Citrus Sinensis ID: 008551

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-
MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL
ccccccccccccHHHHcccccHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEcccccHHHcccccccHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEcccEEEEcccccccccccccEEEEEEccccccccccccccccccEEEEEEcccEEEEccccccEEEEEEcccEEEEEEEEEEEcccccEEEEEEEcHHccccccEEEEEEEEcccEEEEEEEEccEEEEEEEcccccEEEEccEEEEEEEEccccEEEEEEEcccccccEEEEEEEc
cccHHHccccccHHHHHccccHHHHHHHHHHHHHcccccEEEEEEccccEcccccccccHHHHcHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEHHHHccccccccccccHHHcccEEEccccccccccccccccHcHHHccccccccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEHcccccHHHccccccEEEEccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccccEEEcccccccccHHccccccccccEEEEEEEcccccEEEEEEEccccccccccccccccccccccEEEEEcHHHcccccccccccccccEEEEEEcccEEEEEcccccEEEEEccccEEEEEEEEEEEcccccEEEEEEHHHccccccEEEEEEEccccEEEEEEEEEEccEEEEEEcccccEEEEccEEEEEEEccccEEEEEEccccccccEEEEEEEEc
mpdmlnwfgwctwdafytdvtgeGVKQGLEsfekggippkfiiiddgwqsvgmdpsgfefradnTANFANRLTHIKENhkfqkngkegqreedpalGLRHIVTEIKEKHDLKYVYVWHAITgywggvrpgvtgmehyeskmqypvsspgvqsnepcdafDSIAknglglvnpekvFHFYDELHSYLASAGIDGVKVDVQNILETlgaghggrvkLSRKYHQALEASIARNfrnndiiccmshntdglysAKRSAVirasddfwprdpashtiHIASVAYNTIflgefmqpdwdmfhslhpmaeYHGAARAVGgcaiyvsdkpgqhdfnllrklvlpdgsilraklpgrptrdclfsdpardgkslLKIWnlndftgvvgvfncqgagwcrvgkknlihdeqpgtttgfirakdvdylprvagdewtgDAIAYshlggevaylpknatlpitlksreyeVYTVvpvkelssgtrfapiglvkmfnsggaikelryesegtatVDMKVrgcgefgayssarprriavdseevqfgyeeesglvtltlrvpkeelYLWNISFEL
MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIkenhkfqkngkegqreedpalGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETlgaghggrvkLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSilraklpgrptrdclFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLihdeqpgtttgfirakdVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVvpvkelssgtrfapiglVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFgayssarprriAVDSEEvqfgyeeesglvtltlrvpkeelylwnisfel
MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL
***MLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTH*********************LGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHY******************CDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISF**
*PDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKE****************PALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVA*L*KNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL
MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKF***********DPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL
MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL
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MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query561 2.2.26 [Sep-21-2011]
Q84VX0754 Probable galactinol--sucr yes no 0.998 0.742 0.759 0.0
Q94A08773 Probable galactinol--sucr no no 0.985 0.715 0.626 0.0
Q8RX87749 Probable galactinol--sucr no no 0.976 0.731 0.592 0.0
Q9FND9783 Probable galactinol--sucr no no 0.935 0.670 0.408 1e-121
Q8VWN6798 Galactinol--sucrose galac N/A no 0.939 0.660 0.415 1e-119
Q5VQG4783 Galactinol--sucrose galac no no 0.937 0.671 0.412 1e-115
Q93XK2853 Stachyose synthase OS=Pis N/A no 0.960 0.631 0.353 1e-102
Q9SYJ4876 Probable galactinol--sucr no no 0.770 0.493 0.395 7e-90
Q97U94648 Alpha-galactosidase OS=Su yes no 0.559 0.484 0.299 8e-32
>sp|Q84VX0|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1 Back     alignment and function desciption
 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/562 (75%), Positives = 487/562 (86%), Gaps = 2/562 (0%)

Query: 1   MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEF 60
           MPDMLNWFGWCTWDAFYT+VT + VKQGLES + GG+ PKF+IIDDGWQSVGMD +  EF
Sbjct: 193 MPDMLNWFGWCTWDAFYTNVTAKDVKQGLESLKAGGVTPKFVIIDDGWQSVGMDETSVEF 252

Query: 61  RADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAI 120
            ADN ANFANRLTHIKENHKFQK+GKEG R +DP+L L H++T+IK  + LKYVYVWHAI
Sbjct: 253 NADNAANFANRLTHIKENHKFQKDGKEGHRVDDPSLSLGHVITDIKSNNSLKYVYVWHAI 312

Query: 121 TGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYD 180
           TGYWGGV+PGV+GMEHYESK+ YPVSSPGV S+E C   +SI KNGLGLVNPEKVF FY+
Sbjct: 313 TGYWGGVKPGVSGMEHYESKVAYPVSSPGVMSSENCGCLESITKNGLGLVNPEKVFSFYN 372

Query: 181 ELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240
           +LHSYLAS G+DGVKVDVQNILETLGAGHGGRVKL++KYHQALEASI+RNF +N II CM
Sbjct: 373 DLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQALEASISRNFPDNGIISCM 432

Query: 241 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP 300
           SHNTDGLYSAK++AVIRASDDFWPRDPASHTIHIASVAYNT+FLGEFMQPDWDMFHSLHP
Sbjct: 433 SHNTDGLYSAKKTAVIRASDDFWPRDPASHTIHIASVAYNTLFLGEFMQPDWDMFHSLHP 492

Query: 301 MAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPAR 360
           MAEYH AARAVGGCAIYVSDKPGQHDFNLLRKLVL DGSILRAKLPGRPT DC FSDP R
Sbjct: 493 MAEYHAAARAVGGCAIYVSDKPGQHDFNLLRKLVLRDGSILRAKLPGRPTSDCFFSDPVR 552

Query: 361 DGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRV 420
           D KSLLKIWNLN+FTGV+GVFNCQGAGWC+  K+ LIHD++PGT +G +R  DV YL +V
Sbjct: 553 DNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPGTISGCVRTNDVHYLHKV 612

Query: 421 AGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLV 480
           A  EWTGD+I YSHL GE+ YLPK+ +LP+TL  REYEV+TVVPVKE S G++FAP+GL+
Sbjct: 613 AAFEWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVVPVKEFSDGSKFAPVGLM 672

Query: 481 KMFNSGGAIKELRYESEGTA-TVDMKVRGCGEFGAYSSA-RPRRIAVDSEEVQFGYEEES 538
           +MFNSGGAI  LRY+ EGT   V MK+RG G  G YSS  RPR + VDS++V++ YE ES
Sbjct: 673 EMFNSGGAIVSLRYDDEGTKFVVRMKLRGSGLVGVYSSVRRPRSVTVDSDDVEYRYEPES 732

Query: 539 GLVTLTLRVPKEELYLWNISFE 560
           GLVT TL VP++ELYLW++  +
Sbjct: 733 GLVTFTLGVPEKELYLWDVVIQ 754
Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 2
>sp|Q94A08|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2 Back     alignment and function description
>sp|Q8RX87|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2 Back     alignment and function description
>sp|Q9FND9|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1 Back     alignment and function description
>sp|Q8VWN6|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1 Back     alignment and function description
>sp|Q5VQG4|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1 Back     alignment and function description
>sp|Q93XK2|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SYJ4|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=3 Back     alignment and function description
>sp|Q97U94|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query561
224122300 754 predicted protein [Populus trichocarpa] 1.0 0.744 0.866 0.0
118487822 754 unknown [Populus trichocarpa] 1.0 0.744 0.866 0.0
255579562 758 Stachyose synthase precursor, putative [ 1.0 0.740 0.850 0.0
225462058 758 PREDICTED: probable galactinol--sucrose 1.0 0.740 0.837 0.0
356552396 755 PREDICTED: probable galactinol--sucrose 1.0 0.743 0.821 0.0
350536529 756 alkaline alpha-galactosidase seed imbibi 0.998 0.740 0.807 0.0
356501667 755 PREDICTED: probable galactinol--sucrose 1.0 0.743 0.812 0.0
357495237 760 Alkaline alpha galactosidase I [Medicago 1.0 0.738 0.807 0.0
29838629 754 alkaline alpha galactosidase I [Cucumis 0.996 0.741 0.786 0.0
449456639 828 PREDICTED: probable galactinol--sucrose 0.996 0.675 0.784 0.0
>gi|224122300|ref|XP_002330589.1| predicted protein [Populus trichocarpa] gi|222872147|gb|EEF09278.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1034 bits (2674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/561 (86%), Positives = 522/561 (93%)

Query: 1   MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEF 60
           MPDMLNWFGWCTWDAFYTDVT EGVKQGLESFEKGGIPPKF+IIDDGWQSVGMDP+G E 
Sbjct: 194 MPDMLNWFGWCTWDAFYTDVTAEGVKQGLESFEKGGIPPKFVIIDDGWQSVGMDPTGIET 253

Query: 61  RADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAI 120
            ADN+ANFANRLTHIKENHKFQKNGKEG R EDPALGL H VTEIKE+HDLKYVYVWHAI
Sbjct: 254 LADNSANFANRLTHIKENHKFQKNGKEGYRVEDPALGLTHTVTEIKERHDLKYVYVWHAI 313

Query: 121 TGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYD 180
           TGYWGGVRPG   MEHYE K+ YP+SSPGV+SNE CDAF SIA NGLGLVNPEKVF FYD
Sbjct: 314 TGYWGGVRPGGAEMEHYEPKLTYPISSPGVESNEHCDAFKSIATNGLGLVNPEKVFRFYD 373

Query: 181 ELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240
           ELH YL+SAGIDGVKVDVQNILETLGAGHGGRVKL+RKYHQALEASIARNFR+N II CM
Sbjct: 374 ELHHYLSSAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASIARNFRDNGIIYCM 433

Query: 241 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP 300
           SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP
Sbjct: 434 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP 493

Query: 301 MAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPAR 360
           MAEYHGAARAVGGCAIYVSDKPGQHDFNLL+KLVLPDGSILRAKLPGRPTRDCLFSDPAR
Sbjct: 494 MAEYHGAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPAR 553

Query: 361 DGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRV 420
           DGKSLLKIWNLNDF GV+GVFNCQGAGWCRVGK NLIHDE PGT TG +RAKDVDYLPRV
Sbjct: 554 DGKSLLKIWNLNDFNGVIGVFNCQGAGWCRVGKTNLIHDENPGTITGSVRAKDVDYLPRV 613

Query: 421 AGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLV 480
           A D WTGD++ YSH+GGEV YLPK+A +P+TLKSREYEV+TVVPVKEL++G +FAP+GLV
Sbjct: 614 ACDGWTGDSVLYSHVGGEVVYLPKDAGMPLTLKSREYEVFTVVPVKELANGVKFAPVGLV 673

Query: 481 KMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGL 540
           KMFNSGGAIKEL+Y+S  TATV MK RGCG FGAYSSA+P+RI+VDS+EV+FG+EE +GL
Sbjct: 674 KMFNSGGAIKELQYDSSTTATVSMKARGCGLFGAYSSAQPKRISVDSKEVEFGFEEGTGL 733

Query: 541 VTLTLRVPKEELYLWNISFEL 561
           VT+ LRVP+EELYLWNI+ EL
Sbjct: 734 VTIDLRVPEEELYLWNITVEL 754

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118487822|gb|ABK95734.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255579562|ref|XP_002530623.1| Stachyose synthase precursor, putative [Ricinus communis] gi|223529833|gb|EEF31766.1| Stachyose synthase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225462058|ref|XP_002275829.1| PREDICTED: probable galactinol--sucrose galactosyltransferase 1 [Vitis vinifera] gi|296089998|emb|CBI39817.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356552396|ref|XP_003544554.1| PREDICTED: probable galactinol--sucrose galactosyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|350536529|ref|NP_001234763.1| alkaline alpha-galactosidase seed imbibition protein [Solanum lycopersicum] gi|23452226|gb|AAN32954.1| alkaline alpha-galactosidase seed imbibition protein [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|356501667|ref|XP_003519645.1| PREDICTED: probable galactinol--sucrose galactosyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357495237|ref|XP_003617907.1| Alkaline alpha galactosidase I [Medicago truncatula] gi|355519242|gb|AET00866.1| Alkaline alpha galactosidase I [Medicago truncatula] Back     alignment and taxonomy information
>gi|29838629|gb|AAM75139.1| alkaline alpha galactosidase I [Cucumis melo] Back     alignment and taxonomy information
>gi|449456639|ref|XP_004146056.1| PREDICTED: probable galactinol--sucrose galactosyltransferase 1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query561
TAIR|locus:2020452754 SIP1 "AT1G55740" [Arabidopsis 0.992 0.738 0.763 1.4e-245
TAIR|locus:2103488773 SIP2 "AT3G57520" [Arabidopsis 0.869 0.631 0.670 3.8e-205
TAIR|locus:2170528783 SIP1 "AT5G40390" [Arabidopsis 0.942 0.675 0.417 2.5e-113
UNIPROTKB|Q5VQG4783 RFS "Galactinol--sucrose galac 0.934 0.669 0.415 2.4e-108
UNIPROTKB|Q93XK2853 STS1 "Stachyose synthase" [Pis 0.780 0.513 0.391 3.6e-101
TAIR|locus:2141425876 STS "AT4G01970" [Arabidopsis t 0.787 0.504 0.360 1.8e-93
ASPGD|ASPL0000010056863 aglF [Emericella nidulans (tax 0.696 0.453 0.291 1.3e-39
UNIPROTKB|G4NBB7908 MGG_11554 "Seed imbibition pro 0.524 0.323 0.309 4.1e-35
UNIPROTKB|Q97U94648 galS "Alpha-galactosidase" [Su 0.338 0.293 0.336 1.6e-23
UNIPROTKB|Q8A170693 BT_3797 "Possible alpha-galact 0.338 0.274 0.274 5.2e-20
TAIR|locus:2020452 SIP1 "AT1G55740" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2366 (837.9 bits), Expect = 1.4e-245, P = 1.4e-245
 Identities = 427/559 (76%), Positives = 486/559 (86%)

Query:     1 MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEF 60
             MPDMLNWFGWCTWDAFYT+VT + VKQGLES + GG+ PKF+IIDDGWQSVGMD +  EF
Sbjct:   193 MPDMLNWFGWCTWDAFYTNVTAKDVKQGLESLKAGGVTPKFVIIDDGWQSVGMDETSVEF 252

Query:    61 RADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAI 120
              ADN ANFANRLTHIKENHKFQK+GKEG R +DP+L L H++T+IK  + LKYVYVWHAI
Sbjct:   253 NADNAANFANRLTHIKENHKFQKDGKEGHRVDDPSLSLGHVITDIKSNNSLKYVYVWHAI 312

Query:   121 TGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYD 180
             TGYWGGV+PGV+GMEHYESK+ YPVSSPGV S+E C   +SI KNGLGLVNPEKVF FY+
Sbjct:   313 TGYWGGVKPGVSGMEHYESKVAYPVSSPGVMSSENCGCLESITKNGLGLVNPEKVFSFYN 372

Query:   181 ELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240
             +LHSYLAS G+DGVKVDVQNILETLGAGHGGRVKL++KYHQALEASI+RNF +N II CM
Sbjct:   373 DLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQALEASISRNFPDNGIISCM 432

Query:   241 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP 300
             SHNTDGLYSAK++AVIRASDDFWPRDPASHTIHIASVAYNT+FLGEFMQPDWDMFHSLHP
Sbjct:   433 SHNTDGLYSAKKTAVIRASDDFWPRDPASHTIHIASVAYNTLFLGEFMQPDWDMFHSLHP 492

Query:   301 MAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPAR 360
             MAEYH AARAVGGCAIYVSDKPGQHDFNLLRKLVL DGSILRAKLPGRPT DC FSDP R
Sbjct:   493 MAEYHAAARAVGGCAIYVSDKPGQHDFNLLRKLVLRDGSILRAKLPGRPTSDCFFSDPVR 552

Query:   361 DGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRV 420
             D KSLLKIWNLN+FTGV+GVFNCQGAGWC+  K+ LIHD++PGT +G +R  DV YL +V
Sbjct:   553 DNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPGTISGCVRTNDVHYLHKV 612

Query:   421 AGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLV 480
             A  EWTGD+I YSHL GE+ YLPK+ +LP+TL  REYEV+TVVPVKE S G++FAP+GL+
Sbjct:   613 AAFEWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVVPVKEFSDGSKFAPVGLM 672

Query:   481 KMFNSGGAIKELRYESEGTA-TVDMKVRGCGEFGAYSSAR-PRRIAVDSEEVQFGYEEES 538
             +MFNSGGAI  LRY+ EGT   V MK+RG G  G YSS R PR + VDS++V++ YE ES
Sbjct:   673 EMFNSGGAIVSLRYDDEGTKFVVRMKLRGSGLVGVYSSVRRPRSVTVDSDDVEYRYEPES 732

Query:   539 GLVTLTLRVPKEELYLWNI 557
             GLVT TL VP++ELYLW++
Sbjct:   733 GLVTFTLGVPEKELYLWDV 751
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
TAIR|locus:2103488 SIP2 "AT3G57520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170528 SIP1 "AT5G40390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5VQG4 RFS "Galactinol--sucrose galactosyltransferase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q93XK2 STS1 "Stachyose synthase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2141425 STS "AT4G01970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000010056 aglF [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NBB7 MGG_11554 "Seed imbibition protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q97U94 galS "Alpha-galactosidase" [Sulfolobus solfataricus P2 (taxid:273057)] Back     alignment and assigned GO terms
UNIPROTKB|Q8A170 BT_3797 "Possible alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84VX0RFS1_ARATH2, ., 4, ., 1, ., 8, 20.75970.99820.7427yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query561
PLN02355758 PLN02355, PLN02355, probable galactinol--sucrose g 0.0
PLN02219775 PLN02219, PLN02219, probable galactinol--sucrose g 0.0
pfam05691742 pfam05691, Raffinose_syn, Raffinose synthase or se 0.0
PLN02684750 PLN02684, PLN02684, Probable galactinol--sucrose g 0.0
PLN02711777 PLN02711, PLN02711, Probable galactinol--sucrose g 1e-171
PLN02982865 PLN02982, PLN02982, galactinol-raffinose galactosy 1e-134
PLN02982865 PLN02982, PLN02982, galactinol-raffinose galactosy 5e-20
COG3345687 COG3345, GalA, Alpha-galactosidase [Carbohydrate t 0.004
>gnl|CDD|215203 PLN02355, PLN02355, probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information 
 Score = 1179 bits (3051), Expect = 0.0
 Identities = 489/561 (87%), Positives = 521/561 (92%)

Query: 1   MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEF 60
           MPDMLNWFGWCTWDAFYT+VT EGVKQGLES EKGG+ PKF+IIDDGWQSVGMDP+G E 
Sbjct: 198 MPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKFVIIDDGWQSVGMDPTGIEC 257

Query: 61  RADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAI 120
            ADN+ANFANRLTHIKENHKFQKNGKEG R +DPALGL HIVTEIKEKH LKYVYVWHAI
Sbjct: 258 LADNSANFANRLTHIKENHKFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYVWHAI 317

Query: 121 TGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYD 180
           TGYWGGV+PGV GMEHYESKM YPVSSPGVQSNEPCDA +SI  NGLGLVNPEKVF FY+
Sbjct: 318 TGYWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALESITTNGLGLVNPEKVFSFYN 377

Query: 181 ELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM 240
           ELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKL+RKYHQALEASIARNF +N II CM
Sbjct: 378 ELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASIARNFPDNGIISCM 437

Query: 241 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP 300
           SHNTDGLYSAKR+AVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP
Sbjct: 438 SHNTDGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP 497

Query: 301 MAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPAR 360
           MAEYH AARAVGGCAIYVSDKPGQHDFNLL+KLVLPDGSILRAKLPGRPTRDCLFSDPAR
Sbjct: 498 MAEYHAAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPAR 557

Query: 361 DGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRV 420
           DGKSLLKIWNLN+FTGV+GVFNCQGAGWCRVGKKNLIHDEQPGT TG IRAKDVDYLP+V
Sbjct: 558 DGKSLLKIWNLNEFTGVIGVFNCQGAGWCRVGKKNLIHDEQPGTITGVIRAKDVDYLPKV 617

Query: 421 AGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLV 480
           A DEWTGD+I YSHLGGEV YLPK+A+LP+TLKSREYEV+TVVPVKELS+G +FAPIGLV
Sbjct: 618 ADDEWTGDSIVYSHLGGEVVYLPKDASLPVTLKSREYEVFTVVPVKELSNGVKFAPIGLV 677

Query: 481 KMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGL 540
           KMFNSGGAIKELRY+ +  ATV MKVRG G  GAYSS+RPRR+ VDS+EV+F YEE SGL
Sbjct: 678 KMFNSGGAIKELRYDEDTNATVRMKVRGSGLVGAYSSSRPRRVTVDSKEVEFRYEEGSGL 737

Query: 541 VTLTLRVPKEELYLWNISFEL 561
           VT  L VP+EELYLWN++ EL
Sbjct: 738 VTFDLGVPEEELYLWNVTVEL 758

Length = 758
>gnl|CDD|165863 PLN02219, PLN02219, probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>gnl|CDD|218695 pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1 Back     alignment and domain information
>gnl|CDD|166325 PLN02684, PLN02684, Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>gnl|CDD|215381 PLN02711, PLN02711, Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>gnl|CDD|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>gnl|CDD|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>gnl|CDD|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 561
PLN02219775 probable galactinol--sucrose galactosyltransferase 100.0
PLN02355758 probable galactinol--sucrose galactosyltransferase 100.0
PLN02684750 Probable galactinol--sucrose galactosyltransferase 100.0
PLN02982865 galactinol-raffinose galactosyltransferase/ghydrol 100.0
PLN02711777 Probable galactinol--sucrose galactosyltransferase 100.0
PF05691747 Raffinose_syn: Raffinose synthase or seed imbibiti 100.0
PLN02229427 alpha-galactosidase 100.0
PLN02692412 alpha-galactosidase 100.0
PLN02808386 alpha-galactosidase 100.0
PLN03231357 putative alpha-galactosidase; Provisional 100.0
PLN02899633 alpha-galactosidase 100.0
KOG2366414 consensus Alpha-D-galactosidase (melibiase) [Carbo 100.0
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 99.91
COG3345687 GalA Alpha-galactosidase [Carbohydrate transport a 99.77
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 99.52
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 99.3
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 98.86
cd06595292 GH31_xylosidase_XylS-like This family represents a 98.79
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 98.74
PRK10658665 putative alpha-glucosidase; Provisional 98.73
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 98.68
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 98.6
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 98.6
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 98.6
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 98.58
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 98.48
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 98.44
cd06600317 GH31_MGAM-like This family includes the following 98.39
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 98.31
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 98.26
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 98.19
PRK10426635 alpha-glucosidase; Provisional 98.17
COG1501772 Alpha-glucosidases, family 31 of glycosyl hydrolas 97.86
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 97.78
KOG1065805 consensus Maltase glucoamylase and related hydrola 95.64
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 91.37
PF13200316 DUF4015: Putative glycosyl hydrolase domain 88.52
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 86.64
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 80.9
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 80.62
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information 
Probab=100.00  E-value=4.3e-160  Score=1302.50  Aligned_cols=557  Identities=65%  Similarity=1.182  Sum_probs=536.1

Q ss_pred             CCCcCCCccccchhhhccCCCHHHHHHHHHHHHhCCCCCcEEEEeCCcccCCCCCCCCcccccccccccccccCcccCcc
Q 008551            1 MPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHK   80 (561)
Q Consensus         1 ~p~~~~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~K   80 (561)
                      +|+++|+|||||||+||++|||++|+++++.|+++|+|++|||||||||+.++++++.+....++.||.+||++|++|+|
T Consensus       194 ~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDDGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~K  273 (775)
T PLN02219        194 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGWQQIENKEKDENCVVQEGAQFATRLTGIKENAK  273 (775)
T ss_pred             CccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEccCccccccccccccccccccchhhhhhcccccccc
Confidence            58999999999999999999999999999999999999999999999999988766556677889999999999999999


Q ss_pred             cCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCcccc
Q 008551           81 FQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFD  160 (561)
Q Consensus        81 FP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~  160 (561)
                      |++.+    ....+|.|||++|+.||+++|||||||||||+||||||+|+++++++|++++++|..+||..+++|+++++
T Consensus       274 F~~~~----~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d  349 (775)
T PLN02219        274 FQKND----QKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPAAAGMEHYDSALAYPVQSPGVLGNQPDIVMD  349 (775)
T ss_pred             ccccc----cccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCCCcccccccccccccccCCCccccCcchhhh
Confidence            98621    12367889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeec
Q 008551          161 SIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCM  240 (561)
Q Consensus       161 ~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~ii~cm  240 (561)
                      .+..+|+++++|+++++||++||+||+++||||||||+|+.+++++.++++|++++++|++||++|++|||+++++|+||
T Consensus       350 ~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~ggrv~la~~y~~ALe~S~~r~F~~ng~I~CM  429 (775)
T PLN02219        350 SLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYQQALEASIARNFTDNGCISCM  429 (775)
T ss_pred             hhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEec
Confidence            99999999999999999999999999999999999999999999998999999999999999999999999999999999


Q ss_pred             cCCCCCCccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccChhHHHHHHHHHhcCCceEecC
Q 008551          241 SHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSD  320 (561)
Q Consensus       241 s~~~~~l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~~~a~~Haa~raisggPlyisD  320 (561)
                      ||+++++|+.++++++|+||||||++|++|++|+++|||||||+|+++|||||||||.||+|+|||++||||||||||||
T Consensus       430 sh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v~PDWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD  509 (775)
T PLN02219        430 CHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSD  509 (775)
T ss_pred             ccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhccccccCchhceecCccHHHHHHHHhhcCCcEEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHhhhcCCCCcEEeeCCCCCCCccccccCCCCCCcceEEEEeecCCceeEEEEeecCCcceeccccccccCC
Q 008551          321 KPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDE  400 (561)
Q Consensus       321 ~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d~lf~d~~~~~~~~lkv~~~~~~~~vvg~FN~~~~~w~~~~~~~~~~~~  400 (561)
                      +||+||++|||+|++|||+||||+.||+|||||||.||++|++++|||||.|+++||||+|||||++||++++++.+|+.
T Consensus       510 ~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLKIwn~n~~~gviG~FNcqGagW~~~~~~~~~~~~  589 (775)
T PLN02219        510 KPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKIWNVNKCTGVVGVFNCQGAGWCKIEKKTRIHDT  589 (775)
T ss_pred             CCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEEEEEcccccceEEEEeccCCCCCchhhccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEeeeeccCCCCccccCCCCCCCcEEEEEecCCeEEecCCCCeeeEEecCCceEEEEEEeeeecCCCceEeeehhh
Q 008551          401 QPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLV  480 (561)
Q Consensus       401 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~vv~~~~~g~~~~l~~~~~~~v~L~~~~~ei~~~~Pv~~~~~~~~~A~lGL~  480 (561)
                      +|.++|+.|+++|++++.++++.+|+++++||+|++|+++++++++.++|+|++++|||||++||+.+..+++||||||+
T Consensus       590 ~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~~~~vtL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~  669 (775)
T PLN02219        590 SPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPVTLKVLEYELFHFCPLKEIATNISFAPIGLL  669 (775)
T ss_pred             CCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCCceEEEecCCcEEEEEEeeEEEecCCcEEEecchh
Confidence            99999999999999999998988999999999999999999998999999999999999999999999989999999999


Q ss_pred             hhhcCccceeEEEEee---c----------------------CceEEEEEEeecceeeEEecCCCceEEeCCeeeeeEEe
Q 008551          481 KMFNSGGAIKELRYES---E----------------------GTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYE  535 (561)
Q Consensus       481 ~k~~~~aAV~~~~~~~---~----------------------~~~~v~v~lkg~G~~g~Y~s~~P~~~~v~g~~~~f~y~  535 (561)
                      +|||++|||+++++..   +                      .+..|.|+|||||+||+|||++|++|.|||++++|+|+
T Consensus       670 ~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~  749 (775)
T PLN02219        670 DMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTATIALSVRGCGRFGAYSSQRPLKCAVGSTETDFTYD  749 (775)
T ss_pred             hcccCceeeEEeEeecccccccccccccccccccccccccCCCCceEEEEEEcccceeeEecCCCeEEEECCEEeeeEEc
Confidence            9999999999999851   0                      13469999999999999999999999999999999999


Q ss_pred             cCceEEEEEeccCcccceeeeEEEEC
Q 008551          536 EESGLVTLTLRVPKEELYLWNISFEL  561 (561)
Q Consensus       536 ~~~gl~~v~~~~~~~~~~~~~v~~~~  561 (561)
                      +++||++|+||+|++++++|.|+|++
T Consensus       750 ~~sg~~~~~l~~~~~~~~~~~v~~~~  775 (775)
T PLN02219        750 AEVGLLTLTLPVTEEEMYRWHVEIQV  775 (775)
T ss_pred             CCCCeEEEEccCCcccCceeeEEEeC
Confidence            99999999999999999999999985

>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>PLN02229 alpha-galactosidase Back     alignment and domain information
>PLN02692 alpha-galactosidase Back     alignment and domain information
>PLN02808 alpha-galactosidase Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query561
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 2e-07
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 1e-06
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 2e-06
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 8e-06
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 3e-05
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 4e-05
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 5e-05
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 9e-05
3a21_A614 Putative secreted alpha-galactosidase; beta-alpha- 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720 Back     alignment and structure
 Score = 52.8 bits (126), Expect = 2e-07
 Identities = 46/290 (15%), Positives = 88/290 (30%), Gaps = 52/290 (17%)

Query: 9   GWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANF 68
              +W+A Y D TG+ +    +     GI    +++DDGW         F  R D+ ++ 
Sbjct: 332 LINSWEAAYFDFTGDTIVDLAKEAASLGI--DMVVMDDGW---------FGKRNDDNSSL 380

Query: 69  ANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVR 128
            +   +     K                 L  ++T +  +  +K+        G W    
Sbjct: 381 GDWQVN---ETKLGG-------------SLAELITRVH-EQGMKF--------GIWIEPE 415

Query: 129 PGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLAS 188
                 + Y +   + +   G +     +         L     E     +D++   L  
Sbjct: 416 MINEDSDLYRAHPDWAIRIQGKKPVRSRNQL------LLDFSRKEVRDCVFDQICVVLDQ 469

Query: 189 AGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIAR---NFRNNDIICCMSHNTD 245
             ID VK D+   +  + AG+     LS  Y   +   + R    + +  +  C      
Sbjct: 470 GKIDYVKWDMNRSMADVYAGN-----LSYDYVLGVYDFMERLCSRYPDLLLEGCSGGGGR 524

Query: 246 GLYS-AKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDM 294
                   S  I  SD+    +         S  Y    +G  +    + 
Sbjct: 525 FDAGMLYYSPQIWCSDNTDAINRTRIQYG-TSFFYPVSAMGAHVSAVPNH 573
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745 Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397 Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query561
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 100.0
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 100.0
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 100.0
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 100.0
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 100.0
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 100.0
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 100.0
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 100.0
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 100.0
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 99.95
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 99.9
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 99.89
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 99.84
2f2h_A773 Putative family 31 glucosidase YICI; BETA8alpha8 b 99.23
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 99.04
4ba0_A817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 98.87
2g3m_A693 Maltase, alpha-glucosidase; hydrolase, glycoside h 98.8
2xvl_A1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 98.59
3lpp_A898 Sucrase-isomaltase; glycoside hydrolase family 31, 98.47
3nsx_A666 Alpha-glucosidase; structural genomics, PSI-2, pro 98.45
3l4y_A875 Maltase-glucoamylase, intestinal; glycoside hydrol 98.4
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 98.35
3top_A908 Maltase-glucoamylase, intestinal; membrane, hydrol 97.32
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 96.32
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 90.78
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 86.96
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 86.86
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 85.46
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 85.38
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 85.25
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 84.51
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 83.47
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 83.15
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
Probab=100.00  E-value=6.3e-49  Score=423.30  Aligned_cols=387  Identities=18%  Similarity=0.208  Sum_probs=261.1

Q ss_pred             CCCccccchhhhccCCCHHHHHHHHHHH----HhCCCCCcEEEEeCCcccCCCCCCCCc-ccccccccccccccCcccC-
Q 008551            5 LNWFGWCTWDAFYTDVTGEGVKQGLESF----EKGGIPPKFIIIDDGWQSVGMDPSGFE-FRADNTANFANRLTHIKEN-   78 (561)
Q Consensus         5 ~~~~GWcTW~a~~~~vte~~i~~~~~~L----~~~Gi~~~~viIDDGWQ~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~-   78 (561)
                      ..+||||||++|+++|||++|++.++.|    ++.|+.  ||+||||||..+++..+-. ......    ..+++|.++ 
T Consensus        11 ~pp~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~~--~~~iDDgW~~~~~~~~~y~~~~~~~~----d~~G~~~~~~   84 (433)
T 3cc1_A           11 TPPMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWE--YIVVDIQWYEPTANSSAYNPFAPLCM----DEYGRLLPAT   84 (433)
T ss_dssp             CCCEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTCC--EEEECSCTTCCCTTSTTCCTTSCSCB----CTTSCBCCCT
T ss_pred             CCCEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCCe--EEEECCCcCCCCCccccccccccccc----CCCCCEeECC
Confidence            4579999999999999999999999999    555555  9999999998754321000 000000    135677775 


Q ss_pred             cccCCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcc-ccccccc-ccCCCCCCCCCCCC
Q 008551           79 HKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGME-HYESKMQ-YPVSSPGVQSNEPC  156 (561)
Q Consensus        79 ~KFP~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~-~y~~~~~-~~~~~~g~~~~~pd  156 (561)
                      +|||++.+        +.|||+++++||+ +|+| +|||+.+.-.+..+.|+++... .|..+-+ .+..          
T Consensus        85 ~kFP~~~~--------~~Gl~~l~~~ih~-~Glk-~Giw~~p~i~~~~v~~~s~~~~~~~~~~di~~~~~----------  144 (433)
T 3cc1_A           85 NRFPSAKN--------GAGFKPLSDAIHD-LGLK-FGIHIMRGIPRQAVYENSPVLGSTKTAREIAHTNS----------  144 (433)
T ss_dssp             TTCGGGTT--------TTTTHHHHHHHHH-TTCE-EEEEEESSEEHHHHHHTCBCTTSSCBHHHHEETTC----------
T ss_pred             ccCCCccc--------CCCHHHHHHHHHH-cCCe-eEEEeCCCCchhccCCCCccccccceecccccCCc----------
Confidence            69996211        3499999999999 6999 7999865211112344443311 0110000 0000          


Q ss_pred             cc-ccccccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCc
Q 008551          157 DA-FDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNND  235 (561)
Q Consensus       157 ~~-~~~~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~~~~~~~~~~~~y~~Al~~s~~~~f~g~~  235 (561)
                      .| +.. ...++++. .+++++||+.++++|++|||||||+|+|+.. .+. ++  ..+..++|++||+++      +++
T Consensus       145 ~~~~~~-~~~~lD~~-~p~~~~~~~~~~~~l~~~GvDyvK~D~~~~~-~~~-~~--~~~~~~~~~~aL~~~------gr~  212 (433)
T 3cc1_A          145 ICPWNT-DMYGVDPT-KEGAQSYYNSLFELYAQWGVDFVKVDDIAAS-RLY-DT--HLEEIKMIQRAIQAC------GRP  212 (433)
T ss_dssp             CBTTBT-TEEEECTT-STTHHHHHHHHHHHHHHTTCCEEEEESCSCT-TSS-CC--CHHHHHHHHHHHHHS------SSC
T ss_pred             ccCCCC-CceeecCC-CHHHHHHHHHHHHHHHHcCCCEEEeCCcccc-cCC-cc--cHHHHHHHHHHHHhc------CCC
Confidence            00 000 00112223 3569999999999999999999999999752 221 11  345667788887654      789


Q ss_pred             eEeeccCCCCC----CccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccC------------
Q 008551          236 IICCMSHNTDG----LYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLH------------  299 (561)
Q Consensus       236 ii~cms~~~~~----l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~------------  299 (561)
                      |++|+|+++..    .+..+++|+||+|+|++|.|+...+. +..+++.+.++++++|||+|||+++|            
T Consensus       213 i~~slc~g~~~~~~~~~~~~~~n~wR~s~D~~~~w~~~~~~-~~~~~~~~~~~~~g~~nD~Dml~vg~~g~~~~~~~~~~  291 (433)
T 3cc1_A          213 MVLSLSPGPAPIKYAHHFKTNANMWRITDDFWDDWSLLYQM-FERCEVWEKHIGTGHWPDCGMLPLGHIGIRSVDGPGGD  291 (433)
T ss_dssp             CEEECCCSBSSEESCSSSCCTTGGGCCEECCCSCHHHHHHH-HHHHHHHHHSCCCSCCCBCCCBCCSEECTTCSSSSSSS
T ss_pred             EEEEecCCCCChhhhhhhhhhCcEEEeccCccccHHHHHHH-HHHHHHHHhhcCCCccCChHHhcccCcccccccccccc
Confidence            99999986322    24567899999999999999875432 22234566677889999999999874            


Q ss_pred             -------hhHHHHHHHHHhcCCceEecCCCCCCCHHHHhhhcCCCCcEEeeCCCCCCCccccccCCCCCCcceEEEEeec
Q 008551          300 -------PMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLN  372 (561)
Q Consensus       300 -------~~a~~Haa~raisggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~~g~p~~d~lf~d~~~~~~~~lkv~~~~  372 (561)
                             .+.++|+++|||+++||++||.+.+.+-+.++-|  .+.+|++.++.|++.+. ++.    ++.  +.||...
T Consensus       292 ~~~~lt~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL--~N~eviavnqdg~~~~~-v~~----~~~--~~vw~~~  362 (433)
T 3cc1_A          292 RWTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLL--TNEGILSINQKSVLNRF-VYR----EED--KVAWAAN  362 (433)
T ss_dssp             EECSSCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHH--CCHHHHHHHHHCEEEEE-EEE----ETT--EEEEEEE
T ss_pred             ccCCCCHHHHHHHHHHHHHhcCceEecCccccCCHHHHHHh--cChhheeecCCCcCcee-eEe----cCC--cEEEEEE
Confidence                   4578899999999999999999887765544433  34556666555544431 211    122  7788764


Q ss_pred             --CCceeEEEEeecCCcceeccccccccCCCCCceEeeeeccCCCCccccCCCCCCCcEEEEEecCCeEE-ecCCCCeee
Q 008551          373 --DFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVA-YLPKNATLP  449 (561)
Q Consensus       373 --~~~~vvg~FN~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~vv~~~~~g~~~-~l~~~~~~~  449 (561)
                        .+..+|++||.++..                 .+.++++++++.         .+.|.|++.++++.. ....+..++
T Consensus       363 l~~g~~~val~N~~~~~-----------------~~~~~~~~~lgl---------~~~~~v~Dlw~~~~~g~~~~~~~~~  416 (433)
T 3cc1_A          363 GRNGEAYVALFNLHDQQ-----------------KTLQFRLDMVGI---------METVQLFNVWDRSFLQSLAPSESFQ  416 (433)
T ss_dssp             CSSSCEEEEEEECSSSC-----------------EEEEECGGGTTC---------CSCEEEEETTTTEEEEEECTTCCEE
T ss_pred             CCCCCEEEEEEeCCCCC-----------------EEEEEEHHHcCC---------CCceEEEECCCCCccccccCCceEE
Confidence              456789999976532                 233366777652         347899999999853 222233899


Q ss_pred             EEecCCceEEEEEEee
Q 008551          450 ITLKSREYEVYTVVPV  465 (561)
Q Consensus       450 v~L~~~~~ei~~~~Pv  465 (561)
                      ++|+++++.+|.+.|.
T Consensus       417 ~~v~~hg~~l~~l~~~  432 (433)
T 3cc1_A          417 IELKPHQSMMLKLSPD  432 (433)
T ss_dssp             EEECTTCEEEEEEEEC
T ss_pred             EEECCCcEEEEEEEeC
Confidence            9999999999999885
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 561
d1szna2314 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T 8e-20
d1zy9a2348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 1e-15
d1uasa2273 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ 2e-07
d1r46a2292 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) 2e-06
d1ktba2293 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu 1e-04
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

 Score = 88.0 bits (217), Expect = 8e-20
 Identities = 52/334 (15%), Positives = 91/334 (27%), Gaps = 67/334 (20%)

Query: 8   FGWCTWDAFYTDVTGEGVKQGLESFEKGGIPP---KFIIIDDGWQSVGMDPSGFEFRADN 64
            GW +W+A++ D+         E     G+      ++ IDD W        G       
Sbjct: 14  LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDG------- 66

Query: 65  TANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYW 124
                    HI  N     +G +G  ++  ALGL               + ++       
Sbjct: 67  ---------HIAPNATRFPDGIDGLAKKVHALGL--------------KLGIYSTAGTAT 103

Query: 125 GGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHS 184
               P   G E                     DA    A  G+  +  +   +   +   
Sbjct: 104 CAGYPASLGYEDV-------------------DAA-DFADWGVDYLKYD-NCNVPSDWQD 142

Query: 185 YLASAGIDGVKVDVQNILETLG------AGHGGRVKLSRKYHQALEASIARNFRNNDIIC 238
              +   D VK        T         G+      S +   A+  ++A+      +  
Sbjct: 143 EYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVLSM 202

Query: 239 CMSHNTDGLYSAKRSA-VIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFH- 296
           C+    D       +    R SDD  P   +   I +   ++    +  +   D DM   
Sbjct: 203 CIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRI-LNLNSFKLNSVDFWGHNDADMLEV 261

Query: 297 ---SLHPMAEY-HGAARAVGGCAIYVSDKPGQHD 326
              +L       H A  A     + +     Q  
Sbjct: 262 GNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLS 295
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query561
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 100.0
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 100.0
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 100.0
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 100.0
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 99.28
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 97.04
d1ktba195 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 96.24
d1szna1103 Melibiase {Trichoderma reesei [TaxId: 51453]} 95.84
d1r46a198 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 93.33
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 91.74
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 90.8
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 86.67
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 85.24
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 82.59
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 80.86
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=8.7e-41  Score=341.08  Aligned_cols=285  Identities=17%  Similarity=0.200  Sum_probs=202.3

Q ss_pred             CCccccchhhhccCCCHHHHHHHHHHHHhCCCC---CcEEEEeCCcccCCCCCCCCcccccccccccccccCcccC-ccc
Q 008551            6 NWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIP---PKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKF   81 (561)
Q Consensus         6 ~~~GWcTW~a~~~~vte~~i~~~~~~L~~~Gi~---~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~KF   81 (561)
                      .+||||||++|+++|||++|++.++.|+++|++   +++|+||||||..+++                .+++|.++ +||
T Consensus        12 Pp~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~----------------~~G~~~~d~~kF   75 (314)
T d1szna2          12 PSLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGR----------------VDGHIAPNATRF   75 (314)
T ss_dssp             CCEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCC----------------BTTBCCBCTTTC
T ss_pred             CCCcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCC----------------CCCCeeeCHhhc
Confidence            359999999999999999999999999988753   5799999999987654                23456664 799


Q ss_pred             CCCCCCCCCCCCCccCHHHHHHHHHHhcCCcEEEEEeeeccccCCcCCCCCCcccccccccccCCCCCCCCCCCCccccc
Q 008551           82 QKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDS  161 (561)
Q Consensus        82 P~~~~~~~~~~~~~~Glk~lv~~i~~~~Glk~vgvWhal~GyW~GI~p~~~~~~~y~~~~~~~~~~~g~~~~~pd~~~~~  161 (561)
                      |+             |||+++++||+ +|+| +|+|+++.+.|..-+|++..   +......                 .
T Consensus        76 P~-------------Gl~~~~~~i~~-~G~k-~Giw~~p~~~~~~~~p~~~~---~~~~~~~-----------------~  120 (314)
T d1szna2          76 PD-------------GIDGLAKKVHA-LGLK-LGIYSTAGTATCAGYPASLG---YEDVDAA-----------------D  120 (314)
T ss_dssp             TT-------------HHHHHHHHHHH-TTCE-EEEEEESSSBCTTSCBCCTT---CHHHHHH-----------------H
T ss_pred             CC-------------chHHHHHHHHh-cCCe-EEEeecccccccCCCccccc---ccccchh-----------------h
Confidence            96             99999999999 6999 79999998888776666532   1111000                 0


Q ss_pred             cccCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEccccchhhccC------CCCChhhHHHHHHHHHHHHHHhhCCCCc
Q 008551          162 IAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGA------GHGGRVKLSRKYHQALEASIARNFRNND  235 (561)
Q Consensus       162 ~~~~g~g~~~p~~a~~fy~~~~~~la~~GVD~vKvD~q~~~~~l~~------~~~~~~~~~~~y~~Al~~s~~~~f~g~~  235 (561)
                      ....++++.. ++++.+++.+.+.++++||||+|+|.+........      ..............+|..++++.+++.-
T Consensus       121 ~~~~~~d~~~-~d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  199 (314)
T d1szna2         121 FADWGVDYLK-YDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIV  199 (314)
T ss_dssp             HHHTTCCEEE-EECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSCCE
T ss_pred             hhhcCCcccc-chHHHHHHHHHHHHHHhCCceEEecccccchhccCcccCccccCcchhhHHHHHHHHHHHHHHhCCCeE
Confidence            0011222222 34566777777788999999999998765432211      1111122233344456666777766555


Q ss_pred             eEeeccCCCCC-CccccccCeEeecCCCCCCCccchhHHHHHHhhhhhhhcCCCCCCCccCcccC-----hhHHHHHHHH
Q 008551          236 IICCMSHNTDG-LYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLH-----PMAEYHGAAR  309 (561)
Q Consensus       236 ii~cms~~~~~-l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~~a~nsl~~~~~~~pD~DMf~s~~-----~~a~~Haa~r  309 (561)
                      +..|+++.... .+....++++|+|+|++|.|...++ ++..++++..+.++..|||+||+..++     .+.++|+++|
T Consensus       200 i~~c~~~~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~-~~~~~~~~~~~~~~~~~~DpDml~~g~~~lt~~e~r~~~sl~  278 (314)
T d1szna2         200 LSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTR-ILNLNSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALW  278 (314)
T ss_dssp             EEECCTTGGGHHHHGGGTCSEEECSSCCCSSHHHHHH-HHHHHHTCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHH
T ss_pred             EEecCCCCCCchhhhhhcccceeecCCcccccchHHH-HHHHHHHHHHHhcCCccCCchhcccCCCCCCHHHHHHHHHHH
Confidence            67777765432 2455788999999999999987654 567788888888889999999998765     3568999999


Q ss_pred             HhcCCceEecCCCCCCCHHHHhhhcCCCCcEEeeCC
Q 008551          310 AVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKL  345 (561)
Q Consensus       310 aisggPlyisD~pg~~d~~lL~~l~~~dg~vlr~~~  345 (561)
                      ||+||||++||.+.+.+-+-+.  ++++.++|+.+|
T Consensus       279 a~~~~pl~~g~dl~~~~~~~~~--ll~N~e~ia~nq  312 (314)
T d1szna2         279 AAMKSPLLIGTDLAQLSQNNIN--LLKNKHLLAFNQ  312 (314)
T ss_dssp             HHTTCCEEECSCGGGCCHHHHH--HHTCHHHHHHHT
T ss_pred             HHHhCchhccCCcccCCHHHHH--HhcCHHHHhhcc
Confidence            9999999999987766544332  234444554433
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure