...++++||||.||++|++.||+||+|++...++
T Consensus 129 --~~~~~~~~~~~~~~i-----~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~ 177 (206)
T d1rkua_ 129 --RQKDPKRQSVIAFKS-----LYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVI 177 (206)
T ss_dssp --CSSSHHHHHHHHHHH-----TTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHH
T ss_pred --cchhhHHHHHHHhcc-----cccceEEecCCccCHHHHHhCCccEEECCCHHHH
Confidence 122223333333222 2478999999999999999999999998877666
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.86 E-value=1.3e-08 Score=94.24 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=70.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| +++.|+|.+. . .+..+|+. |+.. ..|++.+- .....-|.
T Consensus 80 ~~~~~pgv~~~L~~L~~~g---~~~~v~Sn~~-~-~~~~~l~~~gl~~~f~~i~~s~~--------------~~~~Kp~~ 140 (204)
T d2go7a1 80 QVVLMPGAREVLAWADESG---IQQFIYTHKG-N-NAFTILKDLGVESYFTEILTSQS--------------GFVRKPSP 140 (204)
T ss_dssp GCEECTTHHHHHHHHHHTT---CEEEEECSSC-T-HHHHHHHHHTCGGGEEEEECGGG--------------CCCCTTSS
T ss_pred cCcccchHHhhhhcccccc---cchhhhcccc-h-hhhhhhhhccccccccccccccc--------------ccccchhH
Confidence 5788999999999999999 9999999863 4 34567776 6643 22332220 11122355
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
..++..++..+. .+..+++|||+.+|+.+...+|+..+
T Consensus 141 ~~~~~~~~~~~~-~p~~~l~VgD~~~Di~~A~~~G~~~i 178 (204)
T d2go7a1 141 EAATYLLDKYQL-NSDNTYYIGDRTLDVEFAQNSGIQSI 178 (204)
T ss_dssp HHHHHHHHHHTC-CGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhCC-CCceEEEEeCCHHHHHHHHHcCCeEE
Confidence 777888888776 35899999999999999999998433
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.83 E-value=1.4e-07 Score=88.70 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=68.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.+++++++ ++ ++++|+|.+ ....++..++. |+.. ..|++.. . .| .+--+.
T Consensus 98 ~~~~~p~~~~~L~~l~-~~---~~i~i~Sn~-~~~~~~~~l~~~gl~~~fd~i~~s~-----~--~~-------~~KP~~ 158 (230)
T d1x42a1 98 YGELYPEVVEVLKSLK-GK---YHVGMITDS-DTEYLMAHLDALGIKDLFDSITTSE-----E--AG-------FFKPHP 158 (230)
T ss_dssp HCCBCTTHHHHHHHHB-TT---BEEEEEESS-CHHHHHHHHHHHTCGGGCSEEEEHH-----H--HT-------BCTTSH
T ss_pred hCcccccHHHHHHHhh-cc---Cceeeeecc-ccccchhhhcccccccccccccccc-----c--cc-------ccchhh
Confidence 5788999999999996 46 899999998 57788888877 7642 2333221 0 01 111134
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~gi 499 (563)
..++..+++.+.. +.++++|||+ .+|+.+...+|+..
T Consensus 159 ~~~~~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~ 196 (230)
T d1x42a1 159 RIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTS 196 (230)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEE
T ss_pred HHHHHHHhhhccc-ccccceeecCcHhHHHHHHHcCCEE
Confidence 6777788877764 5789999998 58999999999843
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.81 E-value=9.2e-09 Score=96.07 Aligned_cols=97 Identities=15% Similarity=0.100 Sum_probs=71.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.|+++| +++.|+|++ ....++..++. |+.. ..|++.+- .| .+--+.
T Consensus 86 ~~~~~pg~~~~l~~L~~~g---~~~~i~T~~-~~~~~~~~l~~~~l~~~F~~i~~~~~-------~~-------~~Kp~~ 147 (218)
T d1te2a_ 86 TRPLLPGVREAVALCKEQG---LLVGLASAS-PLHMLEKVLTMFDLRDSFDALASAEK-------LP-------YSKPHP 147 (218)
T ss_dssp HCCBCTTHHHHHHHHHHTT---CEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEECTT-------SS-------CCTTST
T ss_pred cccccchHHHHHHHhhhcc---ccccccccc-cccccccccccccccccccccccccc-------cc-------cchhhH
Confidence 4678899999999999999 999999998 57788888876 6642 23333320 01 111234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
..+...++..+.+ +.++++||||.+|+.+.+.+|+..+
T Consensus 148 ~~~~~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i 185 (218)
T d1te2a_ 148 QVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSI 185 (218)
T ss_dssp HHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEE
Confidence 6677777777763 5899999999999999999998443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.78 E-value=7.5e-08 Score=89.58 Aligned_cols=99 Identities=11% Similarity=0.153 Sum_probs=72.3
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.|+++| +++.|+|.+ +...++..|+. |+.. ..+++.. ......-|
T Consensus 92 ~~~~l~~~~~~~L~~L~~~g---~~~~i~tn~-~~~~~~~~l~~~gl~~~f~~~~~~~--------------~~~~~kp~ 153 (224)
T d2hsza1 92 NISRLYPNVKETLEALKAQG---YILAVVTNK-PTKHVQPILTAFGIDHLFSEMLGGQ--------------SLPEIKPH 153 (224)
T ss_dssp SSCEECTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECTT--------------TSSSCTTS
T ss_pred cccchHHHHHHHHHHHhccC---Ccccccccc-cHHHHHHHHHhcCchhhcccccccc--------------cccccccc
Confidence 35678999999999999999 999999987 68888988887 7632 1222221 01112234
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
...+..++...+.+ ..++++||||.+|+.+.+.+|+ .|.+
T Consensus 154 p~~~~~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v 194 (224)
T d2hsza1 154 PAPFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGL 194 (224)
T ss_dssp SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred chhhHHHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEE
Confidence 46667777766663 5789999999999999999998 4444
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.76 E-value=2e-08 Score=93.22 Aligned_cols=99 Identities=16% Similarity=0.230 Sum_probs=71.0
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
.+++.+.||+.++++.+++ + +++.|||++. ...+...|+. ++.. ..|++.. ....+.-
T Consensus 78 ~~~~~~~~g~~~~L~~l~~-~---~~~~ivT~~~-~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~KP 138 (207)
T d2hdoa1 78 YDQIELYPGITSLFEQLPS-E---LRLGIVTSQR-RNELESGMRSYPFMMRMAVTISAD--------------DTPKRKP 138 (207)
T ss_dssp GGGCEECTTHHHHHHHSCT-T---SEEEEECSSC-HHHHHHHHTTSGGGGGEEEEECGG--------------GSSCCTT
T ss_pred ccccccccchhhhhhhhcc-c---cccccccccc-cccccccccccccccccccccccc--------------ccccchh
Confidence 4467899999999999964 5 7999999994 8888888877 5432 1122111 0111222
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
+...++..+++.+.. +.++++||||.+|+.+...+|+.+++
T Consensus 139 ~p~~~~~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~ 179 (207)
T d2hdoa1 139 DPLPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGL 179 (207)
T ss_dssp SSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred hhhhhcccccceeee-ccceeEecCCHHHHHHHHHcCCeEEE
Confidence 456777777777653 57899999999999999999986554
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.76 E-value=6.5e-08 Score=88.47 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=69.5
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
..+..+.||+.++++.++++| ++++|+|.+ +...+ ..|.. ++.. ..|++.+- .+..
T Consensus 75 ~~~~~~~~gv~~~l~~l~~~g---~~~~i~Sn~-~~~~~-~~l~~~~l~~~fd~i~~~~~----------------~~~~ 133 (187)
T d2fi1a1 75 LEHPILFEGVSDLLEDISNQG---GRHFLVSHR-NDQVL-EILEKTSIAAYFTEVVTSSS----------------GFKR 133 (187)
T ss_dssp TTSCCBCTTHHHHHHHHHHTT---CEEEEECSS-CTHHH-HHHHHTTCGGGEEEEECGGG----------------CCCC
T ss_pred hhcCcccchhHHHHHHHHhhh---ccccccccC-ccchh-hhhhhhcccccccccccccc----------------cccc
Confidence 346788999999999999998 999999976 55555 45665 5532 12222110 1112
Q ss_pred c--HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEcCChhHHH
Q 008499 460 K--VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSSSSLRR 509 (563)
Q Consensus 460 K--~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~~~~~L~~ 509 (563)
| ...++..+++++. ..+++|||+.+|+.+.+.+|+- |.+.....+++
T Consensus 134 KP~p~~~~~~~~~~~~---~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~ 183 (187)
T d2fi1a1 134 KPNPESMLYLREKYQI---SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQ 183 (187)
T ss_dssp TTSCHHHHHHHHHTTC---SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHH
T ss_pred CCCHHHHHHHHHHcCC---CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHh
Confidence 3 3456666666664 4699999999999999999994 55544444443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.75 E-value=3.7e-08 Score=92.64 Aligned_cols=99 Identities=16% Similarity=0.210 Sum_probs=63.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH-
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ- 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~- 462 (563)
...+.||+.++++.++++| ++++.|+|++ +...+...|+. |+... |+ .+.++. .......+..
T Consensus 89 ~~~~~~g~~~~L~~L~~~g--~~~~~v~t~~-~~~~~~~~l~~~gl~~~--------fd-~i~~~~---~~~~~k~~p~~ 153 (228)
T d2hcfa1 89 DITLLEGVRELLDALSSRS--DVLLGLLTGN-FEASGRHKLKLPGIDHY--------FP-FGAFAD---DALDRNELPHI 153 (228)
T ss_dssp GEEECTTHHHHHHHHHTCT--TEEEEEECSS-CHHHHHHHHHTTTCSTT--------CS-CEECTT---TCSSGGGHHHH
T ss_pred CceecCchHHHHhhhhccc--cccccccCCC-cchhhhhhhhhhccccc--------cc-cccccc---ccccccchhHH
Confidence 4678899999999999764 2688999988 57888888887 66321 11 111111 0011112223
Q ss_pred HHHHHHHHhCC-CCCccEEEEcCCcCchHHhhhcCcc
Q 008499 463 AFNNTLEKYGT-DRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 463 ~l~~~~~~~~~-~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
.+.......+. -.+.+++|||||.+|+.+...||+.
T Consensus 154 ~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~ 190 (228)
T d2hcfa1 154 ALERARRMTGANYSPSQIVIIGDTEHDIRCARELDAR 190 (228)
T ss_dssp HHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCE
T ss_pred HHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCE
Confidence 23333332221 1357899999999999999999984
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.61 E-value=4.6e-07 Score=86.55 Aligned_cols=96 Identities=13% Similarity=0.114 Sum_probs=67.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc--H
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK--V 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~ 461 (563)
...+.||+.++++.|+++| +++.|+|++ ....++..|+. ++... |.+...++.- .+..| .
T Consensus 97 ~~~~~~g~~~~L~~Lk~~g---~~i~i~Tn~-~~~~~~~~l~~~~l~~~--------f~d~~~~~d~-----~~~~KP~p 159 (257)
T d1swva_ 97 YASPINGVKEVIASLRERG---IKIGSTTGY-TREMMDIVAKEAALQGY--------KPDFLVTPDD-----VPAGRPYP 159 (257)
T ss_dssp GCCBCTTHHHHHHHHHHTT---CEEEEBCSS-CHHHHHHHHHHHHHTTC--------CCSCCBCGGG-----SSCCTTSS
T ss_pred cCccCCcHHHHHHHHHhcc---cceeecCCC-chhhHHHHHHHHhhccc--------cccccccccc-----ccccccCh
Confidence 4679999999999999999 999999987 57888888876 44211 1111111110 11122 2
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
..+...+.+.+......+++||||.+|+.+.+.||+
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence 455566666665434789999999999999999998
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.56 E-value=1.1e-07 Score=87.92 Aligned_cols=99 Identities=13% Similarity=0.153 Sum_probs=72.4
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
....+.||..++++.++.+ ..+.|+|.+ +...++..|+. |+... | +.++++. ..+..|..
T Consensus 81 ~~~~~~~~~~~~l~~l~~~----~~~~i~t~~-~~~~~~~~l~~~gl~~~--------f-d~v~~~~-----~~~~~~p~ 141 (210)
T d2ah5a1 81 YEAQLFPQIIDLLEELSSS----YPLYITTTK-DTSTAQDMAKNLEIHHF--------F-DGIYGSS-----PEAPHKAD 141 (210)
T ss_dssp GSCEECTTHHHHHHHHHTT----SCEEEEEEE-EHHHHHHHHHHTTCGGG--------C-SEEEEEC-----SSCCSHHH
T ss_pred hcccchhHHHHHHhhhhcc----cchhhcccc-cchhhhHHHHhhccccc--------c-ccccccc-----cccccccc
Confidence 3568899999999999865 489999999 58888888876 65321 1 1111111 12345777
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
.+...++..+. .+.++++||||.+|+.+...||+ .|.+.
T Consensus 142 ~~~~~~~~~~~-~~~~~v~VGDs~~Di~aa~~aGi~~i~v~ 181 (210)
T d2ah5a1 142 VIHQALQTHQL-APEQAIIIGDTKFDMLGARETGIQKLAIT 181 (210)
T ss_dssp HHHHHHHHTTC-CGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ccchhhhhhhc-ccccceeecCCHHHHHHHHHcCCeEEEEc
Confidence 78888888776 45899999999999999999998 55553
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=98.53 E-value=8.1e-07 Score=83.16 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=70.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc-eEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL-NVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
...+.||..+++..++++| +++.|+|.+ ..+.++..+.. ++... ..++.- +++. ..+--+..
T Consensus 125 ~~~~~pg~~e~l~~L~~~g---~~l~i~Tn~-~~~~~~~~~~~~~~~~~~~~~~~~--~d~~----------~~~KP~p~ 188 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAG---MKVYIYSSG-SVEAQKLLFGHSTEGDILELVDGH--FDTK----------IGHKVESE 188 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHTBTTBCCGGGCSEE--ECGG----------GCCTTCHH
T ss_pred ccccCCCHHHHHHHHhhcc---CceeecCCC-cHHHHHHHHHHcCcchhhhhccee--eccc----------cccCCCcH
Confidence 4678899999999999999 999999998 67777777765 44211 000000 1110 01122456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
.+...++..+.+ +.++++|||+.+|+.+.+.||+ .|.+
T Consensus 189 ~~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v 227 (253)
T d1zs9a1 189 SYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVV 227 (253)
T ss_dssp HHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 777777777774 5899999999999999999999 4444
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=98.50 E-value=1.4e-06 Score=80.59 Aligned_cols=98 Identities=13% Similarity=0.109 Sum_probs=71.4
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
.......|++.++++.+++++ +++.|+|.+ ....++..+.. ++.. ..+++.. ..+..
T Consensus 89 ~~~~~~~~~~~~~l~~l~~~~---~~~~i~tn~-~~~~~~~~~~~~~~~~~fd~~~~s~----------------~~~~~ 148 (220)
T d1zrna_ 89 YLRLAPFSEVPDSLRELKRRG---LKLAILSNG-SPQSIDAVVSHAGLRDGFDHLLSVD----------------PVQVY 148 (220)
T ss_dssp GGGCEECTTHHHHHHHHHHTT---CEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEESG----------------GGTCC
T ss_pred hccccccchhHHHHHHHHhcC---CeEEeecch-HHHHHHHHHhhccccccccceeeee----------------eeecc
Confidence 346788999999999999988 999999988 57777777765 4321 2222221 11223
Q ss_pred cH--HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEE
Q 008499 460 KV--QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVI 501 (563)
Q Consensus 460 K~--~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi 501 (563)
|. ..++..++..+. .+.++++|||+..|+.+.+.||+. |.+
T Consensus 149 KP~p~~~~~~~~~~g~-~p~e~l~VgD~~~Di~~A~~aG~~~v~v 192 (220)
T d1zrna_ 149 KPDNRVYELAEQALGL-DRSAILFVASNAWDATGARYFGFPTCWI 192 (220)
T ss_dssp TTSHHHHHHHHHHHTS-CGGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred ccHHHHHHHHHHHhCC-CCceEEEEecChHhHHHHHHcCCEEEEE
Confidence 43 577777777776 468999999999999999999984 445
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=98.49 E-value=2e-07 Score=83.80 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=70.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCC--cceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLN--ALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
...+.+|..+++..++.+| +.+.|+|.+. .......+.. ++. ...|++.+- .| .+--+
T Consensus 82 ~~~~~~~~~~l~~~l~~~~---~~~~i~t~~~-~~~~~~~~~~~~~l~~~fd~v~~s~~-------~~-------~~Kp~ 143 (197)
T d2b0ca1 82 FVALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEIRDAADHIYLSQD-------LG-------MRKPE 143 (197)
T ss_dssp EEEECHHHHHHHHHHHHTT---CEEEEEECCC-CCTTSCCGGGCHHHHHHCSEEEEHHH-------HT-------CCTTC
T ss_pred ccccCchhHHHHHHHHhcC---CeEEEEeCcc-HHHHHHHHHHcccchhhccceeeccc-------cc-------ccccc
Confidence 4578999999999999988 9999999763 2222222211 111 112222210 01 11124
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCChhHHHH
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRV 510 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~~L~~~ 510 (563)
...++..+++.+.+ +.++++||||.+|+.+...+|+ +|.+.++..+.++
T Consensus 144 ~~~~~~~~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~~~ 193 (197)
T d2b0ca1 144 ARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDY 193 (197)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHH
T ss_pred hHHHHHHHHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEECCCCCCHHh
Confidence 56777778877764 5889999999999999999999 7888766655543
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.45 E-value=5.9e-06 Score=77.84 Aligned_cols=96 Identities=18% Similarity=0.236 Sum_probs=69.8
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.+++ + ++++|+|.+ ....+...+.. |+.. ..|++.. ..+..|
T Consensus 106 ~~~~~~~~~~~~L~~L~~-~---~~l~i~Tn~-~~~~~~~~l~~~gl~~~fd~i~~s~----------------~~~~~K 164 (247)
T d2gfha1 106 QHMILADDVKAMLTELRK-E---VRLLLLTNG-DRQTQREKIEACACQSYFDAIVIGG----------------EQKEEK 164 (247)
T ss_dssp HTCCCCHHHHHHHHHHHT-T---SEEEEEECS-CHHHHHHHHHHHTCGGGCSEEEEGG----------------GSSSCT
T ss_pred ccCccCccHHHHHHHhhc-c---cceEEeecc-cchhhhhhhhhcccccccccccccc----------------ccccch
Confidence 367899999999999984 6 799999987 67888888877 6632 1222211 012234
Q ss_pred --HHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCcc-EEE
Q 008499 461 --VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI 501 (563)
Q Consensus 461 --~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-ivi 501 (563)
...++..+...+.+ +.++++|||+. +|+.+...+|+. +++
T Consensus 165 P~p~~~~~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~ 208 (247)
T d2gfha1 165 PAPSIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVW 208 (247)
T ss_dssp TCHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEE
T ss_pred hhhhhHHHHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEE
Confidence 46777788777763 57899999996 899999999985 444
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.41 E-value=2.8e-07 Score=80.28 Aligned_cols=90 Identities=23% Similarity=0.316 Sum_probs=66.3
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
++||+..+.++.|++.| +.++|+|+. .......+-+. |++ +++++ +...+|...++
T Consensus 21 ~lr~~a~~~I~~L~~~G---i~v~ilTGD-~~~~a~~ia~~lgI~--~v~~~-----------------~~p~~k~~~v~ 77 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMG---IKVGMITGD-NWRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEVK 77 (135)
T ss_dssp CBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCS--EEECS-----------------CCHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHcC---CEEEEEcCc-chhhhhHHHhhhhhh--hhccc-----------------cchhHHHHHHH
Confidence 69999999999999999 999999986 44444433232 542 22221 23346777777
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
++.. +..+.++|||.||.++|..||+||+++...
T Consensus 78 ~~q~------~~~v~~vGDg~nD~~aL~~Advgia~~~~~ 111 (135)
T d2b8ea1 78 KLQA------KEVVAFVGDGINDAPALAQADLGIAVGSGS 111 (135)
T ss_dssp HHTT------TSCEEEEECSSSSHHHHHHSSEEEEECCC-
T ss_pred HHHc------CCEEEEEeCCCCcHHHHHhCCeeeecCccC
Confidence 6553 357889999999999999999999998654
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=1e-06 Score=81.07 Aligned_cols=117 Identities=14% Similarity=0.106 Sum_probs=73.7
Q ss_pred HHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHh----C-CCC--cceEEeeccEecCccccCccccc
Q 008499 381 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS----S-GLN--ALNVHANEFSFKESISTGEIIEK 453 (563)
Q Consensus 381 ~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~----~-~l~--~~~I~aN~l~~~~g~~tG~~~~~ 453 (563)
.......+.||+.+++..++++| +++.|+|.+.. ......+. . ++. ...|++.. .
T Consensus 93 ~~~~~~~~~~~~~~~l~~L~~~~---~~~~i~Tn~~~-~~~~~~~~~~~~~~~~~~~fd~i~~s~--------------~ 154 (225)
T d1zd3a1 93 KAISARKINRPMLQAALMLRKKG---FTTAILTNTWL-DDRAERDGLAQLMCELKMHFDFLIESC--------------Q 154 (225)
T ss_dssp HHHHHCEECHHHHHHHHHHHHTT---CEEEEEECCCC-CCSTTHHHHHHHHHHHHTTSSEEEEHH--------------H
T ss_pred HHhhcCCCCccHHHHHHHHHhcc---Cccccccccch-hhHHHHHHHHhhhcChHhhccEEEecc--------------c
Confidence 34457889999999999999999 99999997632 11111111 1 111 12233221 0
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCCh-hHHHHHHhhCC
Q 008499 454 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSS-SLRRVGSQFGV 516 (563)
Q Consensus 454 ~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~-~L~~~~~~~gi 516 (563)
...+--+...++..++..+.. +..+++|||+.+|+.+.+.+|+ +|.+.... .+.++-+--|+
T Consensus 155 ~~~~KP~~~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~~~~l~~~~~~ 218 (225)
T d1zd3a1 155 VGMVKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGI 218 (225)
T ss_dssp HTCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSSHHHHHHHHHHHHTS
T ss_pred cccchhHHHHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEECCcchhHHHHHHccCc
Confidence 111112456777788877764 5789999999999999999999 66665443 23333333444
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=98.33 E-value=1e-05 Score=75.73 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=67.3
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
......|+..+.++.++ + ..+.++|.+ +...+...+.. ++.. ..|++.+ ..+..|
T Consensus 90 ~~~~~~~~~~~~L~~l~--~---~~~~v~s~~-~~~~~~~~~~~~~~~~~fd~v~~s~----------------~~~~~K 147 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELA--P---LKRAILSNG-APDMLQALVANAGLTDSFDAVISVD----------------AKRVFK 147 (245)
T ss_dssp GSCCBCTTHHHHHHHHT--T---SEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGG----------------GGTCCT
T ss_pred cccccchhhhHHHHHHh--h---hceeEEecc-chHHHHHHHhhcccccccccccccc----------------cccccC
Confidence 35788899999998885 4 678888888 46777777765 4421 2233222 012234
Q ss_pred --HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 461 --VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 461 --~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
...+...++..+.. +.++++|||+.+|+.+...||+ .|.+.
T Consensus 148 P~p~~f~~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~ 191 (245)
T d1qq5a_ 148 PHPDSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVA 191 (245)
T ss_dssp TSHHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred ccHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 35677777777764 5789999999999999999998 45554
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=98.30 E-value=7.6e-07 Score=82.73 Aligned_cols=100 Identities=14% Similarity=0.181 Sum_probs=67.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
...+.||+.++++.++++| +.+.++|.+ ......+.. ++.+. |+ .+.++. ....+--+...
T Consensus 89 ~~~~~~g~~~~l~~l~~~~---~~i~i~s~~---~~~~~~l~~~~l~~~--------f~-~i~~~~---~~~~~KP~~~~ 150 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNK---IKIALASAS---KNGPFLLERMNLTGY--------FD-AIADPA---EVAASKPAPDI 150 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTT---CEEEECCSC---TTHHHHHHHTTCGGG--------CS-EECCTT---TSSSCTTSTHH
T ss_pred cccccCCceeccccccccc---cceEEEeec---chhhHHHHhhccccc--------cc-cccccc---cccccccChHH
Confidence 4578899999999999988 999999975 234555554 44221 11 111111 01111123467
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcC
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGS 503 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~ 503 (563)
++..++..+.+ +.++++|||+.+|+.+.+.+|+ .|.++.
T Consensus 151 ~~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence 88888888874 5789999999999999999998 566653
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.28 E-value=9.6e-07 Score=81.77 Aligned_cols=117 Identities=15% Similarity=0.101 Sum_probs=75.4
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccC---hHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVES 456 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws---~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~ 456 (563)
.....++||+.+++..+++++ +++.|+|.+.. .......+.. ++.+ ..|++++- .| .
T Consensus 93 ~~~~~~~~~~~~~L~~L~~~~---~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~-------~~-------~ 155 (222)
T d1cr6a1 93 MAARSINRPMLQAAIALKKKG---FTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQ-------VG-------M 155 (222)
T ss_dssp HHTCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHH-------HS-------C
T ss_pred HhcCCCCccHHHHHHHHHhcC---CceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhh-------cc-------C
Confidence 345788999999999999999 99999997532 1122222222 2221 23333321 01 1
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCC-hhHHHHHHhhCCe
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS-SSLRRVGSQFGVT 517 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~-~~L~~~~~~~gi~ 517 (563)
+--....+...++..+.+ +.++++|||+.+|+.+.+.+|+ +|.+... ..+.+..+-.|+.
T Consensus 156 ~KP~p~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~~~~~~ 217 (222)
T d1cr6a1 156 IKPEPQIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKVTGTQ 217 (222)
T ss_dssp CTTCHHHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHHHHSCC
T ss_pred CCCChHHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHHhhCCC
Confidence 112356677777777764 5789999999999999999998 6777533 4455554545665
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.27 E-value=1.2e-06 Score=81.27 Aligned_cols=99 Identities=16% Similarity=0.204 Sum_probs=65.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc--H
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK--V 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~ 461 (563)
...+.||..++++.++ .+..|+|++ ....++..|.. ++... |+....++.- ...+..| .
T Consensus 83 ~~~~~~g~~~~L~~l~------~~~~i~t~~-~~~~~~~~l~~~~l~~~--------f~~~~~~~~~---~~~~~~KP~~ 144 (222)
T d2fdra1 83 DVKIIDGVKFALSRLT------TPRCICSNS-SSHRLDMMLTKVGLKPY--------FAPHIYSAKD---LGADRVKPKP 144 (222)
T ss_dssp HCCBCTTHHHHHHHCC------SCEEEEESS-CHHHHHHHHHHTTCGGG--------TTTCEEEHHH---HCTTCCTTSS
T ss_pred ccchhhhHHHHhhhcc------ccceeeeec-chhhhhhhhcccccccc--------cceeeccccc---ccccccccCH
Confidence 5789999999998775 456788988 47788888876 55321 1111111110 0011123 3
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
..+...+...+. .+.++++||||..|+.+.+.+|+ .|.+.
T Consensus 145 ~~~~~~~~~l~~-~p~~~l~vgDs~~dv~aA~~aG~~~i~v~ 185 (222)
T d2fdra1 145 DIFLHGAAQFGV-SPDRVVVVEDSVHGIHGARAAGMRVIGFT 185 (222)
T ss_dssp HHHHHHHHHHTC-CGGGEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHhhCC-CCceEEEEcCCHHHHHHHHHcCCEEEEEc
Confidence 566667777776 35899999999999999999998 45564
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.22 E-value=5.7e-07 Score=81.35 Aligned_cols=112 Identities=18% Similarity=0.153 Sum_probs=72.1
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEE-----eeccEecCc--c----ccCcccc
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVH-----ANEFSFKES--I----STGEIIE 452 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~-----aN~l~~~~g--~----~tG~~~~ 452 (563)
++||+..+.++.|++.| +.++++|+- +...-..+-++ |+. +..+. ..++..... . ....+..
T Consensus 20 p~R~~~~~~I~~l~~~G---I~v~miTGD-~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 95 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAG---IRVIMITGD-NKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFA 95 (168)
T ss_dssp CBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEE
T ss_pred CCchhHHHHHHHHHHCc---CEEEEECCC-CHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhh
Confidence 78999999999999999 999999986 34333333333 542 11111 011100000 0 0000011
Q ss_pred cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHH
Q 008499 453 KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 508 (563)
Q Consensus 453 ~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~ 508 (563)
-+++.+|...++.+... +..+.++|||.||.++|..||+||.++....+.
T Consensus 96 -r~~p~~K~~lv~~l~~~-----g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a 145 (168)
T d1wpga2 96 -RVEPSHKSKIVEYLQSY-----DEITAMTGDGVNDAPALKKAEIGIAMGSGTAVA 145 (168)
T ss_dssp -SCCHHHHHHHHHHHHHT-----TCCEEEEECSGGGHHHHHHSSEEEEETTSCHHH
T ss_pred -ccchhHHHHHHHHHHhc-----ccceeEEecCCCCHHHHHhCCEEEEeccccHHH
Confidence 24556898888887763 467889999999999999999999998655444
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.11 E-value=1.2e-05 Score=74.97 Aligned_cols=72 Identities=19% Similarity=0.210 Sum_probs=54.1
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeee---ecCchhHHhHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFI---PLYPGLVKKQK 530 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~---p~~~~~~~~~~ 530 (563)
..+.+|...++.+++.++.+ ..++++||||.||++|+..||+||+++ +.+.+++.+ .++ |-..+++..++
T Consensus 147 ~~~~~K~~ai~~l~~~~~i~-~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~a-----d~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 147 NRGEDKAFAVNKLKEMYSLE-YDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVS-----DFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp ETTCSHHHHHHHHHHHTTCC-GGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHC-----SEECSCCTTHHHHHHHH
T ss_pred CCccchHHHHHHHhhhhccc-hhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhC-----CEEECCCCcCHHHHHHH
Confidence 34578999999999988764 478999999999999999999999996 566666554 233 22345555555
Q ss_pred hh
Q 008499 531 EY 532 (563)
Q Consensus 531 ~~ 532 (563)
.|
T Consensus 221 ~~ 222 (225)
T d1l6ra_ 221 HF 222 (225)
T ss_dssp HT
T ss_pred Hh
Confidence 44
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.10 E-value=6.4e-06 Score=76.19 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=46.2
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+..|...++.++...+.+ ...+++||||.||++|+..||+||+++ +++.+++.|
T Consensus 149 ~~~~K~~al~~l~~~~~i~-~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A 204 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENA 204 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTC
T ss_pred CCcCcchhhcccccccccc-hhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhC
Confidence 4678999999999888764 578999999999999999999999996 556666554
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.08 E-value=1e-05 Score=77.78 Aligned_cols=54 Identities=20% Similarity=0.318 Sum_probs=46.5
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
+.+|...++.+++.++.+ ..+++++|||.||++||..|++||+++ +.+.+++.+
T Consensus 211 ~~~K~~ai~~l~~~~gi~-~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A 265 (285)
T d1nrwa_ 211 KASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIA 265 (285)
T ss_dssp TCSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHC
T ss_pred cchhhhHHHHHHhhcccC-cccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhC
Confidence 358999999999988763 578999999999999999999999997 556777666
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.05 E-value=6.2e-06 Score=76.94 Aligned_cols=124 Identities=19% Similarity=0.329 Sum_probs=94.0
Q ss_pred CCCCHHHHHHHhc-cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-cc---
Q 008499 372 KGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-SI--- 445 (563)
Q Consensus 372 ~Gi~~~~i~~~~~-~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-g~--- 445 (563)
.|++-+++.++.+ ++.+-||+.+.++.+++. .|.+|||-++ ..+|++.-.. |++ .++++.++.+|. ..
T Consensus 65 ~Gvt~edL~~fSE~~~~lvpgA~~~lk~l~~~----m~~yIvSTSY-~qyi~al~~~~gfp-~e~~~T~~~lD~~~~p~e 138 (308)
T d1y8aa1 65 AGVKNRDVERIAELSAKFVPDAEKAMATLQER----WTPVVISTSY-TQYLRRTASMIGVR-GELHGTEVDFDSIAVPEG 138 (308)
T ss_dssp TTCCHHHHHHHHHHHCCBCTTHHHHHHHHHTT----CEEEEEEEEE-HHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHH
T ss_pred hCCCHHHHHHHhhhceeecCCHHHHHHHHHhh----CCcEEEeccH-HHHHHHHHhhcCCC-ceeecccccccccCCChH
Confidence 6899999999988 899999999999999865 6999999997 7788876655 886 459999998872 11
Q ss_pred ------------ccC-------------------ccc--ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHh
Q 008499 446 ------------STG-------------------EII--EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL 492 (563)
Q Consensus 446 ------------~tG-------------------~~~--~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l 492 (563)
..| ++. -+...|..|.++++.++...+.. -..|||||.||..||
T Consensus 139 e~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~---~~~~VGDSITDve~L 215 (308)
T d1y8aa1 139 LREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGID---FPVVVGDSISDYKMF 215 (308)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCS---SCEEEECSGGGHHHH
T ss_pred HHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCC---cceeccCccccHHHH
Confidence 111 111 12445567888888888877653 359999999999999
Q ss_pred hhc----CccEEEcCC
Q 008499 493 LEA----DIGIVIGSS 504 (563)
Q Consensus 493 ~~A----d~givi~~~ 504 (563)
+.+ |+.|.|+.+
T Consensus 216 r~~r~~gGlaIsFNGN 231 (308)
T d1y8aa1 216 EAARGLGGVAIAFNGN 231 (308)
T ss_dssp HHHHHTTCEEEEESCC
T ss_pred HHHhcCCCeeEEecCc
Confidence 986 445555544
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.99 E-value=4.3e-06 Score=78.94 Aligned_cols=62 Identities=16% Similarity=0.192 Sum_probs=54.5
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCe
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVT 517 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~ 517 (563)
..+.+|...++.+++..+.+ ..+++++|||.||++|+..||.||+++ +.+.|++++...+..
T Consensus 158 ~~~~~K~~a~~~l~~~~gi~-~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~ 220 (244)
T d1s2oa1 158 PQRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDS 220 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCT
T ss_pred eCccchhHHHHHHHHhccCC-hhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhccccc
Confidence 45678999999999988874 478999999999999999999999996 678999999887764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=1.8e-05 Score=75.44 Aligned_cols=74 Identities=16% Similarity=0.271 Sum_probs=57.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecC---chhHHhHHh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQKE 531 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~~ 531 (563)
.+.+|...++.+++..+.+ ..+++++|||.||++|+..|++||+++ +.+.|++.|. ++--. .|+...++.
T Consensus 187 ~~~sK~~al~~l~~~lgi~-~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~-----~v~~~~~~~Gva~~i~~ 260 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIAR-----YATDDNNHEGALNVIQA 260 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCS-----EECCCGGGTHHHHHHHH
T ss_pred CchHHHHHHHHHhhhhccc-cccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCC-----EEcCCCCccHHHHHHHH
Confidence 4567999999999988874 478999999999999999999999997 5577887773 44322 356666666
Q ss_pred hhcC
Q 008499 532 YTEG 535 (563)
Q Consensus 532 ~~~~ 535 (563)
+.++
T Consensus 261 ~l~~ 264 (269)
T d1rlma_ 261 VLDN 264 (269)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 6554
|
| >d1n45a_ a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: Eukaryotic type heme oxygenase domain: Heme oxygenase-1 (HO-1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.75 E-value=0.0012 Score=61.02 Aligned_cols=196 Identities=12% Similarity=0.079 Sum_probs=117.3
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CHHHHHHHHHHH
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECAD-----DDDAKLSISELR 88 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~-----~~~~~~~l~~~~ 88 (563)
..|+++|-+.....-..+-++||++.|-+|+++.+.+..||.|=+.+....-+.+........ .++++..
T Consensus 2 ~~ls~~Lr~~T~~~H~~~E~~~~~~~l~~g~~t~~~Y~~~L~~~y~vy~~lE~~l~~~~~~~~~~~~~~~~~~~R----- 76 (214)
T d1n45a_ 2 QDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHR----- 76 (214)
T ss_dssp CSHHHHHHHHTHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTGGGCCHHHHCC-----
T ss_pred ccHHHHHHHHHHHHHHHHHcChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCccchhhcChHhhcc-----
Confidence 348888877665544445579999999999999999999999999888777776655432211 1121111
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 008499 89 KGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (563)
Q Consensus 89 ~~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (563)
.-.+..++..-.|....+..++.|+|..|++++..++..+. ..+++.++.-+-+-.
T Consensus 77 -----~~~l~~DL~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------------------~~llg~~YV~e~g~~ 132 (214)
T d1n45a_ 77 -----KAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEP-------------------ELLVAHAYTRYLGDL 132 (214)
T ss_dssp -----HHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHHHHHHHHH
T ss_pred -----chhHHHHHHHhcCCchhccCCCChHHHHHHHHHhhhcccCH-------------------HHHHHHHHHHHHHHh
Confidence 11222222222455555556789999999999988875332 345666666554544
Q ss_pred HHHHHHHh----hccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhc
Q 008499 169 FLGKEFHA----LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFC 241 (563)
Q Consensus 169 ~ig~~~~~----~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~ 241 (563)
.-|+.+.+ ..+ .+++..-..+...|...+=..+-..+.+.+|++. +++++.+++.+-=..+-++=.+.|+
T Consensus 133 ~GGq~i~~~~~~~l~-l~~~~~~~~f~~~~~~~~~~~~k~~f~~~l~~~~--~~~~~~~~ii~eA~~aF~~~~~lf~ 206 (214)
T d1n45a_ 133 SGGQVLKKIAQKALD-LPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLE--MTPAVRQRVIEEAKTAFLLNIQLFE 206 (214)
T ss_dssp HHHHHHHHHHHHHHC-CCSCSCSCGGGCCTTCSCHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcC-CCCCCCcceeeecCCcccHHHHHHHHHHHHHccc--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433 222 1111112223334443333444456888888774 5777777776655555555444444
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.71 E-value=4.7e-05 Score=67.58 Aligned_cols=97 Identities=13% Similarity=0.073 Sum_probs=69.6
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
+.+.+.||+.++++.|+++| +++.|+|.+......+..++. ++... + ... ......|..
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G---~~~~v~S~~~~~~~~~~~l~~~~~~~~--------~-~~~--------~~~~kp~~~ 102 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLG---VPVAAASRTSEIQGANQLLELFDLGKY--------F-IQR--------EIYPGSKVT 102 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTT---CCEEEEECCSCHHHHHHHHHHTTCGGG--------C-SEE--------EESSSCHHH
T ss_pred cccccchHHHHHHHHHHHCC---CcEEEEeccccchhhccchhccccccc--------c-eee--------ecccCCChH
Confidence 45789999999999999999 999999987434455555544 32110 0 000 011224667
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.+.++++..+.. +.++++|||+..|+.+.+.+|+-.+.
T Consensus 103 ~~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~~i~ 140 (164)
T d1u7pa_ 103 HFERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVTCIH 140 (164)
T ss_dssp HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCEEEE
Confidence 788888888763 58999999999999999999984433
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.70 E-value=3.7e-05 Score=69.58 Aligned_cols=90 Identities=17% Similarity=0.274 Sum_probs=62.9
Q ss_pred HHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCC
Q 008499 396 FQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474 (563)
Q Consensus 396 l~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~ 474 (563)
++.+++.| +.+.++|+. ....+...... ++. .++ ....+|...++.++..++..
T Consensus 41 i~~l~~~g---i~~~iis~~-~~~~v~~~~~~l~~~--~~~-------------------~~~~~K~~~l~~~~~~~~i~ 95 (177)
T d1k1ea_ 41 IKMLMDAD---IQVAVLSGR-DSPILRRRIADLGIK--LFF-------------------LGKLEKETACFDLMKQAGVT 95 (177)
T ss_dssp HHHHHHTT---CEEEEEESC-CCHHHHHHHHHHTCC--EEE-------------------ESCSCHHHHHHHHHHHHTCC
T ss_pred HHHHhhhc---EEEEEecCC-chhHHHHHHhhhccc--ccc-------------------cccccHHHHHHHHHHHhcCC
Confidence 55667777 999999986 34444444333 321 111 12346888899999888774
Q ss_pred CCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHH
Q 008499 475 RKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 511 (563)
Q Consensus 475 ~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~ 511 (563)
..+++|+||+.||++||..|++++++++ .+.++++|
T Consensus 96 -~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A 132 (177)
T d1k1ea_ 96 -AEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 132 (177)
T ss_dssp -GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTS
T ss_pred -cceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhC
Confidence 5899999999999999999999999874 34444333
|
| >d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium diphtheriae [TaxId: 1717]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: Eukaryotic type heme oxygenase domain: Heme oxygenase HmuO species: Corynebacterium diphtheriae [TaxId: 1717]
Probab=97.69 E-value=0.0017 Score=59.57 Aligned_cols=191 Identities=15% Similarity=0.084 Sum_probs=111.9
Q ss_pred hHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CHHHHHHHHHHHH
Q 008499 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECAD-----DDDAKLSISELRK 89 (563)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~-----~~~~~~~l~~~~~ 89 (563)
+|+.+|-+.....-..+=++||+..|.+|+++.+.+..||.+=|++....-.++........ +++ ..+..
T Consensus 1 ~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~~~~~~~-~~R~~---- 75 (207)
T d1wzda1 1 GLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLDPA-LNRAE---- 75 (207)
T ss_dssp CHHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSCGG-GCCHH----
T ss_pred CHHHHHHHHHHHHHHHHHcChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhccCHH-Hhhhh----
Confidence 46777776654443444579999999999999999999999999997766666554432211 111 11111
Q ss_pred HHHHHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 008499 90 GVLEELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY 167 (563)
Q Consensus 90 ~i~~E~~~h~~~~~~~gi~~~--~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y 167 (563)
.+.. =++.+|.+.+ ...++.|++..|++++...+.... ++.+++.++.-+.+-
T Consensus 76 ~l~~-------DL~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~------------------p~~llg~~Yv~e~G~ 130 (207)
T d1wzda1 76 VLAR-------DLDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVD------------------GPALVAHHYVRYLGD 130 (207)
T ss_dssp HHHH-------HHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTC------------------HHHHHHHHHHHHHHH
T ss_pred hHHH-------HHHHHcCCccccccCCCChhHHHHHHHHHHHhccCC------------------HHHHHHHHHHHHHHH
Confidence 1111 1233444432 356789999999999998874221 245666666655444
Q ss_pred HHHHHHH----HhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhh
Q 008499 168 AFLGKEF----HALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240 (563)
Q Consensus 168 ~~ig~~~----~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw 240 (563)
..-|+.+ ++..+.. +.--.+..++..++-...-..+++.||++. .++++++++.+-=..+-.+=...|
T Consensus 131 ~~GGq~i~k~l~~~l~l~---~~~~~fy~f~~~~~~~~~k~~~r~~l~~~~--~~~~~~~~ii~eA~~aF~~~~~if 202 (207)
T d1wzda1 131 LSGGQVIARMMQRHYGVD---PEALGFYHFEGIAKLKVYKDEYREKLNNLE--LSDEQREHLLKEATDAFVFNHQVF 202 (207)
T ss_dssp HHHHHHHHHHHHHHHCCC---GGGCGGGCCTTCSCHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHcCCC---CCCccccccCCcCCHHHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444 3333211 111223333443444455567788888764 678877777665555544444333
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.59 E-value=2.7e-05 Score=74.12 Aligned_cols=72 Identities=18% Similarity=0.395 Sum_probs=56.0
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecC---chhHHhHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQK 530 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~ 530 (563)
..+.+|...++.+++..+.+ ..+++++|||.||++|+..||.||+++ +.+.|++.|. ++--. .|++..++
T Consensus 182 p~~~sK~~al~~l~~~~~i~-~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~-----~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 182 AKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD-----YVTAPIDEDGISKAMK 255 (260)
T ss_dssp STTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS-----EECCCGGGTHHHHHHH
T ss_pred eCCCCHHHHHHHHHHhcccc-HhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCC-----EEeCCCCccHHHHHHH
Confidence 34568999999999988764 578999999999999999999999998 5678887773 44222 35555555
Q ss_pred hh
Q 008499 531 EY 532 (563)
Q Consensus 531 ~~ 532 (563)
.|
T Consensus 256 ~~ 257 (260)
T d2rbka1 256 HF 257 (260)
T ss_dssp HH
T ss_pred Hh
Confidence 44
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=97.58 E-value=2.4e-05 Score=79.46 Aligned_cols=107 Identities=18% Similarity=0.173 Sum_probs=65.1
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC----cceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN----ALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~----~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
+.+||..++++.|+++| +++.|+|+. .....+.++++ |+. ...+++..= ...+...........|.
T Consensus 215 ~p~~~v~~~l~~lk~aG---i~v~i~Tg~-~~~~a~~il~~lgl~~~F~~~~i~~~~d-----~~~~~~~~~~~~~~~KP 285 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAG---FELGIATGR-PYTETVVPFENLGLLPYFEADFIATASD-----VLEAENMYPQARPLGKP 285 (380)
T ss_dssp SCHHHHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCGGGSCGGGEECHHH-----HHHHHHHSTTSCCCCTT
T ss_pred cchhhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCcccCCcceEEecch-----hhhhhhhccccccccCC
Confidence 45569999999999999 999999998 57788888877 652 223333211 11110000001111111
Q ss_pred --HHHHHHH--------------HHhCCCCCccEEEEcCCcCchHHhhhcC---ccEEEcC
Q 008499 462 --QAFNNTL--------------EKYGTDRKNLSVYIGDSVGDLLCLLEAD---IGIVIGS 503 (563)
Q Consensus 462 --~~l~~~~--------------~~~~~~~~~~viyiGDs~~Dl~~l~~Ad---~givi~~ 503 (563)
..+...+ ...+. .+..+++||||.+|+++++.|| |||.+|-
T Consensus 286 ~p~~~~~~~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~ 345 (380)
T d1qyia_ 286 NPFSYIAALYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345 (380)
T ss_dssp STHHHHHHHHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBT
T ss_pred ChHHHHHHHHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCC
Confidence 1111111 11122 3467999999999999999999 6777763
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=97.52 E-value=2.6e-05 Score=74.50 Aligned_cols=55 Identities=22% Similarity=0.306 Sum_probs=47.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++.++.+ ..++++||||.||++||..||+||+++ +.+.+++.|
T Consensus 187 ~~~~K~~ai~~l~~~~~i~-~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A 242 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEAS 242 (267)
T ss_dssp TTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHC
T ss_pred CCCchhHHHHHHHHhhccC-cccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhC
Confidence 4567999999999988874 578999999999999999999999997 446777766
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=4.5e-05 Score=72.54 Aligned_cols=55 Identities=18% Similarity=0.322 Sum_probs=47.1
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++..+.+ ..+++++|||.||++|++.|++||+++ +.+.|++.+
T Consensus 194 ~~~~K~~al~~l~~~~~i~-~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a 249 (271)
T d1rkqa_ 194 KRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVA 249 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC
T ss_pred CCCCcccccceehhhcccc-hhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhC
Confidence 4568999999999988764 468999999999999999999999997 456777665
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=97.47 E-value=5e-05 Score=72.38 Aligned_cols=55 Identities=18% Similarity=0.295 Sum_probs=46.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+.+..+.+ ...++++|||.||++|+..||+||+++ +.+.+++.|
T Consensus 204 ~~~~K~~~l~~l~~~~~i~-~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a 259 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHA 259 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHS
T ss_pred CcchhHHHHHHHhhhcccc-cceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhC
Confidence 4567999999999887764 578999999999999999999999997 456777666
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.45 E-value=0.00017 Score=62.26 Aligned_cols=25 Identities=8% Similarity=-0.072 Sum_probs=22.9
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEcc
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSY 414 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~ 414 (563)
.+.||..++++.++++| +.++++|+
T Consensus 36 ~~~p~v~~~l~~l~~~G---~~Iii~T~ 60 (149)
T d1ltqa1 36 VINPMVVELSKMYALMG---YQIVVVSG 60 (149)
T ss_dssp CBCHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred ccCHHHHHHHHHHHhcc---CeEEEEec
Confidence 56799999999999999 99999997
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=97.43 E-value=6.5e-05 Score=66.83 Aligned_cols=107 Identities=18% Similarity=0.213 Sum_probs=62.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccc-------cCh-------HhhHHHHhC-CCCcceEEeeccEecCccccCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC-------WCG-------DLIRASFSS-GLNALNVHANEFSFKESISTGE 449 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~g-------ws~-------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~ 449 (563)
.+.+-||..++++.++++| +.++|+|.. ++. ..+...|.. ++....|+...-...++. .
T Consensus 28 ~~~~~pgv~e~L~~L~~~g---~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~---~ 101 (161)
T d2fpwa1 28 KLAFEPGVIPQLLKLQKAG---YKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADEC---D 101 (161)
T ss_dssp GCCBCTTHHHHHHHHHHTT---EEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCC---S
T ss_pred HceECccHHHHHHHHHHcC---CceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccc---c
Confidence 4678899999999999999 999999963 110 122333333 443333332221111110 0
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCC
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS 504 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~ 504 (563)
..++. ...+.+++++++.+ +.+++||||+.+|+.|...||+ +|.+.+.
T Consensus 102 ~~KP~------p~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~ 150 (161)
T d2fpwa1 102 CRKPK------VKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE 150 (161)
T ss_dssp SSTTS------SGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ccccc------cHHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence 01111 13444555556653 5789999999999999999999 6666544
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.40 E-value=5.3e-05 Score=70.44 Aligned_cols=50 Identities=26% Similarity=0.206 Sum_probs=41.3
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
..+.+|...++.++..++.....+++++|||.||++|+..||+||++++.
T Consensus 175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na 224 (243)
T d1wzca1 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSL 224 (243)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCC
Confidence 34668999999888876422356899999999999999999999999843
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=97.40 E-value=0.00026 Score=65.54 Aligned_cols=108 Identities=14% Similarity=0.161 Sum_probs=65.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcc-------ccCh-------HhhHHHHhC-CCCcceEEeeccEecCccccCcc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSY-------CWCG-------DLIRASFSS-GLNALNVHANEFSFKESISTGEI 450 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~-------gws~-------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~ 450 (563)
+.+-||+.+.++.|+++| +.++|||. .++. ..+...|+. |.....++..... .++. +..
T Consensus 47 ~~l~pgv~e~L~~L~~~G---~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~-~~~~--~~~ 120 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAG---IPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYH-EAGV--GPL 120 (209)
T ss_dssp CCBCGGGHHHHHHHHHHT---CCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCC-TTCC--STT
T ss_pred eEecccHHHHHHHHHhhC---CeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccc-cccc--ccc
Confidence 567899999999999999 99999994 1111 112233333 4333333333321 1110 111
Q ss_pred cccCCCCCCc--HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 451 IEKVESPIDK--VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 451 ~~~~~~g~~K--~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
... -+..-| ...+.+.++.++.+ ..+++||||+.+|+.+...|++ ++++
T Consensus 121 ~~~-~~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v 172 (209)
T d2o2xa1 121 AIP-DHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWL 172 (209)
T ss_dssp CCS-SCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEE
T ss_pred ccc-ccccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEE
Confidence 101 111224 35677777777764 5789999999999999999998 4444
|
| >d1we1a_ a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: Eukaryotic type heme oxygenase domain: Heme oxygenase-1 (HO-1) species: Synechocystis sp. [TaxId: 1143]
Probab=97.34 E-value=0.0022 Score=59.45 Aligned_cols=198 Identities=10% Similarity=0.096 Sum_probs=114.8
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~ 93 (563)
.+|+.+|-+.....-..+-++||++.|..|.++.+.+..||.|=|++.....+++........ .... .+. .+.+
T Consensus 2 ~~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~~s~~~Y~~~L~~~y~vy~~lE~~l~~~~~~~~-~~~~-~~~----~~~R 75 (222)
T d1we1a_ 2 VNLASQLREGTKKSHSMAENVGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKDHPI-LSHI-YFP----ELNR 75 (222)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSTT-GGGG-CCT----TSCC
T ss_pred ccHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-cccc-cCh----hhhh
Confidence 568888887765555556689999999999999999999999988887766665543322110 0000 000 0011
Q ss_pred HHHHHHHHHHHhCCC-cccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 008499 94 ELKMHDSFVKEWGTD-LAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGK 172 (563)
Q Consensus 94 E~~~h~~~~~~~gi~-~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~ 172 (563)
-..+..++. .+|.+ ......+.|++..|++++...+..+. +.+++.++.-+-+-..-|+
T Consensus 76 ~~~l~~DL~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------------------~~llg~~YV~~~g~~~GGq 135 (222)
T d1we1a_ 76 KQSLEQDLQ-FYYGSNWRQEVKISAAGQAYVDRVRQVAATAP-------------------ELLVAHSYTRYLGDLSGGQ 135 (222)
T ss_dssp HHHHHHHHH-HHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HccCccccccCCCChhHHHHHHHHHhhhccCH-------------------HHHHHHHHHHHHHHhhhhH
Confidence 112223332 23333 23456789999999999998885432 3456666665545444444
Q ss_pred HHH----hhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 008499 173 EFH----ALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242 (563)
Q Consensus 173 ~~~----~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~ 242 (563)
.+. +..+-. + ... .+..++...+-...=....+.+|++. .++++.+++.+-=..+-++=.+.|++
T Consensus 136 ~i~~~~~~~~~l~-~-~~~-~fy~~~~~~~~~~~k~~~~~~l~~~~--~~~~~~~~ii~eA~~aF~~~~~lf~e 204 (222)
T d1we1a_ 136 ILKKIAQNAMNLH-D-GGT-AFYEFADIDDEKAFKNTYRQAMNDLP--IDQATAERIVDEANDAFAMNMKMFNE 204 (222)
T ss_dssp HHHHHHHHHHTCS-S-SSC-GGGCCTTCSSHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-C-CCc-cceecCCcccHHHHHHHHHHHHHccC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 322211 1 111 23333343443444456778888764 57777777766655555555555543
|
| >d1wova1 a.132.1.1 (A:2-250) Heme oxygenase 2 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: Eukaryotic type heme oxygenase domain: Heme oxygenase 2 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.31 E-value=0.0065 Score=57.31 Aligned_cols=200 Identities=15% Similarity=0.149 Sum_probs=110.7
Q ss_pred hHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHH
Q 008499 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-DDDDAKLSISELRKGVLE 93 (563)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a-~~~~~~~~l~~~~~~i~~ 93 (563)
.|+.+|-+.....-..+-+++|++.+..|.++.+.+..||.|=|+.... +..++.+. .++....+. ...+.+
T Consensus 2 ~ls~~Lre~T~~~H~~aE~~~f~~~l~~g~~s~~~Y~~~L~~~y~vY~~----LE~~~~~~~~~~~~~~~~---~~~l~R 74 (249)
T d1wova1 2 NLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYSA----LEAALRQHRDNEIISAIY---FPELNR 74 (249)
T ss_dssp CHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHH----HHHHHHHTTTSHHHHHHC---CGGGCC
T ss_pred cHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHH----HHHHHHhcCCCccccccc---Chhhhc
Confidence 4677777665444445668999999999999999999999998864433 33333332 222211110 001111
Q ss_pred HHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH----HH
Q 008499 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY----AF 169 (563)
Q Consensus 94 E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y----~~ 169 (563)
.-.+-.++..-+|-+......|.|++..|++++..++..+. ...++-++.-+.+= ..
T Consensus 75 ~~~l~~DL~~l~g~~~~~~~~~~~at~~Yv~~i~~i~~~~P-------------------~~llah~YvrylGdlsGGQ~ 135 (249)
T d1wova1 75 TDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEP-------------------ELLIAHCYTRYLGDLSGGQS 135 (249)
T ss_dssp HHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHHHHHHHHTTHHHH
T ss_pred chhHHHHHHHHcCCCchhcCCCChHHHHHHHHHHHHHhhCH-------------------HHHHHHHHHHHHHHhccchH
Confidence 12233333334565555556789999999999988875332 11223222222111 22
Q ss_pred HHHHHHhhccC-CCCcccccccccccCC-hhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 170 LGKEFHALLNA-NEGNHPYTKWIDNYSS-ESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 170 ig~~~~~~~~~-~~~~~~y~~Wi~~y~s-~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
|++.+.+..+. ......|..|=+. .. .+-..+-..+.+.+|.+. +++++++++.+-=..+-++=.+.|.+-
T Consensus 136 I~k~l~~~l~l~~~~g~~fy~F~~~-~~~~d~~~fK~~~r~~ld~~~--~~~~~~~~ii~EA~~aF~ln~~lf~eL 208 (249)
T d1wova1 136 LKNIIRSALQLPEGEGTAMYEFDSL-PTPGDRRQFKEIYRDVLNSLP--LDEATINRIVEEANYAFSLNREVMHDL 208 (249)
T ss_dssp HHHHHHHHTTCCTTSSCGGGCCTTC-CSHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcCCCCCCccceeecCCC-CchhHHHHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334433221 1122233333221 11 123455667778888764 678888877776666666666666643
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.17 E-value=0.00082 Score=60.30 Aligned_cols=105 Identities=14% Similarity=0.184 Sum_probs=61.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcce-EEeeccEecCccccC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALN-VHANEFSFKESISTG 448 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~-I~aN~l~~~~g~~tG 448 (563)
+.+-||..++++.|+++| +.++|+|.- +. .++...+.. +..... .+|-.. -+++ .+
T Consensus 26 ~~~~~gv~e~l~~L~~~g---~~~~ivTNq-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~-p~~~--~~ 98 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMG---FALVVVTNQ-SGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHH-PQGS--VE 98 (182)
T ss_dssp CCBCTTHHHHHHHHHHTT---CEEEEEEEC-THHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCB-TTCS--SG
T ss_pred eeECCCHHHHHHHHhhcC---chhhhhhcc-chhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccc-cccc--cc
Confidence 467799999999999999 999999963 11 011111111 222221 122110 0111 11
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
.+...+.+.-=+...+...+++++.+ ..+++|||||.+|+.|...|+++
T Consensus 99 ~~~~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~ 147 (182)
T d2gmwa1 99 EFRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVG 147 (182)
T ss_dssp GGBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCS
T ss_pred cccccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCC
Confidence 11111112112235677777777763 57899999999999999999985
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=97.09 E-value=0.00011 Score=67.58 Aligned_cols=46 Identities=20% Similarity=0.225 Sum_probs=35.2
Q ss_pred CCCcHHHHHHHHH---HhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC
Q 008499 457 PIDKVQAFNNTLE---KYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 503 (563)
Q Consensus 457 g~~K~~~l~~~~~---~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~ 503 (563)
+.+|...++.+++ ..+.+ ...++++|||.||++||+.||+||++.+
T Consensus 182 ~~~K~~~~~~l~~~~~~l~i~-~~~~iafGD~~NDl~Ml~~a~~~vaV~n 230 (232)
T d1xvia_ 182 SAGKDQAANWIIATYQQLSGK-RPTTLGLGDGPNDAPLLEVMDYAVIVKG 230 (232)
T ss_dssp TCCHHHHHHHHHHHHHHHHSS-CCEEEEEESSGGGHHHHHTSSEEEECCC
T ss_pred CchHHHHHHHHHHHHHHcCCC-hhcEEEEcCCHhHHHHHHhCCeEEEEeC
Confidence 4467766666554 33443 4679999999999999999999999963
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.85 E-value=0.0013 Score=59.59 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
...+...+++.+.. +.++++|||+..|+.+.+.||+ .|.+.
T Consensus 162 p~~f~~~~~~lg~~-p~e~l~VgD~~~Dv~~A~~aG~~ti~v~ 203 (225)
T d2g80a1 162 TQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLAS 203 (225)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred hhHhHHHHHhcccC-chhceeecCCHHHHHHHHHcCCEEEEEe
Confidence 46777788887763 6899999999999999999998 55554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.28 E-value=0.0011 Score=60.38 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=34.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.|.+|...++.+... ..++++|||.||+.|+..++.|+.|+
T Consensus 156 ~g~~Kg~al~~l~~~------~~~i~~GDs~ND~~Mf~~~~~~~av~ 196 (229)
T d1u02a_ 156 PGVNKGSAIRSVRGE------RPAIIAGDDATDEAAFEANDDALTIK 196 (229)
T ss_dssp TTCCHHHHHHHHHTT------SCEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred CCCCHHHHHHHHhcc------ccceeecCCCChHHHHhccCCeEEEE
Confidence 466899999998752 57899999999999999997776664
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.21 E-value=0.0015 Score=59.57 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=40.2
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCc----CchHHhhhcC-ccEEEcCChhHHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV----GDLLCLLEAD-IGIVIGSSSSLRRVGS 512 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~----~Dl~~l~~Ad-~givi~~~~~L~~~~~ 512 (563)
.+.+|...++.+++. ....++++||+. ||++|+++|+ .|+++++.....+.|+
T Consensus 182 ~~vsKg~al~~L~~~----~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~ 239 (244)
T d2fuea1 182 EGWDKRYCLDSLDQD----SFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCR 239 (244)
T ss_dssp TTCSTTHHHHHHTTS----CCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHH
T ss_pred hhccHHHHHHHHhcC----ChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHH
Confidence 356799999988752 357899999975 9999999997 5999985544443443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.37 E-value=0.002 Score=58.80 Aligned_cols=54 Identities=15% Similarity=0.209 Sum_probs=38.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcC----CcCchHHhhhcC-ccEEEcCChhHHHHHHh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEAD-IGIVIGSSSSLRRVGSQ 513 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad-~givi~~~~~L~~~~~~ 513 (563)
.+.+|...++.++. . ...+++++|| |.||++|++.|+ .|+.+.+....++.|+.
T Consensus 182 ~~vsKg~al~~l~~---~-~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~~~~~ 240 (243)
T d2amya1 182 DGWDKRYCLRHVEN---D-GYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICEL 240 (243)
T ss_dssp TTCSGGGGGGGTTT---S-CCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHH
T ss_pred cccCHHHHHHHHhC---C-CcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHHHHHH
Confidence 45568777777653 2 3578999999 779999999998 47888766666666653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.49 E-value=0.14 Score=46.39 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=55.0
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEcccc--ChHhhHHHHhC--CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSS--GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gw--s~~~I~~~L~~--~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..-||+.+|++.++++| +.++.||+=. ..+....-|.+ |++... -+.+.+.++ -..-..|..
T Consensus 86 ~p~pga~~fl~~~~~~G---v~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~--~~~vll~~~---------~~~K~~rr~ 151 (209)
T d2b82a1 86 IPKEVARQLIDMHVRRG---DAIFFVTGRSPTKTETVSKTLADNFHIPATN--MNPVIFAGD---------KPGQNTKSQ 151 (209)
T ss_dssp EECHHHHHHHHHHHHHT---CEEEEEECSCCCSSCCHHHHHHHHTTCCTTT--BCCCEECCC---------CTTCCCSHH
T ss_pred CcchhHHHHHHHHHHcC---CeEEEEeCCchhhHHHHHHHHHHHcCCCccc--ccceEeeCC---------CCCchHHHH
Confidence 34589999999999999 9999999731 12222222322 332110 011112111 011234555
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
.+++ + .-++++||..+|+.....|++ ||-+
T Consensus 152 ~Ik~----y-----~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 152 WLQD----K-----NIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp HHHH----T-----TEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred HHHH----c-----CeEEEecCCHHHHhHHHHcCCCceEe
Confidence 5543 2 357899999999999999997 6555
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=91.88 E-value=0.14 Score=45.45 Aligned_cols=16 Identities=38% Similarity=0.439 Sum_probs=13.5
Q ss_pred CCeEEeeccccceecc
Q 008499 262 DRLIIFSDFDLTCTIV 277 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~ 277 (563)
++++|++|+||||+..
T Consensus 3 ~~~li~~DlDGTLl~~ 18 (232)
T d1xvia_ 3 QPLLVFSDLDGTLLDS 18 (232)
T ss_dssp CCEEEEEECTTTTSCS
T ss_pred CCEEEEEECCCCccCC
Confidence 5679999999999854
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.35 E-value=1.9 Score=38.06 Aligned_cols=25 Identities=8% Similarity=0.081 Sum_probs=22.1
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEcc
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSY 414 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~ 414 (563)
.+.||..+.++.+.++| +.++|||.
T Consensus 50 ~l~~~v~~~i~~L~~~g---y~iiIvTN 74 (195)
T d1yj5a1 50 ILYPEIPKKLQELAAEG---YKLVIFTN 74 (195)
T ss_dssp ESCTTHHHHHHHHHHHT---CEEEEEEE
T ss_pred eccCCHHHHHHHHHhCC---cEEEEecC
Confidence 35788899999999999 99999995
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.75 E-value=2.8 Score=36.21 Aligned_cols=31 Identities=13% Similarity=0.076 Sum_probs=24.0
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccc
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~g 415 (563)
.+.++.-||+.+.++.|.+.+ ...++|+|+.
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~--~~~v~i~t~~ 100 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQ--NTDVFICTSP 100 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHST--TEEEEEEECC
T ss_pred HhhCCcccCHHHHHHHHhhcc--CccceEEccc
Confidence 346788999999999999854 1467788864
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=82.39 E-value=0.65 Score=42.26 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
...++..++..+. .+.++++||||. +|+.++..||. .|.+.
T Consensus 179 p~~~~~a~~~lgi-~p~e~v~IGD~~~~DI~~a~~aG~~tilV~ 221 (250)
T d2c4na1 179 PWIIRAALNKMQA-HSEETVIVGDNLRTDILAGFQAGLETILVL 221 (250)
T ss_dssp THHHHHHHHHHTC-CGGGEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred hhhHhhhhhhhcC-CchheEEecCChHHHHHHHHHCCCCEEEEC
Confidence 4677888888777 468999999995 69999999998 56653
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=82.28 E-value=0.71 Score=41.99 Aligned_cols=42 Identities=17% Similarity=0.389 Sum_probs=33.4
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
+...+...++..+. .+.++++|||+. +|+.|+..||+ .|.+.
T Consensus 182 ~~~~~~~~~~~~gi-~~~~~l~IGD~~~~DI~~a~~aG~~si~V~ 225 (253)
T d1yv9a1 182 KAIIMERAIAHLGV-EKEQVIMVGDNYETDIQSGIQNGIDSLLVT 225 (253)
T ss_dssp SHHHHHHHHHHHCS-CGGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred chhHHHHHHHHhCC-CccceEEecCChHHHHHHHHHCCCCEEEEC
Confidence 45667788887776 358999999995 69999999998 56663
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=80.86 E-value=0.88 Score=41.40 Aligned_cols=43 Identities=21% Similarity=0.488 Sum_probs=34.8
Q ss_pred Cc--HHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 459 DK--VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 459 ~K--~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
+| ...++..++..+.+ +.++++|||+. +|+.+...||+ .|.+.
T Consensus 179 gKP~p~~~~~al~~l~i~-~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 179 GKPEAVIMNKALDRLGVK-RHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp STTSHHHHHHHHHHHTSC-GGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred ccCCcccceehhhhcccc-ccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 47 57788888887764 58999999996 59999999999 66664
|