Citrus Sinensis ID: 008582
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 561 | 2.2.26 [Sep-21-2011] | |||||||
| Q39033 | 581 | Phosphoinositide phosphol | yes | no | 0.980 | 0.946 | 0.689 | 0.0 | |
| Q9LY51 | 584 | Phosphoinositide phosphol | no | no | 0.980 | 0.941 | 0.648 | 0.0 | |
| Q8GV43 | 613 | Phosphoinositide phosphol | no | no | 0.971 | 0.889 | 0.551 | 0.0 | |
| Q944C1 | 597 | Phosphoinositide phosphol | no | no | 0.978 | 0.919 | 0.539 | 1e-178 | |
| Q944C2 | 578 | Phosphoinositide phosphol | no | no | 0.953 | 0.925 | 0.513 | 1e-164 | |
| Q39032 | 561 | Phosphoinositide phosphol | no | no | 0.932 | 0.932 | 0.510 | 1e-163 | |
| Q56W08 | 564 | Phosphoinositide phosphol | no | no | 0.934 | 0.929 | 0.498 | 1e-155 | |
| Q9STZ3 | 531 | Phosphoinositide phosphol | no | no | 0.871 | 0.920 | 0.356 | 3e-89 | |
| Q6NMA7 | 531 | Phosphoinositide phosphol | no | no | 0.866 | 0.915 | 0.340 | 2e-79 | |
| Q8N3E9 | 789 | 1-phosphatidylinositol 4, | yes | no | 0.885 | 0.629 | 0.290 | 1e-55 |
| >sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/592 (68%), Positives = 468/592 (79%), Gaps = 42/592 (7%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRRF ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHKVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP SLKRRIIISTKPPKEY E K+ + Q+GK DEE WG+EVP+ N S
Sbjct: 235 SPNSLKRRIIISTKPPKEYKEGKDVEV----VQKGKDLGDEEVWGREVPSFIQRNKSEA- 289
Query: 300 KDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
KDD DG D+D++D +DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 290 KDDLDGNDDDDDDDDEDKSKINAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ----- 414
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQ
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRS 409
Query: 415 -------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 449
+G +++FDPK LP K TL+VTVYMGEGWY+DF
Sbjct: 410 LWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTVYMGEGWYFDFR 469
Query: 450 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 509
HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNWIP+W+E FEFPL+VPELALLR+E
Sbjct: 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLE 529
Query: 510 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
VHEYDMSEKDDFGGQTCLPV EL +GIRA PLH RKGE+YKSVKLL+ EF+
Sbjct: 530 VHEYDMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKGEKYKSVKLLVKVEFV 581
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. At physiological calcium concentration, the preferred substrate is phosphatidylinositol 4,5-bisphosphate versus phosphatidylinositol.phosphatidylinositol. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 1EC: 1 |
| >sp|Q9LY51|PLCD7_ARATH Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/595 (64%), Positives = 452/595 (75%), Gaps = 45/595 (7%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRR+ S AP +K++FD YS+ G MT D L RFLI+VQK+DKA+K
Sbjct: 1 MSKQTYKVCFCFRRRYRHTVSVAPAEIKTLFDNYSDKGLMTTDLLLRFLIDVQKQDKATK 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ I+++ L H R GL+L+AFFKYLF N PLS V H DM AP+SHYFI
Sbjct: 61 EEAQDIVNASSSLLH-----RNGLHLDAFFKYLFAVTNSPLSSLEV-HQDMDAPLSHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCS++PII AL+KGVRVIELDIWPNS +D +DVLHG T+T+PVEL
Sbjct: 115 YTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHGRTLTSPVEL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCLR+I+E+AF S+YPVV+TLEDHLTP LQAKVAEMVT GE+LFTP S ECLKEFP
Sbjct: 175 IKCLRAIREHAFDVSDYPVVVTLEDHLTPKLQAKVAEMVTDIFGEMLFTPPSGECLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP LK+RI+ISTKPPKEY A + ++ ++G+ D+E WG+EVP+ + S D
Sbjct: 235 SPAFLKKRIMISTKPPKEYKAATD----DDLVKKGRDLGDKEVWGREVPSFIRRDRSV-D 289
Query: 300 KDDFD------GGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVR 353
K+D + D+D++D DDK + N PEY+ LIAI AGKPKGG+ ECLKVDPDKVR
Sbjct: 290 KNDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLIAIEAGKPKGGITECLKVDPDKVR 349
Query: 354 RLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNM 413
RLSLSE+QLE A Y IVRFTQRNLLR+YPKG R+ SSNYNPLI WSHGAQMVAFNM
Sbjct: 350 RLSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFNM 409
Query: 414 Q---------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYY 446
Q N VFDP+ LP K TL+VT+YMGEGWYY
Sbjct: 410 QGLGRSLWVMQGMFRGNGGCGYIKKPDLLLKSNAVFDPEATLPVKTTLRVTIYMGEGWYY 469
Query: 447 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 506
DFPHTHFD YSPPDFY RVGIAGVPADTVMKKTKTLEDNWIP+W+E FEFPL+VPELALL
Sbjct: 470 DFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALL 529
Query: 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
RIEVHEYDMSEKDDFGGQ CLPV EL+QGIRAVPL ++ G + +SVKLL+ EF+
Sbjct: 530 RIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPLRNQDGVKCRSVKLLVRLEFV 584
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/604 (55%), Positives = 417/604 (69%), Gaps = 59/604 (9%)
Query: 6 YRVCFCFRRRFHVAASEAPDAVKSMFDQYS-----------------ENGTMTVDHLHRF 48
YR+ + R+F + D V+ F Q++ G M + L F
Sbjct: 19 YRMFKFYNRKFKINEVTPTDDVRDAFCQFAVGGGGGGTDGDSSDGDGSTGVMGAEQLCSF 78
Query: 49 LIEVQKEDKASKEDAQAIIDS-LRELKHLNIFQRRGLNLEAFFKYLF-GDINPPLSPTPV 106
L + + + +AQ +ID +R H+ F R GL+L+ FF +LF D+NPP+ TP
Sbjct: 79 LDD--HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFFNFLFYDDLNPPI--TPH 134
Query: 107 VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNV 166
VH DMTAP+SHYFIYTGHNSYLTGNQL+SDCS+VP+I+ALQ+GVRVIELD+WPNS ++
Sbjct: 135 VHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPVIKALQRGVRVIELDLWPNSTGTDI 194
Query: 167 DVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226
+VLHG T+T PV L+KCL+SI++YAF +S YPV+ITLEDHLTPDLQAKVAEM TQ G++
Sbjct: 195 NVLHGRTLTTPVPLMKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQM 254
Query: 227 LFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKE 286
L+ P S+ L EFPSP SL RIIISTKPPKEYLE++ K+ D+ S DE +E
Sbjct: 255 LYYPESDSLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQKDNNVSPSSEDETPRTEE 314
Query: 287 VPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346
+ L+S+ DF+ D+D+E D+++ ++ P Y++LI IHAGKPKG +KE +K
Sbjct: 315 IQTLESM----LFDQDFESKSDSDQE--DEEASEDQKPAYKRLITIHAGKPKGTVKEEMK 368
Query: 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406
V DKVRRLSLSEQ+L+ + D+VRFTQRNLLRIYPKG R +SSNY PLIGW+HGA
Sbjct: 369 VVVDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGTRFNSSNYKPLIGWTHGA 428
Query: 407 QMVAFNMQ------------------------------TGPHNEVFDPKVKLPAKKTLKV 436
QM+AFNMQ G H+EVFDP+ KLP K+TLKV
Sbjct: 429 QMIAFNMQGYGKSLWLMHGMFRANGGCGYVKKPNFLMKKGFHDEVFDPRKKLPVKETLKV 488
Query: 437 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 496
VYMG+GW DF HTHFDAYSPPDFY ++ I GVPAD KKTK +EDNW P W+EEF F
Sbjct: 489 KVYMGDGWRMDFSHTHFDAYSPPDFYTKMFIVGVPADNAKKKTKIIEDNWYPIWDEEFSF 548
Query: 497 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 556
PL+VPELALLRIEV EYDMSEKDDFGGQTCLPV+EL+ GIR+VPL+D+KGE+ KSV+LLM
Sbjct: 549 PLTVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSVPLYDKKGEKMKSVRLLM 608
Query: 557 HFEF 560
F F
Sbjct: 609 RFIF 612
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q944C1|PLCD4_ARATH Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 625 bits (1612), Expect = e-178, Method: Compositional matrix adjust.
Identities = 322/597 (53%), Positives = 412/597 (69%), Gaps = 48/597 (8%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSE-NGTMTVDHLHRFLIEVQKEDKASKEDA 63
+Y+ C F R+F + S + V+ +F++Y+E + M+ + L + + E E + S E+A
Sbjct: 9 SYKFCLIFTRKFRMTESGPVEDVRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGETSLEEA 68
Query: 64 QAIIDS-LRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIY 121
+ I+D LR H+ F RR L L+ F YLF D+NPP++ VH +M AP+SHYFI+
Sbjct: 69 ERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFIF 126
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
TGHNSYLTGNQL+S+CS++PI AL++GVRV+ELD+WP D+V V HG T+T V+L
Sbjct: 127 TGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKLG 185
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCL SIK AF S+YPV+ITLEDHLTP LQ KVA+M+TQT G++L+ S+ +EFPSP
Sbjct: 186 KCLESIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSQGCQEFPSP 245
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
E LK +I+ISTKPPKEYLEA + KEK+N ++GK S DE+ WGKE +L S + D D
Sbjct: 246 EELKEKILISTKPPKEYLEANDTKEKDN-GEKGKDS-DEDVWGKEPEDLIS---TQSDLD 300
Query: 302 DFDGGVDNDEEDSD-------DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRR 354
V++ +D + D S +APEY++LIAIHAGKPKGGL+ LKVDP+K+RR
Sbjct: 301 KVTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRR 360
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LSLSEQ LE AV +YG D++RFTQ+N LRIYPKG R +SSNY P IGW GAQM+AFNMQ
Sbjct: 361 LSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQ 420
Query: 415 ------------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 444
P+ + F PK KKTLKV V MG+GW
Sbjct: 421 GYGRALWLMEGMFRANGGCGYVKKPDFLMDASPNGQDFYPKDNSSPKKTLKVKVCMGDGW 480
Query: 445 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA 504
DF THFD+YSPPDF+ RVGIAG P D VM+KTK D W P WN+EF FPL+VPELA
Sbjct: 481 LLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFTFPLAVPELA 540
Query: 505 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
LLR+EVHE+D++EKDDFGGQTCLPVSE++QGIRAVPL +RKG +Y S +LLM FEF+
Sbjct: 541 LLRVEVHEHDVNEKDDFGGQTCLPVSEIRQGIRAVPLFNRKGVKYSSTRLLMRFEFV 597
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q944C2|PLCD5_ARATH Phosphoinositide phospholipase C 5 OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 305/594 (51%), Positives = 388/594 (65%), Gaps = 59/594 (9%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDA 63
+Y++ C + + P V + F +Y+E + MT + L RFL+EVQ E + DA
Sbjct: 7 SYKMGLCCSDKLRMNRGAPPQDVVTAFVEYTEGRSHMTAEQLCRFLVEVQDETEVLVSDA 66
Query: 64 QAIIDSLR-ELKHLNIFQRRGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIY 121
+ II+ + E H+ F R LNL+ FF +LF D +N P+ VH DM +P+SHYFIY
Sbjct: 67 EKIIERITCERHHITKFLRHTLNLDDFFSFLFSDDLNHPIDSK--VHQDMASPLSHYFIY 124
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
T HNSYLTGNQ+NS+CSDVP+I+AL++GVR +ELD+WPNS KD++ VLHG T PVEL+
Sbjct: 125 TSHNSYLTGNQINSECSDVPLIKALKRGVRALELDMWPNSTKDDILVLHGWAWTPPVELV 184
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCLRSIKE+AF AS YPV++TLEDHLTPDLQAK AEM+ + ++++ P + LKEFPSP
Sbjct: 185 KCLRSIKEHAFYASAYPVILTLEDHLTPDLQAKAAEMMKEIFMDMVYFPEAGGLKEFPSP 244
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG----SADEEAWGKEVPNLKSLNNSA 297
E LK +I+ISTKPPK L +++K+ E+D+ GK SAD+E +E K
Sbjct: 245 EDLKYKIVISTKPPKGSL--RKDKDSESDAS-GKASSDVSADDEKTEEETSEAK------ 295
Query: 298 CDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
N+E+ D +S + + Y +LI I +G K GLKE L +D VRRLSL
Sbjct: 296 -----------NEEDGFDQESSNLDFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRLSL 344
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ--- 414
EQ+ + A YG ++++FTQ+NLLRIYPK RV+SSNY P GW +GAQMVAFNMQ
Sbjct: 345 REQKFKKATEMYGTEVIKFTQKNLLRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQGYG 404
Query: 415 ---------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYD 447
EVF+PK KLP KKTLKV VYMG+GW
Sbjct: 405 RALWMMHGMFRGNGGCGYVKKPDFMMNNNLSGEVFNPKAKLPIKKTLKVKVYMGKGWDSG 464
Query: 448 FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 507
F T F+ +S P+FY RVGI GV D VMKKTK + W P WNEEFEF L+VPELALLR
Sbjct: 465 FQRTCFNTWSSPNFYTRVGITGVRGDKVMKKTKKEQKTWEPFWNEEFEFQLTVPELALLR 524
Query: 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
IEVH+Y+M EKDDF GQTCLPVSEL+QGIR+VPL+DRKGER SV LLM F F+
Sbjct: 525 IEVHDYNMPEKDDFSGQTCLPVSELRQGIRSVPLYDRKGERLVSVTLLMRFHFL 578
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q39032|PLCD1_ARATH Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 300/588 (51%), Positives = 376/588 (63%), Gaps = 65/588 (11%)
Query: 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKED 62
K++++VCFC R F V +SE P+ +K++F YS++ M+ D + RF+I+VQ E A D
Sbjct: 2 KESFKVCFCCVRNFKVKSSEPPEEIKNLFHDYSQDDRMSADEMLRFVIQVQGETHA---D 58
Query: 63 AQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYT 122
+ D LKH +F RG++LE F++YL D N PL T V DM P+SHYF+YT
Sbjct: 59 INYVKDIFHRLKHHGVFHPRGIHLEGFYRYLLSDFNSPLPLTREVWQDMNQPLSHYFLYT 118
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
GHNSYLTGNQLNS+ S PI++AL+ GVRVIELD+WPNS +V HGGT+T+ +L K
Sbjct: 119 GHNSYLTGNQLNSNSSIEPIVKALRNGVRVIELDLWPNSSGKEAEVRHGGTLTSREDLQK 178
Query: 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
CL +KE AF S YPVV+TLEDHLTP LQ KVA+MV++T G LF E + FPSPE
Sbjct: 179 CLNVVKENAFQVSAYPVVLTLEDHLTPILQKKVAKMVSKTFGGSLFQCTDETTECFPSPE 238
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSA-DEEAWGKEVPNLKSLNNSACDKD 301
SLK +I+ISTKPPKEYL+ +Q KGS DE K++ + +
Sbjct: 239 SLKNKILISTKPPKEYLQ----------TQISKGSTTDESTRAKKISDAEEQVQEE---- 284
Query: 302 DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQ 361
+ + A EYR LI+IHAG KGGLK CL DP++V RLS+SEQ
Sbjct: 285 ----------------DEESVAIEYRDLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQW 328
Query: 362 LENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT------ 415
LE T G D+V+FTQRNLLRI+PK R DSSNY+PL+GW HGAQMVAFNMQ+
Sbjct: 329 LETLAKTRGPDLVKFTQRNLLRIFPKTTRFDSSNYDPLVGWIHGAQMVAFNMQSHGRYLW 388
Query: 416 ------------------------GPHNEVFDPKVK-LPAKKTLKVTVYMGEGWYYDFPH 450
GP E+FDP + LP K TLKV +Y GEGW DFP
Sbjct: 389 MMQGMFKANGGCGYVKKPDVLLSNGPEGEIFDPCSQNLPIKTTLKVKIYTGEGWNMDFPL 448
Query: 451 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510
HFD YSPPDFYA+VGIAGVP DT +T+ +D W P W++EFEFPL VPEL+LL I V
Sbjct: 449 DHFDRYSPPDFYAKVGIAGVPLDTASYRTEIDKDEWFPIWDKEFEFPLRVPELSLLCITV 508
Query: 511 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 558
+YD + ++DF GQTC P+SE++ GIRAV LHDR GE YK V+LLM F
Sbjct: 509 KDYDSNTQNDFAGQTCFPLSEVRPGIRAVRLHDRAGEVYKHVRLLMRF 556
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Required for secondary responses to abscisic acid signals. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q56W08|PLCD3_ARATH Phosphoinositide phospholipase C 3 OS=Arabidopsis thaliana GN=PLC3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 291/584 (49%), Positives = 370/584 (63%), Gaps = 60/584 (10%)
Query: 4 QTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDA 63
++++VCFC R F + P ++K +F+ YS NG M+ D L RF+ EVQ E A +
Sbjct: 3 ESFKVCFCCSRSFKEKTRQPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYV 62
Query: 64 QAIIDSLRELKHLNIFQRRGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYT 122
Q I S+ KH N+F GL +L AF++YLF D N PL + VHHDM AP+SHYF+YT
Sbjct: 63 QDIFHSV---KHHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYT 119
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
GHNSYLTGNQ+NS S PI++AL+KGV+VIELD+WPN + +V HG T+T+ +L K
Sbjct: 120 GHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQK 179
Query: 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
CL +IK+ AF S+YPV+ITLEDHL P LQA+VA+M+T+T +LF SE K FPSPE
Sbjct: 180 CLTAIKDNAFHVSDYPVIITLEDHLPPKLQAQVAKMLTKTYRGMLFRRVSESFKHFPSPE 239
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDD 302
LK +I+ISTKPPKEYLE+K + + E +W + +
Sbjct: 240 ELKGKILISTKPPKEYLESKTVHTTRTPTVK------ETSWNRVANKIL----------- 282
Query: 303 FDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQL 362
EE D +S EA YR LIAIHA K K+CL DP+K R+S+ EQ L
Sbjct: 283 --------EEYKDMES---EAVGYRDLIAIHAANCKDPSKDCLSDDPEKPIRVSMDEQWL 331
Query: 363 ENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTG------ 416
+ V T G D+VRFTQRNL+RIYPKG RVDSSNY+P +GW+HGAQMVAFNMQ
Sbjct: 332 DTMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWI 391
Query: 417 ---------------------PHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDA 455
+ +FDP + P K TLKV +Y GEGW DF HTHFD
Sbjct: 392 MQGMFRGNGGCGYVKKPRILLDEHTLFDPCKRFPIKTTLKVKIYTGEGWDLDFHHTHFDQ 451
Query: 456 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYD 514
YSPPDF+ ++GIAGVP DTV +T+T D W P W N+EF F LSVPELALL +V +YD
Sbjct: 452 YSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLSVPELALLWFKVQDYD 511
Query: 515 MSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 558
++DF GQTCLP+ ELK G+RAV LHDR G+ YK+ +LL+ F
Sbjct: 512 NDTQNDFAGQTCLPLPELKSGVRAVRLHDRTGKAYKNTRLLVSF 555
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q9STZ3|PLCD8_ARATH Phosphoinositide phospholipase C 8 OS=Arabidopsis thaliana GN=PLC8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 208/584 (35%), Positives = 293/584 (50%), Gaps = 95/584 (16%)
Query: 14 RRFHVAASEAPDAVKSMFDQ----YSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDS 69
RR+ + +PD + F Y ++ T+ L L ++ED A A+ I
Sbjct: 5 RRWESHPANSPDLILQFFGNEFHGYGDDMPETLRRLTELLGYEKEEDGAGMNAAKKIAAE 64
Query: 70 L-RELKHLNIFQR-RGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNS 126
L R + F+R R L L+ ++LF +NPP+ VHHDM AP+SHYFI+T NS
Sbjct: 65 LNRRKDDIPAFRRLRCLELDQLNEFLFSTKLNPPIGDQ--VHHDMHAPLSHYFIHTSLNS 122
Query: 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186
Y TGN S +PII AL++GVRV+ELD+WP+ + ++ V P++L +CL S
Sbjct: 123 YFTGNVFGK-YSILPIIEALEQGVRVVELDLWPDGR-GSICVRPSWNFEKPLKLQECLDS 180
Query: 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKR 246
IKE+AF YP++IT +D L P+LQ+K +M+ QT +++ L+ FPSP+ L+
Sbjct: 181 IKEHAFTKCTYPLIITFKDGLKPELQSKATQMIQQTFNHMVYHHDPHSLEVFPSPQQLRN 240
Query: 247 RIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGG 306
+I+IS +PPKE L A + DD G
Sbjct: 241 KILISRRPPKELLYAND-------------------------------------DDGKVG 263
Query: 307 VDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAV 366
V N E QH P Y+ L++ H +P+G L+ L +K++R
Sbjct: 264 VRNGVE----IRQHPADPNYQSLVSFHVVEPRGMLQNVLTGKANKIQR-----------P 308
Query: 367 GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVA---------------- 410
G Y DI+ FTQ+ LR P+ + + Y P W HGAQ++A
Sbjct: 309 GWYETDIISFTQKRFLRTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKEKLWLMQGM 368
Query: 411 --------------FNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAY 456
F + GP VF P V K LKV +YMG+GW DF
Sbjct: 369 FRANGGCGYVKKPDFLLNAGPSG-VFYPTVNPVVVKILKVKIYMGDGWIVDF-KKRIGRL 426
Query: 457 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS 516
S PD Y R+ IAGVP D + KT + W P+W EEF FPL+ P+LAL+ EV++Y++S
Sbjct: 427 SKPDLYVRISIAGVPHDENIMKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEVYDYEVS 486
Query: 517 EKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560
D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 487 TADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q6NMA7|PLCD9_ARATH Phosphoinositide phospholipase C 9 OS=Arabidopsis thaliana GN=PLC9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 201/590 (34%), Positives = 296/590 (50%), Gaps = 104/590 (17%)
Query: 12 FRRRFHVAASEAPDAVKSMF-DQYSENGTMTVDHLHRF--LIEVQKEDKASKEDAQAIID 68
R++F + + P V + F ++Y + L F L++ +K++ + +A ID
Sbjct: 4 LRKKFEMKQANQPGRVPNYFRNKYHGYDDDMPNLLPTFIKLLDTEKDEDGAGLNAAEQID 63
Query: 69 SLRELKHLNIFQRRGLN---LEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGH 124
+ + +I + R L L ++LF ++NPP+S V H DM AP+SHYFI+T
Sbjct: 64 RELKSRKCDILKFRNLTILELPHLNEFLFSTELNPPISDQ-VRHRDMNAPLSHYFIHTSL 122
Query: 125 NSYLTGNQLNSDCSDV-PIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKC 183
SY TGN + + PII AL++GVRV+ELD+ P K D + V P+EL +C
Sbjct: 123 KSYFTGNNVFGRLYSIEPIIDALKQGVRVVELDLLPFGK-DGICVRPKWNFEKPLELQEC 181
Query: 184 LRSIKEYAFVASE-YPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFPSP 241
L +IK++AF + YPV+IT++D L PDLQ+KV +M+ QT G++++ + L+EFPSP
Sbjct: 182 LDAIKQHAFTPTRSYPVIITIKDSLKPDLQSKVTQMIDQTFGDMVYHEDPQQSLEEFPSP 241
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
L+ +I+IS +PP + L AK
Sbjct: 242 AELQNKILISRRPPTKLLYAKA-------------------------------------- 263
Query: 302 DFDGGVDND-EEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
+ GV+ + +E S DK+ Y+ ++ HA +P+G L++ L D +
Sbjct: 264 -VENGVELEIQEGSTDKN-------YQSVVGFHAVEPRGMLQKALTDDVQQ--------- 306
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS-NYNPLIGWSHGAQMVAFNMQ----- 414
G Y D++ FTQ LR PK + S+ Y P W HGAQM+A + Q
Sbjct: 307 -----PGWYERDVISFTQNKFLRTRPKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKEK 361
Query: 415 ------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 450
+ VF P KTLKV +YMG+GW DF
Sbjct: 362 LWLMQGMFRANGGCGYVKKPNFLLNAGSSGVFYPTENPVVVKTLKVKIYMGDGWIVDF-K 420
Query: 451 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510
S PD Y R+ IAGVP D + T + W P+W EEF FPL+ P+LAL+ EV
Sbjct: 421 KRIGRLSKPDLYVRISIAGVPHDEKIMNTTVKNNEWKPTWGEEFTFPLTYPDLALISFEV 480
Query: 511 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560
++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 481 YDYEVSTPDYFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q8N3E9|PLCD3_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 OS=Homo sapiens GN=PLCD3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 262/568 (46%), Gaps = 71/568 (12%)
Query: 27 VKSMFDQYS-ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
++ +F QYS E+ ++ L FL E Q E+ A+ AQ +I + EL Q +
Sbjct: 256 LEEIFHQYSGEDRVLSAPELLEFL-EDQGEEGATLARAQQLIQTY-ELNE-TAKQHELMT 312
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR 144
L+ F YL L T V DM P++HYFI + HN+YLT +Q+ S +R
Sbjct: 313 LDGFMMYLLSPEGAALDNTHTCVFQDMNQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVR 372
Query: 145 ALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLE 204
A +G R +ELD W + V + HG T+T+ + +++++++AF S YPV+++LE
Sbjct: 373 AFAQGCRCVELDCWEGPGGEPV-IYHGHTLTSKILFRDVVQAVRDHAFTLSPYPVILSLE 431
Query: 205 DHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAK 262
+H + QA +A + LG++L T S +E PSPE LK R+++ K
Sbjct: 432 NHCGLEQQAAMARHLCTILGDMLVTQALDSPNPEELPSPEQLKGRVLV-----------K 480
Query: 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322
+K S+ G+ +D E ++ + +A + +
Sbjct: 481 GKKLPAARSEDGRALSDREEEEEDDEEEEEEVEAAAQR----------------RLAKQI 524
Query: 323 APEYRKL-IAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNL 381
+PE L + HA + + P +V SLSE++ + + GN VR R L
Sbjct: 525 SPELSALAVYCHATRLRTLHPAPNAPQPCQVS--SLSERKAKKLIREAGNSFVRHNARQL 582
Query: 382 LRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH----------------------- 418
R+YP G+R++S+NY+P W+ G Q+VA N QT +
Sbjct: 583 TRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAGRFLVNGQCGYVLKPAC 642
Query: 419 ----NEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPAD 473
+ FDP+ P + TL + V + P + + +S D R+ I GVPAD
Sbjct: 643 LRQPDSTFDPEYPGPPRTTLSIQVLTAQ----QLPKLNAEKPHSIVDPLVRIEIHGVPAD 698
Query: 474 TVMKKTK-TLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
++T L + + P W + +F L PELAL+R V +YD + +DF GQ LP+S L
Sbjct: 699 CARQETDYVLNNGFNPRWGQTLQFQLRAPELALVRFVVEDYDATSPNDFVGQFTLPLSSL 758
Query: 533 KQGIRAVPLHDRKGERYKSVKLLMHFEF 560
KQG R + L + G L +
Sbjct: 759 KQGYRHIHLLSKDGASLSPATLFIQIRI 786
|
Hydrolyzes the phosphatidylinositol 4,5-bisphosphate (PIP2) to generate 2 second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). DAG mediates the activation of protein kinase C (PKC), while IP3 releases Ca(2+) from intracellular stores. Essential for trophoblast and placental development. May participate in cytokinesis by hydrolyzing PIP2 at the cleavage furrow. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 561 | ||||||
| 225448433 | 593 | PREDICTED: phosphoinositide phospholipas | 0.998 | 0.944 | 0.752 | 0.0 | |
| 225448435 | 592 | PREDICTED: phosphoinositide phospholipas | 0.996 | 0.944 | 0.752 | 0.0 | |
| 255585958 | 594 | 1-phosphatidylinositol-4,5-bisphosphate | 0.998 | 0.942 | 0.742 | 0.0 | |
| 359486403 | 580 | PREDICTED: phosphoinositide phospholipas | 0.980 | 0.948 | 0.747 | 0.0 | |
| 224098612 | 590 | predicted protein [Populus trichocarpa] | 0.994 | 0.945 | 0.730 | 0.0 | |
| 224112503 | 587 | predicted protein [Populus trichocarpa] | 0.992 | 0.948 | 0.725 | 0.0 | |
| 351725699 | 600 | phosphoinositide-specific phospholipase | 0.987 | 0.923 | 0.704 | 0.0 | |
| 116563473 | 588 | phospholipase C [Nicotiana tabacum] | 0.994 | 0.948 | 0.702 | 0.0 | |
| 351720874 | 600 | phosphatidylinositol-specific phospholip | 0.983 | 0.92 | 0.705 | 0.0 | |
| 2853039 | 585 | phosphoinositide-specific phospholipase | 0.989 | 0.948 | 0.698 | 0.0 |
| >gi|225448433|ref|XP_002269949.1| PREDICTED: phosphoinositide phospholipase C 2 isoform 1 [Vitis vinifera] gi|147828132|emb|CAN64084.1| hypothetical protein VITISV_006935 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/594 (75%), Positives = 496/594 (83%), Gaps = 34/594 (5%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS VHHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSTALGVHHDMTAPLSHYFV 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 181 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 240
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKEV NLK + A D+
Sbjct: 241 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKEVSNLKP-STVAVDE 299
Query: 301 D---DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ + + D ++ D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSL
Sbjct: 300 SNLEEEENIDEEDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSL 359
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ--- 414
SEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQ
Sbjct: 360 SEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQGYG 419
Query: 415 ---------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYD 447
G H+ VFDPK KLP K TLKVTVYMGEGWY+D
Sbjct: 420 RSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTTLKVTVYMGEGWYFD 479
Query: 448 FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 507
F HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E FEFPL+VPELALLR
Sbjct: 480 FRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEHFEFPLTVPELALLR 539
Query: 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVKLLM FEF+
Sbjct: 540 VEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVKLLMRFEFV 593
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448435|ref|XP_002270230.1| PREDICTED: phosphoinositide phospholipase C 2 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/594 (75%), Positives = 496/594 (83%), Gaps = 35/594 (5%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS V HHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSLFQV-HHDMTAPLSHYFV 119
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 120 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 179
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 180 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKEV NLK + A D+
Sbjct: 240 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKEVSNLKP-STVAVDE 298
Query: 301 D---DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ + + D ++ D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSL
Sbjct: 299 SNLEEEENIDEEDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSL 358
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ--- 414
SEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQ
Sbjct: 359 SEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQGYG 418
Query: 415 ---------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYD 447
G H+ VFDPK KLP K TLKVTVYMGEGWY+D
Sbjct: 419 RSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTTLKVTVYMGEGWYFD 478
Query: 448 FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 507
F HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E FEFPL+VPELALLR
Sbjct: 479 FRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEHFEFPLTVPELALLR 538
Query: 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVKLLM FEF+
Sbjct: 539 VEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVKLLMRFEFV 592
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585958|ref|XP_002533650.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative [Ricinus communis] gi|223526463|gb|EEF28738.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/595 (74%), Positives = 501/595 (84%), Gaps = 35/595 (5%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKAS 59
MSKQTYRVCFCFRRRF +A +EAP +KS+FDQYS+N G M++D L RFL+E+QK+D A+
Sbjct: 1 MSKQTYRVCFCFRRRFRLAVAEAPQEIKSLFDQYSDNNGLMSIDQLRRFLVEIQKQDNAT 60
Query: 60 KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
EDAQAI ++L ELKHLNIF R+GLNLEAFFKYLFGDINPPL VHHDMT P+SHYF
Sbjct: 61 TEDAQAIFNNLHELKHLNIFHRKGLNLEAFFKYLFGDINPPLDVKRGVHHDMTCPLSHYF 120
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII+ALQ+GVRVIELDIWPNS KDNV+VLHG T+T PVE
Sbjct: 121 IYTGHNSYLTGNQLSSDCSDVPIIQALQRGVRVIELDIWPNSTKDNVEVLHGRTLTTPVE 180
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LIKCLRSIKE+AF AS+YPVVITLEDHLTPDLQAKVAEM+TQT G+ILFTPGSECLKEFP
Sbjct: 181 LIKCLRSIKEHAFRASDYPVVITLEDHLTPDLQAKVAEMITQTFGDILFTPGSECLKEFP 240
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SPESLK+RII+STKPPKEYLE +E +E+E DSQ GK +DEE WGKE+P+LK + D
Sbjct: 241 SPESLKKRIIVSTKPPKEYLEVREIREREGDSQSGKPGSDEETWGKEIPDLKG-HFRVDD 299
Query: 300 KDDFDGGVDNDEE---DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLS 356
K++ D ++DE+ D D+KSQ N APEY+ LIAIHAGKPKGG++ECLKVDPDKVRRLS
Sbjct: 300 KNELDEDNNDDEDAAPDGDNKSQQNIAPEYKHLIAIHAGKPKGGIEECLKVDPDKVRRLS 359
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ-- 414
LSEQQLE A T+G +IVRFTQRN+LR+YPKGIRVDSSNYNPLIGW HGAQMVAFNMQ
Sbjct: 360 LSEQQLEKAAETHGKEIVRFTQRNILRVYPKGIRVDSSNYNPLIGWMHGAQMVAFNMQGH 419
Query: 415 ----------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYY 446
+GPH EVFDP+ KLP K TLKV VYMGEGWYY
Sbjct: 420 GRSLWLMQGMFRANGGCGYVKKPDFLLKSGPHGEVFDPRAKLPVKTTLKVKVYMGEGWYY 479
Query: 447 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 506
DF THFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNWIP WNEEFEFPL+VPELALL
Sbjct: 480 DFDRTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWIPVWNEEFEFPLTVPELALL 539
Query: 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
R+EVHEYDMSEKDDFGGQ+CLPVSEL++GIRA+PLHDRKG +Y SVKLL+ F+F+
Sbjct: 540 RVEVHEYDMSEKDDFGGQSCLPVSELRKGIRAIPLHDRKGVKYNSVKLLVRFDFV 594
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486403|ref|XP_003633437.1| PREDICTED: phosphoinositide phospholipase C 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/591 (74%), Positives = 487/591 (82%), Gaps = 41/591 (6%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS VHHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSTALGVHHDMTAPLSHYFV 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 181 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 240
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKE + N
Sbjct: 241 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKESNLEEEENIDE--- 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
D ++ D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSLSEQ
Sbjct: 298 --------EDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSLSEQ 349
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ------ 414
+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQ
Sbjct: 350 ELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQGYGRSL 409
Query: 415 ------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 450
G H+ VFDPK KLP K TLKVTVYMGEGWY+DF H
Sbjct: 410 WIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTTLKVTVYMGEGWYFDFRH 469
Query: 451 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510
THFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E FEFPL+VPELALLR+EV
Sbjct: 470 THFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEHFEFPLTVPELALLRVEV 529
Query: 511 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
HEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVKLLM FEF+
Sbjct: 530 HEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVKLLMRFEFV 580
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098612|ref|XP_002311223.1| predicted protein [Populus trichocarpa] gi|222851043|gb|EEE88590.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/593 (73%), Positives = 492/593 (82%), Gaps = 35/593 (5%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF +A +E PD +K++FD YSENG MT DH+HRFLIEVQK++KA+
Sbjct: 1 MSKQTYRVCFCFRRRFKLAVAEVPDEIKALFDLYSENGIMTADHIHRFLIEVQKQEKATF 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ+I++SL KHL++F R+GL+LEAFFKYLFGD NPPL VHHDMTAP+SHYFI
Sbjct: 61 EEAQSIVESL---KHLSLFHRKGLHLEAFFKYLFGDTNPPLDLKLGVHHDMTAPLSHYFI 117
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+S+CSDVPII AL+KGVRVIELDIWPNS D+V+VLHG T+T PV+L
Sbjct: 118 YTGHNSYLTGNQLSSECSDVPIINALKKGVRVIELDIWPNSDNDDVEVLHGRTLTTPVQL 177
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSI E+AF ASE+PVVITLEDHLTPDLQAKVA+MVTQT G+ILFTPGSE LKEFPS
Sbjct: 178 IKCLRSINEHAFTASEFPVVITLEDHLTPDLQAKVAQMVTQTFGDILFTPGSERLKEFPS 237
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS--LNNSAC 298
P+SLKRRIIISTKPPKEYLEAKE K+KE+ Q+G ++DEEAWGKE+P L L +
Sbjct: 238 PDSLKRRIIISTKPPKEYLEAKEIKDKESHYQKGNAASDEEAWGKEIPILNGHILADDKN 297
Query: 299 DKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLS 358
+ D D + D ++ D K QH+ APEY++LIAIHAGKPKGGL ECLKVDPDKVRRLSLS
Sbjct: 298 ESDKDDDDAEEDLDEGDHKLQHDIAPEYKRLIAIHAGKPKGGLDECLKVDPDKVRRLSLS 357
Query: 359 EQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ---- 414
EQQLE A T+G +IVRFTQRN+LR+YPKG RV+SSNYNPLIGW HGAQMVAFNMQ
Sbjct: 358 EQQLEKAAETHGKEIVRFTQRNILRVYPKGTRVNSSNYNPLIGWMHGAQMVAFNMQGYGR 417
Query: 415 --------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDF 448
+GPH EVFD K KLP +KTLKV +YMGEGW+YDF
Sbjct: 418 SLWLMQGMFRANGGCGFVKKPSFLLKSGPHGEVFDTKAKLPMQKTLKVKIYMGEGWFYDF 477
Query: 449 PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 508
HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED+WIP WNEEFEFPL+VPELALLRI
Sbjct: 478 QHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDSWIPFWNEEFEFPLTVPELALLRI 537
Query: 509 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
EVHEYDMSEKDDFGGQTCLPV EL++GIRAVPLHDRKGERYK VKLL+ EF+
Sbjct: 538 EVHEYDMSEKDDFGGQTCLPVWELREGIRAVPLHDRKGERYKCVKLLVRLEFV 590
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112503|ref|XP_002316212.1| predicted protein [Populus trichocarpa] gi|222865252|gb|EEF02383.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/591 (72%), Positives = 491/591 (83%), Gaps = 34/591 (5%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVC CF RRF +A +EAP+ ++++F+QYS+NG MT +HLHRFLIEVQK++KA+
Sbjct: 1 MSKQTYRVCLCFSRRFKLAVAEAPEEIRALFNQYSDNGIMTDNHLHRFLIEVQKQEKATL 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQAII+SL KHL IF R+GLNLEAFFKYLFGD NPPL HHDMTAP+SHYFI
Sbjct: 61 EEAQAIIESL---KHLAIFHRKGLNLEAFFKYLFGDNNPPLDLKLGAHHDMTAPISHYFI 117
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII AL+KGVRVIELDIWPNS KD+V+VLHG T+T PV+L
Sbjct: 118 YTGHNSYLTGNQLSSDCSDVPIINALKKGVRVIELDIWPNSDKDDVEVLHGRTLTTPVQL 177
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSIKE+AF ASE+PVVITLEDHLTPDLQ+KV++MVTQT G+ LF+PGSECLKEFPS
Sbjct: 178 IKCLRSIKEHAFTASEFPVVITLEDHLTPDLQSKVSKMVTQTFGDTLFSPGSECLKEFPS 237
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRRIIISTKPPKEYLEAKE K+KE+DSQ+G + DEEAWGKE+ NLK ++
Sbjct: 238 PESLKRRIIISTKPPKEYLEAKEIKDKESDSQKGNAAPDEEAWGKEILNLKGADDKNELD 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
+D + ++ E D K H+ APEY++LIAI AGKPKGGL+ECLKVDPDK RRLSLSEQ
Sbjct: 298 EDDNDAEEDPGE-GDHKLPHDIAPEYKRLIAIPAGKPKGGLEECLKVDPDKARRLSLSEQ 356
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ------ 414
QLENA T+G +IVRFTQRN+LR+YPKGIRV+SSNYNPLIGW HGAQMVAFNMQ
Sbjct: 357 QLENAAETHGKEIVRFTQRNILRVYPKGIRVNSSNYNPLIGWMHGAQMVAFNMQGYGRSL 416
Query: 415 ------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 450
+GPH EVFDPK KLP +KTLKV +YMGEGWYYDF H
Sbjct: 417 WMMQGMFRANGGCGFVKKPDFLLKSGPHGEVFDPKAKLPVQKTLKVKIYMGEGWYYDFHH 476
Query: 451 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510
THFDAYSPPDFY RVGIAGVPADT MKKT+TLEDNWIP W+E FEFPL+VP+LALLRIEV
Sbjct: 477 THFDAYSPPDFYVRVGIAGVPADTGMKKTRTLEDNWIPVWDEGFEFPLTVPDLALLRIEV 536
Query: 511 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
HEYDMSEKDDFGGQTCLPV EL++GIRAVPLHDRKGE+Y SVKLL+ EF+
Sbjct: 537 HEYDMSEKDDFGGQTCLPVRELREGIRAVPLHDRKGEKYNSVKLLVRLEFV 587
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351725699|ref|NP_001235310.1| phosphoinositide-specific phospholipase C P13 [Glycine max] gi|1399305|gb|AAB03258.1| phosphoinositide-specific phospholipase C P13 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/602 (70%), Positives = 483/602 (80%), Gaps = 48/602 (7%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKE 61
SKQTY VCFC+RRRF +A +EAP +K++F++YSEN MT HL RFL++VQ+++KA++E
Sbjct: 3 SKQTYSVCFCWRRRFKLALAEAPSEIKTLFNEYSENELMTPSHLKRFLVDVQRQEKATEE 62
Query: 62 DAQAIIDSLRELKHLNIFQRRG--LNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
DAQAIIDS R F RRG LNLE FFKYLF D NPPL P+ VHHDMT P+SHYF
Sbjct: 63 DAQAIIDSFRH------FHRRGAGLNLETFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYF 116
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII AL+KGVRVIELDIWPN+ KD++DVLHG T+T PVE
Sbjct: 117 IYTGHNSYLTGNQLSSDCSDVPIINALKKGVRVIELDIWPNASKDSIDVLHGRTLTTPVE 176
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LI+CLRSIK++AFVASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTP SE +KEFP
Sbjct: 177 LIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPNSESVKEFP 236
Query: 240 SPESLKRRIIISTKPPKEYLEAKE---------EKEKENDSQRGKGSADEEAWGKEVPNL 290
SPESLK+RIIISTKPPKEYLEAKE EKEK +DS+ GK S ++EAWGKEVP+L
Sbjct: 237 SPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSEHGKASGEDEAWGKEVPSL 296
Query: 291 KSLNNSACDKDDFDGGVDNDEE-DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDP 349
K ++ D ++++EE D DKS HNEAPEYR LIAIHAGKPKGGL ECLKVDP
Sbjct: 297 KGGTIEDYKDNNVDEDLNDEEEFDESDKSHHNEAPEYRHLIAIHAGKPKGGLVECLKVDP 356
Query: 350 DKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMV 409
+KVRRLSLSEQQLE A YG IVRFTQRN+LR+YPKG R+DSSNYNPLIGW HGAQMV
Sbjct: 357 EKVRRLSLSEQQLEKAAINYGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMV 416
Query: 410 AFNMQ------------------------------TGPHNEVFDPKVKLPAKKTLKVTVY 439
AFNMQ TGP +EVF+PK KLP K TLKVTVY
Sbjct: 417 AFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFNPKAKLPVKTTLKVTVY 476
Query: 440 MGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS 499
MGEGWYYDF HTHFD YSPPDFY RVGIAGVP DT+MK+TK +EDNW+P+WNE FEFPL+
Sbjct: 477 MGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIEDNWLPTWNEAFEFPLT 536
Query: 500 VPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFE 559
VPELALLRIEVHEYDMSEKDDFGGQTCLP+ EL+ GIRA+PLH +KG++Y +VKLLM FE
Sbjct: 537 VPELALLRIEVHEYDMSEKDDFGGQTCLPIWELRSGIRAIPLHSQKGDKYNTVKLLMRFE 596
Query: 560 FI 561
FI
Sbjct: 597 FI 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116563473|gb|ABJ99758.1| phospholipase C [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/591 (70%), Positives = 485/591 (82%), Gaps = 33/591 (5%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MS+QTYRVCFCFRRRF V A+EAP VK++F++YS+NG M ++L RFLIEVQKE+ +S
Sbjct: 1 MSRQTYRVCFCFRRRFRVVAAEAPADVKNLFNKYSDNGVMNAENLQRFLIEVQKEENSSI 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ I+++L +LK LNIF RRGL+L+AFFKYLF DINPP++P +HHDM P+SHYFI
Sbjct: 61 EDAQGIMNNLHDLKILNIFHRRGLHLDAFFKYLFADINPPINPKRGIHHDMNEPLSHYFI 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII+AL +GVRVIELDIWPNS KD+V+VLHGGT+T PV L
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIQALHRGVRVIELDIWPNSAKDDVEVLHGGTLTTPVAL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSIKE+AF SEYPVVITLEDHLTPDLQAKVAEM+TQT G++LF+P S CLK FPS
Sbjct: 181 IKCLRSIKEHAFSVSEYPVVITLEDHLTPDLQAKVAEMITQTFGDMLFSPDS-CLKNFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRR++ISTKPPKEYL+AKE KEK DS++G S D EAWG+EV +LK+ N D
Sbjct: 240 PESLKRRVLISTKPPKEYLQAKEVKEK--DSKKGTESPDTEAWGREVSDLKARYNDKDDS 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DD G D++ ++ D SQ N APEY+ LIAIHAGK KGGL + L+VDPDKVRRLSLSEQ
Sbjct: 298 DDGAGVEDDESDEGDPNSQQNVAPEYKCLIAIHAGKGKGGLSDWLRVDPDKVRRLSLSEQ 357
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ------ 414
+L AV T+G +I+RFTQRNLLRIYPKGIR DSSNYNP + W+HGAQMVAFNMQ
Sbjct: 358 ELGKAVVTHGKEIIRFTQRNLLRIYPKGIRFDSSNYNPFVAWTHGAQMVAFNMQGYGRSL 417
Query: 415 ------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 450
GP+N++FDP+ LP K TLKVTV+MGEGWYYDF H
Sbjct: 418 WLMHGMFRSNGGCGYVKKPDILLKAGPNNQIFDPEANLPVKTTLKVTVFMGEGWYYDFNH 477
Query: 451 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510
THFDAYSPPDFYA++GIAGVPAD VMKKT+TLEDNWIP+W+E+FEFPL+VPELALLR+EV
Sbjct: 478 THFDAYSPPDFYAKIGIAGVPADNVMKKTRTLEDNWIPTWDEKFEFPLTVPELALLRVEV 537
Query: 511 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
HEYDMSEKDDF GQTCLPVSEL+QGIRAV LHDRKGE+Y SVKLLM FE++
Sbjct: 538 HEYDMSEKDDFAGQTCLPVSELRQGIRAVSLHDRKGEKYNSVKLLMRFEYV 588
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720874|ref|NP_001236167.1| phosphatidylinositol-specific phospholipase C [Glycine max] gi|945039|gb|AAA74441.1| phosphatidylinositol-specific phospholipase C [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/604 (70%), Positives = 483/604 (79%), Gaps = 52/604 (8%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKE 61
SKQTY VCFC+RRRF +A +EAP +K++F++YSEN MT HL RFL+EVQ+++KA++E
Sbjct: 3 SKQTYSVCFCWRRRFKLALAEAPSEIKTLFEEYSENEFMTPSHLKRFLVEVQRQEKATEE 62
Query: 62 DAQAIIDSLRELKHLNIFQRRG--LNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
DAQAIIDS R F RRG LNLE FFKYLF D NPPL P+ VHHDMT P+SHYF
Sbjct: 63 DAQAIIDSFRH------FPRRGAGLNLETFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYF 116
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII AL++GVRVIELDIWPN+ KDN+DVLHG T+T PVE
Sbjct: 117 IYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNASKDNIDVLHGRTLTTPVE 176
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LI+CLRSIK++AFVASEYPVVITLEDHLTPDLQAKVAEMVT+T G++LFTP SE +KEFP
Sbjct: 177 LIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTETFGDLLFTPNSESVKEFP 236
Query: 240 SPESLKRRIIISTKPPKEYLEAKE---------EKEKENDSQRGKGSADEEAWGKEVPNL 290
SPESLK+RIIISTKPPKEYLEAKE EKEK +DSQ GK ++EAWGKEVP+L
Sbjct: 237 SPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSQHGKALGEDEAWGKEVPSL 296
Query: 291 KSLNNSACDKDDFDGGVD-NDEE--DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKV 347
K + D D++ D NDEE D DKS HNEAPEYR+LIAIHAGKPKGGL ECLKV
Sbjct: 297 KG--GTIEDYKDYNVDEDLNDEEEFDESDKSHHNEAPEYRRLIAIHAGKPKGGLAECLKV 354
Query: 348 DPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQ 407
DPDKVRRLSLSEQQLE A +G IVRFTQRN+LR+YPKG R+DSSNYNPLIGW HGAQ
Sbjct: 355 DPDKVRRLSLSEQQLEKAAINHGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQ 414
Query: 408 MVAFNMQ------------------------------TGPHNEVFDPKVKLPAKKTLKVT 437
MVAFNMQ TGP +EVF+PK KLP K TLKVT
Sbjct: 415 MVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFNPKAKLPVKTTLKVT 474
Query: 438 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP 497
VYMGEGWYYDF HTHFD YSPPDFY RVGIAGVP DT+MK+TK +EDNW+P+WNE FEFP
Sbjct: 475 VYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIEDNWLPTWNEVFEFP 534
Query: 498 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMH 557
L+VPELALLRIEVHEYDMSEKDDFGGQ CLP+ EL+ GIRA+PLH +KG++Y +VKLLM
Sbjct: 535 LTVPELALLRIEVHEYDMSEKDDFGGQACLPIWELRSGIRAIPLHSQKGDKYNTVKLLMR 594
Query: 558 FEFI 561
FEFI
Sbjct: 595 FEFI 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2853039|emb|CAA63954.1| phosphoinositide-specific phospholipase C [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/591 (69%), Positives = 480/591 (81%), Gaps = 36/591 (6%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQ+YRVCFCFRRRF V A+EAP VK++F++YS+NG M+ ++LHRFLIEVQKE+ A+
Sbjct: 1 MSKQSYRVCFCFRRRFRVLAAEAPADVKNLFNRYSDNGVMSAENLHRFLIEVQKEENATL 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDA AI+++L +LK LNIF RRGL+L+AFFKYLF DINPPL+ +H DM AP+SHYFI
Sbjct: 61 EDAHAIMNNLHDLKILNIFHRRGLHLDAFFKYLFADINPPLNSKLGIHQDMNAPLSHYFI 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII+AL +GVRVIELDIWPNS KD+V+VLHGGT+T PV L
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIQALHRGVRVIELDIWPNSAKDDVEVLHGGTLTTPVAL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF SEYPVVITLEDHLT DLQAK AEM+TQT G++LF+ S CLKEFPS
Sbjct: 181 IKCLKSIKEHAFTVSEYPVVITLEDHLTTDLQAKTAEMITQTFGDMLFSSDS-CLKEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRR++ISTKPPKEYL+AKE E + +G D EAWG+EV ++K+ N DK
Sbjct: 240 PESLKRRVLISTKPPKEYLQAKE--VNETGAMKGTDQTDTEAWGREVSDIKARYN---DK 294
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DD D G +D ++ D SQ N APEYR+LIAIHAGK KGGL + L+VDPDKVRRLSLSEQ
Sbjct: 295 DDSDEGEADDSDEEDPTSQQNTAPEYRRLIAIHAGKGKGGLSDWLRVDPDKVRRLSLSEQ 354
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ------ 414
+L AV T+G +I+RFTQRN+LRIYPKGIR DSSNYNP W+HGAQMVAFNMQ
Sbjct: 355 ELGKAVVTHGKEIIRFTQRNILRIYPKGIRFDSSNYNPFNAWTHGAQMVAFNMQGYGRSL 414
Query: 415 ------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 450
GP+NEVFDP+ LP K TLKVTV+MGEGWYYDF H
Sbjct: 415 WLMHGMFRGNGGCGYVKKPDILLKAGPNNEVFDPEANLPVKTTLKVTVFMGEGWYYDFEH 474
Query: 451 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510
THFDAYSPPDFYAR+GIAGV AD VMKKTKTLEDNWIP+W+E+FEFPL+VPELALLR+EV
Sbjct: 475 THFDAYSPPDFYARIGIAGVDADIVMKKTKTLEDNWIPTWDEQFEFPLTVPELALLRVEV 534
Query: 511 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
HEYDMSEKDDF GQTCLPVSEL+QGIRAVPLH+RKGE+Y SVKLL+ FEFI
Sbjct: 535 HEYDMSEKDDFAGQTCLPVSELRQGIRAVPLHNRKGEKYNSVKLLLRFEFI 585
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 561 | ||||||
| TAIR|locus:2103437 | 581 | PLC2 "phospholipase C 2" [Arab | 0.718 | 0.693 | 0.645 | 3e-203 | |
| TAIR|locus:2082018 | 584 | AT3G55940 [Arabidopsis thalian | 0.720 | 0.691 | 0.602 | 1.2e-190 | |
| TAIR|locus:504956034 | 613 | AT2G40116 [Arabidopsis thalian | 0.664 | 0.608 | 0.532 | 4.6e-163 | |
| TAIR|locus:2178848 | 597 | PLC4 "phosphatidylinositol-spe | 0.682 | 0.641 | 0.516 | 5.6e-154 | |
| TAIR|locus:2178803 | 561 | PLC1 "phospholipase C1" [Arabi | 0.491 | 0.491 | 0.478 | 1e-145 | |
| TAIR|locus:2121239 | 564 | PLC1 "phospholipase C1" [Arabi | 0.406 | 0.404 | 0.543 | 1.3e-139 | |
| TAIR|locus:2178833 | 578 | PLC5 "phosphatidylinositol-spe | 0.925 | 0.897 | 0.513 | 9.2e-139 | |
| TAIR|locus:2099530 | 531 | PLC8 "phosphatidylinositol-spe | 0.404 | 0.427 | 0.382 | 7.5e-86 | |
| TAIR|locus:2075696 | 531 | PLC9 "AT3G47220" [Arabidopsis | 0.354 | 0.374 | 0.415 | 1.5e-66 | |
| UNIPROTKB|E1C3D7 | 760 | PLCD1 "Uncharacterized protein | 0.392 | 0.289 | 0.343 | 3.6e-55 |
| TAIR|locus:2103437 PLC2 "phospholipase C 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1333 (474.3 bits), Expect = 3.0e-203, Sum P(2) = 3.0e-203
Identities = 268/415 (64%), Positives = 309/415 (74%)
Query: 1 MSKQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+V ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHKVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGSADEEAWGKEVPNLKSLNNSACX 299
SP SLKRRIIIST Q+GK DEE WG+EVP+ N S
Sbjct: 235 SPNSLKRRIIISTKPPKEYKEGKDVEVV----QKGKDLGDEEVWGREVPSFIQRNKSEAK 290
Query: 300 XXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
+DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 291 DDLDGNDDDDDDD-DEDKSKINAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQ
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQ 404
|
|
| TAIR|locus:2082018 AT3G55940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1235 (439.8 bits), Expect = 1.2e-190, Sum P(2) = 1.2e-190
Identities = 253/420 (60%), Positives = 300/420 (71%)
Query: 1 MSKQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+V S AP +K++FD YS+ G MT D L RFLI+VQK+DKA+K
Sbjct: 1 MSKQTYKVCFCFRRRYRHTVSVAPAEIKTLFDNYSDKGLMTTDLLLRFLIDVQKQDKATK 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ I+++ L H R GL+L+AFFKYLF N PLS V H DM AP+SHYFI
Sbjct: 61 EEAQDIVNASSSLLH-----RNGLHLDAFFKYLFAVTNSPLSSLEV-HQDMDAPLSHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCS++PII AL+KGVRVIELDIWPNS +D +DVLHG T+T+PVEL
Sbjct: 115 YTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHGRTLTSPVEL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCLR+I+E+AF S+YPVV+TLEDHLTP LQAKVAEMVT GE+LFTP S ECLKEFP
Sbjct: 175 IKCLRAIREHAFDVSDYPVVVTLEDHLTPKLQAKVAEMVTDIFGEMLFTPPSGECLKEFP 234
Query: 240 SPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGSADEEAWGKEVPNL----KSLN- 294
SP LK+RI+IST ++G+ D+E WG+EVP+ +S++
Sbjct: 235 SPAFLKKRIMISTKPPKEYKAATDDDLV----KKGRDLGDKEVWGREVPSFIRRDRSVDK 290
Query: 295 NSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRR 354
N + DDK + N PEY+ LIAI AGKPKGG+ ECLKVDPDKVRR
Sbjct: 291 NDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLIAIEAGKPKGGITECLKVDPDKVRR 350
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LSLSE+QLE A Y IVRFTQRNLLR+YPKG R+ SSNYNPLI WSHGAQMVAFNMQ
Sbjct: 351 LSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFNMQ 410
|
|
| TAIR|locus:504956034 AT2G40116 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1007 (359.5 bits), Expect = 4.6e-163, Sum P(2) = 4.6e-163
Identities = 205/385 (53%), Positives = 260/385 (67%)
Query: 32 DQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFQRRGLNLEAFF 90
D G M + L FL + + + +AQ +ID +R H+ F R GL+L+ FF
Sbjct: 62 DGDGSTGVMGAEQLCSFLDD--HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFF 119
Query: 91 KYLF-GDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKG 149
+LF D+NPP+ TP VH DMTAP+SHYFIYTGHNSYLTGNQL+SDCS+VP+I+ALQ+G
Sbjct: 120 NFLFYDDLNPPI--TPHVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPVIKALQRG 177
Query: 150 VRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTP 209
VRVIELD+WPNS +++VLHG T+T PV L+KCL+SI++YAF +S YPV+ITLEDHLTP
Sbjct: 178 VRVIELDLWPNSTGTDINVLHGRTLTTPVPLMKCLKSIRDYAFSSSPYPVIITLEDHLTP 237
Query: 210 DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXXXXXXXXXN 269
DLQAKVAEM TQ G++L+ P S+ L EFPSP SL RIIIST
Sbjct: 238 DLQAKVAEMATQIFGQMLYYPESDSLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQK 297
Query: 270 DSQRGKGSADEEAWGKEVPNLKSLNNSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKL 329
D+ S DE +E+ L+S+ D+++ ++ P Y++L
Sbjct: 298 DNNVSPSSEDETPRTEEIQTLESM------LFDQDFESKSDSDQEDEEASEDQKPAYKRL 351
Query: 330 IAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGI 389
I IHAGKPKG +KE +KV DKVRRLSLSEQ+L+ + D+VRFTQRNLLRIYPKG
Sbjct: 352 ITIHAGKPKGTVKEEMKVVVDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGT 411
Query: 390 RVDSSNYNPLIGWSHGAQMVAFNMQ 414
R +SSNY PLIGW+HGAQM+AFNMQ
Sbjct: 412 RFNSSNYKPLIGWTHGAQMIAFNMQ 436
|
|
| TAIR|locus:2178848 PLC4 "phosphatidylinositol-speciwc phospholipase C4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 980 (350.0 bits), Expect = 5.6e-154, Sum P(2) = 5.6e-154
Identities = 204/395 (51%), Positives = 264/395 (66%)
Query: 27 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFQRRGL 84
V+ +F++Y+E M+ + L + + E E + S E+A+ I+D LR H+ F RR L
Sbjct: 31 VRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNL 90
Query: 85 NLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPII 143
L+ F YLF D+NPP++ VH +M AP+SHYFI+TGHNSYLTGNQL+S+CS++PI
Sbjct: 91 TLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIA 148
Query: 144 RALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITL 203
AL++GVRV+ELD+WP D+V V HG T+T V+L KCL SIK AF S+YPV+ITL
Sbjct: 149 DALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKLGKCLESIKANAFAISKYPVIITL 207
Query: 204 EDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXXXX 263
EDHLTP LQ KVA+M+TQT G++L+ S+ +EFPSPE LK +I+IST
Sbjct: 208 EDHLTPKLQFKVAKMITQTFGDMLYYHDSQGCQEFPSPEELKEKILISTKPPKEYLEAND 267
Query: 264 XXXXXNDSQRGKGSADEEAWGKEVPNLKS----LNNSACXXXXXXXXXXXXXXXSDDKSQ 319
N ++GK S DE+ WGKE +L S L+ D S
Sbjct: 268 TKEKDN-GEKGKDS-DEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCESDTSC 325
Query: 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQR 379
+APEY++LIAIHAGKPKGGL+ LKVDP+K+RRLSLSEQ LE AV +YG D++RFTQ+
Sbjct: 326 QLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQK 385
Query: 380 NLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
N LRIYPKG R +SSNY P IGW GAQM+AFNMQ
Sbjct: 386 NFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQ 420
|
|
| TAIR|locus:2178803 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 643 (231.4 bits), Expect = 1.0e-145, Sum P(3) = 1.0e-145
Identities = 134/280 (47%), Positives = 175/280 (62%)
Query: 3 KQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKED 62
K++++V V +SE P+ +K++F YS++ M+ D + RF+I+VQ E A D
Sbjct: 2 KESFKVCFCCVRNFKVKSSEPPEEIKNLFHDYSQDDRMSADEMLRFVIQVQGETHA---D 58
Query: 63 AQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYT 122
+ D LKH +F RG++LE F++YL D N PL T V DM P+SHYF+YT
Sbjct: 59 INYVKDIFHRLKHHGVFHPRGIHLEGFYRYLLSDFNSPLPLTREVWQDMNQPLSHYFLYT 118
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
GHNSYLTGNQLNS+ S PI++AL+ GVRVIELD+WPNS +V HGGT+T+ +L K
Sbjct: 119 GHNSYLTGNQLNSNSSIEPIVKALRNGVRVIELDLWPNSSGKEAEVRHGGTLTSREDLQK 178
Query: 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
CL +KE AF S YPVV+TLEDHLTP LQ KVA+MV++T G LF E + FPSPE
Sbjct: 179 CLNVVKENAFQVSAYPVVLTLEDHLTPILQKKVAKMVSKTFGGSLFQCTDETTECFPSPE 238
Query: 243 SLKRRIIISTXXXXXXXXXXXXXXXXND-SQRGKGSADEE 281
SLK +I+IST D S R K +D E
Sbjct: 239 SLKNKILISTKPPKEYLQTQISKGSTTDESTRAKKISDAE 278
|
|
| TAIR|locus:2121239 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 629 (226.5 bits), Expect = 1.3e-139, Sum P(3) = 1.3e-139
Identities = 126/232 (54%), Positives = 164/232 (70%)
Query: 22 EAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQR 81
+ P ++K +F+ YS NG M+ D L RF+ EVQ E A + Q I S+ KH N+F
Sbjct: 21 QPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSV---KHHNVFHH 77
Query: 82 RGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDV 140
GL +L AF++YLF D N PL + VHHDM AP+SHYF+YTGHNSYLTGNQ+NS S
Sbjct: 78 HGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVE 137
Query: 141 PIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVV 200
PI++AL+KGV+VIELD+WPN + +V HG T+T+ +L KCL +IK+ AF S+YPV+
Sbjct: 138 PIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQKCLTAIKDNAFHVSDYPVI 197
Query: 201 ITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIIST 252
ITLEDHL P LQA+VA+M+T+T +LF SE K FPSPE LK +I+IST
Sbjct: 198 ITLEDHLPPKLQAQVAKMLTKTYRGMLFRRVSESFKHFPSPEELKGKILIST 249
|
|
| TAIR|locus:2178833 PLC5 "phosphatidylinositol-speciwc phospholipase C5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1358 (483.1 bits), Expect = 9.2e-139, P = 9.2e-139
Identities = 294/572 (51%), Positives = 368/572 (64%)
Query: 24 PDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLR-ELKHLNIFQR 81
P V + F +Y+E + MT + L RFL+EVQ E + DA+ II+ + E H+ F R
Sbjct: 26 PQDVVTAFVEYTEGRSHMTAEQLCRFLVEVQDETEVLVSDAEKIIERITCERHHITKFLR 85
Query: 82 RGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDV 140
LNL+ FF +LF D +N P+ VH DM +P+SHYFIYT HNSYLTGNQ+NS+CSDV
Sbjct: 86 HTLNLDDFFSFLFSDDLNHPIDSK--VHQDMASPLSHYFIYTSHNSYLTGNQINSECSDV 143
Query: 141 PIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVV 200
P+I+AL++GVR +ELD+WPNS KD++ VLHG T PVEL+KCLRSIKE+AF AS YPV+
Sbjct: 144 PLIKALKRGVRALELDMWPNSTKDDILVLHGWAWTPPVELVKCLRSIKEHAFYASAYPVI 203
Query: 201 ITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXX 260
+TLEDHLTPDLQAK AEM+ + ++++ P + LKEFPSPE LK +I+IST
Sbjct: 204 LTLEDHLTPDLQAKAAEMMKEIFMDMVYFPEAGGLKEFPSPEDLKYKIVISTKPPKGSLR 263
Query: 261 XXXXXXXXNDSQRGKG-SADEEAWGKEVPNLKSLNNSACXXXXXXXXXXXXXXXSDDKSQ 319
+ SAD+E +E K+ + D +S
Sbjct: 264 KDKDSESDASGKASSDVSADDEKTEEETSEAKNEEDGF-----------------DQESS 306
Query: 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQR 379
+ + Y +LI I +G K GLKE L +D VRRLSL EQ+ + A YG ++++FTQ+
Sbjct: 307 NLDFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRLSLREQKFKKATEMYGTEVIKFTQK 366
Query: 380 NLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ---------------TG-------P 417
NLLRIYPK RV+SSNY P GW +GAQMVAFNMQ G P
Sbjct: 367 NLLRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQGYGRALWMMHGMFRGNGGCGYVKKP 426
Query: 418 -----HN---EVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAG 469
+N EVF+PK KLP KKTLKV VYMG+GW F T F+ +S P+FY RVGI G
Sbjct: 427 DFMMNNNLSGEVFNPKAKLPIKKTLKVKVYMGKGWDSGFQRTCFNTWSSPNFYTRVGITG 486
Query: 470 VPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPV 529
V D VMKKTK + W P WNEEFEF L+VPELALLRIEVH+Y+M EKDDF GQTCLPV
Sbjct: 487 VRGDKVMKKTKKEQKTWEPFWNEEFEFQLTVPELALLRIEVHDYNMPEKDDFSGQTCLPV 546
Query: 530 SELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
SEL+QGIR+VPL+DRKGER SV LLM F F+
Sbjct: 547 SELRQGIRSVPLYDRKGERLVSVTLLMRFHFL 578
|
|
| TAIR|locus:2099530 PLC8 "phosphatidylinositol-speciwc phospholipase C8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 396 (144.5 bits), Expect = 7.5e-86, Sum P(3) = 7.5e-86
Identities = 91/238 (38%), Positives = 137/238 (57%)
Query: 21 SEAPDAVKSMFDQ----YSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKH- 75
+ +PD + F Y ++ T+ L L ++ED A A+ I L K
Sbjct: 12 ANSPDLILQFFGNEFHGYGDDMPETLRRLTELLGYEKEEDGAGMNAAKKIAAELNRRKDD 71
Query: 76 LNIFQR-RGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQL 133
+ F+R R L L+ ++LF +NPP+ VHHDM AP+SHYFI+T NSY TGN
Sbjct: 72 IPAFRRLRCLELDQLNEFLFSTKLNPPIGDQ--VHHDMHAPLSHYFIHTSLNSYFTGNVF 129
Query: 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFV 193
S +PII AL++GVRV+ELD+WP+ + ++ V P++L +CL SIKE+AF
Sbjct: 130 GK-YSILPIIEALEQGVRVVELDLWPDGR-GSICVRPSWNFEKPLKLQECLDSIKEHAFT 187
Query: 194 ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIIS 251
YP++IT +D L P+LQ+K +M+ QT +++ L+ FPSP+ L+ +I+IS
Sbjct: 188 KCTYPLIITFKDGLKPELQSKATQMIQQTFNHMVYHHDPHSLEVFPSPQQLRNKILIS 245
|
|
| TAIR|locus:2075696 PLC9 "AT3G47220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 368 (134.6 bits), Expect = 1.5e-66, Sum P(2) = 1.5e-66
Identities = 88/212 (41%), Positives = 132/212 (62%)
Query: 49 LIEVQKEDKASKEDAQAIIDSLRELKH--LNIFQRRGLN---LEAFFKYLFG-DINPPLS 102
L++ +K++ + +A ID RELK +I + R L L ++LF ++NPP+S
Sbjct: 44 LLDTEKDEDGAGLNAAEQID--RELKSRKCDILKFRNLTILELPHLNEFLFSTELNPPIS 101
Query: 103 PTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDV-PIIRALQKGVRVIELDIWPNS 161
V H DM AP+SHYFI+T SY TGN + + PII AL++GVRV+ELD+ P
Sbjct: 102 DQ-VRHRDMNAPLSHYFIHTSLKSYFTGNNVFGRLYSIEPIIDALKQGVRVVELDLLPFG 160
Query: 162 KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASE-YPVVITLEDHLTPDLQAKVAEMVT 220
K D + V P+EL +CL +IK++AF + YPV+IT++D L PDLQ+KV +M+
Sbjct: 161 K-DGICVRPKWNFEKPLELQECLDAIKQHAFTPTRSYPVIITIKDSLKPDLQSKVTQMID 219
Query: 221 QTLGEILFTPG-SECLKEFPSPESLKRRIIIS 251
QT G++++ + L+EFPSP L+ +I+IS
Sbjct: 220 QTFGDMVYHEDPQQSLEEFPSPAELQNKILIS 251
|
|
| UNIPROTKB|E1C3D7 PLCD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 339 (124.4 bits), Expect = 3.6e-55, Sum P(3) = 3.6e-55
Identities = 78/227 (34%), Positives = 124/227 (54%)
Query: 27 VKSMFDQYSE-NGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ ++F +YS+ G M+ +L RFL E Q+E+ A A +I + +R +
Sbjct: 214 IDTIFQKYSDAEGLMSCQNLVRFLYETQQEEDAVVA-APPLIQRYEPSERAK--KRNAMT 270
Query: 86 LEAFFKYLFGDINPPLSPTP-VVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR 144
+ F YL D + + V+ DMT P+SHYF+ + HN+YL +QL S IR
Sbjct: 271 KDGFLMYLLSDDGNIFNTSHRKVYQDMTQPLSHYFVSSSHNTYLMDDQLTGPSSTEAYIR 330
Query: 145 ALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLE 204
AL KG R +ELD W + + + HG T+T+ + +++IK YAF S YPV+I+LE
Sbjct: 331 ALTKGCRCVELDCWDGPNSEPI-IYHGYTLTSKILFSDVIKAIKNYAFKTSPYPVIISLE 389
Query: 205 DHLTPDLQAKVAEMVTQTLGEILFT-PGSECLKEFPSPESLKRRIII 250
+H + + Q +A+ +T L ++L P +FPSPE LK +I++
Sbjct: 390 NHCSLEQQKVMAQHMTTILQDMLLVAPIDGSKSQFPSPEQLKGKILV 436
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q39033 | PLCD2_ARATH | 3, ., 1, ., 4, ., 1, 1 | 0.6891 | 0.9803 | 0.9466 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 561 | |||
| PLN02222 | 581 | PLN02222, PLN02222, phosphoinositide phospholipase | 0.0 | |
| PLN02952 | 599 | PLN02952, PLN02952, phosphoinositide phospholipase | 0.0 | |
| PLN02228 | 567 | PLN02228, PLN02228, Phosphoinositide phospholipase | 0.0 | |
| PLN02230 | 598 | PLN02230, PLN02230, phosphoinositide phospholipase | 0.0 | |
| PLN02223 | 537 | PLN02223, PLN02223, phosphoinositide phospholipase | 1e-107 | |
| cd08599 | 228 | cd08599, PI-PLCc_plant, Catalytic domain of plant | 4e-84 | |
| pfam00388 | 145 | pfam00388, PI-PLC-X, Phosphatidylinositol-specific | 1e-66 | |
| cd08558 | 226 | cd08558, PI-PLCc_eukaryota, Catalytic domain of eu | 3e-65 | |
| smart00148 | 143 | smart00148, PLCXc, Phospholipase C, catalytic doma | 6e-55 | |
| cd08598 | 231 | cd08598, PI-PLC1c_yeast, Catalytic domain of putat | 2e-43 | |
| cd00275 | 128 | cd00275, C2_PLC_like, C2 domain present in Phospho | 2e-41 | |
| smart00149 | 115 | smart00149, PLCYc, Phospholipase C, catalytic doma | 3e-38 | |
| cd08593 | 257 | cd08593, PI-PLCc_delta, Catalytic domain of metazo | 4e-38 | |
| cd08597 | 260 | cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of | 6e-37 | |
| cd08592 | 229 | cd08592, PI-PLCc_gamma, Catalytic domain of metazo | 7e-37 | |
| cd08591 | 257 | cd08591, PI-PLCc_beta, Catalytic domain of metazoa | 2e-33 | |
| cd08594 | 227 | cd08594, PI-PLCc_eta, Catalytic domain of metazoan | 2e-33 | |
| cd08629 | 258 | cd08629, PI-PLCc_delta1, Catalytic domain of metaz | 5e-33 | |
| cd08630 | 258 | cd08630, PI-PLCc_delta3, Catalytic domain of metaz | 4e-31 | |
| cd08627 | 229 | cd08627, PI-PLCc_gamma1, Catalytic domain of metaz | 2e-30 | |
| cd08626 | 257 | cd08626, PI-PLCc_beta4, Catalytic domain of metazo | 1e-29 | |
| cd08628 | 254 | cd08628, PI-PLCc_gamma2, Catalytic domain of metaz | 3e-28 | |
| cd08595 | 257 | cd08595, PI-PLCc_zeta, Catalytic domain of metazoa | 1e-27 | |
| cd08633 | 254 | cd08633, PI-PLCc_eta2, Catalytic domain of metazoa | 2e-27 | |
| cd08631 | 258 | cd08631, PI-PLCc_delta4, Catalytic domain of metaz | 1e-26 | |
| cd08599 | 228 | cd08599, PI-PLCc_plant, Catalytic domain of plant | 1e-25 | |
| cd08596 | 254 | cd08596, PI-PLCc_epsilon, Catalytic domain of meta | 3e-25 | |
| cd08632 | 253 | cd08632, PI-PLCc_eta1, Catalytic domain of metazoa | 9e-25 | |
| cd08558 | 226 | cd08558, PI-PLCc_eukaryota, Catalytic domain of eu | 1e-24 | |
| cd08624 | 261 | cd08624, PI-PLCc_beta2, Catalytic domain of metazo | 6e-24 | |
| pfam00387 | 117 | pfam00387, PI-PLC-Y, Phosphatidylinositol-specific | 6e-23 | |
| cd08625 | 258 | cd08625, PI-PLCc_beta3, Catalytic domain of metazo | 1e-21 | |
| cd08623 | 258 | cd08623, PI-PLCc_beta1, Catalytic domain of metazo | 9e-21 | |
| pfam00168 | 85 | pfam00168, C2, C2 domain | 3e-20 | |
| smart00239 | 101 | smart00239, C2, Protein kinase C conserved region | 4e-20 | |
| cd00137 | 274 | cd00137, PI-PLCc, Catalytic domain of prokaryotic | 6e-20 | |
| pfam09279 | 83 | pfam09279, efhand_like, Phosphoinositide-specific | 2e-19 | |
| cd08593 | 257 | cd08593, PI-PLCc_delta, Catalytic domain of metazo | 2e-15 | |
| cd08594 | 227 | cd08594, PI-PLCc_eta, Catalytic domain of metazoan | 4e-15 | |
| cd08598 | 231 | cd08598, PI-PLC1c_yeast, Catalytic domain of putat | 2e-14 | |
| cd08591 | 257 | cd08591, PI-PLCc_beta, Catalytic domain of metazoa | 3e-13 | |
| cd08631 | 258 | cd08631, PI-PLCc_delta4, Catalytic domain of metaz | 7e-13 | |
| cd08592 | 229 | cd08592, PI-PLCc_gamma, Catalytic domain of metazo | 4e-12 | |
| cd08626 | 257 | cd08626, PI-PLCc_beta4, Catalytic domain of metazo | 8e-12 | |
| cd08595 | 257 | cd08595, PI-PLCc_zeta, Catalytic domain of metazoa | 9e-12 | |
| cd08596 | 254 | cd08596, PI-PLCc_epsilon, Catalytic domain of meta | 9e-12 | |
| cd08628 | 254 | cd08628, PI-PLCc_gamma2, Catalytic domain of metaz | 2e-11 | |
| cd08633 | 254 | cd08633, PI-PLCc_eta2, Catalytic domain of metazoa | 3e-11 | |
| cd08632 | 253 | cd08632, PI-PLCc_eta1, Catalytic domain of metazoa | 3e-11 | |
| cd08630 | 258 | cd08630, PI-PLCc_delta3, Catalytic domain of metaz | 2e-10 | |
| cd08629 | 258 | cd08629, PI-PLCc_delta1, Catalytic domain of metaz | 6e-10 | |
| cd08624 | 261 | cd08624, PI-PLCc_beta2, Catalytic domain of metazo | 6e-10 | |
| cd08597 | 260 | cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of | 9e-10 | |
| cd08623 | 258 | cd08623, PI-PLCc_beta1, Catalytic domain of metazo | 1e-09 | |
| cd08627 | 229 | cd08627, PI-PLCc_gamma1, Catalytic domain of metaz | 2e-09 | |
| cd08625 | 258 | cd08625, PI-PLCc_beta3, Catalytic domain of metazo | 2e-09 | |
| cd00030 | 102 | cd00030, C2, C2 domain | 2e-09 | |
| cd08557 | 271 | cd08557, PI-PLCc_bacteria_like, Catalytic domain o | 6e-08 | |
| cd04025 | 123 | cd04025, C2B_RasA1_RasA4, C2 domain second repeat | 4e-07 | |
| cd08555 | 179 | cd08555, PI-PLCc_GDPD_SF, Catalytic domain of phos | 6e-07 | |
| cd04026 | 131 | cd04026, C2_PKC_alpha_gamma, C2 domain in Protein | 3e-06 | |
| cd04040 | 115 | cd04040, C2D_Tricalbin-like, C2 domain fourth repe | 8e-06 | |
| cd08675 | 137 | cd08675, C2B_RasGAP, C2 domain second repeat of Ra | 6e-05 | |
| COG5038 | 1227 | COG5038, COG5038, Ca2+-dependent lipid-binding pro | 7e-05 | |
| cd04042 | 121 | cd04042, C2A_MCTP_PRT, C2 domain first repeat foun | 4e-04 | |
| cd04032 | 127 | cd04032, C2_Perforin, C2 domain of Perforin | 9e-04 | |
| cd08373 | 127 | cd08373, C2A_Ferlin, C2 domain first repeat in Fer | 0.001 | |
| cd08391 | 121 | cd08391, C2A_C2C_Synaptotagmin_like, C2 domain fir | 0.002 | |
| cd04038 | 145 | cd04038, C2_ArfGAP, C2 domain present in Arf GTPas | 0.002 | |
| cd00276 | 134 | cd00276, C2B_Synaptotagmin, C2 domain second repea | 0.002 | |
| cd04030 | 127 | cd04030, C2C_KIAA1228, C2 domain third repeat pres | 0.003 | |
| cd04024 | 128 | cd04024, C2A_Synaptotagmin-like, C2 domain first r | 0.004 | |
| cd08384 | 133 | cd08384, C2B_Rabphilin_Doc2, C2 domain second repe | 0.004 |
| >gnl|CDD|177868 PLN02222, PLN02222, phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
Score = 865 bits (2235), Expect = 0.0
Identities = 406/592 (68%), Positives = 470/592 (79%), Gaps = 42/592 (7%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRRF ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSDKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP SLK+RIIISTKPPKEY E K+++ Q+GK DEE WG+EVP+ N S D
Sbjct: 235 SPNSLKKRIIISTKPPKEYKEGKDDEV----VQKGKDLGDEEVWGREVPSFIQRNKSV-D 289
Query: 300 KDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
K+D +G D+D++D +DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 290 KNDSNGDDDDDDDDGEDKSKKNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ----- 414
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQ
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRS 409
Query: 415 -------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 449
+G +++FDPK LP K TL+VT+YMGEGWY+DF
Sbjct: 410 LWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFR 469
Query: 450 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 509
HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNWIP+W+E FEFPL+VPELALLR+E
Sbjct: 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLE 529
Query: 510 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
VHEYDMSEKDDFGGQTCLPV EL QGIRA PLH RKGE+YKSVKLL+ EF+
Sbjct: 530 VHEYDMSEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581
|
Length = 581 |
| >gnl|CDD|178538 PLN02952, PLN02952, phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 745 bits (1924), Expect = 0.0
Identities = 340/594 (57%), Positives = 418/594 (70%), Gaps = 41/594 (6%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKAS 59
Y++ F R+F + +E PD VK +F ++S G M D L RFL+ Q E +
Sbjct: 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCT 73
Query: 60 KEDAQAIIDS-LRELKHLNIFQRRGLNLEAFFKYL-FGDINPPLSPTPVVHHDMTAPVSH 117
+AQ I++ + H+ + R GLNL+ FF +L + D+N P+ TP VHHDMTAP+SH
Sbjct: 74 LAEAQRIVEEVINRRHHVTRYTRHGLNLDDFFHFLLYDDLNGPI--TPQVHHDMTAPLSH 131
Query: 118 YFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAP 177
YFIYTGHNSYLTGNQL+SDCS+VPI++ALQ+GVRVIELD+WP S KD + VLHG T+T P
Sbjct: 132 YFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPGSTKDEILVLHGRTLTTP 191
Query: 178 VELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKE 237
V LIKCL+SI++YAF +S YPV+ITLEDHLTPDLQAKVAEM TQ G++L+ P S+ L +
Sbjct: 192 VPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251
Query: 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA 297
FPSPESLK RIIISTKPPKEYLE+ + + + +E L+S+
Sbjct: 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEETEEAQTLESMLFEQ 311
Query: 298 CDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ D D+D++ D+KS + P Y++LI IHAGKPKG LK+ +KV DKVRRLSL
Sbjct: 312 ----EADSRSDSDQD--DNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSL 365
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ--- 414
SEQ+LE A T G D+VRFTQRN+LRIYPKG R+ SSNY PLIGW HGAQM+AFNMQ
Sbjct: 366 SEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSSNYKPLIGWMHGAQMIAFNMQGYG 425
Query: 415 ---------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYD 447
G H+EVFDPK KLP KKTLKV VY+G+GW D
Sbjct: 426 KSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDGWRLD 485
Query: 448 FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 507
F HTHFD+YSPPDFY ++ I GVPAD KKTK +EDNW P+WNEEF FPL+VPELALLR
Sbjct: 486 FSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLR 545
Query: 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
IEV EYDMSEKDDFGGQTCLPVSEL+ GIR+VPLHD+KGE+ K+V+LLM F F+
Sbjct: 546 IEVREYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599
|
Length = 599 |
| >gnl|CDD|177873 PLN02228, PLN02228, Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 632 bits (1631), Expect = 0.0
Identities = 293/585 (50%), Positives = 371/585 (63%), Gaps = 57/585 (9%)
Query: 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKED 62
++++VCFC R F E P ++K +F+ YS NG M+ D L RF+ EVQ E A
Sbjct: 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHA---G 58
Query: 63 AQAIIDSLRELKHLNIFQRRGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIY 121
+ D +KH N+F GL +L AF++YLF D N PL + VHHDM AP+SHYF+Y
Sbjct: 59 LDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVY 118
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
TGHNSYLTGNQ+NS S PI++AL+KGV+VIELD+WPN + +V HG T+T+ +L
Sbjct: 119 TGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQ 178
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCL +IK+ AF S+YPVVITLEDHL P+LQA+VA+M+T+T +LF SE K FPSP
Sbjct: 179 KCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSP 238
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
E LK +I+ISTKPPKEYLE+K + + E +W + + N
Sbjct: 239 EELKNKILISTKPPKEYLESKTVQTTRTPT------VKETSWKR----VADAENKI---- 284
Query: 302 DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQ 361
EE D++S EA YR LIAIHA K LK+CL DP+K R+S+ EQ
Sbjct: 285 --------LEEYKDEES---EAVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQW 333
Query: 362 LENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTG----- 416
LE V T G D+VRFTQRNL+RIYPKG RVDSSNY+P +GW+HGAQMVAFNMQ
Sbjct: 334 LETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLW 393
Query: 417 ----------------------PHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFD 454
+ +FDP +LP K TLKV +Y GEGW DF THFD
Sbjct: 394 IMQGMFRANGGCGYVKKPRILLDEHTLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTHFD 453
Query: 455 AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEY 513
YSPPDF+ ++GIAGVP DTV +T+T D W P W N+EF F L VPELALL +V +Y
Sbjct: 454 QYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDY 513
Query: 514 DMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 558
D ++DF GQTCLP+ ELK G+RAV LHDR G+ YK+ +LL+ F
Sbjct: 514 DNDTQNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSF 558
|
Length = 567 |
| >gnl|CDD|177875 PLN02230, PLN02230, phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
Score = 608 bits (1568), Expect = 0.0
Identities = 319/595 (53%), Positives = 409/595 (68%), Gaps = 43/595 (7%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSE-NGTMTVDHLHRFLIEVQKED-KASKED 62
+Y+ C F R+F + S V+ +F++Y++ + M+ + L + + E + + S E+
Sbjct: 9 SYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEE 68
Query: 63 AQAIIDS-LRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFI 120
A+ I+D LR H+ F RR L L+ F YLF D+NPP++ VH +M AP+SHYFI
Sbjct: 69 AERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFI 126
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+S+CS++PI AL++GVRV+ELD+WP D+V V HG T+T V+L
Sbjct: 127 FTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKL 185
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
KCL SIK AF S+YPV+ITLEDHLTP LQ KVA+M+TQT G++L+ SE +EFPS
Sbjct: 186 GKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEFPS 245
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PE LK +I+ISTKPPKEYLEA + KEK+N ++GK S DE+ WGKE +L S +
Sbjct: 246 PEELKEKILISTKPPKEYLEANDAKEKDN-GEKGKDS-DEDVWGKEPEDLISTQSDLDKV 303
Query: 301 DDFDGGVDNDEED----SDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLS 356
++ D+E+ D S +APEY++LIAIHAGKPKGGL+ LKVDP+K+RRLS
Sbjct: 304 TSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLS 363
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ-- 414
LSEQ LE AV +YG D++RFTQ+N LRIYPKG R +SSNY P IGW GAQM+AFNMQ
Sbjct: 364 LSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQGY 423
Query: 415 ----------------------------TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYY 446
GP+ + F PK KKTLKV V MG+GW
Sbjct: 424 GRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDGWLL 483
Query: 447 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 506
DF THFD+YSPPDF+ RVGIAG P D VM+KTK D W P WN+EF FPL+VPELALL
Sbjct: 484 DFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALL 543
Query: 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561
R+EVHE+D++EKDDFGGQTCLPVSE++QGI AVPL +RKG +Y S +LLM FEF+
Sbjct: 544 RVEVHEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598
|
Length = 598 |
| >gnl|CDD|165867 PLN02223, PLN02223, phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 331 bits (850), Expect = e-107
Identities = 206/591 (34%), Positives = 296/591 (50%), Gaps = 101/591 (17%)
Query: 13 RRRFHVAASEAPDAVKSMF-DQYSENGTMTVDHLHRF--LIEVQKEDKASKEDAQAIIDS 69
R++F + + PD + + F +++ + L RF L++ +K++ + +A I
Sbjct: 4 RKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIA- 62
Query: 70 LRELKH----LNIFQR-RGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTG 123
ELK + F+ R L L+ ++LF ++NPP+ V HHDM AP+SHYFI+T
Sbjct: 63 -AELKRRKCDILAFRNLRCLELDHLNEFLFSTELNPPIGDQ-VRHHDMHAPLSHYFIHTS 120
Query: 124 HNSYLTGNQL-NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
SY TGN + S PII AL++GVRV+ELD+ P+ KD + V P+EL +
Sbjct: 121 LKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDG-KDGICVRPKWNFEKPLELQE 179
Query: 183 CLRSIKEYAFVASE-YPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFPS 240
CL +IKE+AF YP++IT +D L PDLQ+K +M+ QT G++++ L+EFPS
Sbjct: 180 CLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
P L+ +I+IS +PPKE L AK
Sbjct: 240 PAELQNKILISRRPPKELLYAK-------------------------------------- 261
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DGGV E + + Y+ L+ HA +P+G L++ L D +++
Sbjct: 262 -ADDGGVGVRNE--LEIQEGPADKNYQSLVGFHAVEPRGMLQKALTGKADDIQQ------ 312
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDS-SNYNPLIGWSHGAQMVA--------- 410
G Y DI+ FTQ+ LR PK + + Y P W HGAQ++A
Sbjct: 313 -----PGWYERDIISFTQKKFLRTRPKKKNLLINAPYKPQRAWMHGAQLIALSRKDDKEK 367
Query: 411 ---------------------FNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 449
F + GP VF P K LKV +YMG+GW DF
Sbjct: 368 LWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVVKILKVKIYMGDGWIVDF- 425
Query: 450 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 509
S PD Y R+ IAGVP D + KT + W P+W EEF FPL+ P+LAL+ E
Sbjct: 426 KKRIGRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFE 485
Query: 510 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560
V++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 486 VYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 536
|
Length = 537 |
| >gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 261 bits (668), Expect = 4e-84
Identities = 96/161 (59%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
HHDMTAP+SHYFI++ HNSYLTGNQL+S S PII AL +G RVIELD+WP + D +
Sbjct: 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGRGD-IC 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
VLHGGT+T PV+ C+++IKE AF ASEYPV+ITLE+HL+P+LQAK A+++ +TLG+ L
Sbjct: 60 VLHGGTLTKPVKFEDCIKAIKENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKL 119
Query: 228 FTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267
F P SE +EFPSPE LK +I+IS KPP E + K
Sbjct: 120 FYPDSEDLPEEFPSPEELKGKILISDKPPVIRNSLSETQLK 160
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228 |
| >gnl|CDD|215892 pfam00388, PI-PLC-X, Phosphatidylinositol-specific phospholipase C, X domain | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 1e-66
Identities = 66/146 (45%), Positives = 95/146 (65%), Gaps = 3/146 (2%)
Query: 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLH 170
M+ P+SHYFI + HN+YLTG+QL S I+AL +G R +ELD W + V H
Sbjct: 1 MSQPLSHYFISSSHNTYLTGDQLTGKSSVEAYIQALLRGCRCVELDCW-DGPDGEPVVYH 59
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTP 230
G T+T+ + L +IKEYAFV SEYPV+++LE+H +P+ QAK+AE++ + G++L+TP
Sbjct: 60 GYTLTSKIPFRDVLEAIKEYAFVTSEYPVILSLENHCSPEQQAKMAEILKEIFGDMLYTP 119
Query: 231 --GSECLKEFPSPESLKRRIIISTKP 254
E E PSPE LK +I++ K
Sbjct: 120 PLDDESSTELPSPEDLKGKILLKVKK 145
|
This associates with pfam00387 to form a single structural unit. Length = 145 |
| >gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 211 bits (541), Expect = 3e-65
Identities = 65/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YLTG+QL + S IRAL +G R +ELD W + V
Sbjct: 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +IKEYAFV S YPV+++LE+H + + Q K+A+++ + G+ L
Sbjct: 60 VYHGHTLTSKILFKDVIEAIKEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKP 254
T P E + PSPE LK +I+I K
Sbjct: 120 LTPPLDENPVQLPSPEQLKGKILIKGKK 147
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226 |
| >gnl|CDD|197543 smart00148, PLCXc, Phospholipase C, catalytic domain (part); domain X | Back alignment and domain information |
|---|
Score = 181 bits (462), Expect = 6e-55
Identities = 63/144 (43%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Query: 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLH 170
M P+SHYFI + HN+YLTG QL + S I+AL G R +ELD W + V + H
Sbjct: 1 MDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDAGCRCVELDCWDGPDGEPV-IYH 59
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTP 230
G T T P++L + L +IK++AFV S YPV+++LE+H +PD QAK+A+M + G++L+TP
Sbjct: 60 GHTFTLPIKLSEVLEAIKDFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTP 119
Query: 231 GSECLKE-FPSPESLKRRIIISTK 253
E PSPE L+ +I++ +
Sbjct: 120 PLTSSLEVLPSPEQLRGKILLKVR 143
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 143 |
| >gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 2e-43
Identities = 60/146 (41%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
D++ P++ YFI + HN+YL G QL D S IRALQ+G R +E+D+W + V V
Sbjct: 2 EDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDDGEPV-V 60
Query: 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T+ V R+IK+YAFV S YP++++LE H + Q ++ E++ +T G++L
Sbjct: 61 THGYTLTSSVPFRDVCRAIKKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLV 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTK 253
T P E PSPE L+ +I+I K
Sbjct: 121 TEPLDGLEDELPSPEELRGKILIKVK 146
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231 |
| >gnl|CDD|175974 cd00275, C2_PLC_like, C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 2e-41
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNWI-P 488
TL + + G+ P D S D Y V I G+PA D+ KTK +++N P
Sbjct: 1 PLTLTIKIISGQQL----PKPKGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNP 56
Query: 489 SWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 548
WNE FEF ++VPELA LR V++ D DDF GQ CLP+ L+QG R VPL D KGE
Sbjct: 57 VWNETFEFDVTVPELAFLRFVVYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEP 115
Query: 549 YKSVKLLMHFEF 560
+ L +H +
Sbjct: 116 LELSTLFVHIDI 127
|
PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-II topology. Length = 128 |
| >gnl|CDD|128454 smart00149, PLCYc, Phospholipase C, catalytic domain (part); domain Y | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 3e-38
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 329 LIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKG 388
L+ A + +P S SE + + + D VR+ QR L R+YPKG
Sbjct: 3 LVIYCAPVKFRSFESAESKNP-FYEMSSFSETKAKKLLKKSPTDFVRYNQRQLSRVYPKG 61
Query: 389 IRVDSSNYNPLIGWSHGAQMVAFNMQT 415
RVDSSNYNP + W+HG QMVA N QT
Sbjct: 62 TRVDSSNYNPQVFWNHGCQMVALNFQT 88
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 115 |
| >gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 4e-38
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YL +QL S IRAL+KG R +ELD W + +
Sbjct: 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPDGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + +++I+EYAF S YPV+++LE+H + + Q +A+ + LG+ L
Sbjct: 60 IYHGHTLTSKILFKDVIQAIREYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTK 253
T P L PSPE LK +I++ K
Sbjct: 120 LTQPLDGVLTALPSPEELKGKILVKGK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257 |
| >gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 6e-37
Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
DMT P+SHYFI + HN+YL +QL S +RALQ+G R +ELD W + V
Sbjct: 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPNGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + + +I EYAFVASEYP+++ +E+H + Q +A+ + + G+ L
Sbjct: 60 IYHGHTLTSKISFRSVIEAINEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE 263
+T P +E PSP LK +III K K KE
Sbjct: 120 YTEPPNEGESYLPSPHDLKGKIIIKGKKLKRRKLCKE 156
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiments show both, PRIP-1 and PRIP-2, are involved in InsP3-mediated calcium signaling pathway and GABA(A)receptor-mediated signaling pathway. In addition, PRIP-2 acts as a negative regulator of B-cell receptor signaling and immune responses. Length = 260 |
| >gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 7e-37
Identities = 64/162 (39%), Positives = 96/162 (59%), Gaps = 6/162 (3%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
DM P+SHY+I + HN+YLTG+QL+S+ S R L+ G R IELD W + +
Sbjct: 2 QDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPDGMPI-I 60
Query: 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T+ ++ + L++IKE+AFV SEYPV++++E+H + Q +A+ + G++L
Sbjct: 61 YHGHTLTSKIKFMDVLKTIKEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLL 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTKPPK----EYLEAKEEK 265
T P + PSP LKR+III K + E K EK
Sbjct: 121 TQPVDRNADQLPSPNQLKRKIIIKHKKLFYEMSSFPETKAEK 162
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229 |
| >gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 2e-33
Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR-ALQKGVRVIELDIWPNSKKDNV 166
+ DM P+SHYFI + HN+YLTG Q S V + R L G R IELD W +D
Sbjct: 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGK-SSVEMYRQVLLSGCRCIELDCWDGKGEDEE 59
Query: 167 DVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225
++ HG TM + + +I E AF SEYPV+++ E+H + QAK+AE + G+
Sbjct: 60 PIITHGKTMCTEILFKDVIEAIAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGD 119
Query: 226 ILFT---------PGSECLKEFPSPESLKRRIIISTK 253
+L T PG PSP LKR+I+I K
Sbjct: 120 LLLTEPLEKYPLEPG----VPLPSPNDLKRKILIKNK 152
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257 |
| >gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 2e-33
Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YLTG+QL S R LQ G R +E+D W + V
Sbjct: 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +I +YAF+ +EYPV++++E+H + Q K+A+ + + LG+ L
Sbjct: 60 VHHGYTLTSKILFRDVIETINKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKL 119
Query: 228 ---FTPGSECLKEFPSPESLKRRIIISTKP 254
+ K+ PSP+SLK +I+I K
Sbjct: 120 DLSSVISGDS-KQLPSPQSLKGKILIKGKK 148
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227 |
| >gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 5e-33
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+SHY + + HN+YL +QL S IRAL KG R +ELD W ++ +
Sbjct: 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T T+ + LR+I++YAF AS YPV+++LE+H + + Q +A + LG IL
Sbjct: 60 IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPIL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKPPK 256
P PSPE LK +I++ K K
Sbjct: 120 LDQPLDGVTTSLPSPEQLKGKILLKGKKLK 149
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258 |
| >gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 4e-31
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
DM+ P++HYFI + HN+YLT +Q+ S +RA +G R +ELD W + V
Sbjct: 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPGGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + +++++++AF AS YPV+++LE+H + QA +A + LG++L
Sbjct: 60 IYHGHTLTSKILFRDVIQAVRQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDML 119
Query: 228 FTP--GSECLKEFPSPESLKRRIIISTK 253
T S +E PSPE LK R+++ K
Sbjct: 120 VTQPLDSLNPEELPSPEELKGRVLVKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258 |
| >gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 2e-30
Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 4/169 (2%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
+M P+SHY+I + HN+YLTG+Q +S+ S R L+ G R IELD W D + V+
Sbjct: 3 EMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPVI 60
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T ++ L +IKE+AFV SEYP+++++EDH + Q +A+ + G++L
Sbjct: 61 YHGHTLTTKIKFSDVLHTIKEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLL 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 276
T P PSP LKR+I+I K + + E + E R KG
Sbjct: 121 TKPVDINADGLPSPNQLKRKILIKHKKLYRDMSSFPETKAEKYVNRSKG 169
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229 |
| >gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 1e-29
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR-ALQKGVRVIELDIWPNSKKDNV 166
+ DM P++HYFI + HN+YLTG Q S V + R L G R IELD W +D
Sbjct: 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGK-SSVEMYRQVLLAGCRCIELDCWDGKGEDQE 59
Query: 167 DVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225
++ HG M + +++IK+ AFV S+YPV+++ E+H + Q K+A+ + G+
Sbjct: 60 PIITHGKAMCTDILFKDVIQAIKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGD 119
Query: 226 ILFT---------PGSECLKEFPSPESLKRRIIISTK 253
+L T PG PSP LKR+I+I K
Sbjct: 120 LLLTKPLESHPLEPG----VPLPSPNKLKRKILIKNK 152
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257 |
| >gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 3e-28
Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM P+SHY+I + HN+YLTG+QL S+ S IR L+ G R IELD W + +
Sbjct: 3 DMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPDGKPI-IY 61
Query: 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE-ILF 228
HG T T ++ +++IK++AFV SEYPV++++E+H + + Q +A++ + G+ +L
Sbjct: 62 HGWTRTTKIKFDDVVQAIKDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLM 121
Query: 229 TPGSECLKEFPSPESLKRRIIISTK 253
P + PSP LK +III K
Sbjct: 122 KPLEASADQLPSPTQLKEKIIIKHK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254 |
| >gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-27
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+S YFI + HN+YL +QL + AL+KG R +E+D W + + V
Sbjct: 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGADNEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + + ++++YAF S+YPVV++LE+H + + Q +A + LGE L
Sbjct: 60 VYHGYTLTSKILFKEVITTVEKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKL 119
Query: 228 FTP--GSECLKEFPSPESLKRRIIISTK 253
E PSPE+LK +I++ K
Sbjct: 120 LRAPIDDPATGELPSPEALKFKILVKNK 147
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257 |
| >gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-27
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YL+G+QL S LQ G R +E+D W + +
Sbjct: 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI- 226
V HG T+T+ + + +I +YAF+ +EYPV++++E+H + Q K+A+ +T+ LG+
Sbjct: 60 VHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKL 119
Query: 227 -LFTPGSECLKEFPSPESLKRRIIISTKP 254
L + S PSPE LK +I++ K
Sbjct: 120 DLSSVISNDCTRLPSPEILKGKILVKGKK 148
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254 |
| >gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+ HYFI + HN+YL +QL S IRAL++G R +E+D+W + +
Sbjct: 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPNGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T T+ + + ++ +YAF S+YPV+++LE+H + Q +A+ +T+ LGE L
Sbjct: 60 VYHGHTFTSKILFKDVVAAVAQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKL 119
Query: 228 F--TPGSECLKEFPSPESLKRRIIISTK 253
T + PSPE L+ +I++ K
Sbjct: 120 LSTTLDGVLPTQLPSPEELRGKILLKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258 |
| >gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 1e-25
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 351 KVRRLSLSEQQLENAVGT-YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMV 409
V R SLSE QL+ + + D++ FTQ+NLLR+YP G+R+ SSNY+P++ W HGAQMV
Sbjct: 148 PVIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMV 207
Query: 410 AFNMQT 415
A NMQ
Sbjct: 208 ALNMQG 213
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228 |
| >gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 3e-25
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
D+ P+S+Y+I + HN+YLTG+QL + S + L G R +ELD W + +
Sbjct: 3 DLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCW-DGDDGMPIIY 61
Query: 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229
HG T+T + + +I AF+ S+YPV++++E+H + Q K+AE+ GE L T
Sbjct: 62 HGHTLTTKIPFKDVVEAINRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVT 121
Query: 230 PGSECLKE--------FPSPESLKRRIIISTKPPKE 257
+ L E PSP LK +I++ K E
Sbjct: 122 ---KFLFESDFSDDPSLPSPLQLKNKILLKNKKAPE 154
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254 |
| >gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 9e-25
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 5/149 (3%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+ +YFI + HN+YLTG+QL S R LQ G R +E+D W + V
Sbjct: 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +I +YAFV +E+PV++++E+H + Q K+A+ + + G+ L
Sbjct: 60 VHHGYTLTSKITFRDVIETINKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKL 119
Query: 228 ---FTPGSECLKEFPSPESLKRRIIISTK 253
+ K+ PSP+ LK +I++ K
Sbjct: 120 DLSSVLTGDP-KQLPSPQLLKGKILVKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253 |
| >gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 1e-24
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S SE + + + V++ +R L R+YPKG RVDSSNYNP W+ G QMVA N QT
Sbjct: 152 SFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQT 211
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226 |
| >gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 6e-24
Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 13/160 (8%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
H DMT P++HYFI + HN+YLT Q + S + L G R +ELD W D
Sbjct: 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEP 60
Query: 168 VL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGE 225
++ HG TMT + + +I E AF S YPV+++ E+H+ +P QAK+AE G+
Sbjct: 61 IITHGFTMTTEILFKDAIEAIAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGD 120
Query: 226 ILFTPGSECLKEF--------PSPESLKRRIIISTKPPKE 257
+L T E L+++ PSPE L+ +I+I K +E
Sbjct: 121 MLLT---EPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE 157
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261 |
| >gnl|CDD|215891 pfam00387, PI-PLC-Y, Phosphatidylinositol-specific phospholipase C, Y domain | Back alignment and domain information |
|---|
Score = 93.7 bits (234), Expect = 6e-23
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S SE + + + + V+ +R L R+YPKG+RVDSSNY+P W+ G QMVA N QT
Sbjct: 30 SFSETKAKKLLKESPAEFVKHNRRQLSRVYPKGLRVDSSNYDPQPFWNAGCQMVALNWQT 89
|
This associates with pfam00388 to form a single structural unit. Length = 117 |
| >gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Score = 94.4 bits (234), Expect = 1e-21
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM P+SHYFI + HN+YLT QL S + L G R IELD W + +
Sbjct: 3 DMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFI 62
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + +I E AF S YPV+++ E+H+ + QAK+AE G+ L
Sbjct: 63 THGFTMTTEIPFKDVIEAIAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDAL 122
Query: 228 ---------FTPGSECLKEFPSPESLKRRIIISTKPPK---EYLEAKEEKEKENDSQRGK 275
PG + PSP+ L +I++ K Y+E + K E ++R K
Sbjct: 123 LIDPLDKYPLVPG----VQLPSPQELMGKILVKNKKMSTLVNYIEPVKFKSFEAAAKRNK 178
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258 |
| >gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Score = 91.7 bits (227), Expect = 9e-21
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM+ P+SHYFI + HN+YLT QL + S + L G R +ELD W + V+
Sbjct: 3 DMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVI 62
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + + +I E AF S +P++++ E+H+ +P QAK+AE G+ L
Sbjct: 63 THGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDAL 122
Query: 228 FTPGSECLKEF--------PSPESLKRRIIISTK 253
E L+++ PSP L +I++ K
Sbjct: 123 LM---EPLEKYPLESGVPLPSPMDLMYKILVKNK 153
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258 |
| >gnl|CDD|215765 pfam00168, C2, C2 domain | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 3e-20
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE 493
L+VTV + D D Y +V + G DT KKTK +++ P WNE
Sbjct: 1 LRVTVISAKNL------PPKDLNGKSDPYVKVSLGGQKKDT--KKTKVVKNTLNPVWNET 52
Query: 494 FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTC 526
F F +++PELA LRIEV++YD KDDF G+
Sbjct: 53 FTFEVTLPELAELRIEVYDYDRFGKDDFIGEVT 85
|
Length = 85 |
| >gnl|CDD|214577 smart00239, C2, Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 4e-20
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 492
TL V + D D Y +V + G P KKTK +++ P WNE
Sbjct: 1 TLTVKIISARNL------PPKDKGGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNE 52
Query: 493 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPL 541
FEF + PELA L IEV++ D +DDF GQ +P+S+L G R L
Sbjct: 53 TFEFEVPPPELAELEIEVYDKDRFGRDDFIGQVTIPLSDLLLGGRHEKL 101
|
Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotagmins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. Length = 101 |
| >gnl|CDD|176497 cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C | Back alignment and domain information |
|---|
Score = 89.6 bits (222), Expect = 6e-20
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 13/174 (7%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-----CSDVPIIRALQKGVRVIELDIWPNSK 162
HH T P++HY I H++YLT Q + L G R +++ W
Sbjct: 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDG-- 58
Query: 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH--LTPDLQAKVAEMVT 220
K +++ G + L + + +I ++ ++++L++ QAK+AE
Sbjct: 59 KPEEPIIYHGPTFLDIFLKEVIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCR 118
Query: 221 QTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRG 274
G++L TP + PS E L+ +I++ + ND+
Sbjct: 119 TIFGDMLLTPPLKPTVPLPSLEDLRGKILLL----NKKNGFSGPTGSSNDTGFV 168
|
This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs. Length = 274 |
| >gnl|CDD|150071 pfam09279, efhand_like, Phosphoinositide-specific phospholipase C, efhand-like | Back alignment and domain information |
|---|
Score = 82.2 bits (204), Expect = 2e-19
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ +F +YS N G +T + L RFL E QK+ + ++E A AII+ + + +R L+
Sbjct: 2 IDELFKEYSSNKGVLTAEELRRFLNEEQKDPRLTEEQALAIIE--KYEPNEEAKKRGQLS 59
Query: 86 LEAFFKYLFGDINPPLSP 103
L+ F +YLF D N +P
Sbjct: 60 LDGFTRYLFSDENSIFNP 77
|
Members of this family are predominantly found in phosphoinositide-specific phospholipase C. They adopt a structure consisting of a core of four alpha helices, in an EF like fold, and are required for functioning of the enzyme. Length = 83 |
| >gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 2e-15
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S SE + GN+ VR +R L RIYP G+R DSSNY+P W+ G Q+VA N QT
Sbjct: 183 SFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQT 242
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257 |
| >gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 4e-15
Identities = 28/61 (45%), Positives = 34/61 (55%)
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
S SE + V +RF QR L RIYP R+DSSN+NP W+ G Q+VA N Q
Sbjct: 152 SSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQ 211
Query: 415 T 415
T
Sbjct: 212 T 212
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227 |
| >gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 2e-14
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
SLSE+ L + + + +R+L+R+YP G R+ SSN+NPL W G QMVA N QT
Sbjct: 157 SLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQT 216
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231 |
| >gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 3e-13
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S +E + + + V + +R L RIYPKG RVDSSNY P I W+ G QMVA N QT
Sbjct: 183 SFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQT 242
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257 |
| >gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 7e-13
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S +E + + GN+ V+ L R+YP G+R DSSNYNP W+ G QMVA N QT
Sbjct: 184 SFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQT 243
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258 |
| >gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 4e-12
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 369 YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTG 416
G +++ +R L R+YPKG RVDSSNY+P+ W+ G+QMVA N QT
Sbjct: 168 KGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTP 215
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229 |
| >gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 8e-12
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S +E + T + V + +R + RIYPKG RVDSSNY P I W+ G QMV+ N QT
Sbjct: 183 SFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQT 242
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257 |
| >gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 9e-12
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S+ E + + + G D V TQR + RIYPKG R SSNYNP W+ G QMVA N QT
Sbjct: 183 SIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQT 242
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257 |
| >gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 9e-12
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
SL+E + Y +V+ T+ LLR YP R+DSSN NPLI W HG Q+VA N QT
Sbjct: 180 SLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQT 239
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254 |
| >gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 2e-11
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 325 EYRKLIAIHAG------KPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQ 378
+++KLIAI KP K+ L+ +PD S E + + + ++++ +
Sbjct: 144 KHKKLIAIELSDLVVYCKPTSKTKDNLE-NPDFKEIRSFVETKAPSIIRQKPVQLLKYNR 202
Query: 379 RNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
+ L R+YPKG RVDSSNY+P W G+QMVA N QT
Sbjct: 203 KGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQT 239
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254 |
| >gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 3e-11
Identities = 29/60 (48%), Positives = 34/60 (56%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S SE + + +RF QR L RIYP RVDSSNYNP W+ G QMVA N Q+
Sbjct: 180 SFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQS 239
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254 |
| >gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 3e-11
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LS SE + V + + Q+ L RIYP R+DSSN+NPL W+ G Q+VA N Q
Sbjct: 178 LSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQ 237
Query: 415 T 415
+
Sbjct: 238 S 238
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253 |
| >gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 2e-10
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
SLSE++ + + GN VR R L R+YP G+R++S+NY+P W+ G Q+VA N QT
Sbjct: 184 SLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQT 243
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258 |
| >gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 6e-10
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 370 GNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTG 416
GN VR L RIYP G R DSSNY+P+ W+ G Q+VA N QT
Sbjct: 198 GNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTP 244
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258 |
| >gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 6e-10
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S +E + + + V + +R + RIYPKG R+DSSNY P + W+ G QMVA N QT
Sbjct: 187 SFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQT 246
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261 |
| >gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 9e-10
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
S SE + D V + ++ L R+YP +RVDSSNYNP W+ G Q+VA N QT
Sbjct: 186 SFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQT 245
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiments show both, PRIP-1 and PRIP-2, are involved in InsP3-mediated calcium signaling pathway and GABA(A)receptor-mediated signaling pathway. In addition, PRIP-2 acts as a negative regulator of B-cell receptor signaling and immune responses. Length = 260 |
| >gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Score = 58.6 bits (141), Expect = 1e-09
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
+ V + + L RIYPKG RVDSSNY P + W+ G QMVA N QT
Sbjct: 200 EFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQT 243
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258 |
| >gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 2e-09
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 356 SLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
S E + E V + G +++ +R L RIYPKG R+DSSNY+PL W G+Q+VA N Q
Sbjct: 154 SFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQ 213
Query: 415 T 415
T
Sbjct: 214 T 214
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229 |
| >gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQT 415
+ V + ++ L RIYPKG RVDSSNY P + W+ G QMVA N QT
Sbjct: 200 EFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQT 243
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258 |
| >gnl|CDD|175973 cd00030, C2, C2 domain | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 2e-09
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513
D D Y +V + G KTK +++ P WNE FEFP+ PE L +EV +
Sbjct: 15 DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70
Query: 514 DMSEKDDFGGQTCLPVSELKQ 534
D KDDF G+ +P+SEL
Sbjct: 71 DRFSKDDFLGEVEIPLSELLD 91
|
The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 102 |
| >gnl|CDD|176500 cd08557, PI-PLCc_bacteria_like, Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 109 HDMTAPVSHYFIYTGHNSY-------LTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS 161
P+S I HNSY S D+ I L GVR ++L + +
Sbjct: 3 LLDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDP 62
Query: 162 KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA---SEYPVVITLEDHLTPD---LQAKV 215
++ V HG + L L +K F+ SE V++ LE D ++
Sbjct: 63 DDGDLYVCHGLFLLNGQTLEDVLNEVK--DFLDAHPSE-VVILDLEHEYGGDNGEDHDEL 119
Query: 216 AEMVTQTLGEILFTP 230
++ LG+ L+ P
Sbjct: 120 DALLRDVLGDPLYRP 134
|
This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD). They are distinct from the typical eukaryotic phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11), which have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, which is closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be distinct from that of typical eukaryotic PI-PLCs. This family also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host's immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs. Length = 271 |
| >gnl|CDD|175991 cd04025, C2B_RasA1_RasA4, C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-07
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 460 DFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK 518
D + RV G +T V+KK+ P WNE FEF L + L +EV ++D+ K
Sbjct: 22 DPFVRVFYNGQTLETSVVKKSC------YPRWNEVFEFELMEGADSPLSVEVWDWDLVSK 75
Query: 519 DDFGGQTCLPVSELKQ 534
+DF G+ + L+Q
Sbjct: 76 NDFLGKVVFSIQTLQQ 91
|
RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 123 |
| >gnl|CDD|176498 cd08555, PI-PLCc_GDPD_SF, Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 6e-07
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------ 176
H Y Q N+ RAL G R +ELD+ +K + V HG T+
Sbjct: 3 SHRGYSQNGQENTL---EAFYRALDAGARGLELDVRL-TKDGELVVYHGPTLDRTTAGIL 58
Query: 177 PVELIKCLRSIKEYAFVASEYPVVITLEDH----LTPDLQAKVAE 217
P L + L I +Y +Y ++++LE + AKV +
Sbjct: 59 PPTLEEVLELIADYLK-NPDYTIILSLEIKQDSPEYDEFLAKVLK 102
|
The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols that are major sources of carbon and phosphate. Both, PI-PLCs and GP-GDEs, can hydrolyze the 3'-5' phosphodiester bonds in different substrates, and utilize a similar mechanism of general base and acid catalysis with conserved histidine residues, which consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81, glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs). The residues essential for enzyme activities and metal binding are not conserved in these sequence homologs, which might suggest that the function of catalytic domains in these proteins might be distinct from those in typical PLC-like phosphodiesterases. Length = 179 |
| >gnl|CDD|175992 cd04026, C2_PKC_alpha_gamma, C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 3e-06
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 471 PADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-ELALLRIEVHEYDMSEKDDFGGQTCLPV 529
P + +KTKT++ P WNE F F L + L IEV ++D + ++DF G V
Sbjct: 46 PKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEVWDWDRTTRNDFMGSLSFGV 105
Query: 530 SEL 532
SEL
Sbjct: 106 SEL 108
|
A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-I topology. Length = 131 |
| >gnl|CDD|176005 cd04040, C2D_Tricalbin-like, C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 8e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL---K 533
KTL P WNE FE P+ A+L++EV+++D KDD G + +S+L +
Sbjct: 38 TIKKTLN----PVWNESFEVPVPSRVRAVLKVEVYDWDRGGKDDLLGSAYIDLSDLEPEE 93
Query: 534 QGIRAVPLHDRKGERYKSVKL 554
+PL + G + +V L
Sbjct: 94 TTELTLPLDGQGGGKLGAVFL 114
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the fifth C2 repeat, C2E, and has a type-II topology. Length = 115 |
| >gnl|CDD|176057 cd08675, C2B_RasGAP, C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 6e-05
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 460 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELA 504
D +ARV + T K+TK + P ++E F F L++ E +
Sbjct: 20 DPFARV-TLNYSSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEEEDLEKS 78
Query: 505 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 534
LR+E+ M DDF G+ +P+ L+Q
Sbjct: 79 ELRVELWHASMVSGDDFLGEVRIPLQGLQQ 108
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-I topology. Length = 137 |
| >gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 7e-05
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 478 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 535
KTK ++ P WNEEF + +L I V+++D EK+D G + +S+L+ G
Sbjct: 1076 KTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVNDWDSGEKNDLLGTAEIDLSKLEPG 1133
|
Length = 1227 |
| >gnl|CDD|176007 cd04042, C2A_MCTP_PRT, C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 4e-04
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 478 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-- 535
K+KT+ N P W+E+F P+ L I+V +YD DDF G + +S L+
Sbjct: 36 KSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFDYDRGLTDDFMGSAFVDLSTLELNKP 94
Query: 536 -IRAVPLHDRKGERYKSVKLL 555
+ L D + L
Sbjct: 95 TEVKLKLEDPNSDEDLGYISL 115
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. Length = 121 |
| >gnl|CDD|175998 cd04032, C2_Perforin, C2 domain of Perforin | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 9e-04
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 429 PAKK---TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN 485
P ++ TL VTV G + D+ ++ D Y +V G K+T+ + +N
Sbjct: 22 PTRRGLATLTVTVLRATGLWGDY-------FTSTDGYVKVFFGGQ-----EKRTEVIWNN 69
Query: 486 WIPSWNEEFEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 537
P WN F+F + + LR EV + D DD G TC + G+
Sbjct: 70 NNPRWNATFDFGSVELSPGGKLRFEVWDRDNGWDDDLLG-TC--SVVPEAGVH 119
|
Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 127 |
| >gnl|CDD|176019 cd08373, C2A_Ferlin, C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 459 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL-ALLRIEVHEYDMS 516
D A+V GV KKT+ LE+ P WNE FE+PL P+ L I V +Y+
Sbjct: 15 GDRIAKVTFRGVK-----KKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEKV 69
Query: 517 EKDDFGGQTCLPVSEL 532
++ G + + +L
Sbjct: 70 GRNRLIGSATVSLQDL 85
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. Length = 127 |
| >gnl|CDD|176037 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 478 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGI 536
K+K +++N P WNE +E + L IE+ + D +KDDF G+ + + K+G
Sbjct: 42 KSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFDEDP-DKDDFLGRLSIDLGSVEKKGF 100
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains either the first or third repeat in Synaptotagmin-like proteins with a type-I topology. Length = 121 |
| >gnl|CDD|176003 cd04038, C2_ArfGAP, C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELAL-LRIEVHEYDMSEKDDFGG 523
KT+ ++ N P WNEE SVP L++EV + D KDD G
Sbjct: 35 VKTRVIKKNLNPVWNEELTL--SVPNPMAPLKLEVFDKDTFSKDDSMG 80
|
ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 145 |
| >gnl|CDD|175975 cd00276, C2B_Synaptotagmin, C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.002
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 454 DAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIE 509
D D Y +V + + KKT + P +NE F F + +L L I
Sbjct: 30 DGKGLSDPYVKVSL--LQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87
Query: 510 VHEYDMSEKDDFGGQTCL 527
V + D +++ GQ L
Sbjct: 88 VVDKDSVGRNEVIGQVVL 105
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 134 |
| >gnl|CDD|175996 cd04030, C2C_KIAA1228, C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.003
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510
+KT +DN P ++E FEFP+S+ EL ++V
Sbjct: 55 RKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88
|
KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the third C2 repeat, C2C, and has a type-II topology. Length = 127 |
| >gnl|CDD|175990 cd04024, C2A_Synaptotagmin-like, C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Score = 37.4 bits (87), Expect = 0.004
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 478 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
KT+T+ + P WN EFP+ + LL++ + + D D+ G+ + + E+
Sbjct: 38 KTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLILWDKDRFAGKDYLGEFDIALEEV 92
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-I topology. Length = 128 |
| >gnl|CDD|176030 cd08384, C2B_Rabphilin_Doc2, C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.004
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 478 KTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGG 523
K KTL P +NEEF + + +LA L I V + D+ + +D+ G
Sbjct: 57 KKKTLN----PEFNEEFFYDIKHSDLAKKTLEITVWDKDIGKSNDYIG 100
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 133 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 561 | |||
| PLN02222 | 581 | phosphoinositide phospholipase C 2 | 100.0 | |
| PLN02230 | 598 | phosphoinositide phospholipase C 4 | 100.0 | |
| PLN02228 | 567 | Phosphoinositide phospholipase C | 100.0 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 100.0 | |
| PLN02952 | 599 | phosphoinositide phospholipase C | 100.0 | |
| PLN02223 | 537 | phosphoinositide phospholipase C | 100.0 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 100.0 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 100.0 | |
| cd08629 | 258 | PI-PLCc_delta1 Catalytic domain of metazoan phosph | 100.0 | |
| cd08633 | 254 | PI-PLCc_eta2 Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08630 | 258 | PI-PLCc_delta3 Catalytic domain of metazoan phosph | 100.0 | |
| cd08632 | 253 | PI-PLCc_eta1 Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08624 | 261 | PI-PLCc_beta2 Catalytic domain of metazoan phospho | 100.0 | |
| cd08595 | 257 | PI-PLCc_zeta Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08631 | 258 | PI-PLCc_delta4 Catalytic domain of metazoan phosph | 100.0 | |
| cd08596 | 254 | PI-PLCc_epsilon Catalytic domain of metazoan phosp | 100.0 | |
| cd08626 | 257 | PI-PLCc_beta4 Catalytic domain of metazoan phospho | 100.0 | |
| cd08623 | 258 | PI-PLCc_beta1 Catalytic domain of metazoan phospho | 100.0 | |
| cd08591 | 257 | PI-PLCc_beta Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08593 | 257 | PI-PLCc_delta Catalytic domain of metazoan phospho | 100.0 | |
| cd08625 | 258 | PI-PLCc_beta3 Catalytic domain of metazoan phospho | 100.0 | |
| cd08628 | 254 | PI-PLCc_gamma2 Catalytic domain of metazoan phosph | 100.0 | |
| cd08594 | 227 | PI-PLCc_eta Catalytic domain of metazoan phosphoin | 100.0 | |
| cd08597 | 260 | PI-PLCc_PRIP_metazoa Catalytic domain of metazoan | 100.0 | |
| cd08627 | 229 | PI-PLCc_gamma1 Catalytic domain of metazoan phosph | 100.0 | |
| cd08558 | 226 | PI-PLCc_eukaryota Catalytic domain of eukaryotic p | 100.0 | |
| cd08598 | 231 | PI-PLC1c_yeast Catalytic domain of putative yeast | 100.0 | |
| cd08592 | 229 | PI-PLCc_gamma Catalytic domain of metazoan phospho | 100.0 | |
| cd08599 | 228 | PI-PLCc_plant Catalytic domain of plant phosphatid | 100.0 | |
| cd00137 | 274 | PI-PLCc Catalytic domain of prokaryotic and eukary | 100.0 | |
| smart00148 | 135 | PLCXc Phospholipase C, catalytic domain (part); do | 100.0 | |
| PF00388 | 146 | PI-PLC-X: Phosphatidylinositol-specific phospholip | 100.0 | |
| smart00149 | 115 | PLCYc Phospholipase C, catalytic domain (part); do | 100.0 | |
| PF00387 | 118 | PI-PLC-Y: Phosphatidylinositol-specific phospholip | 100.0 | |
| cd08589 | 324 | PI-PLCc_SaPLC1_like Catalytic domain of Streptomyc | 99.86 | |
| cd00275 | 128 | C2_PLC_like C2 domain present in Phosphoinositide- | 99.81 | |
| cd08590 | 267 | PI-PLCc_Rv2075c_like Catalytic domain of uncharact | 99.77 | |
| cd08395 | 120 | C2C_Munc13 C2 domain third repeat in Munc13 (mamma | 99.72 | |
| cd08677 | 118 | C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a | 99.69 | |
| cd08692 | 135 | C2B_Tac2-N C2 domain second repeat found in Tac2-N | 99.67 | |
| cd08406 | 136 | C2B_Synaptotagmin-12 C2 domain second repeat prese | 99.67 | |
| cd04036 | 119 | C2_cPLA2 C2 domain present in cytosolic PhosphoLip | 99.66 | |
| cd08682 | 126 | C2_Rab11-FIP_classI C2 domain found in Rab11-famil | 99.66 | |
| cd04042 | 121 | C2A_MCTP_PRT C2 domain first repeat found in Multi | 99.65 | |
| cd04016 | 121 | C2_Tollip C2 domain present in Toll-interacting pr | 99.64 | |
| cd08557 | 271 | PI-PLCc_bacteria_like Catalytic domain of bacteria | 99.64 | |
| cd08407 | 138 | C2B_Synaptotagmin-13 C2 domain second repeat prese | 99.63 | |
| cd08381 | 122 | C2B_PI3K_class_II C2 domain second repeat present | 99.63 | |
| cd04015 | 158 | C2_plant_PLD C2 domain present in plant phospholip | 99.61 | |
| cd04019 | 150 | C2C_MCTP_PRT_plant C2 domain third repeat found in | 99.61 | |
| cd08379 | 126 | C2D_MCTP_PRT_plant C2 domain fourth repeat found i | 99.61 | |
| cd08377 | 119 | C2C_MCTP_PRT C2 domain third repeat found in Multi | 99.61 | |
| cd04029 | 125 | C2A_SLP-4_5 C2 domain first repeat present in Syna | 99.61 | |
| cd04022 | 127 | C2A_MCTP_PRT_plant C2 domain first repeat found in | 99.6 | |
| cd04028 | 146 | C2B_RIM1alpha C2 domain second repeat contained in | 99.59 | |
| cd08392 | 128 | C2A_SLP-3 C2 domain first repeat present in Synapt | 99.59 | |
| cd08393 | 125 | C2A_SLP-1_2 C2 domain first repeat present in Syna | 99.58 | |
| cd08404 | 136 | C2B_Synaptotagmin-4 C2 domain second repeat presen | 99.58 | |
| cd04010 | 148 | C2B_RasA3 C2 domain second repeat present in RAS p | 99.57 | |
| cd08378 | 121 | C2B_MCTP_PRT_plant C2 domain second repeat found i | 99.57 | |
| cd04039 | 108 | C2_PSD C2 domain present in Phosphatidylserine dec | 99.57 | |
| cd04033 | 133 | C2_NEDD4_NEDD4L C2 domain present in the Human neu | 99.56 | |
| cd08402 | 136 | C2B_Synaptotagmin-1 C2 domain second repeat presen | 99.56 | |
| cd08410 | 135 | C2B_Synaptotagmin-17 C2 domain second repeat prese | 99.56 | |
| cd08400 | 126 | C2_Ras_p21A1 C2 domain present in RAS p21 protein | 99.56 | |
| cd08403 | 134 | C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe | 99.56 | |
| cd08385 | 124 | C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe | 99.56 | |
| cd04041 | 111 | C2A_fungal C2 domain first repeat; fungal group. C | 99.55 | |
| cd08376 | 116 | C2B_MCTP_PRT C2 domain second repeat found in Mult | 99.55 | |
| cd08384 | 133 | C2B_Rabphilin_Doc2 C2 domain second repeat present | 99.54 | |
| cd08681 | 118 | C2_fungal_Inn1p-like C2 domain found in fungal Ing | 99.54 | |
| cd08375 | 136 | C2_Intersectin C2 domain present in Intersectin. A | 99.53 | |
| cd08678 | 126 | C2_C21orf25-like C2 domain found in the Human chro | 99.53 | |
| cd04031 | 125 | C2A_RIM1alpha C2 domain first repeat contained in | 99.53 | |
| cd08387 | 124 | C2A_Synaptotagmin-8 C2A domain first repeat presen | 99.53 | |
| cd08405 | 136 | C2B_Synaptotagmin-7 C2 domain second repeat presen | 99.52 | |
| cd08373 | 127 | C2A_Ferlin C2 domain first repeat in Ferlin. Ferli | 99.52 | |
| cd08680 | 124 | C2_Kibra C2 domain found in Human protein Kibra. K | 99.51 | |
| cd04050 | 105 | C2B_Synaptotagmin-like C2 domain second repeat pre | 99.51 | |
| cd08388 | 128 | C2A_Synaptotagmin-4-11 C2A domain first repeat pre | 99.51 | |
| cd08521 | 123 | C2A_SLP C2 domain first repeat present in Synaptot | 99.5 | |
| cd08688 | 110 | C2_KIAA0528-like C2 domain found in the Human KIAA | 99.5 | |
| cd04025 | 123 | C2B_RasA1_RasA4 C2 domain second repeat present in | 99.5 | |
| cd04040 | 115 | C2D_Tricalbin-like C2 domain fourth repeat present | 99.5 | |
| cd04018 | 151 | C2C_Ferlin C2 domain third repeat in Ferlin. Ferli | 99.49 | |
| cd04030 | 127 | C2C_KIAA1228 C2 domain third repeat present in unc | 99.49 | |
| cd08409 | 137 | C2B_Synaptotagmin-15 C2 domain second repeat prese | 99.48 | |
| cd08685 | 119 | C2_RGS-like C2 domain of the Regulator Of G-Protei | 99.48 | |
| cd08391 | 121 | C2A_C2C_Synaptotagmin_like C2 domain first and thi | 99.48 | |
| cd04009 | 133 | C2B_Munc13-like C2 domain second repeat in Munc13 | 99.48 | |
| cd08382 | 123 | C2_Smurf-like C2 domain present in Smad ubiquitina | 99.48 | |
| cd04024 | 128 | C2A_Synaptotagmin-like C2 domain first repeat pres | 99.48 | |
| cd04011 | 111 | C2B_Ferlin C2 domain second repeat in Ferlin. Ferl | 99.48 | |
| cd04032 | 127 | C2_Perforin C2 domain of Perforin. Perforin contai | 99.48 | |
| cd04043 | 126 | C2_Munc13_fungal C2 domain in Munc13 (mammalian un | 99.47 | |
| cd08408 | 138 | C2B_Synaptotagmin-14_16 C2 domain second repeat pr | 99.47 | |
| cd08386 | 125 | C2A_Synaptotagmin-7 C2A domain first repeat presen | 99.47 | |
| KOG1030 | 168 | consensus Predicted Ca2+-dependent phospholipid-bi | 99.47 | |
| cd08389 | 124 | C2A_Synaptotagmin-14_16 C2A domain first repeat pr | 99.46 | |
| cd08401 | 121 | C2A_RasA2_RasA3 C2 domain first repeat present in | 99.46 | |
| PF09279 | 83 | EF-hand_like: Phosphoinositide-specific phospholip | 99.46 | |
| cd04051 | 125 | C2_SRC2_like C2 domain present in Soybean genes Re | 99.45 | |
| cd04027 | 127 | C2B_Munc13 C2 domain second repeat in Munc13 (mamm | 99.45 | |
| cd04044 | 124 | C2A_Tricalbin-like C2 domain first repeat present | 99.45 | |
| cd00276 | 134 | C2B_Synaptotagmin C2 domain second repeat present | 99.44 | |
| cd04017 | 135 | C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl | 99.44 | |
| cd04014 | 132 | C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) | 99.44 | |
| cd04054 | 121 | C2A_Rasal1_RasA4 C2 domain first repeat present in | 99.44 | |
| cd04020 | 162 | C2B_SLP_1-2-3-4 C2 domain second repeat present in | 99.43 | |
| cd08390 | 123 | C2A_Synaptotagmin-15-17 C2A domain first repeat pr | 99.43 | |
| cd04026 | 131 | C2_PKC_alpha_gamma C2 domain in Protein Kinase C ( | 99.43 | |
| cd08690 | 155 | C2_Freud-1 C2 domain found in 5' repressor element | 99.42 | |
| cd04046 | 126 | C2_Calpain C2 domain present in Calpain proteins. | 99.41 | |
| cd04035 | 123 | C2A_Rabphilin_Doc2 C2 domain first repeat present | 99.4 | |
| cd04048 | 120 | C2A_Copine C2 domain first repeat in Copine. There | 99.4 | |
| cd04037 | 124 | C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli | 99.38 | |
| cd04038 | 145 | C2_ArfGAP C2 domain present in Arf GTPase Activati | 99.37 | |
| cd08686 | 118 | C2_ABR C2 domain in the Active BCR (Breakpoint clu | 99.36 | |
| cd08691 | 137 | C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li | 99.34 | |
| PLN03008 | 868 | Phospholipase D delta | 99.34 | |
| cd08675 | 137 | C2B_RasGAP C2 domain second repeat of Ras GTPase a | 99.34 | |
| cd04049 | 124 | C2_putative_Elicitor-responsive_gene C2 domain pre | 99.33 | |
| cd08394 | 127 | C2A_Munc13 C2 domain first repeat in Munc13 (mamma | 99.33 | |
| cd04045 | 120 | C2C_Tricalbin-like C2 domain third repeat present | 99.32 | |
| cd04013 | 146 | C2_SynGAP_like C2 domain present in Ras GTPase act | 99.32 | |
| cd08383 | 117 | C2A_RasGAP C2 domain (first repeat) of Ras GTPase | 99.28 | |
| cd04021 | 125 | C2_E3_ubiquitin_ligase C2 domain present in E3 ubi | 99.27 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.27 | |
| PF00168 | 85 | C2: C2 domain; InterPro: IPR000008 The C2 domain i | 99.26 | |
| cd08676 | 153 | C2A_Munc13-like C2 domain first repeat in Munc13 ( | 99.26 | |
| cd04052 | 111 | C2B_Tricalbin-like C2 domain second repeat present | 99.26 | |
| cd08555 | 179 | PI-PLCc_GDPD_SF Catalytic domain of phosphoinositi | 99.23 | |
| cd04047 | 110 | C2B_Copine C2 domain second repeat in Copine. Ther | 99.2 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 99.15 | |
| smart00239 | 101 | C2 Protein kinase C conserved region 2 (CalB). Ca2 | 99.13 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 99.06 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 99.02 | |
| cd08374 | 133 | C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferli | 98.97 | |
| PLN02270 | 808 | phospholipase D alpha | 98.97 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 98.92 | |
| cd00030 | 102 | C2 C2 domain. The C2 domain was first identified i | 98.88 | |
| cd08586 | 279 | PI-PLCc_BcPLC_like Catalytic domain of Bacillus ce | 98.86 | |
| cd08588 | 270 | PI-PLCc_At5g67130_like Catalytic domain of Arabido | 98.83 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 98.72 | |
| PLN02352 | 758 | phospholipase D epsilon | 98.48 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 98.19 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 98.03 | |
| cd08689 | 109 | C2_fungal_Pkc1p C2 domain found in protein kinase | 98.0 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 97.93 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 97.91 | |
| KOG1031 | 1169 | consensus Predicted Ca2+-dependent phospholipid-bi | 97.81 | |
| cd08622 | 276 | PI-PLCXDc_CG14945_like Catalytic domain of Drosoph | 97.64 | |
| cd08587 | 288 | PI-PLCXDc_like Catalytic domain of phosphatidylino | 97.52 | |
| KOG0905 | 1639 | consensus Phosphoinositide 3-kinase [Signal transd | 97.51 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 97.43 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 97.4 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 97.35 | |
| cd08398 | 158 | C2_PI3K_class_I_alpha C2 domain present in class I | 97.2 | |
| cd08693 | 173 | C2_PI3K_class_I_beta_delta C2 domain present in cl | 97.1 | |
| cd08380 | 156 | C2_PI3K_like C2 domain present in phosphatidylinos | 97.09 | |
| cd08616 | 290 | PI-PLCXD1c Catalytic domain of phosphatidylinosito | 97.09 | |
| cd04012 | 171 | C2A_PI3K_class_II C2 domain first repeat present i | 96.92 | |
| cd08683 | 143 | C2_C2cd3 C2 domain found in C2 calcium-dependent d | 96.87 | |
| cd08577 | 228 | PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetic | 96.74 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 96.63 | |
| cd08556 | 189 | GDPD Glycerophosphodiester phosphodiesterase domai | 96.55 | |
| cd08397 | 159 | C2_PI3K_class_III C2 domain present in class III p | 96.5 | |
| cd08562 | 229 | GDPD_EcUgpQ_like Glycerophosphodiester phosphodies | 96.47 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 96.47 | |
| cd08684 | 103 | C2A_Tac2-N C2 domain first repeat found in Tac2-N | 96.44 | |
| cd08582 | 233 | GDPD_like_2 Glycerophosphodiester phosphodiesteras | 96.39 | |
| cd08399 | 178 | C2_PI3K_class_I_gamma C2 domain present in class I | 96.25 | |
| PF03009 | 256 | GDPD: Glycerophosphoryl diester phosphodiesterase | 96.16 | |
| cd08579 | 220 | GDPD_memb_like Glycerophosphodiester phosphodieste | 96.13 | |
| cd08619 | 285 | PI-PLCXDc_plant Catalytic domain of phosphatidylin | 95.88 | |
| cd08563 | 230 | GDPD_TtGDE_like Glycerophosphodiester phosphodiest | 95.84 | |
| cd08620 | 281 | PI-PLCXDc_like_1 Catalytic domain of uncharacteriz | 95.68 | |
| cd08567 | 263 | GDPD_SpGDE_like Glycerophosphodiester phosphodiest | 95.52 | |
| PF00792 | 142 | PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: I | 95.52 | |
| cd08565 | 235 | GDPD_pAtGDE_like Glycerophosphodiester phosphodies | 95.13 | |
| cd08566 | 240 | GDPD_AtGDE_like Glycerophosphodiester phosphodiest | 95.01 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 94.86 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 94.78 | |
| cd08564 | 265 | GDPD_GsGDE_like Glycerophosphodiester phosphodiest | 94.65 | |
| cd08568 | 226 | GDPD_TmGDE_like Glycerophosphodiester phosphodiest | 94.54 | |
| KOG2060 | 405 | consensus Rab3 effector RIM1 and related proteins, | 94.19 | |
| cd08584 | 192 | PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetic | 94.01 | |
| cd08575 | 264 | GDPD_GDE4_like Glycerophosphodiester phosphodieste | 93.72 | |
| cd08561 | 249 | GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodieste | 93.49 | |
| KOG3837 | 523 | consensus Uncharacterized conserved protein, conta | 93.45 | |
| cd08574 | 252 | GDPD_GDE_2_3_6 Glycerophosphodiester phosphodieste | 92.82 | |
| cd08601 | 256 | GDPD_SaGlpQ_like Glycerophosphodiester phosphodies | 92.37 | |
| cd08580 | 263 | GDPD_Rv2277c_like Glycerophosphodiester phosphodie | 91.84 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 91.83 | |
| PRK11143 | 355 | glpQ glycerophosphodiester phosphodiesterase; Prov | 91.82 | |
| cd08581 | 229 | GDPD_like_1 Glycerophosphodiester phosphodiesteras | 91.82 | |
| cd08612 | 300 | GDPD_GDE4 Glycerophosphodiester phosphodiesterase | 91.77 | |
| cd08600 | 318 | GDPD_EcGlpQ_like Glycerophosphodiester phosphodies | 91.68 | |
| cd08607 | 290 | GDPD_GDE5 Glycerophosphodiester phosphodiesterase | 91.53 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 91.51 | |
| cd08573 | 258 | GDPD_GDE1 Glycerophosphodiester phosphodiesterase | 91.5 | |
| cd08571 | 302 | GDPD_SHV3_plant Glycerophosphodiester phosphodiest | 90.96 | |
| cd08605 | 282 | GDPD_GDE5_like_1_plant Glycerophosphodiester phosp | 90.86 | |
| cd08559 | 296 | GDPD_periplasmic_GlpQ_like Periplasmic glycerophos | 90.77 | |
| cd08609 | 315 | GDPD_GDE3 Glycerophosphodiester phosphodiesterase | 90.58 | |
| cd08606 | 286 | GDPD_YPL110cp_fungi Glycerophosphodiester phosphod | 90.3 | |
| cd08570 | 234 | GDPD_YPL206cp_fungi Glycerophosphodiester phosphod | 89.8 | |
| cd05030 | 88 | calgranulins Calgranulins: S-100 domain found in p | 89.76 | |
| cd08602 | 309 | GDPD_ScGlpQ1_like Glycerophosphodiester phosphodie | 89.75 | |
| cd08694 | 196 | C2_Dock-A C2 domains found in Dedicator Of CytoKin | 89.72 | |
| PRK09454 | 249 | ugpQ cytoplasmic glycerophosphodiester phosphodies | 89.71 | |
| cd05024 | 91 | S-100A10 S-100A10: A subgroup of the S-100A10 doma | 89.59 | |
| PTZ00268 | 380 | glycosylphosphatidylinositol-specific phospholipas | 89.58 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 89.54 | |
| cd08695 | 189 | C2_Dock-B C2 domains found in Dedicator Of CytoKin | 89.42 | |
| smart00142 | 100 | PI3K_C2 Phosphoinositide 3-kinase, region postulat | 89.31 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 89.17 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 88.8 | |
| cd08583 | 237 | PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetic | 88.6 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 88.33 | |
| cd08679 | 178 | C2_DOCK180_related C2 domains found in Dedicator O | 88.05 | |
| cd08604 | 300 | GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodi | 88.01 | |
| PF15627 | 156 | CEP76-C2: CEP76 C2 domain | 87.94 | |
| PF10358 | 143 | NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; | 87.85 | |
| PF14429 | 184 | DOCK-C2: C2 domain in Dock180 and Zizimin proteins | 87.57 | |
| cd08572 | 293 | GDPD_GDE5_like Glycerophosphodiester phosphodieste | 87.54 | |
| cd08610 | 316 | GDPD_GDE6 Glycerophosphodiester phosphodiesterase | 86.61 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 86.01 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 85.18 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 83.19 | |
| cd08585 | 237 | GDPD_like_3 Glycerophosphodiester phosphodiesteras | 82.74 | |
| COG0584 | 257 | UgpQ Glycerophosphoryl diester phosphodiesterase [ | 82.73 | |
| cd08613 | 309 | GDPD_GDE4_like_1 Glycerophosphodiester phosphodies | 82.65 | |
| cd08578 | 300 | GDPD_NUC-2_fungi Putative glycerophosphodiester ph | 82.23 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 82.09 | |
| cd08560 | 356 | GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodi | 81.93 | |
| cd08608 | 351 | GDPD_GDE2 Glycerophosphodiester phosphodiesterase | 81.32 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 80.08 | |
| PF01023 | 44 | S_100: S-100/ICaBP type calcium binding domain; In | 80.07 |
| >PLN02222 phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-154 Score=1253.46 Aligned_cols=550 Identities=73% Similarity=1.217 Sum_probs=471.4
Q ss_pred CCCcceeeeEeEecccCCcCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhc
Q 008582 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ 80 (561)
Q Consensus 1 ~~~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 80 (561)
|++++||||+||.|+|+.....+|+||..||.+|++++.||.++|.+||+++|++..++.++|++||++|+.. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~-----~~ 75 (581)
T PLN02222 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LH 75 (581)
T ss_pred CCccceeEEEEeccccccccCCCcHHHHHHHHHhcCCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh-----hh
Confidence 8899999999999999999999999999999999877999999999999999999888999999999998621 23
Q ss_pred cCCCCHHHHHHhhcCCCCCCCCCCCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCC
Q 008582 81 RRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPN 160 (561)
Q Consensus 81 ~~~l~~~gF~~~L~s~~n~~~~~~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg 160 (561)
+++|+++||++||+|++|.++. +..++|||++|||||||||||||||+||||.|.||+|+|++||++||||||||||||
T Consensus 76 ~~~~~~~gF~~yL~s~~n~~~~-~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 154 (581)
T PLN02222 76 RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPN 154 (581)
T ss_pred ccCcCHHHHHHHhcCCCCCCCc-cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 4679999999999999999885 367999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCC
Q 008582 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239 (561)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lP 239 (561)
+++++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++. +....||
T Consensus 155 ~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lp 234 (581)
T PLN02222 155 SDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234 (581)
T ss_pred CCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCC
Confidence 887778999999999999999999999999999999999999999999999999999999999999999874 4467999
Q ss_pred ChhhccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccc
Q 008582 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQ 319 (561)
Q Consensus 240 SP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (561)
||++||||||||+|++++.++..... ....+...++++.++.+.++......+.++.+. +.+..+++++...+.+
T Consensus 235 sP~~Lk~kilik~K~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 309 (581)
T PLN02222 235 SPNSLKKRIIISTKPPKEYKEGKDDE----VVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDS-NGDDDDDDDDGEDKSK 309 (581)
T ss_pred ChHHHCCCEEEEecCCcccccccccc----ccccccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 99999999999999987654432100 001111112222334333332221111111000 0000011111222333
Q ss_pred cccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcc
Q 008582 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPL 399 (561)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~ 399 (561)
...++++++|++++.+++++++...++..|.+++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+
T Consensus 310 ~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~ 389 (581)
T PLN02222 310 KNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPL 389 (581)
T ss_pred cccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCCCCch
Confidence 45678999999999999888777666666667889999999999999999999999999999999999999999999999
Q ss_pred cccccccceeeeecc---------------cCCCCcccCCCCC---------------CCCCceEEEEEEEecCCCCCCC
Q 008582 400 IGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVK---------------LPAKKTLKVTVYMGEGWYYDFP 449 (561)
Q Consensus 400 ~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~---------------~p~~~~L~V~Visaq~L~~~~~ 449 (561)
.||++|||||||||| ||+|||||||... .|++.+|+|+|++|++|+++++
T Consensus 390 ~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~l~~~ 469 (581)
T PLN02222 390 VGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFR 469 (581)
T ss_pred hHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEEEEEEEcccccCCCC
Confidence 999999999999999 8999999999432 2345689999999999887666
Q ss_pred CCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeC
Q 008582 450 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPV 529 (561)
Q Consensus 450 ~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL 529 (561)
....+.++++||||+|+|.|.|.|+.++||+++.||+||+|||+|+|.+..||+|+|||.|+|+|..+.++|+||+++||
T Consensus 470 ~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~~~~ddfigq~~lPv 549 (581)
T PLN02222 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPV 549 (581)
T ss_pred ccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCCCCCCcEEEEEEcch
Confidence 55566778899999999999999999999999999999999999999999999999999999999877899999999999
Q ss_pred cccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 530 SELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 530 ~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.+|++|||||||+|..|+++.+|+|||||+|.
T Consensus 550 ~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 550 WELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred hhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 99999999999999999999999999999984
|
|
| >PLN02230 phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-154 Score=1254.91 Aligned_cols=554 Identities=56% Similarity=0.965 Sum_probs=467.8
Q ss_pred CcceeeeEeEecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHHhhhh-hhhh
Q 008582 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-KASKEDAQAIIDSLRELKH-LNIF 79 (561)
Q Consensus 3 ~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~-~~~~ 79 (561)
|+|||||+||.|+|+.....+|+||+.||.+|+++ +.||.++|.+||+++|+++ ..+.++|++||++++...+ ....
T Consensus 7 m~~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 86 (598)
T PLN02230 7 MGSYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKF 86 (598)
T ss_pred CccceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccc
Confidence 68999999999999999999999999999999877 9999999999999999654 4688999999999985432 2233
Q ss_pred ccCCCCHHHHHHhhcCCC-CCCCCCCCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 008582 80 QRRGLNLEAFFKYLFGDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (561)
Q Consensus 80 ~~~~l~~~gF~~~L~s~~-n~~~~~~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (561)
.++.|+++||++||+|.+ |.+. +..++|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||
T Consensus 87 ~~~~~~~~~F~~yL~s~~~~~~~--~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 164 (598)
T PLN02230 87 TRRNLTLDDFNYYLFSTDLNPPI--ADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLW 164 (598)
T ss_pred cccccCHHHHHHHHcCcccCCcc--cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEecc
Confidence 456799999999999854 4444 3579999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 008582 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (561)
Q Consensus 159 dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~l 238 (561)
||++ ++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+.+||.+||+||+++|||+||.++.+....|
T Consensus 165 dg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~l 243 (598)
T PLN02230 165 PRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEF 243 (598)
T ss_pred CCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCCC
Confidence 9876 579999999999999999999999999999999999999999999999999999999999999999876667889
Q ss_pred CChhhccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCC-CC-CCCCCCC--CCcc
Q 008582 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD-DF-DGGVDND--EEDS 314 (561)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~--~~~~ 314 (561)
|||++||||||||+|++++.++.+...+. .... ....++++.++.+...+.....+.+... +. ..+..++ .+..
T Consensus 244 psP~~Lk~kilik~Kk~~~~~e~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 321 (598)
T PLN02230 244 PSPEELKEKILISTKPPKEYLEANDAKEK-DNGE-KGKDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCE 321 (598)
T ss_pred CChHHHcCCEEEEecCCcccccccccccc-cccc-cccccchhhhccccccccccccccccccccccccccchhcccccc
Confidence 99999999999999998776554321110 0000 1111222333333222221111000000 00 0000000 0011
Q ss_pred ccccccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCC
Q 008582 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (561)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSS 394 (561)
..++...++++|++|++|+.+++++++...++..+.+++|+||||.++.+++++++.+|++||++||+||||+|+|||||
T Consensus 322 ~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdSS 401 (598)
T PLN02230 322 SDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSS 401 (598)
T ss_pred ccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCCC
Confidence 11223456899999999999999999888877777778899999999999999999999999999999999999999999
Q ss_pred CCCcccccccccceeeeecc---------------cCCCCcccCCCCCC---------------CCCceEEEEEEEecCC
Q 008582 395 NYNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVKL---------------PAKKTLKVTVYMGEGW 444 (561)
Q Consensus 395 Nf~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~~---------------p~~~~L~V~Visaq~L 444 (561)
||||+.||++|||||||||| ||+|||||||...+ +++++|+|+|++|++|
T Consensus 402 NynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~~~~L~V~VisGq~~ 481 (598)
T PLN02230 402 NYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDGW 481 (598)
T ss_pred CCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCcCcEEEEEEEEccCc
Confidence 99999999999999999999 89999999995321 2357899999999999
Q ss_pred CCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEE
Q 008582 445 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQ 524 (561)
Q Consensus 445 ~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq 524 (561)
++++++...+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|.|.+..||+|+|||.|+|+|..++++|+||
T Consensus 482 ~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V~d~d~~~~ddfiGQ 561 (598)
T PLN02230 482 LLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEVHEHDINEKDDFGGQ 561 (598)
T ss_pred cCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEEEECCCCCCCCEEEE
Confidence 88776666677889999999999999999999999988888999999999999999999999999999998788999999
Q ss_pred EEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 525 TCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 525 ~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+|+||.+|++|||||||+|..|+++.+++|||||+|.
T Consensus 562 ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 562 TCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred EEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 9999999999999999999999999999999999985
|
|
| >PLN02228 Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-150 Score=1219.78 Aligned_cols=532 Identities=54% Similarity=0.921 Sum_probs=457.4
Q ss_pred CcceeeeEeEecccCCcCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccC
Q 008582 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRR 82 (561)
Q Consensus 3 ~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 82 (561)
+++|+||+||.|+|+.....+|+||..||.+|++++.||.++|.+||+++|++...+.+.|++||++|+..+.. ..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~--~~~~ 79 (567)
T PLN02228 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVF--HHHG 79 (567)
T ss_pred CccceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhh--cccC
Confidence 58999999999999999999999999999999988899999999999999999878899999999999843211 1234
Q ss_pred CCCHHHHHHhhcCCCCCCCCCCCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCC
Q 008582 83 GLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162 (561)
Q Consensus 83 ~l~~~gF~~~L~s~~n~~~~~~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~ 162 (561)
.|+++||++||+|.+|.++.++..++|||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++
T Consensus 80 ~~~~~gF~~yl~s~~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~ 159 (567)
T PLN02228 80 LVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPS 159 (567)
T ss_pred ccCHHHHHHHhcCcccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCC
Confidence 69999999999999999987667899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 008582 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (561)
Q Consensus 163 ~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~ 242 (561)
+++||||||||||++|+|+|||+||++|||++|+|||||||||||+.+||.+||+||++||||+||.++.+....||||+
T Consensus 160 ~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~lpsP~ 239 (567)
T PLN02228 160 GNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSPE 239 (567)
T ss_pred CCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCCCChH
Confidence 77899999999999999999999999999999999999999999999999999999999999999998766678899999
Q ss_pred hccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 008582 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (561)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (561)
+||||||||+|++++..+.+... +. ...++++..++. .. +.++ ...+ ..+.....
T Consensus 240 ~Lk~kilik~Kk~~~~~~~~~~~----~~--~~~~~~~~~~~~-~~---------~~~~--------~~~~-~~~~~~~~ 294 (567)
T PLN02228 240 ELKNKILISTKPPKEYLESKTVQ----TT--RTPTVKETSWKR-VA---------DAEN--------KILE-EYKDEESE 294 (567)
T ss_pred HHCCCEEEEecCCcccccccccc----cc--cccccccccccc-cc---------cchh--------hccc-cccccchh
Confidence 99999999999976543321100 00 000000000000 00 0000 0000 00111235
Q ss_pred chhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCccccc
Q 008582 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (561)
Q Consensus 323 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W 402 (561)
+++|++|++++..++++++.......|...+++||||+++.+++++.+.+|++||++||+||||+|+|+|||||||+.||
T Consensus 295 ~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W 374 (567)
T PLN02228 295 AVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGW 374 (567)
T ss_pred hhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHh
Confidence 68899999998887766665544444555678999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeecc---------------cCCCCcccCCCCC------------CCCCceEEEEEEEecCCCCCCCCCccCC
Q 008582 403 SHGAQMVAFNMQ---------------TGPHNEVFDPKVK------------LPAKKTLKVTVYMGEGWYYDFPHTHFDA 455 (561)
Q Consensus 403 ~~G~QmVALN~Q---------------nG~~Gyvl~P~~~------------~p~~~~L~V~Visaq~L~~~~~~~~~~~ 455 (561)
++|||||||||| ||+|||||||... .|++.+|+|+|++||+|++++.....+.
T Consensus 375 ~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~~~f~p~~~~p~~~~L~I~ViSGq~l~lp~~~~~~~~ 454 (567)
T PLN02228 375 THGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEHTLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTHFDQ 454 (567)
T ss_pred cCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccccccCCccCCCcCceEEEEEEECCccCCCCCCCCCCC
Confidence 999999999999 8999999999632 2445689999999999976554444556
Q ss_pred CCCCCceeEEEEeccCCCceeeecccCCCCCCCcc-ccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCC
Q 008582 456 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 534 (561)
Q Consensus 456 ~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~W-NE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~ 534 (561)
++++||||+|++.|.|.|..++||+++.||+||+| ||+|.|.+..||+|+|||.|+|+|..+.++|+||+++||++|++
T Consensus 455 ~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~~d~figq~~lPv~~Lr~ 534 (567)
T PLN02228 455 YSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDTQNDFAGQTCLPLPELKS 534 (567)
T ss_pred CCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCCCCCEEEEEEcchhHhhC
Confidence 67899999999999999999999999998999999 99999999999999999999999877789999999999999999
Q ss_pred CceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 535 GIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 535 GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|||||||+|..|+++.+|+|||||+|.
T Consensus 535 GYR~VpL~~~~G~~l~~atLfv~~~~~ 561 (567)
T PLN02228 535 GVRAVRLHDRAGKAYKNTRLLVSFALD 561 (567)
T ss_pred CeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence 999999999999999999999999973
|
|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-150 Score=1218.58 Aligned_cols=531 Identities=46% Similarity=0.718 Sum_probs=460.1
Q ss_pred CCCcceeeeEeEecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhh
Q 008582 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIF 79 (561)
Q Consensus 1 ~~~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~ 79 (561)
+.+++||+|+|++++|.-. .+.||||.++|.+|+.+ ++|+.++|.+||+.+|++..++.+.|++||++|+..++. .
T Consensus 182 ~~~~~~k~~~~~~~~~~~~-~~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~--~ 258 (746)
T KOG0169|consen 182 DNSQTGKLEEEEFVKFRKE-LTKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEF--R 258 (746)
T ss_pred HhhccceehHHHHHHHHHh-hccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhc--c
Confidence 4689999999999999666 45566999999999987 999999999999999999999999999999999965541 2
Q ss_pred ccCCCCHHHHHHhhcCCCCCCCCC-CCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 008582 80 QRRGLNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (561)
Q Consensus 80 ~~~~l~~~gF~~~L~s~~n~~~~~-~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (561)
..+.|+++||++||+|..+.+++| +..|+|||++|||||||+|||||||+||||.|+||+|+||+||++||||||||||
T Consensus 259 ~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred ccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 234599999999999999999975 6889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCC
Q 008582 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKE 237 (561)
Q Consensus 159 dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~ 237 (561)
||++ ++|+|+|||||||+|.|++||+|||+|||.+|+|||||||||||+++||++||++|++||||+||.++.+ ....
T Consensus 339 dg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~ 417 (746)
T KOG0169|consen 339 DGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKE 417 (746)
T ss_pred cCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcccc
Confidence 9987 6899999999999999999999999999999999999999999999999999999999999999998765 6799
Q ss_pred CCChhhccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccc
Q 008582 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDK 317 (561)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (561)
|||||+||||||||+|++++.+.... .+.++.....++++.+...+. .+++...+.+
T Consensus 418 lPSPe~LK~KILik~Kk~~~~~~~~~---------------------~~~~~~~~~d~~~~~e~s~e~--~~~~~~~~~~ 474 (746)
T KOG0169|consen 418 LPSPEELKNKILIKGKKLKELLEADS---------------------KEPSSFEVTDEDEDKESSTEN--DKSETDGQKK 474 (746)
T ss_pred CcCHHHHhcCEEEecCCCCccccccc---------------------ccccccccccccccccccccc--cccccccccc
Confidence 99999999999999999876554311 000000000000000000000 0000010112
Q ss_pred cccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCC
Q 008582 318 SQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 397 (561)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~ 397 (561)
....++++|++||.|+.+++++++...++.+ .+++++||||+++.++++..+.+|++||+++|+||||+|+|+||||||
T Consensus 475 ~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~dSSNyn 553 (746)
T KOG0169|consen 475 SRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVDSSNYN 553 (746)
T ss_pred hhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccCCCCCC
Confidence 2236789999999999999999888877764 578899999999999999999999999999999999999999999999
Q ss_pred cccccccccceeeeecc---------------cCCCCcccCCCC------------C-CCCCceEEEEEEEecCCCCCCC
Q 008582 398 PLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKV------------K-LPAKKTLKVTVYMGEGWYYDFP 449 (561)
Q Consensus 398 P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~------------~-~p~~~~L~V~Visaq~L~~~~~ 449 (561)
|+.||++|||||||||| |||||||+||.. . .|+.++|+|+|++||+|+.++.
T Consensus 554 Pq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~~~~F~P~~~~~~~~~tL~IkI~sGq~~~~~~~ 633 (746)
T KOG0169|consen 554 PQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDSGSTFDPKSNLPPVKKTLKIKIISGQGWLPDFG 633 (746)
T ss_pred hHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCCCCccCCCCCCCCCCceeEEEEEecCcccCCCC
Confidence 99999999999999999 999999999942 1 2344579999999999987665
Q ss_pred CCccCCCCCCCceeEEEEeccCCCceeeecccCCCC-CCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEe
Q 008582 450 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLP 528 (561)
Q Consensus 450 ~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lp 528 (561)
.+.. ...+||||.|+|+|.|.|+.+++|+++.+| +||.|+|+|+|++..||+|+|||.|+|+|..++|||+||+|+|
T Consensus 634 ~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~d~d~~~~ddF~GQ~tlP 711 (746)
T KOG0169|consen 634 KTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVHDYDYIGKDDFIGQTTLP 711 (746)
T ss_pred CCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEEecCCCCcccccceeecc
Confidence 5433 355799999999999999999999977665 9999999999999999999999999999999999999999999
Q ss_pred CcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 529 VSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 529 L~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+++|++|||||||+|..|+.+..|+|||||.|.
T Consensus 712 ~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~ 744 (746)
T KOG0169|consen 712 VSELRQGYRHVPLLSREGEALSSASLFVRIAIV 744 (746)
T ss_pred HHHhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence 999999999999999999999999999999973
|
|
| >PLN02952 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-148 Score=1205.40 Aligned_cols=549 Identities=61% Similarity=1.043 Sum_probs=461.5
Q ss_pred CCcceeeeEeEecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhh-hhhhh
Q 008582 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELK-HLNIF 79 (561)
Q Consensus 2 ~~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~-~~~~~ 79 (561)
...+|++|.||.|+++...+++|+||..||.+|+++ +.||.++|.+||+++|++..++.++|++||++|.... +...+
T Consensus 15 g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~~ 94 (599)
T PLN02952 15 GSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTRY 94 (599)
T ss_pred CCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccccc
Confidence 445899999999999999999999999999999977 8999999999999999998889999999999886332 22234
Q ss_pred ccCCCCHHHHHHhhcC-CCCCCCCCCCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 008582 80 QRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (561)
Q Consensus 80 ~~~~l~~~gF~~~L~s-~~n~~~~~~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (561)
.+..|+++||++||+| +.|.+.. ..++|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||
T Consensus 95 ~~~~l~~~~F~~~l~s~~~~~p~~--~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~w 172 (599)
T PLN02952 95 TRHGLNLDDFFHFLLYDDLNGPIT--PQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLW 172 (599)
T ss_pred cccCcCHHHHHHHHcCcccccccc--ccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEee
Confidence 4567999999999996 4565554 479999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 008582 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (561)
Q Consensus 159 dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~l 238 (561)
||+++++|||+||||||++|+|+|||+||++|||++|+|||||||||||+.+||.+||+||+++|||+||.|+.+....|
T Consensus 173 dg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~l 252 (599)
T PLN02952 173 PGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQF 252 (599)
T ss_pred cCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCC
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999876667899
Q ss_pred CChhhccCcEEEecCCCCchhhhHhhhh-hhcc--ccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccc
Q 008582 239 PSPESLKRRIIISTKPPKEYLEAKEEKE-KEND--SQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSD 315 (561)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (561)
|||++||||||||+|+++..++.+.... +..+ ...+...++++ .+...+.... .+.+.+.. .+....+
T Consensus 253 psP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~--~~~~~~~ 323 (599)
T PLN02952 253 PSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESML----FEQEADSR--SDSDQDD 323 (599)
T ss_pred CChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---cccccccccc----cccccccc--ccccchh
Confidence 9999999999999999876654431100 0000 00000000000 0000000000 00000000 0000011
Q ss_pred cccccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCC
Q 008582 316 DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSN 395 (561)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN 395 (561)
.+.....+++|++|+.|+.+++++.+.+.++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|+||||
T Consensus 324 ~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dSsN 403 (599)
T PLN02952 324 NKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSSN 403 (599)
T ss_pred hhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcCCC
Confidence 12233457899999999999888777666655556678899999999999999999999999999999999999999999
Q ss_pred CCcccccccccceeeeecc---------------cCCCCcccCCCCC---------------CCCCceEEEEEEEecCCC
Q 008582 396 YNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVK---------------LPAKKTLKVTVYMGEGWY 445 (561)
Q Consensus 396 f~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~---------------~p~~~~L~V~Visaq~L~ 445 (561)
|||+.||++|||||||||| ||+|||||||... .|++++|+|+|++|++|+
T Consensus 404 y~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~VisGq~l~ 483 (599)
T PLN02952 404 YKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDGWR 483 (599)
T ss_pred CCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCccceEEEEEEECcccC
Confidence 9999999999999999999 8999999999532 234578999999999998
Q ss_pred CCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEE
Q 008582 446 YDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQT 525 (561)
Q Consensus 446 ~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~ 525 (561)
+++.....+.++++||||+|.++|.|.|..++||+++.||+||+|||+|.|.+..|++|+|+|.|+|+|..+.++|+||+
T Consensus 484 lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V~D~D~~~~ddfiGq~ 563 (599)
T PLN02952 484 LDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQT 563 (599)
T ss_pred CCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEEEecCCCCCCCeEEEE
Confidence 76555556777889999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred EEeCcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 526 CLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 526 ~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
++||++|++|||||||+|.+|++++.++|||||+|.
T Consensus 564 ~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 564 CLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 999999999999999999999999999999999984
|
|
| >PLN02223 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-140 Score=1122.06 Aligned_cols=494 Identities=40% Similarity=0.725 Sum_probs=419.0
Q ss_pred EeEecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHHHhhhh-hhhh-ccCC
Q 008582 10 FCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFL---IEVQKEDKASKEDAQAIIDSLRELKH-LNIF-QRRG 83 (561)
Q Consensus 10 ~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~-~~~~-~~~~ 83 (561)
|.|.|+|+.+..++++||..+|.+|+.+ ..|+.++|.+|| .++|+|..++.++|+.|++++...++ +..+ ..+.
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~ 80 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRC 80 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccc
Confidence 4689999999999999999999999876 999999999999 99999999999999999999874432 3333 2367
Q ss_pred CCHHHHHHhhcCC-CCCCCCCCCCc-cCCCCCCccceeecccccccccCCCCCCC-CChHHHHHHHhCCCcEEEEEeeCC
Q 008582 84 LNLEAFFKYLFGD-INPPLSPTPVV-HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-CSDVPIIRALQKGVRVIELDIWPN 160 (561)
Q Consensus 84 l~~~gF~~~L~s~-~n~~~~~~~~~-~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~-Ss~e~Y~~aL~~GCRcvElD~Wdg 160 (561)
|+++||++||+|+ .|.+.. ..+ +|||++|||||||||||||||+||||.|. ||+|+|++||++||||||||||||
T Consensus 81 l~~~~f~~~L~s~~~n~~~~--~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~ 158 (537)
T PLN02223 81 LELDHLNEFLFSTELNPPIG--DQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPD 158 (537)
T ss_pred cCHHHHHHHhcCcccCCccc--cccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCC
Confidence 9999999999975 455443 346 99999999999999999999999999999 999999999999999999999987
Q ss_pred CCCCCceEEeCCcccccchHHHHHHHHhhhccccC-CCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCC
Q 008582 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVAS-EYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEF 238 (561)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S-~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~l 238 (561)
++ ++|+|+||||||++|+|+|||+||++|||++| +||||||||||||++||.+||++|++||||+||+++. +....|
T Consensus 159 ~~-~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~l 237 (537)
T PLN02223 159 GK-DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEF 237 (537)
T ss_pred CC-CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccC
Confidence 54 57899999999999999999999999999998 9999999999999999999999999999999999764 557899
Q ss_pred CChhhccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCcccccc
Q 008582 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKS 318 (561)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (561)
|||++||||||||+|++++.+++.. ++ +. . +. .++ .+..+
T Consensus 238 PSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~~-~-~~---------~~~------~~~~~----- 277 (537)
T PLN02223 238 PSPAELQNKILISRRPPKELLYAKA---------------DD---GG-V-GV---------RNE------LEIQE----- 277 (537)
T ss_pred CChHHhCCCEEEEcCCCcccccccc---------------cc---cc-c-cc---------ccc------ccccc-----
Confidence 9999999999999999865432210 00 00 0 00 000 00000
Q ss_pred ccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhh--cchhHHHhhccceeeeeCCCCC-CCCCC
Q 008582 319 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGT--YGNDIVRFTQRNLLRIYPKGIR-VDSSN 395 (561)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~--~~~~~~~~~~~~l~RvYP~g~R-idSSN 395 (561)
....++|++++.++..++++.+ .+++|.++.++.+. ++.++++||++||+||||+|+| +||||
T Consensus 278 -~~~~~~y~~li~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 278 -GPADKNYQSLVGFHAVEPRGML-------------QKALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred -cccccceeeeeeeeccccccch-------------hhhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 1224678899988877665432 23444444444332 4678999999999999999999 59999
Q ss_pred CCcccccccccceeeeecc---------------cCCCCcccCCCCCC---------C-----CCceEEEEEEEecCCCC
Q 008582 396 YNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVKL---------P-----AKKTLKVTVYMGEGWYY 446 (561)
Q Consensus 396 f~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~~---------p-----~~~~L~V~Visaq~L~~ 446 (561)
|||+.+|++|||||||||| ||+||||+||...+ | .+++|+|+|++|++|+.
T Consensus 344 YnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~FdP~~~~~~~~~L~V~Visgq~~~~ 423 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSGVFYPTENPVVVKILKVKIYMGDGWIV 423 (537)
T ss_pred CCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCcccccCCCCCcccceEEEEEEEEcccccC
Confidence 9999999999999999999 89999999995321 1 24679999999999986
Q ss_pred CCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEE
Q 008582 447 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTC 526 (561)
Q Consensus 447 ~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~ 526 (561)
+++++. +..+.+||||+|+|.|.|.|+.+++|++..|++||+|||+|.|.+.+||+|+|||.|+|+|..++++|+||++
T Consensus 424 ~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~D~D~~~~ddfiGQ~~ 502 (537)
T PLN02223 424 DFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTC 502 (537)
T ss_pred Cccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEEecCCCCCCcEEEEEe
Confidence 554332 4457899999999999999999999987777799999999999999999999999999999888899999999
Q ss_pred EeCcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 527 LPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 527 lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+||.+|++|||||||+|.+|+++.+++|||||+|.
T Consensus 503 LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~ 537 (537)
T PLN02223 503 LPVSELIEGIRAVPLYDERGKACSSTMLLTRFKWS 537 (537)
T ss_pred cchHHhcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence 99999999999999999999999999999999984
|
|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-131 Score=1066.74 Aligned_cols=525 Identities=30% Similarity=0.451 Sum_probs=414.5
Q ss_pred cCCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHHhhhhhhhhccCCCCHHH
Q 008582 19 AASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEA 88 (561)
Q Consensus 19 ~~~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~g 88 (561)
..+|+|+||+.||.+++++ ++||+++|.+||++.|+++. ++..++..||++|++.... ..+++|+.+|
T Consensus 215 ~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~--a~~gqms~dg 292 (1189)
T KOG1265|consen 215 NKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDN--AEKGQMSTDG 292 (1189)
T ss_pred HhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhh--hhccccchhh
Confidence 4579999999999999876 89999999999999999975 4679999999999964321 2457899999
Q ss_pred HHHhhcCCCCCCCCC-CCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCC-CCc
Q 008582 89 FFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNV 166 (561)
Q Consensus 89 F~~~L~s~~n~~~~~-~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~-~~p 166 (561)
|.+||++++|+++.+ ....++||+||||||||||||||||||+||.|.||+|||++||+.||||||||||||.+. +||
T Consensus 293 f~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~EP 372 (1189)
T KOG1265|consen 293 FVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEEP 372 (1189)
T ss_pred hHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCCc
Confidence 999999999999864 356899999999999999999999999999999999999999999999999999999543 579
Q ss_pred eEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-----CCCCCCCCh
Q 008582 167 DVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-----ECLKEFPSP 241 (561)
Q Consensus 167 iv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-----~~~~~lPSP 241 (561)
||+||.|||+.|.|+|||+||+++||++|+||||||+|||||+.||.+||+||++||||+|++.|. ++...||||
T Consensus 373 vITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPsP 452 (1189)
T KOG1265|consen 373 VITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPSP 452 (1189)
T ss_pred eeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999653 335789999
Q ss_pred hhccCcEEEecCCCCchhhhHh--hhhhhcccc-CCCCC----Ccccc---cc-----CC----CCCccccCCCCCC---
Q 008582 242 ESLKRRIIISTKPPKEYLEAKE--EKEKENDSQ-RGKGS----ADEEA---WG-----KE----VPNLKSLNNSACD--- 299 (561)
Q Consensus 242 ~~Lk~KIlik~K~~~~~~~~~~--~~~~~~~~~-~~~~~----~~~~~---~~-----~~----~~~~~~~~~~~~~--- 299 (561)
++||+|||||+||..-...... ...+..+.+ .+..+ .++.. .| .+ -..+......++.
T Consensus 453 ~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~~ 532 (1189)
T KOG1265|consen 453 EDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAHP 532 (1189)
T ss_pred HHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccch
Confidence 9999999999997532111000 000000000 00000 00000 00 00 0000000000000
Q ss_pred CCCCCCC-C-CCCCC------ccccccccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcch
Q 008582 300 KDDFDGG-V-DNDEE------DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGN 371 (561)
Q Consensus 300 ~~~~~~~-~-~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~ 371 (561)
+.+.++. . ..++. +........+++++|+||+|.....+.+|.-+-+ ...+++|+||+|+++..++++++.
T Consensus 533 E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~k-rN~~f~msSf~E~~~~~~Lk~~~i 611 (1189)
T KOG1265|consen 533 ELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEK-RNRHFEMSSFDESTGLGYLKKSPI 611 (1189)
T ss_pred hhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhh-hcceeeeeechhHHHHHHHHhCch
Confidence 0000000 0 00000 0000112235789999998755444445543333 235789999999999999999999
Q ss_pred hHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecc---------------cCCCCcccCCC-----------
Q 008582 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPK----------- 425 (561)
Q Consensus 372 ~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~----------- 425 (561)
+||+||+++|+||||+|+|||||||+|+.|||+|||||||||| ||+|||++||.
T Consensus 612 efV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpDr~fdP 691 (1189)
T KOG1265|consen 612 EFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPDRQFDP 691 (1189)
T ss_pred HHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCCcCcCC
Confidence 9999999999999999999999999999999999999999999 89999998884
Q ss_pred -CCCC----CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCcee--eecccCCCC-CCCccccE-EEE
Q 008582 426 -VKLP----AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM--KKTKTLEDN-WIPSWNEE-FEF 496 (561)
Q Consensus 426 -~~~p----~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k--~kTkvi~nn-~nP~WNE~-f~F 496 (561)
...+ ++.+++|+||+||-|.. ..+..||+|.+.|+|.|..+ .||+++.+| +||+|+|. |.|
T Consensus 692 Fse~~VdgvIA~t~sV~VISgqFLSd----------rkvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~eepfvF 761 (1189)
T KOG1265|consen 692 FSESPVDGVIAATLSVTVISGQFLSD----------RKVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEEPFVF 761 (1189)
T ss_pred cccCcccceEEeeEEEEEEeeeeccc----------cccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccCCccc
Confidence 2222 35789999999997742 12346999999999999874 489998876 89999855 999
Q ss_pred e-eecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEE
Q 008582 497 P-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 497 ~-v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
. |..|++|+|||.|+++. +.|||+..+||+.|+.|||||.|+++.|+|+..+.|||.|+.
T Consensus 762 ~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~ 822 (1189)
T KOG1265|consen 762 RKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVL 822 (1189)
T ss_pred ceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEe
Confidence 6 77999999999999965 689999999999999999999999999999999999999975
|
|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-114 Score=925.47 Aligned_cols=511 Identities=32% Similarity=0.503 Sum_probs=394.3
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCCCCCCCCC-CCccCC-CCCC
Q 008582 38 GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHD-MTAP 114 (561)
Q Consensus 38 ~~l~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~~-~~~~~d-m~~P 114 (561)
.+.+..+|++||..+|++..++. ..++..+.+|-+. ...-.+..-|+++.|..||+|..|+.+++. ..|..| |+.|
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D-~~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d~Mn~P 314 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD-TMRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMDDMNNP 314 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh-hhhhccCcceeHHHHHHHHhhcccccccccccccchhhhcCc
Confidence 46889999999999999976543 3456666666532 111123457999999999999999999865 456665 9999
Q ss_pred ccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhhcccc
Q 008582 115 VSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA 194 (561)
Q Consensus 115 Ls~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~ 194 (561)
||||||+||||||||||||.++||.|+|+|||++||||||||||||+++ .||||||||+||||.|.||+++||+|||++
T Consensus 315 LShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd~-~pvIyHG~T~TtKIkf~DVlhtIkdhAFvt 393 (1267)
T KOG1264|consen 315 LSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPDG-KPVIYHGHTRTTKIKFDDVLHTIKDHAFVT 393 (1267)
T ss_pred chhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCCC-CceEEeccceeeeeehHHHHHHHHhhceec
Confidence 9999999999999999999999999999999999999999999999984 799999999999999999999999999999
Q ss_pred CCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCch--hhhHh--------
Q 008582 195 SEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEY--LEAKE-------- 263 (561)
Q Consensus 195 S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~--~~~~~-------- 263 (561)
|+||||||||.|||.+||..||+.+++||||+|++.|.+ ....||||.+||.|||||.||.+.. +....
T Consensus 394 SeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~edd~~ 473 (1267)
T KOG1264|consen 394 SEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKEDDHK 473 (1267)
T ss_pred cCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcccccch
Confidence 999999999999999999999999999999999997754 5789999999999999999986432 11100
Q ss_pred --hhh---------------------------------hhc----cccCCCCCCcc----ccc-----------------
Q 008582 264 --EKE---------------------------------KEN----DSQRGKGSADE----EAW----------------- 283 (561)
Q Consensus 264 --~~~---------------------------------~~~----~~~~~~~~~~~----~~~----------------- 283 (561)
.+. ..+ +.++....+++ +.|
T Consensus 474 nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee~~kd~s~s~ElH~~E~WFHgkle~R~eAekll~e 553 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEEVPKDISPSTELHFGEKWFHGKLEGRTEAEKLLQE 553 (1267)
T ss_pred hhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCcccccccCCcchhhccchhhhhcccccchHHHHHHHH
Confidence 000 000 00000000000 000
Q ss_pred -----cC-------------------------------------------------------------------------
Q 008582 284 -----GK------------------------------------------------------------------------- 285 (561)
Q Consensus 284 -----~~------------------------------------------------------------------------- 285 (561)
|.
T Consensus 554 ycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF~m 633 (1267)
T KOG1264|consen 554 YCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAEFEM 633 (1267)
T ss_pred HHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccceEE
Confidence 00
Q ss_pred ----CCC-------------Ccccc-------------------CC----------------------------------
Q 008582 286 ----EVP-------------NLKSL-------------------NN---------------------------------- 295 (561)
Q Consensus 286 ----~~~-------------~~~~~-------------------~~---------------------------------- 295 (561)
++| ++... ..
T Consensus 634 ~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~F 713 (1267)
T KOG1264|consen 634 RLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLGTSAF 713 (1267)
T ss_pred EecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEeccHHH
Confidence 000 00000 00
Q ss_pred -----------------------------------CCC---------------------C--------------CCCCC-
Q 008582 296 -----------------------------------SAC---------------------D--------------KDDFD- 304 (561)
Q Consensus 296 -----------------------------------~~~---------------------~--------------~~~~~- 304 (561)
..| . .++++
T Consensus 714 esLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSF 793 (1267)
T KOG1264|consen 714 ESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSF 793 (1267)
T ss_pred HHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccccc
Confidence 000 0 00000
Q ss_pred --------------------C---------------------C-----CCCCC----------C----------ccc---
Q 008582 305 --------------------G---------------------G-----VDNDE----------E----------DSD--- 315 (561)
Q Consensus 305 --------------------~---------------------~-----~~~~~----------~----------~~~--- 315 (561)
+ + ..++. + .+.
T Consensus 794 pk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~~n~~ 873 (1267)
T KOG1264|consen 794 PKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQGKNQK 873 (1267)
T ss_pred cccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccccCCc
Confidence 0 0 00000 0 000
Q ss_pred -----------------------------------------cc--------cccccchhhhccceeccccccCCcccccc
Q 008582 316 -----------------------------------------DK--------SQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 316 -----------------------------------------~~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
.+ ....+|.|+|+||+|+..+|+..- + +
T Consensus 874 ~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~~-~-~- 950 (1267)
T KOG1264|consen 874 SFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTKD-N-L- 950 (1267)
T ss_pred ceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCccc-c-c-
Confidence 00 012356688899999888774311 1 1
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecc------------
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ------------ 414 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~Q------------ 414 (561)
.++....|+||.|+|+.|++...+.+|+.||+++|+||||+|.|+|||||||+++|+|||||||||||
T Consensus 951 ~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDKpMQmNqa~ 1030 (1267)
T KOG1264|consen 951 ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDKPMQMNQAL 1030 (1267)
T ss_pred ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCchhhhhHHH
Confidence 12334568999999999999988999999999999999999999999999999999999999999999
Q ss_pred ---cCCCCcccCCCCC-----CC---------CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceee
Q 008582 415 ---TGPHNEVFDPKVK-----LP---------AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK 477 (561)
Q Consensus 415 ---nG~~Gyvl~P~~~-----~p---------~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~ 477 (561)
||.|||||+|..- -| .+.+|.|+||.|..|+.. ..+..-|+|+|++.|.+.|..++
T Consensus 1031 F~~ngrcGYvLqPs~Mrte~fdP~n~e~~~~l~p~~lsv~vigaRHL~k~-------gr~i~cPfVevEiiGa~~Dt~~~ 1103 (1267)
T KOG1264|consen 1031 FSLNGRCGYVLQPSSMRTEKFDPMNPESQRGLLPMTLSVKVLGARHLPKL-------GRSIACPFVEVEIIGAEYDTNKF 1103 (1267)
T ss_pred hhcCCceeeEecchhcccccCCCCChHHhccccceEEEEEEeeccccccC-------CCCccCCcEEEEEeccccCCCce
Confidence 8999999999531 11 135799999999998732 11334589999999999999988
Q ss_pred ecccCC-CCCCCccc-cEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEE
Q 008582 478 KTKTLE-DNWIPSWN-EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLL 555 (561)
Q Consensus 478 kTkvi~-nn~nP~WN-E~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLl 555 (561)
+|+++. |++||+|| |+|+|.|.+|+.|+|||.|+|.|+.+...||||++.||.+++.|||.|||+|..-+.++-|+||
T Consensus 1104 ~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~GfRsVpLkN~ySEdlELaSLL 1183 (1267)
T KOG1264|consen 1104 KTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGFRSVPLKNGYSEDLELASLL 1183 (1267)
T ss_pred EEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccceeeecccCchhhhhhhhhe
Confidence 777665 55999999 9999999999999999999999999988899999999999999999999999999999999999
Q ss_pred EEEEE
Q 008582 556 MHFEF 560 (561)
Q Consensus 556 v~~~f 560 (561)
|.++.
T Consensus 1184 v~i~m 1188 (1267)
T KOG1264|consen 1184 VFIEM 1188 (1267)
T ss_pred eeeEe
Confidence 99985
|
|
| >cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-103 Score=772.52 Aligned_cols=245 Identities=37% Similarity=0.562 Sum_probs=225.1
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999764 445799999999999999999742
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
++++|++|+.|+.++.++++.....
T Consensus 150 -------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~~~~ 174 (258)
T cd08629 150 -------------------------------------------------------LVPELSDMIIYCKSVHFGGFSSPGT 174 (258)
T ss_pred -------------------------------------------------------ccHHHHHHHHHhcCCCCCCccchhh
Confidence 1356888888877777777766544
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
..+..++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+-+-
T Consensus 175 ~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~ 246 (258)
T cd08629 175 SGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGP 246 (258)
T ss_pred cCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCCh
Confidence 334567899999999999999999999999999999999999999999999999999999999999996443
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain |
| >cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-102 Score=764.40 Aligned_cols=240 Identities=35% Similarity=0.549 Sum_probs=211.2
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+||||.|+||+|||++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|++.+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~------- 152 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRA------- 152 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchh-------
Confidence 999999999999999999999999999999999999999998653 34578999999999999999985322
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
+++|+.|..+..+.++....
T Consensus 153 ------------------------------------------------------------Ls~l~~y~~~~~~~~~~~~~ 172 (254)
T cd08633 153 ------------------------------------------------------------LSDLVKYTKSVRVHDIETEA 172 (254)
T ss_pred ------------------------------------------------------------hhHHhhhcccCCcCcccccc
Confidence 22222222222222222111
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-
T Consensus 173 ---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~ 242 (254)
T cd08633 173 ---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGR 242 (254)
T ss_pred ---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCc
Confidence 1246899999999999999999999999999999999999999999999999999999999999996443
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m |
| >cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-102 Score=766.10 Aligned_cols=244 Identities=34% Similarity=0.599 Sum_probs=223.4
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999999841
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
++++|++|+.|+.++.++++....
T Consensus 151 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 174 (258)
T cd08630 151 --------------------------------------------------------ISPELSALAVYCQATRLRTLEPAP 174 (258)
T ss_pred --------------------------------------------------------chHHHHhhHhhcccccCCCcchhh
Confidence 246789999888877777776543
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
.. ....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-
T Consensus 175 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~ 246 (258)
T cd08630 175 VQ-PQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGY 246 (258)
T ss_pred hc-CCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCCh
Confidence 11 2245889999999999999999999999999999999999999999999999999999999999996543
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh |
| >cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-102 Score=759.50 Aligned_cols=240 Identities=33% Similarity=0.543 Sum_probs=210.1
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++. +....||||++||||||||+|++...
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~e------- 152 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRD------- 152 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHH-------
Confidence 999999999999999999999999999999999999999998652 34678999999999999999985221
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
+++|+.++.+..+.++.+.
T Consensus 153 ------------------------------------------------------------ls~l~~~~~~~~~~~~~~~- 171 (253)
T cd08632 153 ------------------------------------------------------------LSDLVVYTNSVAAQDIVDD- 171 (253)
T ss_pred ------------------------------------------------------------HHhhhhhccCcccccchhc-
Confidence 2222222222211111110
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+-+-|
T Consensus 172 ---~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~ 242 (253)
T cd08632 172 ---GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRM 242 (253)
T ss_pred ---CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChh
Confidence 11257899999999999999999999999999999999999999999999999999999999999965443
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m |
| >cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-102 Score=764.32 Aligned_cols=243 Identities=35% Similarity=0.540 Sum_probs=213.3
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +++|||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhh
Q 008582 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLE 260 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (561)
|++|||++|+||||||||||| +.+||++||+||+++|||+|+.++.+. ...||||++||||||||+|+.+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~---- 156 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYE---- 156 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeecccc----
Confidence 999999999999999999999 799999999999999999999977432 3789999999999999999731
Q ss_pred hHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCC
Q 008582 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (561)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (561)
++++|+.|+.+..+.+
T Consensus 157 ----------------------------------------------------------------els~lv~y~~~~kf~~ 172 (261)
T cd08624 157 ----------------------------------------------------------------EMSSLVNYIQPTKFVS 172 (261)
T ss_pred ----------------------------------------------------------------cchhhhcccCCcCCCC
Confidence 1334444443333333
Q ss_pred cccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
|....... ..++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-|
T Consensus 173 f~~~~~~~-~~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~ 250 (261)
T cd08624 173 FEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLP 250 (261)
T ss_pred cccccccC-CcceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChh
Confidence 43322211 2356899999999999999999999999999999999999999999999999999999999999965543
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-102 Score=762.84 Aligned_cols=243 Identities=35% Similarity=0.543 Sum_probs=216.7
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~k---------- 149 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEeccc----------
Confidence 99999999999999999999999999999999999999999976443 479999999999999999872
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
++++|++|+.|..+..+.++....
T Consensus 150 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 173 (257)
T cd08595 150 --------------------------------------------------------IAKALSDLVIYTKSEKFCSFTHSR 173 (257)
T ss_pred --------------------------------------------------------cChhHHHHhhhcCCcCCCCccccc
Confidence 013566776665544333443322
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-
T Consensus 174 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~ 245 (257)
T cd08595 174 DN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGA 245 (257)
T ss_pred cc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCCh
Confidence 11 1246789999999999999999999999999999999999999999999999999999999999996543
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) |
| >cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-101 Score=761.45 Aligned_cols=243 Identities=34% Similarity=0.580 Sum_probs=218.9
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977542 4799999999999999999741
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
++++|++|+.|..+..+.++...-
T Consensus 151 --------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~~~~ 174 (258)
T cd08631 151 --------------------------------------------------------LSPELSDCVIYCKSVSFRSFTHSR 174 (258)
T ss_pred --------------------------------------------------------ccHHHHHhHhhhcccccCCccccc
Confidence 135677887776665554444221
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
. ....++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+-+
T Consensus 175 ~-~~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d 245 (258)
T cd08631 175 E-HYHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAG 245 (258)
T ss_pred c-cCccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCC
Confidence 1 1123678999999999999999999999999999999999999999999999999999999999999544
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which |
| >cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-101 Score=759.36 Aligned_cols=237 Identities=35% Similarity=0.564 Sum_probs=212.6
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
.|||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++ +||||+|||||||+|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC---C--CCCCCCChhhccCcEEEecCCCCchhhhH
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS---E--CLKEFPSPESLKRRIIISTKPPKEYLEAK 262 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~---~--~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 262 (561)
++|||++|+||||||||||||.+||.+||+||+++|||+||.++. + ....||||++||||||||+|++
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~------- 152 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKA------- 152 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCc-------
Confidence 999999999999999999999999999999999999999998652 1 2468999999999999999873
Q ss_pred hhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcc
Q 008582 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLK 342 (561)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 342 (561)
+++++|+.|..+..+.++.
T Consensus 153 -------------------------------------------------------------~els~l~~y~~~~k~~~~~ 171 (254)
T cd08596 153 -------------------------------------------------------------PELSDLVIYCQAVKFPGLS 171 (254)
T ss_pred -------------------------------------------------------------HHHHHHHHHhcCccCCCCC
Confidence 2345555543333233333
Q ss_pred cccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 343 ECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 343 ~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
.+..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+-+-
T Consensus 172 -----~~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~ 242 (254)
T cd08596 172 -----TPKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDL 242 (254)
T ss_pred -----ccccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCCh
Confidence 13457899999999999999999999999999999999999999999999999999999999999995443
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core |
| >cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-101 Score=757.25 Aligned_cols=240 Identities=35% Similarity=0.547 Sum_probs=207.2
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +++||+|+||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhhh
Q 008582 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (561)
|++|||++|+||||||||||||.+||.+||+||+++|||+||.++.+. ...||||++||||||||+|+..+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~---- 156 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSS---- 156 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhh----
Confidence 999999999999999999999999999999999999999999976432 46899999999999999997311
Q ss_pred HhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCc
Q 008582 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (561)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (561)
|++|..+..+.++
T Consensus 157 -------------------------------------------------------------------L~~y~~~~~~~~~ 169 (257)
T cd08626 157 -------------------------------------------------------------------LVNYAQPVKFQGF 169 (257)
T ss_pred -------------------------------------------------------------------hhcccccCCCCCc
Confidence 0000000000111
Q ss_pred ccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
...... ...++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-|
T Consensus 170 ~~~~~~-~~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~ 246 (257)
T cd08626 170 DVAEER-NIHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLG 246 (257)
T ss_pred Cchhhc-CCCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChh
Confidence 111100 11357899999999999999999999999999999999999999999999999999999999999965433
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-100 Score=755.55 Aligned_cols=238 Identities=34% Similarity=0.530 Sum_probs=208.6
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCC-CCCceEEeCCcccccchHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||||+||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhh
Q 008582 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (561)
|++|||++|+||||||||||| +++||.+||+||+++|||+||+++.+ ....||||++||||||||+|+..
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs---- 156 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMS---- 156 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchh----
Confidence 999999999999999999999 59999999999999999999997643 24689999999999999998731
Q ss_pred hHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCC
Q 008582 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (561)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (561)
+|++|+.+..+.+
T Consensus 157 -------------------------------------------------------------------~Lv~y~~~v~f~~ 169 (258)
T cd08623 157 -------------------------------------------------------------------NLVNYIQPVKFES 169 (258)
T ss_pred -------------------------------------------------------------------cccccccCcccCC
Confidence 1222222222222
Q ss_pred cccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
|...... ...++++||+|+++.+++++.+.+|++||++||+||||+|+|+|||||||++||++||||||||||+.+
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d 245 (258)
T cd08623 170 FEASKKR-NKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVD 245 (258)
T ss_pred ccccccc-CCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCC
Confidence 2221111 123578999999999999999999999999999999999999999999999999999999999999644
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-100 Score=753.50 Aligned_cols=238 Identities=37% Similarity=0.564 Sum_probs=207.4
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCC-CCceEEeCCcccccchHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~-~~piv~HG~Tlts~i~f~dvi~a 186 (561)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ +||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhhh
Q 008582 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEA 261 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (561)
|++|||++|+||||||||||||.+||.+||+||+++|||+||.++.+ ....||||++||||||||+|+..+
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~---- 156 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSS---- 156 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchh----
Confidence 99999999999999999999999999999999999999999997643 236899999999999999998311
Q ss_pred HhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCc
Q 008582 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (561)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (561)
|++|..+..+.++
T Consensus 157 -------------------------------------------------------------------L~~y~~~~~f~~~ 169 (257)
T cd08591 157 -------------------------------------------------------------------LVNYIQPVKFQGF 169 (257)
T ss_pred -------------------------------------------------------------------hhccccCCCCCCc
Confidence 0111000000111
Q ss_pred ccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
...... ...++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+-+
T Consensus 170 ~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d 244 (257)
T cd08591 170 EVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPD 244 (257)
T ss_pred cchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCC
Confidence 111111 123578999999999999999999999999999999999999999999999999999999999999544
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod |
| >cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-100 Score=755.10 Aligned_cols=243 Identities=37% Similarity=0.593 Sum_probs=219.3
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||||+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+||||||||||||.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999764 335789999999999999999741
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
+.+++++|+.|..+..+.++.+...
T Consensus 150 -------------------------------------------------------i~~els~L~~~~~~~k~~~~~~~~~ 174 (257)
T cd08593 150 -------------------------------------------------------LAKELSDLVIYCKSVHFKSFEHSKE 174 (257)
T ss_pred -------------------------------------------------------ccHHHHhhhhhcccccCCChhhhcc
Confidence 1356777776655444455544332
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
.....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+
T Consensus 175 -~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D 244 (257)
T cd08593 175 -NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPG 244 (257)
T ss_pred -cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCC
Confidence 2345689999999999999999999999999999999999999999999999999999999999999644
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is |
| >cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-100 Score=756.14 Aligned_cols=239 Identities=34% Similarity=0.514 Sum_probs=209.4
Q ss_pred CCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCC-CCCceEEeCCcccccchHHHHHHHH
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ ++||+|+||||||++|+|+|||+||
T Consensus 2 ~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~I 81 (258)
T cd08625 2 DDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEAI 81 (258)
T ss_pred CccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999953 4689999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhhh
Q 008582 188 KEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEA 261 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (561)
++|||++|+||||||||||| |.+||++||++|++||||+|++++.+ +...||||++||||||||+|+..
T Consensus 82 ~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklS----- 156 (258)
T cd08625 82 AESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMS----- 156 (258)
T ss_pred HHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeecc-----
Confidence 99999999999999999999 69999999999999999999997643 24689999999999999999741
Q ss_pred HhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCc
Q 008582 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (561)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (561)
+|++|+.+..+.++
T Consensus 157 ------------------------------------------------------------------dLvvy~~~vkf~~f 170 (258)
T cd08625 157 ------------------------------------------------------------------TLVNYIEPVKFKSF 170 (258)
T ss_pred ------------------------------------------------------------------cccceecccccCCc
Confidence 11122222222222
Q ss_pred ccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
.+.... ...++|+||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++||||||||||+.+-|
T Consensus 171 ~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~ 247 (258)
T cd08625 171 EAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLA 247 (258)
T ss_pred hhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcc
Confidence 222111 12457899999999999999999999999999999999999999999999999999999999999975544
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=747.79 Aligned_cols=242 Identities=36% Similarity=0.605 Sum_probs=216.4
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
.|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++. +....||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~----------- 148 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKL----------- 148 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCc-----------
Confidence 999999999999999999999999999999999999999998664 44679999999999999999873
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
+++||++|+.|+.+..+. +. .+.
T Consensus 149 -------------------------------------------------------~~~eLs~l~~y~~~~~~~-~~-~~~ 171 (254)
T cd08628 149 -------------------------------------------------------IAIELSDLVVYCKPTSKT-KD-NLE 171 (254)
T ss_pred -------------------------------------------------------CCHHHHhhHhhhcccccc-cC-Ccc
Confidence 135677887776543321 11 111
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
.+...+++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++||||||||||+.+-+
T Consensus 172 -~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~ 243 (254)
T cd08628 172 -NPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKY 243 (254)
T ss_pred -cccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChh
Confidence 123457899999999999999999999999999999999999999999999999999999999999975544
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw |
| >cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-99 Score=732.46 Aligned_cols=213 Identities=40% Similarity=0.650 Sum_probs=202.0
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++||+||||||||||||+||||.|+||+|||++||++||||||||||||++ +||||||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999752
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
++++||+|+++.+++++.+.+|++||++||+||||+|+|+|||||||++||++||||||||||+.+-
T Consensus 149 ------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~ 215 (227)
T cd08594 149 ------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGR 215 (227)
T ss_pred ------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCCh
Confidence 2568999999999999999999999999999999999999999999999999999999999996553
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, |
| >cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-97 Score=734.73 Aligned_cols=246 Identities=35% Similarity=0.576 Sum_probs=220.6
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++. +....||||++||||||||+|+++.
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------- 150 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------- 150 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------
Confidence 999999999999999999999999999999999999999999774 4567899999999999999998521
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
.+++++|++|+.|..+..+.++.....
T Consensus 151 -----------------------------------------------------~~~~~els~l~~~~~~~~~~~~~~~~~ 177 (260)
T cd08597 151 -----------------------------------------------------RKLCKELSDLVSLCKSVRFQDFPTSAQ 177 (260)
T ss_pred -----------------------------------------------------ccccHHHHhhhhhhcCcccCCcccccc
Confidence 012467888888765544444443211
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
....++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+-+
T Consensus 178 -~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d 247 (260)
T cd08597 178 -NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPG 247 (260)
T ss_pred -ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCC
Confidence 2234678999999999999999999999999999999999999999999999999999999999999543
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment |
| >cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-97 Score=715.15 Aligned_cols=215 Identities=40% Similarity=0.675 Sum_probs=198.8
Q ss_pred CCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHh
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (561)
|||++|||||||||||||||+||||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||+
T Consensus 2 ~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I~ 80 (229)
T cd08627 2 EEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTIK 80 (229)
T ss_pred ccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999987 5799999999999999999999999
Q ss_pred hhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhHhhhhh
Q 008582 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267 (561)
Q Consensus 189 ~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~ 267 (561)
+|||++|+||||||||||||.+||.+||+||+++|||+||.++.+ ....||||++||||||||+|+..
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~----------- 149 (229)
T cd08627 81 EHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY----------- 149 (229)
T ss_pred HhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc-----------
Confidence 999999999999999999999999999999999999999997644 46789999999999999998720
Q ss_pred hccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccccc
Q 008582 268 ENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKV 347 (561)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 347 (561)
+
T Consensus 150 --------------------------------------------------------~----------------------- 150 (229)
T cd08627 150 --------------------------------------------------------R----------------------- 150 (229)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred CCCceeeeecCHHHHHHHHh-hcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 348 DPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 348 ~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
.++||+|+++.++++ ..+.+|++||++||+||||+|+|+|||||||+.||++||||||||||+.+-+
T Consensus 151 -----~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~ 218 (229)
T cd08627 151 -----DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKP 218 (229)
T ss_pred -----ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcc
Confidence 135788888888875 3568899999999999999999999999999999999999999999965543
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw |
| >cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-96 Score=716.32 Aligned_cols=213 Identities=43% Similarity=0.709 Sum_probs=202.7
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
|+|||++|+|||||||||||+.+||.+||++|+++|||+||.++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999987654 38999999999999999752
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
.+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++||||||||||+.+-
T Consensus 148 -----~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~ 214 (226)
T cd08558 148 -----YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDL 214 (226)
T ss_pred -----ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCCh
Confidence 2568999999999999999999999999999999999999999999999999999999999996543
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki |
| >cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-96 Score=715.95 Aligned_cols=217 Identities=39% Similarity=0.667 Sum_probs=202.9
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
.|||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999975 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3578999999999999999860 0
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
+
T Consensus 150 ---------------------------------------------------------~---------------------- 150 (231)
T cd08598 150 ---------------------------------------------------------K---------------------- 150 (231)
T ss_pred ---------------------------------------------------------C----------------------
Confidence 0
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+-+
T Consensus 151 ---~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d 218 (231)
T cd08598 151 ---TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYD 218 (231)
T ss_pred ---CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCC
Confidence 01257899999999999999999999999999999999999999999999999999999999999543
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro |
| >cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-95 Score=703.44 Aligned_cols=216 Identities=40% Similarity=0.686 Sum_probs=201.7
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+||||||||||||.+||.+||+||+++|||+||.++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999987643 4678999999999999999761
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeecCHHHHHHHH-hhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 347 VDPDKVRRLSLSEQQLENAV-GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~-~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+-+-|
T Consensus 149 ----~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~ 218 (229)
T cd08592 149 ----FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKP 218 (229)
T ss_pred ----cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChh
Confidence 0135689999999998 48899999999999999999999999999999999999999999999965433
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl |
| >cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-94 Score=697.57 Aligned_cols=213 Identities=61% Similarity=1.032 Sum_probs=201.2
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||.+|+|||||||||||+.+||.+||++|+++|||+||.|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987544 379999999999999998641
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeecCHHHHHHHHh-hcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
.+++||+|+++.++.+ +++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+.+
T Consensus 149 -----~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d 215 (228)
T cd08599 149 -----VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYD 215 (228)
T ss_pred -----ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCC
Confidence 2457999999999996 88999999999999999999999999999999999999999999999533
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi |
| >cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-58 Score=466.02 Aligned_cols=238 Identities=24% Similarity=0.374 Sum_probs=198.0
Q ss_pred cCCCCCCccceeecccccccccCCCCC-----CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~-----g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (561)
++||++||+||||++||||||.|+|+. |+++.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 589999999999999999999999998 9999999999999999999999999865 579999999999 999999
Q ss_pred HHHHHhhhccccCCCceEEEeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecCCCCchhh
Q 008582 183 CLRSIKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLE 260 (561)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hcs~--~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (561)
||++|+++||..++||||||||+||+. +||++||++|+++||++|+.|+......+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998765567899999999999999987521100
Q ss_pred hHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCC
Q 008582 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (561)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (561)
. +.+. . . +. .+
T Consensus 159 ~----------------------~~~~----------------~--------~------------~~-----------~~ 169 (274)
T cd00137 159 T----------------------GSSN----------------D--------T------------GF-----------VS 169 (274)
T ss_pred c----------------------cccc----------------c--------c------------Cc-----------CC
Confidence 0 0000 0 0 00 00
Q ss_pred cccccccCCCceeeeecCHHHHHH----HHhhcchhHHHhhccceeeeeCCCCC---------CCCCCCCccccccc---
Q 008582 341 LKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDIVRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH--- 404 (561)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~----~~~~~~~~~~~~~~~~l~RvYP~g~R---------idSSNf~P~~~W~~--- 404 (561)
+..... .....+++|++|.++.+ +..+...+++.+|+++|+|+||+|+| ++||||+|+.+|++
T Consensus 170 ~~~~~~-~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~ 248 (274)
T cd00137 170 FEFSTQ-KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPA 248 (274)
T ss_pred cccccc-cCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccC
Confidence 000000 00123568888888854 34455667899999999999999999 99999999999999
Q ss_pred ccceeeeecccCC
Q 008582 405 GAQMVAFNMQTGP 417 (561)
Q Consensus 405 G~QmVALN~QnG~ 417 (561)
||||||||||+.+
T Consensus 249 g~qiValdfqt~~ 261 (274)
T cd00137 249 GCGIVILDFQTMD 261 (274)
T ss_pred CceEEEeeCcCCC
Confidence 9999999999643
|
This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a |
| >smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=303.84 Aligned_cols=134 Identities=46% Similarity=0.816 Sum_probs=128.1
Q ss_pred CCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHh
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (561)
|||++||+||||++|||||++|+|+.|+++..+|+++|..||||+|||||++++ ++|+|+||+|+++.++|+||+++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 4699999999999999999999999
Q ss_pred hhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhh
Q 008582 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPES 243 (561)
Q Consensus 189 ~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~ 243 (561)
++||..+.+||||+||+||+.++|.+||++|+++||++|+.|+.. ....+|||++
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs. |
| >PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=286.01 Aligned_cols=143 Identities=29% Similarity=0.567 Sum_probs=128.8
Q ss_pred CCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhh
Q 008582 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY 190 (561)
Q Consensus 111 m~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~ 190 (561)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||++++ ++|.|+||+++++.++|+||+++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999765 369999999999999999999999999
Q ss_pred ccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecCC
Q 008582 191 AFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTKP 254 (561)
Q Consensus 191 AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 254 (561)
+|..+.+||||++++||+.++|..+|++|+++||++|+.++.. ....+|+|++|||||||.+||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999997754 468899999999999999875
|
1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B .... |
| >smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=252.35 Aligned_cols=99 Identities=38% Similarity=0.574 Sum_probs=88.6
Q ss_pred hccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCccccccccc
Q 008582 327 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406 (561)
Q Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~ 406 (561)
++||+|+.++++.++.......+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47889988887777766554322 46899999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeecc---------------cCCCCcccCCCC
Q 008582 407 QMVAFNMQ---------------TGPHNEVFDPKV 426 (561)
Q Consensus 407 QmVALN~Q---------------nG~~Gyvl~P~~ 426 (561)
|||||||| ||+|||||||..
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~ 114 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDF 114 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCC
Confidence 99999999 899999999963
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs. |
| >PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=254.30 Aligned_cols=101 Identities=32% Similarity=0.516 Sum_probs=73.5
Q ss_pred hhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCccccccc
Q 008582 325 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 404 (561)
Q Consensus 325 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~ 404 (561)
||++|++|+.+..+.++...-.. ....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 68999998877766555432221 22578999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeecc---------------cCCCCcccCCCC
Q 008582 405 GAQMVAFNMQ---------------TGPHNEVFDPKV 426 (561)
Q Consensus 405 G~QmVALN~Q---------------nG~~Gyvl~P~~ 426 (561)
|||||||||| ||+|||||||..
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~ 116 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEY 116 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GG
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchh
Confidence 9999999999 899999999964
|
1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=200.95 Aligned_cols=146 Identities=25% Similarity=0.433 Sum_probs=127.7
Q ss_pred CCCCCCccceeecccccccccC------------CCC--CCCCChHHHHHHHhCCCcEEEEEeeCCCC------------
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTG------------NQL--NSDCSDVPIIRALQKGVRVIELDIWPNSK------------ 162 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g------------~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~------------ 162 (561)
.+.+.||+||++-.|||+|..| +|+ ....+-.....+|..|+|.+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3567899999999999999998 777 34455667889999999999999996443
Q ss_pred -------CCCceEEeCCcc---cccchHHHHHHHHhhhccc-cCCCceEEEeccCCCH------------HHHHHHHHHH
Q 008582 163 -------KDNVDVLHGGTM---TAPVELIKCLRSIKEYAFV-ASEYPVVITLEDHLTP------------DLQAKVAEMV 219 (561)
Q Consensus 163 -------~~~piv~HG~Tl---ts~i~f~dvi~aI~~~AF~-~S~yPvIlSlE~Hcs~------------~qQ~~ma~~l 219 (561)
+++.-|+|+.++ |+..+|.+|++.||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 345789999998 8999999999999999998 8999999999999987 7899999999
Q ss_pred HHHhhc-cccCCCC-----CCC------CCCCChhhccCcEEEecCC
Q 008582 220 TQTLGE-ILFTPGS-----ECL------KEFPSPESLKRRIIISTKP 254 (561)
Q Consensus 220 ~~i~Gd-~L~~~~~-----~~~------~~lPSP~~Lk~KIlik~K~ 254 (561)
+++||+ +||+|+. ..+ ..+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999874 222 6899999999999999875
|
This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy |
| >cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-19 Score=159.25 Aligned_cols=125 Identities=43% Similarity=0.646 Sum_probs=108.9
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC-CceeeecccCCCCC-CCccccEEEEeeecCCceEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELALLRIE 509 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~-d~~k~kTkvi~nn~-nP~WNE~f~F~v~~pela~Lrf~ 509 (561)
..|+|+|++|++|+... ....+.+||||+|.+.+.+. +..+.||+++.++. ||.|||+|.|.+..++.+.|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~~----~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKPK----GDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCCC----CCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 47999999999997421 01245679999999988665 56778999988775 99999999999988888899999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|+|.+.. ++++||++.++++.|..||++++|++++|++..+++|+|+++++
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~ 128 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT 128 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence 9999876 79999999999999999999999999999988899999999984
|
PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking |
| >cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-18 Score=175.59 Aligned_cols=143 Identities=22% Similarity=0.374 Sum_probs=121.1
Q ss_pred cCCCCCCccceeecccccccccCCCCC----------CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccc-
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN----------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA- 176 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~----------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts- 176 (561)
..||+.||++|+|-.|||+|..+..-. +....-.+..+|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 469999999999999999999876532 233344578999999999999999864 4689999987654
Q ss_pred ------cchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC----CCCCCCChhhcc-
Q 008582 177 ------PVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE----CLKEFPSPESLK- 245 (561)
Q Consensus 177 ------~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~----~~~~lPSP~~Lk- 245 (561)
...|++|++.|+++++....++|||.||+|++..++..+.+.|+++||++||.|+.. .....|++++++
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888899999999999999998642 146789999996
Q ss_pred -CcEEEec
Q 008582 246 -RRIIIST 252 (561)
Q Consensus 246 -~KIlik~ 252 (561)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 7776654
|
This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity. |
| >cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.8e-17 Score=145.74 Aligned_cols=103 Identities=26% Similarity=0.379 Sum_probs=84.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccC--CCceeeecccCCCCCCCccccEEEEeeec---CCceEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 507 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p--~d~~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~Lr 507 (561)
+|+|+|++|++|+.. + .+.+||||+|.+.|.. ....++||+++.+++||+|||+|.|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~~------d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKWQ------T-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCcc------c-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 489999999999642 2 2678999999998732 33345689999999999999999999974 3457899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~ 542 (561)
|.|+|+|..+++++||++.+||..+..+- .|.||.
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 99999998778999999999999998664 466774
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi |
| >cd08677 C2A_Synaptotagmin-13 C2 domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-16 Score=141.67 Aligned_cols=101 Identities=18% Similarity=0.187 Sum_probs=84.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|..+.|+|+|+.|++|+. .+.+||||+|.+... ....+++|++++++.||+|||+|.|.+...++ ..|
T Consensus 11 ~~~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL 80 (118)
T cd08677 11 KQKAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTL 80 (118)
T ss_pred CcCCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEE
Confidence 456899999999999851 133799999999632 22357799999999999999999999876555 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCccc--CCCceEE
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSEL--KQGIRAV 539 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L--~~GyR~i 539 (561)
.|.|+|+|..+++++||++.+|++.+ ..|.+||
T Consensus 81 ~~~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~W 115 (118)
T cd08677 81 TLTLRCCDRFSRHSTLGELRLKLADVSMMLGAAQW 115 (118)
T ss_pred EEEEEeCCCCCCCceEEEEEEccccccCCccccch
Confidence 99999999999999999999999965 7777765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain |
| >cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.3e-16 Score=143.40 Aligned_cols=114 Identities=13% Similarity=0.205 Sum_probs=90.9
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCC-CCCccccEEEEeeecCCc-eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPEL-ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~v~~pel-a~L 506 (561)
|.+++|+|+|+.|++|+.. .....+||||+|.+.+.+.+..|+||++++++ .||+|||+|.|++..++. ..|
T Consensus 11 p~~~rLtV~VikarnL~~~------~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l 84 (135)
T cd08692 11 AVNSRIQLQILEAQNLPSS------STPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQF 84 (135)
T ss_pred CcCCeEEEEEEEccCCCcc------cCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEE
Confidence 6778999999999999742 12344699999999988888889999999999 479999999999976554 367
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccC-CCceEE-EccCCCCCc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGIRAV-PLHDRKGER 548 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~-~GyR~i-pL~d~~G~~ 548 (561)
.+.|+|.|..+++++||++.++.++.. .|.+|+ .+++.-+++
T Consensus 85 ~v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~m~~~pr~~ 128 (135)
T cd08692 85 LIKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQWKDTIANPEKV 128 (135)
T ss_pred EEEEEeCCCCcCCceEEEEEECCccCCchhhhhHHHHHhCCCCe
Confidence 788899988889999999999998743 457776 444433443
|
Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho |
| >cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12 | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-16 Score=145.43 Aligned_cols=115 Identities=20% Similarity=0.215 Sum_probs=93.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|...+|+|+|+.|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|
T Consensus 12 ~~~~~L~V~Vi~A~nL~~~------~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l 85 (136)
T cd08406 12 PTAERLTVVVVKARNLVWD------NGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSL 85 (136)
T ss_pred CCCCEEEEEEEEeeCCCCc------cCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEE
Confidence 3456899999999999642 33467899999999765544457799999999999999999999865444 679
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
+|.|+|+|..+++++||++.++..+..+|++|+ .+.+.-++++
T Consensus 86 ~~~V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~v 129 (136)
T cd08406 86 RVTVAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKPV 129 (136)
T ss_pred EEEEEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCee
Confidence 999999998889999999999999888898887 4555445543
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl |
| >cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.4e-16 Score=136.88 Aligned_cols=113 Identities=29% Similarity=0.425 Sum_probs=92.2
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|++|+.. +..+.+||||+|.+.+.+ ..++||+++.++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~~------~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITKG------DLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCcc------CCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 78999999999642 334678999999986432 3567999999999999999999998766566899999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCce---EEEccCCCCCcccCeEEEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~GyR---~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.. ++++||++.+|++.+..|.+ +.+|.+. +.+.|.++|++
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999999975 5566543 24578888876
|
A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o |
| >cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I | Back alignment and domain information |
|---|
Probab=99.66 E-value=1e-15 Score=138.13 Aligned_cols=115 Identities=23% Similarity=0.356 Sum_probs=93.6
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-----CCceEEEE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----PELALLRI 508 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-----pela~Lrf 508 (561)
++|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 5799999999963 13345689999999853 57799999999999999999999865 34568999
Q ss_pred EEEecCCCCCCcceEEEEEeCcccC--CC---ceEEEccCCCCCcc-cCeEEEEEEE
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRKGERY-KSVKLLMHFE 559 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~--~G---yR~ipL~d~~G~~~-~~atLlv~~~ 559 (561)
.|||++..+++++||++.+||+.+. .| .+|.+|.+..|+.- ..+.|.|+|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 55 47889987766433 3468888875
|
Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member |
| >cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.65 E-value=3e-15 Score=133.96 Aligned_cols=116 Identities=24% Similarity=0.363 Sum_probs=95.3
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
+|+|+|++|.+|+. .+..+.+||||++.+.+ ....||+++.++.||.|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 48999999999963 23346689999999864 34679999999999999999999986544 579999999
Q ss_pred cCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 513 YDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 513 ~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
++..+++++||++.+++..+..|. .+++|.+.++... .++|.+.+.|
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~-~G~l~l~~~~ 119 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDED-LGYISLVVTL 119 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCccC-ceEEEEEEEE
Confidence 998888999999999999998553 5889998887443 4588888876
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein |
| >cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip) | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.4e-15 Score=134.05 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=93.8
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
+.|.|+|++|++++. .+ ++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 579999999997642 23 46789999999954 5679999876 58999999999998654 35699999
Q ss_pred EecCCCCCCcceEEEEEeCc-ccCCCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVS-ELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~-~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||+|..++|++||.+.+||. .+..|. .|.+|...+|++.. +.|.+.+.|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence 99999899999999999995 687774 58899888888755 478777764
|
Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian |
| >cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.7e-16 Score=157.93 Aligned_cols=144 Identities=22% Similarity=0.293 Sum_probs=125.1
Q ss_pred CCCCCccceeecccccccccCCCCC-------CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHH
Q 008582 110 DMTAPVSHYFIYTGHNSYLTGNQLN-------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (561)
Q Consensus 110 dm~~PLs~YfI~SSHNTYL~g~Ql~-------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (561)
+.+.||+++.|-.|||+|..+.... +.+.-..+...|..|+|++|||||...+++++.|+||.......+|.|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 5788999999999999998877642 334444678999999999999999865446799999988887899999
Q ss_pred HHHHHhhhccccCCCceEEEeccCCCHHH---HHHHHHHHHHHhhccccCCCCCCCCCCCChhhcc-CcEEEecCC
Q 008582 183 CLRSIKEYAFVASEYPVVITLEDHLTPDL---QAKVAEMVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKP 254 (561)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hcs~~q---Q~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 254 (561)
|++.|+++.......+|||.||.+++... +..++++|+++||+.++.+. ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999989999999999998875 89999999999999999875 3346789999999 999998655
|
This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X |
| >cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13 | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.9e-16 Score=140.87 Aligned_cols=117 Identities=21% Similarity=0.207 Sum_probs=91.7
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|..++|+|+|+.|++|+.. +.+....+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|
T Consensus 12 ~~~~~L~V~V~karnL~~~----d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L 87 (138)
T cd08407 12 PAANRLLVVVIKAKNLHSD----QLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSV 87 (138)
T ss_pred CCCCeEEEEEEEecCCCcc----ccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEE
Confidence 4567899999999999642 1111233799999999764444457899999999999999999999876544 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
.|.|+|+|..+++++||++.+++.+..++.+|+ .+++.-++++
T Consensus 88 ~~~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~v 131 (138)
T cd08407 88 ELEVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQI 131 (138)
T ss_pred EEEEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCch
Confidence 999999999999999999999999877777766 5555445543
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy |
| >cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-15 Score=134.90 Aligned_cols=97 Identities=27% Similarity=0.370 Sum_probs=82.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ec--CCceEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SV--PELALLRI 508 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~--pela~Lrf 508 (561)
..|.|+|+.|.+|+.. + .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~~------~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPLL------D-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCCC------C-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 5799999999999642 3 4578999999998766566788999999999999999999987 32 23468999
Q ss_pred EEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
.|||+|..+++++||++.+||..+..+
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccC
Confidence 999999888899999999999998755
|
There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut |
| >cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD) | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.9e-15 Score=137.48 Aligned_cols=125 Identities=25% Similarity=0.382 Sum_probs=100.3
Q ss_pred CceEEEEEEEecCCCCCCCC-------------C---cc--------CCCCCCCceeEEEEeccCCCceeeecccCCCCC
Q 008582 431 KKTLKVTVYMGEGWYYDFPH-------------T---HF--------DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 486 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~-------------~---~~--------~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~ 486 (561)
.++|.|+|+.|++|+..... . .. ...+.+||||+|.+.+. ...||+++.++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~~----~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAGA----RVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECCe----EeeEEEEeCCCC
Confidence 46899999999999852100 0 00 13456799999999652 346899999999
Q ss_pred CCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccC-eEEEEEEEEC
Q 008582 487 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEFI 561 (561)
Q Consensus 487 nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~-atLlv~~~f~ 561 (561)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|++..+ +.|.|+++|+
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999987644 357999999998765 789999999999998876 688999999998764 8999999996
|
PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic |
| >cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.1e-15 Score=136.57 Aligned_cols=117 Identities=22% Similarity=0.344 Sum_probs=95.7
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCCceEEEEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+..+....|.|.|+
T Consensus 1 ~L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~ 69 (150)
T cd04019 1 YLRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVE 69 (150)
T ss_pred CEEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEE
Confidence 38999999999963 23456789999999964 5778998877 599999999999987655568999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC-------ceEEEccCCCC-----C-cccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKG-----E-RYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G-------yR~ipL~d~~G-----~-~~~~atLlv~~~f 560 (561)
|++..+++++||++.+||+.+..| -+|.||.+..| + ....+.|.|++.|
T Consensus 70 d~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~ 131 (150)
T cd04019 70 DRVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL 131 (150)
T ss_pred EecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence 999877899999999999998654 57899998765 2 2345789999887
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates |
| >cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.61 E-value=8e-15 Score=132.51 Aligned_cols=114 Identities=24% Similarity=0.308 Sum_probs=89.3
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
.|.|+|++|++++.- . ..+..+.+||||.|.+.+ .+.||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~A~~~~~l-~--~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d 71 (126)
T cd08379 1 ILEVGILGAQGLDVL-R--AKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFD 71 (126)
T ss_pred CeEEEEEEeECCccc-c--ccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEE
Confidence 489999999994211 1 124457789999999843 5779999999999999999999987654 479999999
Q ss_pred cCCCC------CCcceEEEEEeCcccCCCce---EEEccCCCCCcc-cCeEEE
Q 008582 513 YDMSE------KDDFGGQTCLPVSELKQGIR---AVPLHDRKGERY-KSVKLL 555 (561)
Q Consensus 513 ~d~~~------~dd~iGq~~lpL~~L~~GyR---~ipL~d~~G~~~-~~atLl 555 (561)
++..+ ++++||++.+||+.+..|.+ +.||.+.+++.. ..+.|-
T Consensus 72 ~d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 72 NSQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 98753 79999999999999998864 789987665443 344553
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate |
| >cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.4e-14 Score=128.75 Aligned_cols=118 Identities=24% Similarity=0.381 Sum_probs=97.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|+++.++.||.|||+|.|.+... ...|.|.||
T Consensus 1 g~l~v~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~ 68 (119)
T cd08377 1 GFLQVKVIRASGLAAA------DIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVY 68 (119)
T ss_pred CEEEEEEEeeeCCCCC------CCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEE
Confidence 3689999999999642 3345689999999864 357999999999999999999997532 357899999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc-eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy-R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|++..+++++||++.+++..+..|. ++.+|.+..+..-..++|++.++|+
T Consensus 69 d~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~ 119 (119)
T cd08377 69 DEDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI 119 (119)
T ss_pred ECCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence 9988778999999999999998886 4668988777666678999999986
|
MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran |
| >cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5 | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.7e-15 Score=133.37 Aligned_cols=108 Identities=21% Similarity=0.334 Sum_probs=85.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|.|+|++|++|+... ...+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~~L~V~Vi~a~~L~~~~-----~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~ 87 (125)
T cd04029 13 KTQSLNVHVKECRNLAYGD-----EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQ 87 (125)
T ss_pred CCCeEEEEEEEecCCCccC-----CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEE
Confidence 4568999999999996421 12356899999999644333457799999999999999999999865443 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCC---ceEEEcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~ 542 (561)
|.|||+|..+++++||++.++|.++... -.|.||.
T Consensus 88 ~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l~ 125 (125)
T cd04029 88 LSVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPLH 125 (125)
T ss_pred EEEEECCCCCCCcEEEEEEEeCCcccccCCcccEEECc
Confidence 9999999888999999999999998543 3567763
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2 |
| >cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.8e-15 Score=131.85 Aligned_cols=118 Identities=20% Similarity=0.270 Sum_probs=92.2
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC---ceEEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE 509 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe---la~Lrf~ 509 (561)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++ ...|+|.
T Consensus 1 ~L~V~vi~A~~L~~~------d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMPK------DGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCCC------CCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 489999999999632 3345689999999864 5779999999999999999999987543 2579999
Q ss_pred EEecCCCC-CCcceEEEEEeCcccC-CC---ceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 510 VHEYDMSE-KDDFGGQTCLPVSELK-QG---IRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 510 V~D~d~~~-~dd~iGq~~lpL~~L~-~G---yR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|||.+... ++++||++.++++.+. .| ..+.+|..+....-..+.|.+++.|.
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 126 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYIT 126 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEEc
Confidence 99988765 7999999999999986 45 46778875432222346888888763
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates |
| >cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.6e-14 Score=132.26 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=85.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|.|+|+.|.+|+.. .+..+.+||||++.+........++||++++++.||+|||+|.|.+. .....|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 5799999999999631 02235679999999975444445889999999999999999999997 44567999999
Q ss_pred -ecCCCCCCcceEEEEEeCcccCCCc---eEEEccCC
Q 008582 512 -EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 544 (561)
Q Consensus 512 -D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~ 544 (561)
|++...++++||++.++|+.+..+. .|-+|.+.
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~ 139 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPT 139 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCc
Confidence 5777778999999999999986553 45577653
|
RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as |
| >cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3 | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-14 Score=130.88 Aligned_cols=99 Identities=17% Similarity=0.253 Sum_probs=82.1
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCC-CCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~-~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
....|.|+|+.|++|+.. +. .+.+||||+|.+...+....++||++++++.||+|||+|.|.+...++ ..|
T Consensus 13 ~~~~L~V~V~~a~nL~~~------d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L 86 (128)
T cd08392 13 RTSCLEITIKACRNLAYG------DEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQL 86 (128)
T ss_pred CCCEEEEEEEecCCCCcc------CCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEE
Confidence 346899999999999642 22 256799999999765555568899999999999999999999865443 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQ 534 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~ 534 (561)
.|.|||.+..+++++||++.|||+.+.-
T Consensus 87 ~v~V~~~~~~~~~~~lG~~~i~L~~~~~ 114 (128)
T cd08392 87 QVSVWHSRTLKRRVFLGEVLIPLADWDF 114 (128)
T ss_pred EEEEEeCCCCcCcceEEEEEEEcCCccc
Confidence 9999999988889999999999998854
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids |
| >cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=131.00 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=81.8
Q ss_pred CceEEEEEEEecCCCCCCCCCccCC-CCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~-~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
...|.|+|+.|.+|+.. +. .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 14 ~~~L~V~vi~a~~L~~~------d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~ 87 (125)
T cd08393 14 LRELHVHVIQCQDLAAA------DPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLN 87 (125)
T ss_pred CCEEEEEEEEeCCCCCc------CCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEE
Confidence 46899999999999742 22 246799999999765544557899999999999999999999864433 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|.|||+|..+++++||++.+||..+..+
T Consensus 88 ~~V~d~~~~~~~~~iG~~~i~L~~~~~~ 115 (125)
T cd08393 88 LSVWHRDSLGRNSFLGEVEVDLGSWDWS 115 (125)
T ss_pred EEEEeCCCCCCCcEeEEEEEecCccccC
Confidence 9999999888899999999999998544
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety |
| >cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4 | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.2e-15 Score=134.37 Aligned_cols=113 Identities=20% Similarity=0.185 Sum_probs=91.6
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 508 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf 508 (561)
...|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||.|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~ 87 (136)
T cd08404 14 TNRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEF 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 4579999999999963 234567899999999754433457799999999999999999999865333 46899
Q ss_pred EEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
.|||+|..+++++||++.+++.+...|.+++ .|.+..|+++
T Consensus 88 ~v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 88 LVLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 9999998888999999999999977778776 5567667765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s |
| >cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3) | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-14 Score=133.69 Aligned_cols=108 Identities=24% Similarity=0.279 Sum_probs=87.4
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-----------C
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----------P 501 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-----------p 501 (561)
+|+|+|+.|++|+. ..+.+||||+|.+.+......++||+++.++.||+|||+|.|.+.. +
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 48999999999963 2356799999999875555567899999999999999999999841 1
Q ss_pred ----CceEEEEEEEecCCCCCCcceEEEEEeCcccCCC----ceEEEccCCCCCc
Q 008582 502 ----ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGER 548 (561)
Q Consensus 502 ----ela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G----yR~ipL~d~~G~~ 548 (561)
+...|.|.|||++..++++|||++.|||..+..+ -.|.+|.......
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2357999999999877899999999999999876 2577887655443
|
RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain |
| >cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.1e-14 Score=127.81 Aligned_cols=110 Identities=29% Similarity=0.408 Sum_probs=91.8
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|++|+.. .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 78999999999631 469999999853 477999999999999999999998766667899999999
Q ss_pred CCCCCCcceEEEEEeCcccCC--------CceEEEccCCCCCcccCeEEEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQ--------GIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~--------GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.. ++++||++.++|+.+.. .-+|.+|.+..+.... +.|.+.+.|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~~~-G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGRVG-GELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCccc-eEEEEEEEe
Confidence 866 69999999999999854 2478999888774444 588888877
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate |
| >cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD) | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-14 Score=126.78 Aligned_cols=98 Identities=14% Similarity=0.050 Sum_probs=79.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~V 510 (561)
+.|.|+|++|++|+.... .......+||||+|.+.+ .++||++++++.||+|||+|.|.+...+. ..|.|.|
T Consensus 1 g~l~v~v~~A~~L~~~~~--~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V 73 (108)
T cd04039 1 GVVFMEIKSITDLPPLKN--MTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKV 73 (108)
T ss_pred CEEEEEEEeeeCCCCccc--cCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEE
Confidence 368999999999974210 011123479999999842 46789999999999999999999875444 4799999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
||+|..+++++||++.++|+.|..||
T Consensus 74 ~D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 74 LDKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred EECCCCCCCcceEEEEEEHHHHHhhC
Confidence 99998889999999999999998887
|
PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM |
| >cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42) | Back alignment and domain information |
|---|
Probab=99.56 E-value=4e-14 Score=128.57 Aligned_cols=122 Identities=25% Similarity=0.379 Sum_probs=94.1
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccC--CCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p--~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.|+|+|++|++|+.. +..+.+||||+|.+.+.. ....+.+|++++++.||.|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~~------d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAKK------DIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCcc------cCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 389999999999632 334668999999998641 122356899999999999999999998543 45689999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc---------eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy---------R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
||++..+++++||++.++++++..+- .+.+|....+..-..+.|.+.+.|.
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~ 133 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL 133 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence 99998888999999999999886432 5668875433333456899999884
|
Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-14 Score=133.20 Aligned_cols=115 Identities=20% Similarity=0.252 Sum_probs=92.0
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
+..++|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||.|||+|.|.+...++ ..|
T Consensus 12 ~~~~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l 85 (136)
T cd08402 12 PTAGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHL 85 (136)
T ss_pred CCCCeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEE
Confidence 345689999999999963 233466899999999754444456789999999999999999999865544 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
+|.|||.+..+++++||++.+++.+...++.|+ +|....++++
T Consensus 86 ~~~v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 86 IVTVLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEEEEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 999999998888999999999999988777655 6766666554
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: |
| >cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-14 Score=132.83 Aligned_cols=125 Identities=18% Similarity=0.221 Sum_probs=93.2
Q ss_pred ccceeeeecccCCCCcccCCCCCCCCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC
Q 008582 405 GAQMVAFNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED 484 (561)
Q Consensus 405 G~QmVALN~QnG~~Gyvl~P~~~~p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n 484 (561)
|.-++||.|+ |..+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|+++++
T Consensus 1 G~i~~~l~y~--------------~~~~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~ 60 (135)
T cd08410 1 GELLLSLNYL--------------PSAGRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRG 60 (135)
T ss_pred CcEEEEEEEC--------------CCCCeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccC
Confidence 4446677776 334689999999999963 23446789999999853222234578999999
Q ss_pred CCCCccccEEEEeeecCCc--eEEEEEEEecCCCCCCcceEEEEEeCcccCCC-c-eEEEccCCCCCcc
Q 008582 485 NWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-I-RAVPLHDRKGERY 549 (561)
Q Consensus 485 n~nP~WNE~f~F~v~~pel--a~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G-y-R~ipL~d~~G~~~ 549 (561)
+.||+|||+|.|.+...++ ..|+|.|||+|..+++++||++.|........ - .|-.|++..|+++
T Consensus 61 t~nP~wnE~F~f~i~~~~l~~~~l~~~V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 61 TIDPFYNESFSFKVPQEELENVSLVFTVYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred CCCCccceeEEEeCCHHHhCCCEEEEEEEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 9999999999999865444 36999999999888999999998777665542 2 3346667666664
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta- |
| >cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1) | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.8e-14 Score=126.06 Aligned_cols=116 Identities=19% Similarity=0.267 Sum_probs=91.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+.. +.+||||+|.+.+ ....||++. ++.||.|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~~---------~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPVK---------HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCCC---------CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 4699999999999631 2469999999954 234688874 5799999999999876666667889999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCC-CcccCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG-ERYKSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G-~~~~~atLlv~~~f~ 561 (561)
|.+..+++++||++.+||..+..|. .|.+|....+ ..-..+.|.+++.|.
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~~ 123 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARYS 123 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEEE
Confidence 9998888999999999999998886 4778876543 222346888888773
|
RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki |
| >cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-14 Score=132.12 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=90.9
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|+|+|++|++|+. .+..+.+||||+|.+...+....++||++++++.||.|||+|.|.+...++ ..|.
T Consensus 12 ~~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~ 85 (134)
T cd08403 12 TAGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLI 85 (134)
T ss_pred CCCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEE
Confidence 44689999999999963 234567899999998653333456789999999999999999999754333 4689
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
|.|||++..+++++||++.+|+.....|+.|+ .|....|+++
T Consensus 86 ~~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 86 IAVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 99999998888999999999999888888765 6666666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind |
| >cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.5e-14 Score=126.76 Aligned_cols=99 Identities=23% Similarity=0.289 Sum_probs=81.2
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|+|+|++|++|+.. +..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 14 ~~~~L~V~v~~a~~L~~~------d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~ 85 (124)
T cd08385 14 QSNQLTVGIIQAADLPAM------DMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLV 85 (124)
T ss_pred CCCEEEEEEEEeeCCCCc------cCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEE
Confidence 346899999999999632 2345679999999964 33457799999999999999999999865443 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|.|||++..+++++||++.+||+.+..|.
T Consensus 86 ~~V~d~d~~~~~~~lG~~~i~l~~~~~~~ 114 (124)
T cd08385 86 FSVYDFDRFSKHDLIGEVRVPLLTVDLGH 114 (124)
T ss_pred EEEEeCCCCCCCceeEEEEEecCcccCCC
Confidence 99999998888999999999999986554
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and |
| >cd04041 C2A_fungal C2 domain first repeat; fungal group | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.1e-14 Score=126.75 Aligned_cols=103 Identities=18% Similarity=0.171 Sum_probs=84.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCC-CCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC---ceEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 507 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~-~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe---la~Lr 507 (561)
+.|+|+|++|.+|+.. +.. +.+||||+|.+.+.+ ....+|++++++.||+|||+|.|.+..++ ...|.
T Consensus 1 G~L~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~ 72 (111)
T cd04041 1 GVLVVTIHRATDLPKA------DFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLS 72 (111)
T ss_pred CEEEEEEEEeeCCCcc------cCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEE
Confidence 4699999999999642 233 567999999986532 34579999999999999999999886553 35799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEEEcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~ 542 (561)
|.|||+|..+++++||++.+++..|.+--++.||+
T Consensus 73 ~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 73 CRLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 99999998888999999999999998666777765
|
C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan |
| >cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.4e-14 Score=123.14 Aligned_cols=110 Identities=24% Similarity=0.350 Sum_probs=89.6
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|.+|+.. +..+.+||||++.+.+ .+.||+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 ~~V~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPPM------DDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCCC------CCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 78999999999642 2345689999999853 567999999999999999999998766567899999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
+..+++++||++.++|+.+..+- .+.+|.+. .+.|++.+.+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~ 114 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTL 114 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEe
Confidence 98888999999999999987654 35577654 2467777765
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei |
| >cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-14 Score=130.49 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=88.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|.|+|++|++|+.. +..+.+||||+|.+.+......+.||+++.++.||.|||+|.|.+..+++ ..|.
T Consensus 11 ~~~~L~V~Vi~a~~L~~~------d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~ 84 (133)
T cd08384 11 QRRGLIVGIIRCVNLAAM------DANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLE 84 (133)
T ss_pred CCCEEEEEEEEEcCCCCc------CCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEE
Confidence 457899999999999642 33456899999999754334456799999999999999999999876544 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
|.|||.|..+++++||++.+++.+......++ .++...|+++
T Consensus 85 ~~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 85 ITVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 99999998888999999999998754444333 5655555554
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai |
| >cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.5e-14 Score=125.56 Aligned_cols=114 Identities=26% Similarity=0.318 Sum_probs=90.3
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.+ +.||+|||+|.|.+..+....|.|.|
T Consensus 1 g~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v 69 (118)
T cd08681 1 GTLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAV 69 (118)
T ss_pred CEEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence 469999999999963 23456789999999864 4678888755 68999999999999776667899999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCC---ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||++..+ +++||++.+++..+..| -.+.+|.+ .|+ ..+.|.++++|
T Consensus 70 ~d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~-~~~--~~G~i~l~l~f 118 (118)
T cd08681 70 FDDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTL-KGR--YAGEVYLELTF 118 (118)
T ss_pred EeCCCCC-CcceEEEEEecHHHhhcCCCCCcEEecc-CCc--EeeEEEEEEEC
Confidence 9998765 89999999999987554 35667765 343 34588888876
|
Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr |
| >cd08375 C2_Intersectin C2 domain present in Intersectin | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-13 Score=126.81 Aligned_cols=113 Identities=25% Similarity=0.404 Sum_probs=89.6
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||+++.++.||.|||+|.|.+..+....|.|.||
T Consensus 15 G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V~ 83 (136)
T cd08375 15 GRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITVF 83 (136)
T ss_pred EEEEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEEE
Confidence 689999999999863 23456789999999842 5689999999999999999999997766778999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCC------C--ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQ------G--IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~------G--yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|+|..+++++||++.+++..+.. + ++.++|. +. ..+.+.+.+.|
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~---~~--~~g~i~l~~~~ 135 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILKETKESKGPITKRLLLH---EV--PTGEVVVKLDL 135 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhccccccCCCcEEEEeccc---cc--cceeEEEEEEe
Confidence 99988889999999999998864 1 2445553 22 22356666655
|
A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro |
| >cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.7e-14 Score=125.25 Aligned_cols=116 Identities=24% Similarity=0.318 Sum_probs=91.6
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|++|++|+. ..+.+||||++.+.+ ...++||+++.++.||+|||+|.|.+.. +...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEEEC
Confidence 5799999999863 345789999999852 1346799999999999999999999853 345689999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCC-cccCeEEEEEEEEC
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGE-RYKSVKLLMHFEFI 561 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~-~~~~atLlv~~~f~ 561 (561)
+..+++++||++.++++.+..+. .+.||....++ .-..++|.+++.|+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~ 120 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM 120 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence 98888999999999999987543 45677755432 22356999999885
|
The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a |
| >cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=123.80 Aligned_cols=96 Identities=24% Similarity=0.374 Sum_probs=79.4
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-C--CceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--ELALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-p--ela~L 506 (561)
..+.|.|+|++|++|+.. +..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. . ....|
T Consensus 14 ~~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l 87 (125)
T cd04031 14 VTSQLIVTVLQARDLPPR------DDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTL 87 (125)
T ss_pred CCCEEEEEEEEecCCCCc------CCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEE
Confidence 456899999999999642 33466899999999765445567899999999999999999998643 2 23679
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSE 531 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~ 531 (561)
+|.|||.+..+++++||++.++|+.
T Consensus 88 ~~~V~d~~~~~~~~~iG~~~i~l~~ 112 (125)
T cd04031 88 EVTVWDYDRDGENDFLGEVVIDLAD 112 (125)
T ss_pred EEEEEeCCCCCCCcEeeEEEEeccc
Confidence 9999999988889999999999997
|
RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as |
| >cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8 | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=123.97 Aligned_cols=99 Identities=21% Similarity=0.310 Sum_probs=81.0
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~Lr 507 (561)
..+.|+|+|++|.+|+. .+..+.+||||+|.+. +....++||++++++.||+|||+|.|.+...+ ...|+
T Consensus 14 ~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~ 85 (124)
T cd08387 14 DMGILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLE 85 (124)
T ss_pred CCCEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEE
Confidence 34689999999999963 1334568999999994 33345679999999999999999999986543 34799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|.|||++..+++++||++.++|+.+..|-
T Consensus 86 i~V~d~~~~~~~~~iG~~~i~l~~~~~~~ 114 (124)
T cd08387 86 VLLYDFDQFSRDECIGVVELPLAEVDLSE 114 (124)
T ss_pred EEEEECCCCCCCceeEEEEEecccccCCC
Confidence 99999998888999999999999997553
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv |
| >cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.2e-14 Score=130.02 Aligned_cols=114 Identities=18% Similarity=0.191 Sum_probs=88.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~Lr 507 (561)
..++|+|+|++|++|+. .+..+.+||||+|.+........+.||++++++.||.|||+|.|.+...+ ...|+
T Consensus 13 ~~~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~ 86 (136)
T cd08405 13 TANRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLI 86 (136)
T ss_pred CCCeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 34689999999999963 23356789999999864333334678999999999999999999976433 35799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceE-EEccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~-ipL~d~~G~~~ 549 (561)
|.|||.+..+++++||++.+++.....+..+ ..|....|+++
T Consensus 87 ~~v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 87 ITVMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEEEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 9999999888899999999999987555544 36666666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves |
| >cd08373 C2A_Ferlin C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.8e-13 Score=123.51 Aligned_cols=110 Identities=26% Similarity=0.373 Sum_probs=91.9
Q ss_pred EEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCC
Q 008582 438 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDM 515 (561)
Q Consensus 438 Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~ 515 (561)
|++|++|+. ..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888853 245679999999864 467999999999999999999998653 45689999999998
Q ss_pred CCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 516 SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 516 ~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.+++++||++.++|+.+..+. .++||.+.+|.++. +.|.+.+.|.
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~~ 116 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSYQ 116 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEEe
Confidence 888999999999999988665 47899999888765 5888888873
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08680 C2_Kibra C2 domain found in Human protein Kibra | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.5e-14 Score=125.24 Aligned_cols=99 Identities=20% Similarity=0.327 Sum_probs=81.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC-ceeeecccCCCCCCCccccEEEEeeecCCc--eE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--AL 505 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d-~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~ 505 (561)
+..+.|.|+|+.|.+|+.. +..+.+||||+|.+...+.. ..++||++++++.||+|||+|.|.+...++ ..
T Consensus 11 ~~~~~L~V~V~~arnL~~~------~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~ 84 (124)
T cd08680 11 SGDSSLVISVEQLRNLSAL------SIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKT 84 (124)
T ss_pred CCCCEEEEEEeEecCCccc------ccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCE
Confidence 3456899999999999642 23356799999999654332 357899999999999999999999876555 58
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
|+|.|||.+..+++++||++.++|+.+.
T Consensus 85 L~~~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 85 LQVDVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEEEEeCCCCCceeEEEEEEEEhhhcc
Confidence 9999999998888999999999999884
|
Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom |
| >cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-13 Score=120.55 Aligned_cols=96 Identities=27% Similarity=0.369 Sum_probs=80.9
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|++|++|+.. +..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++...|.|.|+|.
T Consensus 2 L~V~v~~A~~L~~~------~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPLA------KSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCCc------ccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 78999999999742 3346789999999975 577899999999999999999999887788899999998
Q ss_pred CCCCCCcceEEEEEeCcccCCC-----ceEEEccC
Q 008582 514 DMSEKDDFGGQTCLPVSELKQG-----IRAVPLHD 543 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~G-----yR~ipL~d 543 (561)
+. +++||++.++|..|..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999988643 25667764
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm |
| >cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11 | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=124.24 Aligned_cols=97 Identities=22% Similarity=0.268 Sum_probs=77.5
Q ss_pred CceEEEEEEEecCCCCCCCCCccCC-CCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCC--ceEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALL 506 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~-~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pe--la~L 506 (561)
..+|+|+|++|.+|+.. +. .+.+||||+|.+.. ....++||++++++.||+|||+|.|. +...+ ...|
T Consensus 15 ~~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L 86 (128)
T cd08388 15 KKALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSL 86 (128)
T ss_pred CCEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEE
Confidence 46899999999999742 22 25679999999853 34456799999999999999999994 43222 2369
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
+|.|||+|..+++++||++.+||+.+..+
T Consensus 87 ~~~V~d~d~~~~d~~lG~~~i~L~~l~~~ 115 (128)
T cd08388 87 HFAVLSFDRYSRDDVIGEVVCPLAGADLL 115 (128)
T ss_pred EEEEEEcCCCCCCceeEEEEEeccccCCC
Confidence 99999999888899999999999998433
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence |
| >cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-13 Score=121.33 Aligned_cols=100 Identities=18% Similarity=0.269 Sum_probs=81.1
Q ss_pred CCceEEEEEEEecCCCCCCCCCccC-CCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~-~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~L 506 (561)
..+.|.|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...+ ...|
T Consensus 12 ~~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l 85 (123)
T cd08521 12 KTGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTL 85 (123)
T ss_pred CCCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEE
Confidence 346899999999999642 2 235689999999864333335789999999999999999999986544 3579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
.|.|||.+..+++++||++.++|+.+..|
T Consensus 86 ~i~v~d~~~~~~~~~iG~~~i~l~~l~~~ 114 (123)
T cd08521 86 QLSVWHHDRFGRNTFLGEVEIPLDSWDLD 114 (123)
T ss_pred EEEEEeCCCCcCCceeeEEEEeccccccc
Confidence 99999999888899999999999998654
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into |
| >cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-13 Score=122.03 Aligned_cols=99 Identities=25% Similarity=0.315 Sum_probs=82.3
Q ss_pred EEEEEEEecCCCCCCCCCccC-CCCCCCceeEEEEeccCCCceeeecccCCCCCCCcc-ccEEEEeeecCCc--eEEEEE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL--ALLRIE 509 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~-~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~W-NE~f~F~v~~pel--a~Lrf~ 509 (561)
|+|+|++|++|+.. + ..+.+||||+|.+.+ .++||+++.++.||.| ||+|.|.+..+++ ..|.|.
T Consensus 1 l~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPVM------DRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCcc------ccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 68999999999642 2 235679999999853 6789999999999999 9999999876554 579999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCC---Cc---eEEEccC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHD 543 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~---Gy---R~ipL~d 543 (561)
|||.+..+++++||++.+++..|.. +. +|.+|+|
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~ 109 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD 109 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence 9999988889999999999999865 33 4778876
|
The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a |
| >cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-13 Score=122.37 Aligned_cols=100 Identities=27% Similarity=0.390 Sum_probs=82.5
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|+++.++.||+|||+|.|.+..+....|.|.|||
T Consensus 1 ~L~v~vi~a~~L~~~------d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d 69 (123)
T cd04025 1 RLRCHVLEARDLAPK------DRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWD 69 (123)
T ss_pred CEEEEEEEeeCCCCC------CCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEE
Confidence 489999999998631 2345679999999853 46789999999999999999999877666789999999
Q ss_pred cCCCCCCcceEEEEEeCcccCCC---ceEEEccC
Q 008582 513 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHD 543 (561)
Q Consensus 513 ~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d 543 (561)
++..+++++||++.++|..+..+ ..|..|..
T Consensus 70 ~~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~ 103 (123)
T cd04025 70 WDLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLP 103 (123)
T ss_pred CCCCCCCcEeEEEEEEHHHcccCCCCCCEEECCC
Confidence 99888899999999999998654 34566664
|
RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a |
| >cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-13 Score=120.65 Aligned_cols=111 Identities=29% Similarity=0.464 Sum_probs=90.0
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|++|+.. +..+.+||||+|.+.+ ...++|+++.++.||.|||+|.|.+.......|.|.|||.
T Consensus 1 l~v~vi~a~~L~~~------~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPSA------DRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCCC------CCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 57999999998642 2345679999999865 2346899999999999999999998765557899999999
Q ss_pred CCCCCCcceEEEEEeCcccCCC---ceEEEccCCCCCcccCeEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLM 556 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d~~G~~~~~atLlv 556 (561)
+..+++++||++.+++..+..| .++++|....|.. .++||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999888 6788998766643 345664
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd04018 C2C_Ferlin C2 domain third repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-13 Score=127.88 Aligned_cols=107 Identities=24% Similarity=0.374 Sum_probs=82.7
Q ss_pred eEEEEEEEecCCCCCCCCC--------ccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-
Q 008582 433 TLKVTVYMGEGWYYDFPHT--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL- 503 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~--------~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel- 503 (561)
+|.|+|+.|++|+...... -.+..+.+||||+|.+.| .+.||++++++.||+|||+|.|.+..+..
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 4789999999998521000 011234679999999876 45689999999999999999999876654
Q ss_pred eEEEEEEEecCCCCCCcceEEEEEeCcccCC-C---c------eEEEccCC
Q 008582 504 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-G---I------RAVPLHDR 544 (561)
Q Consensus 504 a~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~-G---y------R~ipL~d~ 544 (561)
..|.|.|||+|..++|++||++.++|..+.. | | +|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999997642 2 1 66666643
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-13 Score=122.02 Aligned_cols=100 Identities=28% Similarity=0.368 Sum_probs=81.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
....|+|+|++|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~ 87 (127)
T cd04030 14 QRQKLIVTVHKCRNLPPC------DSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLD 87 (127)
T ss_pred CCCEEEEEEEEEECCCCc------cCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEE
Confidence 346899999999999642 33467899999999765444567899999999999999999999865433 5799
Q ss_pred EEEEecCCC--CCCcceEEEEEeCcccCCC
Q 008582 508 IEVHEYDMS--EKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 508 f~V~D~d~~--~~dd~iGq~~lpL~~L~~G 535 (561)
|.|||.+.. +++++||++.++|..|..+
T Consensus 88 i~v~~~~~~~~~~~~~iG~~~i~l~~l~~~ 117 (127)
T cd04030 88 VAVKNSKSFLSREKKLLGQVLIDLSDLDLS 117 (127)
T ss_pred EEEEECCcccCCCCceEEEEEEeccccccc
Confidence 999998864 5799999999999998554
|
KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1 |
| >cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15 | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-13 Score=125.05 Aligned_cols=103 Identities=23% Similarity=0.271 Sum_probs=81.8
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
...+|.|+|+.|++|+.. + .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~~L~V~V~~a~nL~~~------~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~ 85 (137)
T cd08409 13 TLNRLTVVVLRARGLRQL------D-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLS 85 (137)
T ss_pred CCCeEEEEEEEecCCCcc------c-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEE
Confidence 456899999999999632 3 456899999999764333346799999999999999999999864433 6799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCC--ceEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQG--IRAV 539 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~G--yR~i 539 (561)
|.|+|.+..+++++||++.++......| ..|+
T Consensus 86 ~~V~~~~~~~~~~~lG~v~ig~~~~~~~~~~~hW 119 (137)
T cd08409 86 LSVMQSGGVRKSKLLGRVVLGPFMYARGKELEHW 119 (137)
T ss_pred EEEEeCCCCCCcceEEEEEECCcccCCChHHHHH
Confidence 9999999888899999999997655444 5554
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id |
| >cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.5e-13 Score=123.03 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=79.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~V 510 (561)
..|.|+|+.|.+|+.. + .+.+||||+|.+...+....++||+++.++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~~------~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRST------N-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCCC------C-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 5799999999998632 2 356799999999865555567899999999999999999999865433 3688999
Q ss_pred EecCCCC-CCcceEEEEEeCcccCCC
Q 008582 511 HEYDMSE-KDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 511 ~D~d~~~-~dd~iGq~~lpL~~L~~G 535 (561)
||.+... ++++||.+.+||..+..|
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~ 110 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQ 110 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccC
Confidence 9988654 478999999999998655
|
This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho |
| >cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.2e-13 Score=118.39 Aligned_cols=118 Identities=25% Similarity=0.328 Sum_probs=90.1
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+...........+.+||||+|.+.+ ...+|+++.++.||.|||+|.|.+..+....|.|.||
T Consensus 1 g~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~ 75 (121)
T cd08391 1 GVLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELF 75 (121)
T ss_pred CeEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEE
Confidence 35899999999996421000000124679999999864 5789999999999999999999987655678999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC-c--eEEEccCCCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG-I--RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G-y--R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|++.. ++++||++.+++..+..+ . .+.+|.+. ..+.|.++++|
T Consensus 76 d~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 76 DEDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred ecCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 99877 799999999999987644 2 57788764 33578888876
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular |
| >cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-13 Score=123.03 Aligned_cols=97 Identities=26% Similarity=0.448 Sum_probs=79.7
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC--CceeeecccCCCCCCCccccEEEEeeecC----Cce
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSVP----ELA 504 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~--d~~k~kTkvi~nn~nP~WNE~f~F~v~~p----ela 504 (561)
...|+|+|++|++|+.. +..+.+||||+|.+.+... ...++||+++++++||+|||+|.|.+... ...
T Consensus 15 ~~~L~V~Vi~A~~L~~~------~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~ 88 (133)
T cd04009 15 EQSLRVEILNARNLLPL------DSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGA 88 (133)
T ss_pred CCEEEEEEEEeeCCCCc------CCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCC
Confidence 35799999999999642 3345689999999975332 24578999999999999999999998642 245
Q ss_pred EEEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 505 LLRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 505 ~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
.|.|.|||++..+++++||++.++|+.|.
T Consensus 89 ~l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 89 LLLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 79999999998888999999999999886
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s |
| >cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.6e-13 Score=121.13 Aligned_cols=114 Identities=20% Similarity=0.358 Sum_probs=89.5
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
.|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||.|||+|.|.+.. ...|.|.|||
T Consensus 1 ~l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d 68 (123)
T cd08382 1 KVRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFD 68 (123)
T ss_pred CeEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEE
Confidence 37899999999863 23456789999999864 356789999999999999999999854 5679999999
Q ss_pred cCCCCC--CcceEEEEEeCcccC-C---CceEEEccCCCCCc--ccCeEEEEEE
Q 008582 513 YDMSEK--DDFGGQTCLPVSELK-Q---GIRAVPLHDRKGER--YKSVKLLMHF 558 (561)
Q Consensus 513 ~d~~~~--dd~iGq~~lpL~~L~-~---GyR~ipL~d~~G~~--~~~atLlv~~ 558 (561)
++..++ +++||++.+++..|. . +..|.+|++..... ...++|.+++
T Consensus 69 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 69 QKKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 987654 579999999999974 2 36789997766432 2245787775
|
A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are |
| >cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.4e-13 Score=120.03 Aligned_cols=120 Identities=21% Similarity=0.298 Sum_probs=93.3
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+.. .....+.+||||+|.+.+ .+.+|++++++.||.|||+|.|.+..+....|.|.||
T Consensus 1 g~l~v~v~~a~~L~~~----~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v~ 71 (128)
T cd04024 1 GVLRVHVVEAKDLAAK----DRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLILW 71 (128)
T ss_pred CEEEEEEEEeeCCCcc----cCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEEE
Confidence 3689999999999632 111146689999998743 5679999999999999999999997655678999999
Q ss_pred ecCCCCCCcceEEEEEeCcccC----CC--ceEEEccCCCCC--cccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELK----QG--IRAVPLHDRKGE--RYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~----~G--yR~ipL~d~~G~--~~~~atLlv~~~f 560 (561)
|++..+++++||++.++|..+. .| -.+.+|.+.... ....++|.++|.|
T Consensus 72 d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 72 DKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred ECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 9998778999999999999885 23 356788766322 2345689988875
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu |
| >cd04011 C2B_Ferlin C2 domain second repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.4e-13 Score=119.87 Aligned_cols=99 Identities=20% Similarity=0.175 Sum_probs=82.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC----ceEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----LALL 506 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe----la~L 506 (561)
...|+|+|+.|++|+ .+.+||||+|.+.+ .++||++++++.||.|||+|.|.+..+. ...|
T Consensus 3 ~~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l 67 (111)
T cd04011 3 DFQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKII 67 (111)
T ss_pred cEEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeE
Confidence 357999999999985 24579999999974 4678999999999999999999976543 2579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc------eEEEccCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI------RAVPLHDR 544 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy------R~ipL~d~ 544 (561)
.|.|+|.+..+++++||++.++|+.+..+. +|++|.|+
T Consensus 68 ~i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 68 KISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 999999998888999999999999996663 46777663
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme |
| >cd04032 C2_Perforin C2 domain of Perforin | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.7e-13 Score=122.74 Aligned_cols=93 Identities=29% Similarity=0.375 Sum_probs=78.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ecCCceEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPELALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~pela~Lrf~ 509 (561)
.++|+|+|++|++|+. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.. ..+....|+|.
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 3689999999999963 2346679999999864 378999999999999999999974 34456789999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|||++..+++++||++.++|...-.+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999888899999999999866544
|
Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few |
| >cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group | Back alignment and domain information |
|---|
Probab=99.47 E-value=9e-13 Score=118.57 Aligned_cols=113 Identities=22% Similarity=0.364 Sum_probs=87.1
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
.|+|+|++|++|+.. +..+.+||||+|.+.+. .....||+++.++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~~------~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKAD------SSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCCC------CCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 589999999999642 33467899999986532 1345799999999999999999999876555789999999
Q ss_pred cCCCCCCcceEEEEEeCcccCC---Cc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 513 YDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 513 ~d~~~~dd~iGq~~lpL~~L~~---Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
.+..+++++||++.++|..+.. |. ++++|.. +| .+.+++.+
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-~g------~i~l~~~~ 120 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-QG------RLLLRVSM 120 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-CC------eEEEEEEE
Confidence 9988789999999999987532 32 4667753 33 56666654
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap |
| >cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-13 Score=124.31 Aligned_cols=114 Identities=18% Similarity=0.250 Sum_probs=87.2
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC-CceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~-d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
..++|.|+|+.|.+|+. .+..+.+||||+|.+..... ...++||++++++.||+|||+|.|.+...++ ..|
T Consensus 13 ~~~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L 86 (138)
T cd08408 13 LTGRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTL 86 (138)
T ss_pred CCCeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEE
Confidence 45689999999999964 23345689999999964222 1246799999999999999999999875444 589
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCC-CceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQ-GIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~-GyR~i-pL~d~~G~~~ 549 (561)
.|.|+|.+..+++++||++.+++..... +..|+ .|++..++++
T Consensus 87 ~~~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~v 131 (138)
T cd08408 87 MFSVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQV 131 (138)
T ss_pred EEEEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCEE
Confidence 9999999988899999999999987754 33333 5555555543
|
Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle |
| >cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.7e-13 Score=119.23 Aligned_cols=99 Identities=21% Similarity=0.286 Sum_probs=79.5
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec---CCceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~L 506 (561)
....|+|+|++|++|+.. +..+..||||+|.+.. .+..+.||++++++.||+|||+|.|.+.. .....|
T Consensus 14 ~~~~L~v~v~~a~~L~~~------d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l 85 (125)
T cd08386 14 QESTLTLKILKAVELPAK------DFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVL 85 (125)
T ss_pred CCCEEEEEEEEecCCCCc------cCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEE
Confidence 346899999999999632 3345679999999853 33456799999999999999999997532 223579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
.|.|||+|..+++++||++.++|+.+..|-
T Consensus 86 ~~~v~d~d~~~~~~~iG~~~i~l~~l~~~~ 115 (125)
T cd08386 86 YLQVLDYDRFSRNDPIGEVSLPLNKVDLTE 115 (125)
T ss_pred EEEEEeCCCCcCCcEeeEEEEecccccCCC
Confidence 999999998888999999999999987663
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves |
| >KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-13 Score=127.88 Aligned_cols=92 Identities=28% Similarity=0.454 Sum_probs=79.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|+.|.+|.. .|..+.+||||.+.+.+ ++.||+++.+|.||+|||.|+|.+..+. ..|.+.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~~-~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDPN-TPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCCC-ceEEEEEE
Confidence 579999999999853 23336789999999875 6889999999999999999999998774 46899999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|+|..+.||++|.+.|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999987654
|
|
| >cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
Probab=99.46 E-value=7e-13 Score=119.53 Aligned_cols=97 Identities=22% Similarity=0.271 Sum_probs=78.3
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCC--ceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pe--la~L 506 (561)
...+|.|+|+.|++|+.. +..+..||||++.+.+ ....++||+++++ .||+|||+|.|. +...+ ...|
T Consensus 14 ~~~~L~V~Vi~a~nL~~~------~~~~~~d~yVk~~llp--~~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L 84 (124)
T cd08389 14 SARKLTVTVIRAQDIPTK------DRGGASSWQVHLVLLP--SKKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMAL 84 (124)
T ss_pred CCCEEEEEEEEecCCCch------hcCCCCCcEEEEEEcc--CCcceeecccccC-CCCcccCEEEECCCCHHHhccCEE
Confidence 446899999999999642 2245579999987754 3346789999887 999999999998 54332 3579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
+|.|+|++..+++++||++.+||+.+..+
T Consensus 85 ~~~V~~~~~~~~~~~lG~~~i~L~~l~~~ 113 (124)
T cd08389 85 RFRLYGVERMRKERLIGEKVVPLSQLNLE 113 (124)
T ss_pred EEEEEECCCcccCceEEEEEEeccccCCC
Confidence 99999999888899999999999998765
|
Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle |
| >cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3 | Back alignment and domain information |
|---|
Probab=99.46 E-value=1e-12 Score=118.01 Aligned_cols=115 Identities=19% Similarity=0.278 Sum_probs=87.7
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|+.|.+|+... ...+..||||+|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~~-----~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPRS-----GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCCC-----CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 789999999996420 1124679999999843 2357899999999999999999998643 35799999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCc---eEEEccC--CCCCcccCeEEEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHD--RKGERYKSVKLLMHFEF 560 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d--~~G~~~~~atLlv~~~f 560 (561)
+..+++++||.+.++++.+..|. .|.+|.- ..++ ..+.|++.+.|
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~--~~G~i~l~~~~ 121 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSE--VQGKVHLELRL 121 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCc--ccEEEEEEEEC
Confidence 98888999999999999987543 4667753 3333 35677776654
|
RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p |
| >PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.2e-14 Score=117.37 Aligned_cols=76 Identities=32% Similarity=0.552 Sum_probs=65.8
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCCCCCCCC
Q 008582 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSP 103 (561)
Q Consensus 26 ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~ 103 (561)
||..||.+|+++ +.||.++|++||+++|++..++.++|.+||.+|++.. ....+..||++||++||+|++|.+++|
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~--~~~~~~~lt~~gF~~fL~S~~N~~~~~ 77 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDE--RNRQKGQLTLEGFTRFLFSDENSIFDP 77 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHH--HHHCTTEEEHHHHHHHHHSTTCBSS-H
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccch--hhcccCCcCHHHHHHHHCCCcCCCCCh
Confidence 799999999986 9999999999999999998889999999999998432 123457899999999999999999986
|
It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-13 Score=121.25 Aligned_cols=108 Identities=27% Similarity=0.326 Sum_probs=88.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCC----ceEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE----LALLR 507 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pe----la~Lr 507 (561)
+|+|+|++|++|+.. +..+.+||||+|.+.+ ..+++|+++.+ +.||.|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~~------~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKNV------NLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCCC------CcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 489999999999642 3346789999999975 24678998764 699999999999987664 57899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCce--------EEEccCCCCCccc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR--------AVPLHDRKGERYK 550 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR--------~ipL~d~~G~~~~ 550 (561)
|.|||.+..+++++||++.+||..+..+.+ +.+|.+++|++-+
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~G 121 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQG 121 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcCe
Confidence 999999876789999999999999876553 4688888888653
|
SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such |
| >cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=118.21 Aligned_cols=114 Identities=29% Similarity=0.418 Sum_probs=89.1
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~~------d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIAK------DKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcCC------CCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 689999999999642 3346689999999842 467999999999999999999988654 3468999999
Q ss_pred cCCC-----------CCCcceEEEEEeCcccCCCc-eEEEccCCCCCcccCeEEEEEE
Q 008582 513 YDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF 558 (561)
Q Consensus 513 ~d~~-----------~~dd~iGq~~lpL~~L~~Gy-R~ipL~d~~G~~~~~atLlv~~ 558 (561)
+|.. +.+++||++.+++..+..+. .|.+|....+.....+.|.++|
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 8842 46899999999999886555 4568876555544566787764
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev |
| >cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=117.39 Aligned_cols=119 Identities=22% Similarity=0.217 Sum_probs=92.3
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+... ...+.+||||+|.+.+. ....||+++.++.||.|||.|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~~~-----~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKGSD-----IIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCccc-----ccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 46899999999996310 11245799999999752 35679999999999999999999987 44567999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCceE---EEccCCCCCcccCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGIRA---VPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~GyR~---ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|.+..+++++||++.++|..+..+..+ .......|++. ++|.|.++|+
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~~--G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKPV--GELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCccc--eEEEEEEEeC
Confidence 998877899999999999998765432 23334566653 5899988885
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-13 Score=123.44 Aligned_cols=114 Identities=19% Similarity=0.186 Sum_probs=91.1
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~Lr 507 (561)
..+.|.|+|++|++|+.. +..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+
T Consensus 12 ~~~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~ 85 (134)
T cd00276 12 TAERLTVVVLKARNLPPS------DGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLV 85 (134)
T ss_pred CCCEEEEEEEEeeCCCCc------cCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEE
Confidence 346899999999999642 2345689999999976544445779999999999999999999987654 46799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCce-EEEccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR-~ipL~d~~G~~~ 549 (561)
|.|||.+..+++++||++.++++....+.. |.+|.+..|+++
T Consensus 86 ~~v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 86 ITVVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEEEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 999999877789999999999999444444 448887777764
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin |
| >cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-12 Score=119.18 Aligned_cols=115 Identities=23% Similarity=0.413 Sum_probs=88.2
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-C--------Cc
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--------EL 503 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-p--------el 503 (561)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||.|||+|.|.+.. + +.
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 58999999999963 23456789999999864 57799999999999999999997531 1 12
Q ss_pred eEEEEEEEecCCCCCCcceEEEEE-eCcccCC---C---ceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 504 ALLRIEVHEYDMSEKDDFGGQTCL-PVSELKQ---G---IRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 504 a~Lrf~V~D~d~~~~dd~iGq~~l-pL~~L~~---G---yR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
..|.|.|||+|..+++++||++.+ |+..++. + -+|.+|.. .|. ..+.|+|.|+++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~-~~~--~~Geil~~~~~~ 132 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYK-GGQ--SAGELLAAFELI 132 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeec-CCC--chhheeEEeEEE
Confidence 468999999998888999999986 6655542 2 26788863 343 345899999874
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme |
| >cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-12 Score=117.90 Aligned_cols=116 Identities=24% Similarity=0.209 Sum_probs=88.1
Q ss_pred ceEEEEEEEecCCCCCCCCCc--c--CCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTH--F--DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 507 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~--~--~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lr 507 (561)
+.|+|+|+.|++|........ + ...+.+||||+|.+.+ ....+|+++.++.||.|||+|.|.+. +...|.
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~ 77 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE 77 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence 579999999999963210000 0 0124679999999864 23468999988999999999999985 456799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCC-----CceEEEccCCCCCcccCeEEEEEEEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQ-----GIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~-----GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.|+|.+..+++++||++.++|+.+.. +-.+++|. + .+.|+|++.|
T Consensus 78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-~------~G~l~l~~~~ 128 (132)
T cd04014 78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-P------QGKLHVKIEL 128 (132)
T ss_pred EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-C------CcEEEEEEEE
Confidence 999998877789999999999998876 24677885 2 3478888776
|
A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that |
| >cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-12 Score=116.59 Aligned_cols=114 Identities=18% Similarity=0.236 Sum_probs=86.5
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|+.|++|+.. +..+..||||+|.+.+ ....||+++.++.||.|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~~------d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPAK------DITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcCC------CCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 78999999998642 3346689999999854 2346999999999999999999997533 36799999999
Q ss_pred CCCCCCcceEEEEEeCcccCCC----ceEEEccCCCCCcccCeEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGERYKSVKLLMHF 558 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~G----yR~ipL~d~~G~~~~~atLlv~~ 558 (561)
+..+++++||++.+++..+..+ ..|++|....+..-..+.|++.+
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~ 119 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLEL 119 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEE
Confidence 9888899999999999877643 35788864322211234666654
|
Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. |
| >cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4 | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.5e-13 Score=124.24 Aligned_cols=98 Identities=21% Similarity=0.249 Sum_probs=79.9
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC-Cc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-EL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p-el--a~L 506 (561)
..+.|.|+|++|.+|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|
T Consensus 25 ~~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L 98 (162)
T cd04020 25 STGELHVWVKEAKNLPAL------KSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACL 98 (162)
T ss_pred CCceEEEEEEeeeCCCCC------CCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEE
Confidence 457899999999999742 234678999999986544445678999999999999999999985422 22 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
.|.|||++..+++++||++.+++..+.
T Consensus 99 ~i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 99 ELTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEEeCCCCCCCceEEEEEEeCCccc
Confidence 999999998888999999999999874
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin |
| >cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17 | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-12 Score=117.57 Aligned_cols=104 Identities=19% Similarity=0.231 Sum_probs=82.8
Q ss_pred CCceEEEEEEEecCCCCCCCCCccC-CCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~-~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
..+.|.|+|++|++|+.. + ..+.+||||+|.+.. .+...++|++++++.||+|||+|.|.+...++ ..|
T Consensus 12 ~~~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l 83 (123)
T cd08390 12 EEEQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTL 83 (123)
T ss_pred CCCEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEE
Confidence 346899999999999642 2 245679999999853 33456789999999999999999999865433 469
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 541 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL 541 (561)
+|.|||.+..+++++||++.++|+.+..+. .|.+|
T Consensus 84 ~i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L 121 (123)
T cd08390 84 RLSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDL 121 (123)
T ss_pred EEEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeC
Confidence 999999998778999999999999987554 44555
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat |
| >cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.7e-12 Score=117.71 Aligned_cols=108 Identities=29% Similarity=0.392 Sum_probs=87.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC-ceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-LALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe-la~Lrf~V 510 (561)
..|+|+|++|++|+.. +..+..||||+|.+.+.+.+..++||+++.++.||.|||+|.|.+...+ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 5799999999999642 2235679999999987666667889999999999999999999986543 35799999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCC--ceEEEccCCC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRK 545 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~G--yR~ipL~d~~ 545 (561)
||.+..+++++||++.++|+.+..+ -.|.+|.+.+
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9998877899999999999988643 3567887643
|
A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd |
| >cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1) | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.8e-12 Score=118.22 Aligned_cols=121 Identities=21% Similarity=0.209 Sum_probs=87.7
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--------ceE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--------LAL 505 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--------la~ 505 (561)
..++|..+.+++++. ....+..||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~~----~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLPS----GWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccCC----CcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 345566666543221 12234579999999853334556889999999999999999999985432 135
Q ss_pred EEEEEEecCCC-CCCcceEEEEEeCcccCCC--c-eEEEccCCCCCcccCeEEEEEEEE
Q 008582 506 LRIEVHEYDMS-EKDDFGGQTCLPVSELKQG--I-RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 506 Lrf~V~D~d~~-~~dd~iGq~~lpL~~L~~G--y-R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.|.|||++.. .+|++||++.++|+.|..+ . .+++|++ |...-|+.|-|++..
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~ 136 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL 136 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence 89999999864 4699999999999999443 3 3668886 555667799988753
|
Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha |
| >cd04046 C2_Calpain C2 domain present in Calpain proteins | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.6e-12 Score=113.35 Aligned_cols=114 Identities=21% Similarity=0.270 Sum_probs=88.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
..|+|+|++|++|.. .+..+.+||||+|.+.+ .+.||++++++.||.|||.|.|.+..+ ...|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 468999999999853 23456789999998764 467999999999999999999987654 457999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC-ceEEEccC----CCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG-IRAVPLHD----RKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G-yR~ipL~d----~~G~~~~~atLlv~~~f 560 (561)
|++... +++||.+.++++.+..+ +++++|.. .+|+.. ++|.+++.+
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~--G~i~~~~~~ 121 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEVP--GTISVKVTS 121 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCCC--CEEEEEEEE
Confidence 998764 89999999999876544 57888852 344432 467776654
|
A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic |
| >cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-12 Score=116.45 Aligned_cols=100 Identities=25% Similarity=0.344 Sum_probs=80.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~pel--a~L 506 (561)
....|+|+|++|++|+.. +..+.+||||+|.+.+...+..+.||++++++.||.|||+|.|.. ...++ ..|
T Consensus 13 ~~~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l 86 (123)
T cd04035 13 ANSALHCTIIRAKGLKAM------DANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTL 86 (123)
T ss_pred CCCEEEEEEEEeeCCCCC------CCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEE
Confidence 346899999999999632 334568999999997655455678999999999999999999963 33222 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
.|.|||.+.. ++++||++.++++.|..+-
T Consensus 87 ~~~v~d~~~~-~~~~iG~~~i~l~~l~~~~ 115 (123)
T cd04035 87 RLLVLDEDRF-GNDFLGETRIPLKKLKPNQ 115 (123)
T ss_pred EEEEEEcCCc-CCeeEEEEEEEcccCCCCc
Confidence 9999999877 7899999999999998763
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain |
| >cd04048 C2A_Copine C2 domain first repeat in Copine | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-12 Score=116.17 Aligned_cols=103 Identities=21% Similarity=0.247 Sum_probs=81.2
Q ss_pred EEEecCCCCCCCCCccCCCCCCCceeEEEEeccC--CCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCC
Q 008582 438 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 515 (561)
Q Consensus 438 Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p--~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~ 515 (561)
.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|||+|.|.+..++...|+|.|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 477888863 2345678999999998754 23346799999999999999999998776677789999999996
Q ss_pred ----CCCCcceEEEEEeCcccCCCc---eEEEccCCCC
Q 008582 516 ----SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 546 (561)
Q Consensus 516 ----~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G 546 (561)
.+++++||++.+++..|..+- ...+|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 678999999999999987542 3557754443
|
There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma |
| >cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-12 Score=116.08 Aligned_cols=91 Identities=20% Similarity=0.364 Sum_probs=76.9
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|.|++|++|+. .+..+.+||||+|.+.+. ..+.||++++++.||.|||+|.|.+..++...|.|.|||+
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999964 234567899999998642 2345788888999999999999998777778899999999
Q ss_pred CCCCCCcceEEEEEeCcccC
Q 008582 514 DMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~ 533 (561)
|..+++++||++.++|....
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999998765
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.1e-12 Score=118.53 Aligned_cols=92 Identities=29% Similarity=0.437 Sum_probs=78.0
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|.+|+.. +. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~~------d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAVR------DF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCCC------CC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 4699999999999632 22 5679999999853 578999999999999999999998766 567999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|++..+++++||++.+++..+..+-
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~~ 93 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEAA 93 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhhh
Confidence 9998888999999999999876543
|
ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i |
| >cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-12 Score=113.35 Aligned_cols=93 Identities=26% Similarity=0.350 Sum_probs=72.6
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|.+|++|. +.+||||++.+.+......+.||+++.++.||+|||+|.|.+.. ...|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 689999999983 23699999988653332457899999999999999999999863 34799999997
Q ss_pred -------CCCCCCcceEEEEEeCc--ccC-CCceEE
Q 008582 514 -------DMSEKDDFGGQTCLPVS--ELK-QGIRAV 539 (561)
Q Consensus 514 -------d~~~~dd~iGq~~lpL~--~L~-~GyR~i 539 (561)
|..+.|+++|.+.+.|+ .+. .|+...
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~~ 103 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQEK 103 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeEE
Confidence 45577999988887775 443 477543
|
The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr |
| >cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1) | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.6e-11 Score=112.66 Aligned_cols=94 Identities=21% Similarity=0.326 Sum_probs=75.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC--------CceeeecccCCCCCCCcc-ccEEEEeeecCCc
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--------DTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL 503 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~--------d~~k~kTkvi~nn~nP~W-NE~f~F~v~~pel 503 (561)
.++|++++|.+|+. +.++.+||||++.+.+... +..++||+++.++.||+| ||+|.|.+...
T Consensus 2 ~~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~-- 72 (137)
T cd08691 2 SFSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT-- 72 (137)
T ss_pred EEEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--
Confidence 36889999999952 2357899999999964322 234789999999999999 99999998543
Q ss_pred eEEEEEEEecCCCCC---CcceEEEEEeCcccCCC
Q 008582 504 ALLRIEVHEYDMSEK---DDFGGQTCLPVSELKQG 535 (561)
Q Consensus 504 a~Lrf~V~D~d~~~~---dd~iGq~~lpL~~L~~G 535 (561)
..|.|.|||++..++ +++||++.+||..|..|
T Consensus 73 ~~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~ 107 (137)
T cd08691 73 DVLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLER 107 (137)
T ss_pred CEEEEEEEecCCCCCccCCceEEEEEEEHHHhccc
Confidence 369999999865433 79999999999998755
|
NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C |
| >PLN03008 Phospholipase D delta | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.2e-12 Score=142.91 Aligned_cols=99 Identities=22% Similarity=0.448 Sum_probs=86.6
Q ss_pred CCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 457 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 457 ~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
..+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. +.|.|.|+|+|..+ +++||++.|||..|..|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4679999999943 23569999999999999999999988764 57999999999886 799999999999999996
Q ss_pred ---eEEEccCCCCCcccC-eEEEEEEEEC
Q 008582 537 ---RAVPLHDRKGERYKS-VKLLMHFEFI 561 (561)
Q Consensus 537 ---R~ipL~d~~G~~~~~-atLlv~~~f~ 561 (561)
++++|.+..|++..+ +.|.|+++|+
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~ 177 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFT 177 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence 688999999999955 7999999984
|
|
| >cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.9e-12 Score=114.06 Aligned_cols=104 Identities=29% Similarity=0.360 Sum_probs=83.8
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC------------
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP------------ 501 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p------------ 501 (561)
|+|+|+.|++|+.. ..+..||||+|.+.+ +....++||+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~~-------~~g~~dPyv~v~~~~-~~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLALK-------SNGTCDPFARVTLNY-SSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCcc-------cCCCCCcEEEEEEec-CCcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 57999999998631 235679999999975 2334678999999999999999999998654
Q ss_pred ---CceEEEEEEEecCCCCCCcceEEEEEeCcccCCC---ceEEEccCCC
Q 008582 502 ---ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK 545 (561)
Q Consensus 502 ---ela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d~~ 545 (561)
....|+|.|||.+..++++|||++.++|..+..+ ..|.+|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3457999999999877899999999999998654 4677887543
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin |
| >cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.3e-12 Score=112.09 Aligned_cols=92 Identities=25% Similarity=0.360 Sum_probs=75.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCC---ceEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE---LALLR 507 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pe---la~Lr 507 (561)
+.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||.|||+|.|.+..+. ...|.
T Consensus 1 g~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~ 69 (124)
T cd04049 1 GTLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLI 69 (124)
T ss_pred CeEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEE
Confidence 368999999999963 23346789999999853 4568888775 799999999999998763 46789
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCC
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQ 534 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~ 534 (561)
|.|||.+..+++++||++.++|..+..
T Consensus 70 v~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 70 LRIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEEECccCCCCCeEEEEEEEhHHhhh
Confidence 999999888889999999999998853
|
In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai |
| >cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-11 Score=111.75 Aligned_cols=94 Identities=21% Similarity=0.302 Sum_probs=75.1
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
..|.|+|+.|++++. + +..||||+|.+.+ .|.+|++++++ ||.|||+|.|.+..++.. |.|.||
T Consensus 2 ~~L~V~Vv~Ar~L~~----~-----~~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~ 65 (127)
T cd08394 2 SLLCVLVKKAKLDGA----P-----DKFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELW 65 (127)
T ss_pred ceEEEEEEEeeCCCC----C-----CCCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEE
Confidence 469999999999842 1 1248999999953 57789988774 999999999999765555 999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc-----eEEEcc
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI-----RAVPLH 542 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy-----R~ipL~ 542 (561)
|+|.. .||++|++.+||+.+..+- .|.+|.
T Consensus 66 dkd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 66 NKGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred eCCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 99865 7999999999999986442 356664
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi |
| >cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-11 Score=110.97 Aligned_cols=93 Identities=25% Similarity=0.410 Sum_probs=77.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ ..+.+|+++.++.||.|||+|.|.+..+. ..|+|.||
T Consensus 1 g~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~ 69 (120)
T cd04045 1 GVLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVM 69 (120)
T ss_pred CeEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEE
Confidence 368999999999864 23356789999999854 24678999999999999999999886553 57999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|++..+++++||++.++|..+..+
T Consensus 70 d~~~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 70 DYEKVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred ECCCCCCCCeeeEEEEeHHHhhCC
Confidence 999888899999999999988655
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-11 Score=112.91 Aligned_cols=115 Identities=17% Similarity=0.321 Sum_probs=92.8
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
...|+|.|+.|++|+.. .+|||+|.+.| ....||+++.++.||.|+|.|.|....+ ..-|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~~-----------~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPPK-----------KRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCCc-----------CCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 35799999999999631 27899999986 2345999999999999999999975433 45689999
Q ss_pred EecCC-C---CCCcceEEEEEeCcccCCCc---eEEEccCCCCCc--------ccCeEEEEEEEEC
Q 008582 511 HEYDM-S---EKDDFGGQTCLPVSELKQGI---RAVPLHDRKGER--------YKSVKLLMHFEFI 561 (561)
Q Consensus 511 ~D~d~-~---~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~--------~~~atLlv~~~f~ 561 (561)
+..+. . .++++||.+.||+..+..|. +|.||.+.+|.+ -+++.|-|+++|.
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf~ 139 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARYQ 139 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEEE
Confidence 65442 2 25789999999999999885 799999999986 5668999999883
|
SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas |
| >cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.7e-11 Score=105.16 Aligned_cols=113 Identities=21% Similarity=0.305 Sum_probs=83.8
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEEEEE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 511 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf~V~ 511 (561)
|+|+|+.|.+|+.. +.+||||+|.+.+ ...+||+++.+ .||.|||+|.|.+...++ ..|.|.|+
T Consensus 2 L~v~vi~a~~l~~~---------~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPSK---------GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCcC---------CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 78999999999631 4579999999964 23468999988 999999999999876543 45778888
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc-eEEEccCCCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy-R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.+...++.++|.+.+.......+. .|.+|....+.....+.|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8775555677777665555554444 467887766655556689888876
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 |
| >cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.8e-11 Score=107.68 Aligned_cols=114 Identities=23% Similarity=0.315 Sum_probs=84.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
..|.|+|++|+.+.. +..+.+||||+|.+.+. .+.+|+++.++.||.|||+|.|.+. +...|.|.||
T Consensus 2 ~~L~V~i~~a~l~~~-------~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~ 68 (125)
T cd04021 2 SQLQITVESAKLKSN-------SKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVW 68 (125)
T ss_pred ceEEEEEEeeECCCC-------CcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEE
Confidence 469999999983321 22456899999998642 3678999999999999999999974 3467999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC-------ce-EEEccCCC-CCcccCeEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG-------IR-AVPLHDRK-GERYKSVKLLMHF 558 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G-------yR-~ipL~d~~-G~~~~~atLlv~~ 558 (561)
|++..+.+++||++.++|..+..+ ++ +++|..++ +.-...+.|.+.+
T Consensus 69 d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 124 (125)
T cd04021 69 SHHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL 124 (125)
T ss_pred eCCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence 999888899999999999987642 22 56776443 1112234676655
|
E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.7e-12 Score=131.93 Aligned_cols=96 Identities=30% Similarity=0.494 Sum_probs=83.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~V 510 (561)
..|+|+|..|.+|.. .+..+.+||||++.+...+....|+||++++.++||+|||+|.|.+...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 468899999988853 355677899999999988888889999999999999999999999875543 5789999
Q ss_pred EecCCCCCCcceEEEEEeCcccC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
||+|..+++||+|...+.+++|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999998875
|
|
| >PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.4e-11 Score=100.17 Aligned_cols=85 Identities=38% Similarity=0.550 Sum_probs=73.0
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|++|+.. +..+.+||||+|.+.+.+. .+.+|+++.++.+|.|||+|.|.+..++...|.|.|||.
T Consensus 1 L~v~I~~a~~L~~~------~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPSK------DSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSSS------STTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCCc------ccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 78999999999742 2344679999999987544 568999999999999999999998888888899999999
Q ss_pred CCCCCCcceEEEE
Q 008582 514 DMSEKDDFGGQTC 526 (561)
Q Consensus 514 d~~~~dd~iGq~~ 526 (561)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999974
|
C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A .... |
| >cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.8e-11 Score=112.14 Aligned_cols=94 Identities=29% Similarity=0.424 Sum_probs=75.5
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC------------------------ceeeecccCCCC
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD------------------------TVMKKTKTLEDN 485 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d------------------------~~k~kTkvi~nn 485 (561)
....|+|+|++|++|+. .+..+.+||||+|.+.+.... ...++|+++.++
T Consensus 26 ~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~t 99 (153)
T cd08676 26 PIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQT 99 (153)
T ss_pred CeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCC
Confidence 34689999999999863 234567899999988532110 123689999999
Q ss_pred CCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 486 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 486 ~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
.||.|||+|.|.+..+....|.|.|||++ +++||++.++++.+.
T Consensus 100 lnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~ 143 (153)
T cd08676 100 LNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLP 143 (153)
T ss_pred CCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhC
Confidence 99999999999987655578999999987 889999999999987
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy |
| >cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.8e-11 Score=105.99 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=78.8
Q ss_pred CCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 454 ~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
...+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+..+....|.|.|+|.+.. ++++||.+.+||+.+.
T Consensus 8 ~~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~ 82 (111)
T cd04052 8 SKTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLI 82 (111)
T ss_pred ccCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHH
Confidence 3456789999999954 2456899988899999999999998765556799999999987 7999999999999873
Q ss_pred -C---CceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 534 -Q---GIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 534 -~---GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
. +.+|.+|.+ ...++|.++++|.
T Consensus 83 ~~~~~~~~w~~L~~-----~~~G~i~~~~~~~ 109 (111)
T cd04052 83 DATSVGQQWFPLSG-----NGQGRIRISALWK 109 (111)
T ss_pred hhhhccceeEECCC-----CCCCEEEEEEEEe
Confidence 2 356888865 2357898888873
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.4e-11 Score=114.01 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=83.8
Q ss_pred ccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc------ccchHHHHHHHHhhhccccC
Q 008582 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------APVELIKCLRSIKEYAFVAS 195 (561)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt------s~i~f~dvi~aI~~~AF~~S 195 (561)
.+|+-|....+ +.|..+|..||..|||.||+|||...| ++|||.|+.++. .-.+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888766554 888999999999999999999998766 479999999986 56889999999999999 88
Q ss_pred CCceEEEeccCCCH----HHHHHHHHHHHHHhh
Q 008582 196 EYPVVITLEDHLTP----DLQAKVAEMVTQTLG 224 (561)
Q Consensus 196 ~yPvIlSlE~Hcs~----~qQ~~ma~~l~~i~G 224 (561)
.+|++|.||.+++. ..+.++++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999874 566777777776653
|
The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph |
| >cd04047 C2B_Copine C2 domain second repeat in Copine | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=102.63 Aligned_cols=93 Identities=22% Similarity=0.340 Sum_probs=71.9
Q ss_pred EEEEecCCCCCCCCCccCCCCCCCceeEEEEeccC-CCceeeecccCCCCCCCccccEEEEeee---cCC-ceEEEEEEE
Q 008582 437 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-ADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPE-LALLRIEVH 511 (561)
Q Consensus 437 ~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p-~d~~k~kTkvi~nn~nP~WNE~f~F~v~---~pe-la~Lrf~V~ 511 (561)
-.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||.|| +|.|.+. ..+ ...|+|.||
T Consensus 5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V~ 77 (110)
T cd04047 5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEVY 77 (110)
T ss_pred EEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEEE
Confidence 3568888853 2445678999999987532 12345799999999999999 7877653 222 458999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|++..+++++||++.++++.|..+.
T Consensus 78 d~d~~~~d~~iG~~~~~l~~l~~~~ 102 (110)
T cd04047 78 DYDSSGKHDLIGEFETTLDELLKSS 102 (110)
T ss_pred EeCCCCCCcEEEEEEEEHHHHhcCC
Confidence 9998888999999999999998553
|
There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom |
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.6e-10 Score=123.11 Aligned_cols=121 Identities=24% Similarity=0.317 Sum_probs=93.0
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 509 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf~ 509 (561)
..|+|+|+.|.+|+.. +..+.+||||++.+. |....|.+|++.++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~ll--Pdk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLL--PDKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEc--CCCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 5799999999999743 223467999999986 444678899999999999999999999765544 579999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccC-eEEEEEEEE
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEF 560 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~-atLlv~~~f 560 (561)
|||.|..+++++||++.+||..+..+. .|.+|....-..-.. +.|++...+
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y 293 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCY 293 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEe
Confidence 999999999999999999999887665 355665431111111 366666554
|
|
| >smart00239 C2 Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.4e-10 Score=94.64 Aligned_cols=99 Identities=38% Similarity=0.556 Sum_probs=81.0
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|+.|+++... ......+|||++.+.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 78999999998632 122457999999997532 3467899998889999999999998766567899999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCceEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGIRAVP 540 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~GyR~ip 540 (561)
+..+.+.++|.+.+++..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 876678999999999999999987654
|
Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. |
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.7e-10 Score=121.87 Aligned_cols=116 Identities=22% Similarity=0.259 Sum_probs=89.8
Q ss_pred CCCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eE
Q 008582 428 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--AL 505 (561)
Q Consensus 428 ~p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~ 505 (561)
+|..+.|+|.|+.|.+|.. .+..+..||||++.+........|+||.+.+++.||+|||+|.|.|....+ +.
T Consensus 294 ~p~~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~vp~~~l~~~~ 367 (421)
T KOG1028|consen 294 LPTAGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFDVPPEQLAEVS 367 (421)
T ss_pred ecCCCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEeCCHHHhheeE
Confidence 3567899999999999963 244567899999998754444557899999999999999999998864444 57
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
|.++|||+|..+++++||++.+....-..|-+|| .+.+.-++++
T Consensus 368 l~l~V~d~d~~~~~~~iG~~~lG~~~~~~~~~hW~~m~~~p~~pv 412 (421)
T KOG1028|consen 368 LELTVWDHDTLGSNDLIGRCILGSDSTGEEVRHWQEMLNSPRKPV 412 (421)
T ss_pred EEEEEEEcccccccceeeEEEecCCCCchHHHHHHHHHhCccCce
Confidence 9999999999999999999988887744444554 4444445544
|
|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-09 Score=134.01 Aligned_cols=114 Identities=16% Similarity=0.314 Sum_probs=91.3
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~ 509 (561)
.+.|+|+|++|+++. +.++.+||||.|.+.. ..++||+++++|.||+|||.|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 468999999999984 2245679999999873 236789999999999999999999887654 459999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCce---EEEccC---CCCCcccCeEEEEEEEE
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHD---RKGERYKSVKLLMHFEF 560 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~GyR---~ipL~d---~~G~~~~~atLlv~~~f 560 (561)
|||+|..+ ++.+|.+.+++..+-.+-+ +.+|.+ ++|++ =+|-++|+|
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence 99999875 6699999999998875433 568875 44543 379999988
|
|
| >cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.9e-09 Score=96.91 Aligned_cols=99 Identities=23% Similarity=0.260 Sum_probs=78.2
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCC--CccccEEEEeeec-----------
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI--PSWNEEFEFPLSV----------- 500 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~n--P~WNE~f~F~v~~----------- 500 (561)
|+|.|..+.+++..... ......+||||++.+.+. ...+++|.++.+++| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~~~--~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~~~ 77 (133)
T cd08374 2 LRVIVWNTRDVLNDDTN--ITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVVIK 77 (133)
T ss_pred EEEEEEECcCCcccccc--cCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEEEe
Confidence 78999999997643111 111124799999999875 356789999999988 9999999998765
Q ss_pred ----------CCc--eEEEEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 501 ----------PEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 501 ----------pel--a~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
.++ ..|.++|||.|..++|++||+..++|..|.+|.
T Consensus 78 ~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 78 KEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred eccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 122 578999999999999999999999999987775
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >PLN02270 phospholipase D alpha | Back alignment and domain information |
|---|
Probab=98.97 E-value=4e-09 Score=119.20 Aligned_cols=125 Identities=18% Similarity=0.302 Sum_probs=100.5
Q ss_pred CceEEEEEEEecCCCCC-CCCC------c----c-CCCCCCCceeEEEEeccCCCceeeecccCCCC-CCCccccEEEEe
Q 008582 431 KKTLKVTVYMGEGWYYD-FPHT------H----F-DAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFP 497 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~-~~~~------~----~-~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~ 497 (561)
.++|.|+|+.|.+|+.. .... . + .....+||||.|.+.+ ....||+++.|. .||.|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 46899999999998742 0000 0 0 0123569999999976 245699999886 699999999998
Q ss_pred eecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccC-eEEEEEEEEC
Q 008582 498 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEFI 561 (561)
Q Consensus 498 v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~-atLlv~~~f~ 561 (561)
+..+ .+-|.|.|+|.|..+ ..+||.+.+|+..|..|- ++.|+.+.+|+|+.+ +.|.|+++|+
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~ 148 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF 148 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence 8765 367899999999776 779999999999999994 789999999999954 8999999985
|
|
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.9e-09 Score=116.03 Aligned_cols=92 Identities=27% Similarity=0.451 Sum_probs=76.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
.+++++|++||||.. -+..+.+||||.+.+. ..|+||++|..++||+|||.|+|.+.+. ...|++.||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 478999999999964 2456778999999986 3688999999999999999999998765 346899999
Q ss_pred ecCCC-----------CCCcceEEEEEeCcccCCC
Q 008582 512 EYDMS-----------EKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 512 D~d~~-----------~~dd~iGq~~lpL~~L~~G 535 (561)
|+|.. ..|||+||..|-+..|...
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsge 397 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGE 397 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccc
Confidence 98742 3589999999999888544
|
|
| >cd00030 C2 C2 domain | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.6e-08 Score=84.39 Aligned_cols=90 Identities=39% Similarity=0.570 Sum_probs=73.9
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|.|++|++++.. ......+|||.+.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 57899999988642 1234679999999975 3567899998889999999999998764456799999998
Q ss_pred CCCCCCcceEEEEEeCcccC
Q 008582 514 DMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~ 533 (561)
+..+.+.++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87666899999999999887
|
The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. |
| >cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins | Back alignment and domain information |
|---|
Probab=98.86 E-value=7e-09 Score=106.25 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=107.7
Q ss_pred CCCccceeecccccccccCCC--CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhh
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQ--LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKE 189 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Q--l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~ 189 (561)
+.||++.-|-.|||++-.... -.+.+....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|++
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~~ 84 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECYS 84 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHHH
Confidence 779999999999998754432 44566667788999999999999999864 24689999976555 899999999999
Q ss_pred hccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecC
Q 008582 190 YAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTK 253 (561)
Q Consensus 190 ~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 253 (561)
+--..-.-.|||+|..+.+... -.+-+.++|.+.+..+... ....+|+..++||||++-.+
T Consensus 85 FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 85 FLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 8877777889999999998763 3334555566665554422 24789999999999999865
|
This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which |
| >cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-08 Score=104.02 Aligned_cols=138 Identities=18% Similarity=0.272 Sum_probs=104.3
Q ss_pred CCCCCccceeecccccccccCCCC--CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccc-cchHHHHHHH
Q 008582 110 DMTAPVSHYFIYTGHNSYLTGNQL--NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA-PVELIKCLRS 186 (561)
Q Consensus 110 dm~~PLs~YfI~SSHNTYL~g~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts-~i~f~dvi~a 186 (561)
--++||++|.+-.+||+|..+..- .+...-......|..|.|-++||++..+ ++..++||.-... ..+|.|+++.
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~ 84 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLRE 84 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHH
Confidence 357899999999999999887653 3344444678889999999999999753 4588999865543 7899999999
Q ss_pred HhhhccccCCCceEEEeccCCCHHHHHHHHHHHH-HHhhccccCCCCCC--CCCCCChhhcc--CcEEE
Q 008582 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT-QTLGEILFTPGSEC--LKEFPSPESLK--RRIII 250 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~-~i~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIli 250 (561)
|+++.=..-.=-|||.||++.+.... ..+.+++ ..||+.+|.|+... ...+|++++|. ||-||
T Consensus 85 i~~fL~~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlv 152 (270)
T cd08588 85 VVDFLDANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLL 152 (270)
T ss_pred HHHHHHhCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEE
Confidence 99986433333389999999987654 3333333 68999999886443 46899999998 55444
|
This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). |
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.3e-08 Score=112.74 Aligned_cols=105 Identities=26% Similarity=0.398 Sum_probs=88.9
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.+.|+|.+++|++|+. .+..+-+||||++.+.+ +.-+||++++.++||+|||+|...|.+-....+.+.|
T Consensus 1039 sG~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v 1108 (1227)
T COG5038 1039 SGYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINV 1108 (1227)
T ss_pred cCcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEE
Confidence 5679999999999963 34455689999999975 3367999999999999999999999877777899999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 545 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~ 545 (561)
+|+|...+++.||++.++|..|.+|- -.|||-.+.
T Consensus 1109 ~Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1109 NDWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred eecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 99999999999999999999998885 356766554
|
|
| >PLN02352 phospholipase D epsilon | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.6e-07 Score=100.33 Aligned_cols=118 Identities=19% Similarity=0.264 Sum_probs=89.5
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.++|.++|+.|..+...+... .......||||.|.+.+. ...|| .|.-||+|||+|...+..+-.+-|.|.|
T Consensus 9 hg~l~~~i~~~~~~~~~~~~~-~~~~~~~~~y~tv~~~~~----~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v 80 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPFN-CIFLNGKATYVTIKIGNK----KVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL 80 (758)
T ss_pred ccceEEEEEEeeehhhccccc-ccccCCCCceEEEEeCCc----EEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence 468999999997322111100 001122399999999762 34567 4556999999999988766545789999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc----eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI----RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy----R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+| ...+||.+.+|+..|..|- ++.|+.+.+|+|+.+++|.|+++|+
T Consensus 81 k~-----~~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 130 (758)
T PLN02352 81 KT-----KCSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR 130 (758)
T ss_pred ec-----CCeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence 98 2679999999999998883 6899999999999999999999985
|
|
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.1e-07 Score=98.47 Aligned_cols=96 Identities=24% Similarity=0.374 Sum_probs=76.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC--CceeeecccCCCCCCCccccEEEEeeec----CCce
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSV----PELA 504 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~--d~~k~kTkvi~nn~nP~WNE~f~F~v~~----pela 504 (561)
..+|.|.|+.|.++.. .|..+-+||||.|++...-. -...+||+++..++||+|+|+|+|.|.. .+.|
T Consensus 946 ~q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~A 1019 (1103)
T KOG1328|consen 946 AQTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETA 1019 (1103)
T ss_pred ccchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccc
Confidence 3567788888877642 35567789999999863110 1234689999999999999999999863 3468
Q ss_pred EEEEEEEecCCCCCCcceEEEEEeCccc
Q 008582 505 LLRIEVHEYDMSEKDDFGGQTCLPVSEL 532 (561)
Q Consensus 505 ~Lrf~V~D~d~~~~dd~iGq~~lpL~~L 532 (561)
+|.|+|.|+|-...+||-|++.+.|..+
T Consensus 1020 m~~FTVMDHD~L~sNDFaGEA~L~Lg~v 1047 (1103)
T KOG1328|consen 1020 MLHFTVMDHDYLRSNDFAGEAFLELGDV 1047 (1103)
T ss_pred eEEEEeeccceecccccchHHHHhhCCC
Confidence 9999999999988999999999888776
|
|
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.1e-05 Score=93.33 Aligned_cols=93 Identities=23% Similarity=0.314 Sum_probs=73.0
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|.|+|.+|.++... ..-..+.+|||+.+...+ ....||++++|.+||+|||+|...+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~~----d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKKS----DSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCcccc----cccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 5788999999988532 112346789999999764 3455999999999999999988776421 235899999
Q ss_pred ecCCCCCCcceEEEEEeCcccC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
|.+...+|+++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9777778999999999998875
|
|
| >cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.2e-05 Score=69.77 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=64.1
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|.++.++... .....++.+||||.|.+.+ ..+.||++. -||.|||+|.|.+. ...-+.|.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence 67889999887421 1111346689999999975 457788874 68999999999984 345689999997
Q ss_pred CCCCCCcceEEEEEeCcccCCC
Q 008582 514 DMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~G 535 (561)
.. ...-.||...++++.|...
T Consensus 69 ~~-~~~~Pi~llW~~~sdi~Ee 89 (109)
T cd08689 69 GG-DQPVPVGLLWLRLSDIAEE 89 (109)
T ss_pred CC-CeecceeeehhhHHHHHHH
Confidence 53 3345788877887766433
|
This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that |
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.3e-05 Score=84.11 Aligned_cols=104 Identities=28% Similarity=0.395 Sum_probs=81.9
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC-Cc-eeeecccCCCCCCCccccEEEEeee---cCCceE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DT-VMKKTKTLEDNWIPSWNEEFEFPLS---VPELAL 505 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~-d~-~k~kTkvi~nn~nP~WNE~f~F~v~---~pela~ 505 (561)
..+++|+|+.|.+|.+. +.+.-.|||+|.+.|... |. .|+.|++..||..|.|||+|+|.+. .|+---
T Consensus 1124 ehkvtvkvvaandlkwq-------tsgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YE 1196 (1283)
T KOG1011|consen 1124 EHKVTVKVVAANDLKWQ-------TSGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYE 1196 (1283)
T ss_pred cceEEEEEEecccccch-------hccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEE
Confidence 35789999999988542 334557899999998543 22 3456888899999999999999875 366667
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccC-CCc--eEEEc
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELK-QGI--RAVPL 541 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~-~Gy--R~ipL 541 (561)
|.|+|+|+.....|.++|.+.++|.++. .|- .|+||
T Consensus 1197 L~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pL 1235 (1283)
T KOG1011|consen 1197 LQFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPL 1235 (1283)
T ss_pred EEEeehhheeecccceeeeeeeehhhHhhcCceeEeeec
Confidence 9999999987777889999999999874 453 57787
|
|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.8e-05 Score=84.90 Aligned_cols=109 Identities=23% Similarity=0.300 Sum_probs=83.6
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
...|.|+|..|++||.. +..+..|||+.|.+.. ....||.++-.++.|.|.|.|.|.+.- ....|.|-|
T Consensus 4 ~~sl~vki~E~knL~~~------~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fYv 72 (800)
T KOG2059|consen 4 EQSLKVKIGEAKNLPSY------GPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFYV 72 (800)
T ss_pred ccceeEEEeecccCCCC------CCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecCc-ceeeEEEEE
Confidence 35689999999999742 3456679999999864 346689999999999999999999843 356689999
Q ss_pred EecCCCCCCcceEEEEEeCcccC--CCce-EEEc--cCCCCCcccC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELK--QGIR-AVPL--HDRKGERYKS 551 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~--~GyR-~ipL--~d~~G~~~~~ 551 (561)
||.| ..+|+.||.++|.-..|. +|.- |..| .|+.-+.-+.
T Consensus 73 ~D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEVQG~ 117 (800)
T KOG2059|consen 73 WDRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEVQGK 117 (800)
T ss_pred eccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhhcee
Confidence 9999 788999999999877663 4542 3344 5666665443
|
|
| >KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=7.4e-05 Score=80.63 Aligned_cols=120 Identities=18% Similarity=0.284 Sum_probs=91.2
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccE-EEEeeecCCc--eEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE-FEFPLSVPEL--ALLRI 508 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~-f~F~v~~pel--a~Lrf 508 (561)
++|.|+|..|.+||...+ .....|.||+|.+.. ...||.+...++||.||.. |.|.|...++ ..|.+
T Consensus 3 gkl~vki~a~r~lpvmdk-----asd~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMDK-----ASDLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCccccc-----ccccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 578999999999985321 123457899999874 5678999999999999955 8999987665 46899
Q ss_pred EEEecCCCCCCcceEEEEEeCcccC----------CCc---eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELK----------QGI---RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~----------~Gy---R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.+.|+|..+.+|-||.+.+.++-|. .|. -|+|++|.-..--+...+.|++++|
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlf 138 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLF 138 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeeh
Confidence 9999999888999999999888663 232 3778887543333445778887764
|
|
| >cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00041 Score=71.22 Aligned_cols=135 Identities=20% Similarity=0.306 Sum_probs=95.4
Q ss_pred CCCccceeecccccccccCCCCC---------CCCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHH
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLN---------SDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELI 181 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~ 181 (561)
+.||++=+|--|||+.--+-... +..--.....-|..|.|-+.|.|.-.+ .+++-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 45999999999999875432221 122223356678899999999996432 2245678887543 38999
Q ss_pred HHHHHHhhhccccCCCceEEEeccCCC------HHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc--cCcEEEe
Q 008582 182 KCLRSIKEYAFVASEYPVVITLEDHLT------PDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL--KRRIIIS 251 (561)
Q Consensus 182 dvi~aI~~~AF~~S~yPvIlSlE~Hcs------~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik 251 (561)
+|++.|+++.=.. .=-|||.+ .|.. +++-..+.++|.+.||+.|+.|.. .....|+.++| +||.+|-
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv 158 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVII 158 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEE
Confidence 9999999986444 66688887 4442 577788899999999999998753 23456899996 5565544
|
This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI |
| >cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00079 Score=69.50 Aligned_cols=136 Identities=15% Similarity=0.221 Sum_probs=95.0
Q ss_pred CCCccceeecccccccccCCCCCC---------------------CCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEE
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLNS---------------------DCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVL 169 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g---------------------~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~ 169 (561)
+.||.+..|-.|||+.--+-.-.+ ..--.....=|..|+|-.+|++.-.+ .+++-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 579999999999998643322211 11112245667899999999995432 12456788
Q ss_pred eCCcccccchHHHHHHHHhhhccccCCCceEEEeccC-----CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc
Q 008582 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH-----LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL 244 (561)
Q Consensus 170 HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~H-----cs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~L 244 (561)
||-- +-.+|.+|++.|+++.=....=-|||.++.. ++.++-..+.+.|.++||+.++.+ .....-|+.++|
T Consensus 86 H~~~--~~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLY--SGEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eecc--cccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 8732 2388999999999975444455688888643 335778888899999999999976 223466789999
Q ss_pred c--CcEEEe
Q 008582 245 K--RRIIIS 251 (561)
Q Consensus 245 k--~KIlik 251 (561)
. ||-+|-
T Consensus 162 ~~~gk~viv 170 (288)
T cd08587 162 WESGKRVIV 170 (288)
T ss_pred HhCCCeEEE
Confidence 8 774443
|
This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be |
| >KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.51 E-value=8.4e-05 Score=85.90 Aligned_cols=96 Identities=21% Similarity=0.236 Sum_probs=76.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ecCC--ceEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPE--LALLRI 508 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~pe--la~Lrf 508 (561)
.+|+|-|-.+++|+.- .-+..|||||+..+...|....|+|||+++.+.||.|||.+.+.. .... ...|.+
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence 4567777777887531 123568999999999888888899999999999999999998872 2222 246899
Q ss_pred EEEecCCCCCCcceEEEEEeCcccC
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
.||..+....+.++|.+++||..+.
T Consensus 1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeecccceeeeeeeeeeecchhhcc
Confidence 9999988888999999999998763
|
|
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00016 Score=82.64 Aligned_cols=124 Identities=22% Similarity=0.277 Sum_probs=93.8
Q ss_pred ccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCCcccCCCCCCCCCceEEEEEEEecCCCCCCCCCccCCCC
Q 008582 378 QRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYS 457 (561)
Q Consensus 378 ~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~Gyvl~P~~~~p~~~~L~V~Visaq~L~~~~~~~~~~~~~ 457 (561)
-+.+.||||-+ |=-|+|.-|..| +-|| ...|+...++|.|..|.+|.. .|..+
T Consensus 580 fKgl~rIyp~~-~~~~~p~~pr~~---------~~~~-----------~~~pi~~LvrVyvv~A~~L~p------~D~ng 632 (1105)
T KOG1326|consen 580 FKGLFRIYPVP-RNPSSPAPPRHF---------LDLP-----------KEEPIKCLVRVYVVEAFSLQP------SDGNG 632 (1105)
T ss_pred hhcceeeecCC-CccCCCCChhhh---------hccc-----------ccCcceeeEEEEEEEeeeccc------cCCCC
Confidence 35789999998 666777777655 1222 113556677888888888743 24456
Q ss_pred CCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcc
Q 008582 458 PPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE 531 (561)
Q Consensus 458 ~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~ 531 (561)
..||||++.+.+. ....++..+.+++||+|++-|++....|-...+.+.|||+|..+.|+.||+..+.|..
T Consensus 633 ~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 633 DADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIVEVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred CcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhcceeEEEEeecccccchhhceehhhhh
Confidence 6899999998641 1224567788999999999999988888777899999999999999999999988764
|
|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00036 Score=77.36 Aligned_cols=76 Identities=26% Similarity=0.418 Sum_probs=62.5
Q ss_pred CCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC---------------CceEEEEEEEe-cCCCCCCc
Q 008582 457 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELALLRIEVHE-YDMSEKDD 520 (561)
Q Consensus 457 ~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p---------------ela~Lrf~V~D-~d~~~~dd 520 (561)
+..|||+.|...|.-.... ++|++++.+-+|.|||.|.|.+... ++..|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~~~-~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKLKE-KKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchhhc-cccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 3479999999987433333 6899999999999999999998755 56778999999 46666699
Q ss_pred ceEEEEEeCcccC
Q 008582 521 FGGQTCLPVSELK 533 (561)
Q Consensus 521 ~iGq~~lpL~~L~ 533 (561)
|+|+..+|+..++
T Consensus 228 FlGevrv~v~~~~ 240 (800)
T KOG2059|consen 228 FLGEVRVPVDVLR 240 (800)
T ss_pred hceeEEeehhhhh
Confidence 9999999999887
|
|
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00033 Score=71.74 Aligned_cols=105 Identities=23% Similarity=0.288 Sum_probs=75.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCce--EEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIE 509 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela--~Lrf~ 509 (561)
..|.|+++.+..+. .++..+-.||||++.+...-....|+||.+.+++.||.||+.|.|.+..-+++ -+.+.
T Consensus 233 ~~l~vt~iRc~~l~------ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~ls 306 (362)
T KOG1013|consen 233 PGLIVTIIRCSHLA------SSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALS 306 (362)
T ss_pred CceEEEEEEeeeee------ccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEe
Confidence 35788888766553 24555678999999887322233467899999999999999999999877775 57889
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCc
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 548 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~ 548 (561)
|||++....++++|-.. ..+||.-++++..|.+
T Consensus 307 vgd~~~G~s~d~~GG~~------~g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 307 VGDYDIGKSNDSIGGSM------LGGYRRGEVHKHWGRC 339 (362)
T ss_pred ecccCCCcCccCCCccc------ccccccchhhcCcccc
Confidence 99998766678887432 2345555666555554
|
|
| >cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0065 Score=57.17 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=69.5
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCc-eeeecccCCCCCCCccccEEEEeeec---CCceE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELAL 505 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~-~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~ 505 (561)
..+.++|+|+++.++... ...|.||++.+......- ....|+.+.. .++.|||-++|.|.. |-.|.
T Consensus 6 ~~~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~Ar 75 (158)
T cd08398 6 INSNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSAR 75 (158)
T ss_pred CCCCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhhe
Confidence 346799999999987532 124779999887422111 1123443332 468999999998864 44589
Q ss_pred EEEEEEecCCCC----CCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 506 LRIEVHEYDMSE----KDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 506 Lrf~V~D~d~~~----~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
|+|+||+..... ....+|++.++|= .|++|...+.|.
T Consensus 76 L~iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 76 LCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 999999975321 1246999999984 588998766664
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c |
| >cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0082 Score=57.36 Aligned_cols=105 Identities=20% Similarity=0.196 Sum_probs=71.6
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCc-eeeecccCCCCCCCccccEEEEeeec---CCceE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELAL 505 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~-~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~ 505 (561)
....++|+|+++.++.. .....+.||++.+......- ....|+.+.-+..+.|||.+.|.+.. |-.|.
T Consensus 6 ~~~~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~Ar 77 (173)
T cd08693 6 IEEKFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMAR 77 (173)
T ss_pred cCCCEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHe
Confidence 34579999999998853 01234668888876322111 12345544434569999999998764 55689
Q ss_pred EEEEEEecCCCC----------------CCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 506 LRIEVHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 506 Lrf~V~D~d~~~----------------~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
|+|.||+..... ....||++.++|= .|++|...+.|.
T Consensus 78 Lciti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 78 LCFAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 999999965321 1369999999984 588998777664
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty |
| >cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0077 Score=56.35 Aligned_cols=104 Identities=19% Similarity=0.193 Sum_probs=70.6
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCce-eeecccCCCCCCCccccEEEEeeec---CCceEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 507 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~-k~kTkvi~nn~nP~WNE~f~F~v~~---pela~Lr 507 (561)
..++|+|.+..+.... .....+.||++.+.-...... ...|+......++.|||.+.|.+.. |-.|.|.
T Consensus 8 ~~~~i~i~~~~~~~~~-------~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~ 80 (156)
T cd08380 8 FNLRIKIHGITNINLL-------DSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLC 80 (156)
T ss_pred CCeEEEEEeecccccc-------CCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEE
Confidence 4678888877766420 112346688888764222122 2234433333579999999998754 5558999
Q ss_pred EEEEecCCCC--CCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 508 IEVHEYDMSE--KDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~--~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
|+||+.+... ....||++.++|= .|++|...+.|.
T Consensus 81 itl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 81 LSIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 9999976443 3579999999984 588999888885
|
C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm |
| >cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.006 Score=63.10 Aligned_cols=137 Identities=18% Similarity=0.259 Sum_probs=90.5
Q ss_pred CCCccceeecccccccc---cCCCCCCC------------------------CChHHHHHHHhCCCcEEEEEeeCCCCCC
Q 008582 112 TAPVSHYFIYTGHNSYL---TGNQLNSD------------------------CSDVPIIRALQKGVRVIELDIWPNSKKD 164 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL---~g~Ql~g~------------------------Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~ 164 (561)
+.||.+..|--|||+-- ..+.-.|. +-......-|..|.|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 46999999999999642 22221211 1112245567899999999996433234
Q ss_pred CceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccC--CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 008582 165 NVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH--LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (561)
Q Consensus 165 ~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~H--cs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~ 242 (561)
+-.++||-. +. ++.||++.|+++.=....=-|||.+... -+.++-..+.+.|.++||+.|+.+.. ...-|+.+
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL~ 161 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFNHFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTLE 161 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEEccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcHH
Confidence 578999843 22 9999999999975333445588888632 13455567888999999999985432 23457899
Q ss_pred hcc---CcEEEecC
Q 008582 243 SLK---RRIIISTK 253 (561)
Q Consensus 243 ~Lk---~KIlik~K 253 (561)
+|. .+|+|-..
T Consensus 162 ~l~~~~krVIi~y~ 175 (290)
T cd08616 162 YLWEKGYQVIVFYH 175 (290)
T ss_pred HHHhCCCEEEEEEC
Confidence 997 33555443
|
This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to |
| >cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0082 Score=57.22 Aligned_cols=117 Identities=23% Similarity=0.208 Sum_probs=77.1
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCc-eeeecccC--CCCC--CCccccEEEEeeec---C
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTL--EDNW--IPSWNEEFEFPLSV---P 501 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~-~k~kTkvi--~nn~--nP~WNE~f~F~v~~---p 501 (561)
+...++|+|.++++++.... ....|.||++.+.-....- ....|+.. .+.+ .+.|||.+.|.+.. |
T Consensus 6 v~~~~~i~v~~~h~~~~~~~------~~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LP 79 (171)
T cd04012 6 VTDLLSVTVSSLHRIPPTWV------QSFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLP 79 (171)
T ss_pred ccccEEEEEEEeecCChHHh------hccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCC
Confidence 34578999999998874321 1234679999887422211 12244432 2332 57899999998764 5
Q ss_pred CceEEEEEEEecCCCC---------CCcceEEEEEeCc----ccCCCceEEEccC-CCCCcccCe
Q 008582 502 ELALLRIEVHEYDMSE---------KDDFGGQTCLPVS----ELKQGIRAVPLHD-RKGERYKSV 552 (561)
Q Consensus 502 ela~Lrf~V~D~d~~~---------~dd~iGq~~lpL~----~L~~GyR~ipL~d-~~G~~~~~a 552 (561)
-.|.|.|.||+..... ....||++.++|= .|++|...+.|.- ....+++.+
T Consensus 80 rearL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~~~~ 144 (171)
T cd04012 80 RESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPLGPA 144 (171)
T ss_pred hhHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcCCCC
Confidence 5589999999975433 3469999999983 5889999888853 344444333
|
There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c |
| >cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0026 Score=57.25 Aligned_cols=98 Identities=22% Similarity=0.383 Sum_probs=65.5
Q ss_pred EEEEEEEecCCCCC-------CCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec------
Q 008582 434 LKVTVYMGEGWYYD-------FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV------ 500 (561)
Q Consensus 434 L~V~Visaq~L~~~-------~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~------ 500 (561)
|+|.|+.|.||... .+.......-..++||++.+.-+|.. .+++|+++.++|-|.|+..++|.+..
T Consensus 1 lsv~I~RA~GLqaAA~~la~~~~~l~y~a~VGVN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~ 79 (143)
T cd08683 1 LSVQIHRASGLQAAARALAEQDPSLQYSATVGVNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNS 79 (143)
T ss_pred CeEEeehhhhHHHHHHHHhhhCcccccceecccceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCC
Confidence 46778887777420 00000111112578999998877654 46689999999999999999997541
Q ss_pred ---------CCceEEEEEEEecCCC----------CCCcceEEEEEeCccc
Q 008582 501 ---------PELALLRIEVHEYDMS----------EKDDFGGQTCLPVSEL 532 (561)
Q Consensus 501 ---------pela~Lrf~V~D~d~~----------~~dd~iGq~~lpL~~L 532 (561)
-+.+-+.|.||+.... .+|-+||.+.+|+..|
T Consensus 80 Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~~~~~~DilLG~v~IPl~~L 130 (143)
T cd08683 80 GEAISLAELLESAEIILEVWHRNPKSAGDTIKIETSGDILLGTVKIPLRDL 130 (143)
T ss_pred CccccHHHHhhcceEEeeeeecCCccccceeccCcCCcEEEEEEEeeHHHH
Confidence 1225688999996532 2345788888888776
|
C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc |
| >cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0047 Score=61.68 Aligned_cols=97 Identities=21% Similarity=0.274 Sum_probs=66.0
Q ss_pred ccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccc------cchHHHHHHHHhhh--cc-
Q 008582 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------PVELIKCLRSIKEY--AF- 192 (561)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts------~i~f~dvi~aI~~~--AF- 192 (561)
-|||-|.--. ....||..||-.||+|||=- + ++.+|.|-..+.. +..+..+.+.++.. +|
T Consensus 4 hsHNDY~r~~---------Pl~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWRKR---------PLYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred cccccccccc---------chHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 5999998543 45569999999999999953 2 3678888765543 35566666655443 23
Q ss_pred ccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccC
Q 008582 193 VASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (561)
Q Consensus 193 ~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~ 229 (561)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 4456799999999998665434444444556666655
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.00046 Score=70.66 Aligned_cols=100 Identities=22% Similarity=0.270 Sum_probs=75.1
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC---ceEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe---la~Lr 507 (561)
...+..++..|.+|.. .+..+..||||+..+...-....+.+|++..|+.||.|||+..+.....+ .-.+|
T Consensus 92 ~~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~R 165 (362)
T KOG1013|consen 92 SRMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLR 165 (362)
T ss_pred hhhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhh
Confidence 4578889999988632 34456789999988764333345678999999999999988666533222 34689
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
+.|+|.+...+++++||.-+++..|.+-.
T Consensus 166 k~vcdn~~~~~~~sqGq~r~~lkKl~p~q 194 (362)
T KOG1013|consen 166 KVVCDNDKKTHNESQGQSRVSLKKLKPLQ 194 (362)
T ss_pred eeeccCcccccccCcccchhhhhccChhh
Confidence 99999998888999999988888886543
|
|
| >cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.011 Score=56.11 Aligned_cols=64 Identities=20% Similarity=0.204 Sum_probs=51.1
Q ss_pred CCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCH
Q 008582 132 QLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTP 209 (561)
Q Consensus 132 Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~ 209 (561)
+...+-|.++|..|+..||++||+|+.=-.| +.|||.|- -.+|.|+++..++ -+.|.+|.-...
T Consensus 9 ~~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 9 GEAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 3456899999999999999999999994333 36999997 7789999988776 345677776653
|
The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho |
| >cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.011 Score=55.68 Aligned_cols=85 Identities=16% Similarity=0.191 Sum_probs=60.7
Q ss_pred CCCceeEEEEeccCCCc-eeeecccCCCCCCCccccEEEEeeecCC---ceEEEEEEEecCCCCCCcceEEEEEeCc---
Q 008582 458 PPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIEVHEYDMSEKDDFGGQTCLPVS--- 530 (561)
Q Consensus 458 ~~DpyV~V~l~g~p~d~-~k~kTkvi~nn~nP~WNE~f~F~v~~pe---la~Lrf~V~D~d~~~~dd~iGq~~lpL~--- 530 (561)
.+|.||++.+......- .-..|+.+.-+..+.|||-+.|.|...+ .|.|+|+||+.+..++...+|.+.++|=
T Consensus 29 ~~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~ 108 (159)
T cd08397 29 NSDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKD 108 (159)
T ss_pred CCCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCC
Confidence 35779999887422111 1224544443456889999999987544 4899999999875555679999999984
Q ss_pred -ccCCCceEEEcc
Q 008582 531 -ELKQGIRAVPLH 542 (561)
Q Consensus 531 -~L~~GyR~ipL~ 542 (561)
.|+.|...+.|.
T Consensus 109 g~Lr~G~~~l~lw 121 (159)
T cd08397 109 GTLRRGRQKLRVW 121 (159)
T ss_pred CcEecCCEEEEEE
Confidence 588999888875
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty |
| >cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0085 Score=59.25 Aligned_cols=40 Identities=20% Similarity=0.317 Sum_probs=33.7
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+-|.++|..|+..|+.+||+|++=-.| +.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 35778999999999999999999996444 46999997765
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG) |
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0053 Score=69.58 Aligned_cols=87 Identities=22% Similarity=0.174 Sum_probs=70.5
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 508 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf 508 (561)
+..+...+++++|. . + -.|+|..+-..| .+..||.+.+++.||+||+...|.+...+..+.+|
T Consensus 51 ~~~~~~~~~~~~~~-~--~----------~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 113 (644)
T PLN02964 51 DFSGIALLTLVGAE-M--K----------FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARI 113 (644)
T ss_pred cccCeEEEEeehhh-h--c----------cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEE
Confidence 34577889998886 1 1 137776555555 46789999999999999999999998888888999
Q ss_pred EEEecCCCCCCcceEEEEEeCccc
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSEL 532 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L 532 (561)
.|+|.+....++++|.+.+.+..+
T Consensus 114 ~~~~~~~~s~n~lv~~~e~~~t~f 137 (644)
T PLN02964 114 SVFETNRLSKNTLVGYCELDLFDF 137 (644)
T ss_pred EEEecCCCCHHHhhhheeecHhhc
Confidence 999999999999999998877654
|
|
| >cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.006 Score=51.29 Aligned_cols=90 Identities=18% Similarity=0.251 Sum_probs=59.7
Q ss_pred EEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEEEEEec
Q 008582 436 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEY 513 (561)
Q Consensus 436 V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf~V~D~ 513 (561)
|+|+.+.++..+-. ....+.-||+=-+ .+| .....||.+.....||+|+|+|.|.+....+ ..|.|.|+.
T Consensus 3 itv~~c~d~s~~~~-----~~e~~~i~ikg~~-tl~-kpv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~- 74 (103)
T cd08684 3 ITVLKCKDLSWPSS-----CGENPTIYIKGIL-TLP-KPVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQT- 74 (103)
T ss_pred EEEEEecccccccc-----cCcCCeeEEEEEE-ecC-CCccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeec-
Confidence 56777777754311 1122223443222 122 2346688888888999999999999865444 457888887
Q ss_pred CCCCCCcceEEEEEeCcccCC
Q 008582 514 DMSEKDDFGGQTCLPVSELKQ 534 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~ 534 (561)
...+.+.||++.+.++++.+
T Consensus 75 -~~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 75 -QTPRKRTIGECSLSLRTLST 94 (103)
T ss_pred -cCCccceeeEEEeecccCCH
Confidence 34568999999999998754
|
Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos |
| >cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.016 Score=57.60 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45788999999999999999999995333 46999998876
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.036 Score=53.18 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=65.3
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec---CCceEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~Lr 507 (561)
...++|+|.++..... +.......||++.+.....-....+|.....+.+|.|||-+.|.|.. |-.|.|+
T Consensus 9 ~~~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc 81 (178)
T cd08399 9 DRKFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLN 81 (178)
T ss_pred CCCEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEE
Confidence 3568888887763211 11112345788877642111122345555445579999999999864 4458999
Q ss_pred EEEEecCCC----------------CCCcceEEEEEeCc----ccCCCceEEEc
Q 008582 508 IEVHEYDMS----------------EKDDFGGQTCLPVS----ELKQGIRAVPL 541 (561)
Q Consensus 508 f~V~D~d~~----------------~~dd~iGq~~lpL~----~L~~GyR~ipL 541 (561)
|.||+.... .....||++.++|- .|++|...+.+
T Consensus 82 ~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 82 LQIYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 999985211 12458899988874 58899876655
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir |
| >PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0072 Score=59.80 Aligned_cols=40 Identities=23% Similarity=0.255 Sum_probs=31.8
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
..+.|.++|..|+..|+++||+|||=-.| +.|||.|..++
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l 47 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTL 47 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBS
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCee
Confidence 34899999999999999999999995444 47999998654
|
; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B .... |
| >cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.015 Score=57.43 Aligned_cols=40 Identities=13% Similarity=0.227 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+.|..+|..|+..||..||+|++=-.| +.|||.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 45788999999999999999999996444 46999998875
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor. |
| >cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.043 Score=56.23 Aligned_cols=137 Identities=17% Similarity=0.243 Sum_probs=90.1
Q ss_pred CCCCCCccceeecccccccccC---CCCC---CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHH
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTG---NQLN---SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g---~Ql~---g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (561)
.|-+.||++=.|--||||.-.. ..+. +.+--.....=|..|+|-+.|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 4556899999999999987532 2211 1222234667789999999998854 257999963 2468999
Q ss_pred HHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCc-EEEecCC
Q 008582 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRR-IIISTKP 254 (561)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 254 (561)
|++.|+++-=....=-|||++......+......+.|.+.||+.|+.+. ...... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcC
Confidence 9999998643333345999996554322222355788999999998753 222222 67777654 5555554
|
The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u |
| >cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.026 Score=56.02 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+.|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999995444 46999997765
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE. |
| >cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.095 Score=53.94 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=89.0
Q ss_pred CCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEe---eCC----CCCCCceEEeCCcccccchHHHHH
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI---WPN----SKKDNVDVLHGGTMTAPVELIKCL 184 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~---Wdg----~~~~~piv~HG~Tlts~i~f~dvi 184 (561)
+.||++..|-.|||+.-.+---.+..--.....=|..|+|-+.|=| ++. ...++-..+|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 5799999999999987554322222323346677899999987755 221 01123344555 44567999999
Q ss_pred HHHhhhccccCCCceEEEecc-----CC-CHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccC---cEEEecC
Q 008582 185 RSIKEYAFVASEYPVVITLED-----HL-TPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKR---RIIISTK 253 (561)
Q Consensus 185 ~aI~~~AF~~S~yPvIlSlE~-----Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~K 253 (561)
+.|+.+.=....=-|||+|-+ || .+.+ ..+.+.+.+.|++.-+.+. ......-|+.++|.. ++||--+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~-~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSA-QEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhH-HHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999987545555679999943 44 3554 5778889999988544432 111234578898854 4555443
|
This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl |
| >cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.051 Score=54.88 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=34.3
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
=+-|.++|..|+..||..||+|++=-.| +.|||.|-.||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4778999999999999999999995444 469999999873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2 | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.04 Score=50.71 Aligned_cols=82 Identities=23% Similarity=0.325 Sum_probs=55.2
Q ss_pred ceeEEEEeccCCCce--eeecccCCCC-CCCccccEEEEeee---cCCceEEEEEEEecCCCCCC----cceEEEEEeCc
Q 008582 461 FYARVGIAGVPADTV--MKKTKTLEDN-WIPSWNEEFEFPLS---VPELALLRIEVHEYDMSEKD----DFGGQTCLPVS 530 (561)
Q Consensus 461 pyV~V~l~g~p~d~~--k~kTkvi~nn-~nP~WNE~f~F~v~---~pela~Lrf~V~D~d~~~~d----d~iGq~~lpL~ 530 (561)
.||++.+.-....-. ...|+.+.-+ .+|.|||.+.|.+. .|-.|.|.|+|+..+..... ..||++.+||=
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 467777652221111 2356655555 68999999999976 46669999999997755444 69999999984
Q ss_pred ----ccCCCceEEEcc
Q 008582 531 ----ELKQGIRAVPLH 542 (561)
Q Consensus 531 ----~L~~GyR~ipL~ 542 (561)
.|++|...++|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 478898888775
|
7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A .... |
| >cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.11 Score=51.98 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|..++.+|+..||..||+|+|=-.| +.|||.|=.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 4778999999999999999999994333 36999998775
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.09 Score=52.77 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=32.7
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
+-|.++|..|+..||+.||+|+.=-.| +.|||.|=.|+
T Consensus 15 ENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 15 ENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 778999999999999999999996444 46999997665
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.11 Score=44.01 Aligned_cols=62 Identities=13% Similarity=0.343 Sum_probs=49.3
Q ss_pred HHHHHHHHhhC-C---CCcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE-N---GTMTVDHLHRFLIEV--QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~-~---~~l~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|-.+|.+|++ + ++|+.++|+..|.++ .++. .+.+++.++++.... -+.+.++++.|..+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~------d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDR------NKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcC------CCCCCCcHHHHHHHHH
Confidence 47789999996 2 599999999999752 4664 689999999987652 2346799999998876
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.018 Score=64.37 Aligned_cols=58 Identities=24% Similarity=0.507 Sum_probs=47.2
Q ss_pred eecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCC---------------------------------C---CCc
Q 008582 477 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS---------------------------------E---KDD 520 (561)
Q Consensus 477 ~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~---------------------------------~---~dd 520 (561)
+-|.+...++||.|+|.|.|.|....-..+.+-+||+|.- + .||
T Consensus 179 katsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDD 258 (1103)
T KOG1328|consen 179 KATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDD 258 (1103)
T ss_pred hhcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCccccc
Confidence 4577778889999999999999866666789999998732 1 279
Q ss_pred ceEEEEEeCcccCC
Q 008582 521 FGGQTCLPVSELKQ 534 (561)
Q Consensus 521 ~iGq~~lpL~~L~~ 534 (561)
|+|...+||.++.+
T Consensus 259 FLGciNipl~EiP~ 272 (1103)
T KOG1328|consen 259 FLGCINIPLAEIPP 272 (1103)
T ss_pred cccccccchhcCCc
Confidence 99999999999853
|
|
| >cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.12 Score=52.47 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=32.7
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~T 173 (561)
.-+-|..+|..|+..|+..||+|+|=-.| +.|||+|..+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 45788999999999999999999994333 4699999863
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.16 Score=50.41 Aligned_cols=78 Identities=22% Similarity=0.344 Sum_probs=53.4
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc------------------------ccc-hHHHHHHHH
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------------------------APV-ELIKCLRSI 187 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt------------------------s~i-~f~dvi~aI 187 (561)
..-+-|.+++..|+..||+.||+|++=-.| +.|||.|=.|+. .+| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345788999999999999999999995433 469999977652 124 589999876
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHH
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT 220 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~ 220 (561)
++. +.|-||.-.. .....+++.++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~ 113 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVE 113 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHH
Confidence 431 2466666543 22334444444
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form. |
| >KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.029 Score=58.69 Aligned_cols=127 Identities=24% Similarity=0.213 Sum_probs=85.4
Q ss_pred CCCCCCCCcccccccccce-eeeecccCCCCcccCCCCCCCCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEe
Q 008582 390 RVDSSNYNPLIGWSHGAQM-VAFNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIA 468 (561)
Q Consensus 390 RidSSNf~P~~~W~~G~Qm-VALN~QnG~~Gyvl~P~~~~p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~ 468 (561)
=+|+.- |.|..|=|. +|=|+|--.. .....++.|.|.|+.|.+|.... .....++|||+|.+.
T Consensus 237 FvDglG----P~q~VgRq~la~P~mg~iq~-------~~~d~~g~l~vEii~ar~l~~k~-----~~k~~~apyVkVYlL 300 (405)
T KOG2060|consen 237 FVDGLG----PAQLVGRQTLAAPNMGDIQI-------ALMDSKGDLEVEIIRARGLVVKP-----GSKSLPAPYVKVYLL 300 (405)
T ss_pred hhcccC----chhhhhhhhhcCcccccchh-------hhhcccCceeEEEEecccccccC-----CcccccCceeEEEEc
Confidence 356665 578888886 4555551000 01123568999999999996421 112357899999998
Q ss_pred ccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe-cCCCCCCcceEEEEEeCcccC
Q 008582 469 GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE-YDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 469 g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D-~d~~~~dd~iGq~~lpL~~L~ 533 (561)
+...-..+++|+...++..|.+-....|.-..+ ...|.+.||- +....++.|+|-+.+-+.+|.
T Consensus 301 ~~g~c~ak~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~tv~gdygRmd~k~fmg~aqi~l~eL~ 365 (405)
T KOG2060|consen 301 ENGFCIAKKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQGTVWGDYGRMDHKSFMGVAQIMLDELN 365 (405)
T ss_pred CCCceecccccccccccCchhhhhhhhhccCCC-ccEEEEEEeccccccchHHHhhHHHHHhhhhc
Confidence 766555688999999999998888788775433 5578888885 344455678887766666553
|
|
| >cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.23 Score=48.15 Aligned_cols=47 Identities=15% Similarity=0.124 Sum_probs=41.7
Q ss_pred ChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHh
Q 008582 138 SDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (561)
Q Consensus 138 s~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (561)
+..++.+|+.. .-||+|+|.- | +.+||.|=.|+..-.+|+||++++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 57899999998 9999999986 4 5799999999988888999998874
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.072 Score=54.27 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+.
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~ 53 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLD 53 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCccc
Confidence 4778999999999999999999996544 479999998864
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4. |
| >cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.08 Score=53.24 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.-+-|.++|.+|+..||+.||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45788999999999999999999994333 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.095 Score=55.53 Aligned_cols=120 Identities=18% Similarity=0.208 Sum_probs=84.1
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-CCc--------
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PEL-------- 503 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-pel-------- 503 (561)
.|.+.|.+|++++..-... -.|.||++++.-......+.||++++++..|.|+|.|...+.- +.+
T Consensus 368 elel~ivrg~~~pvp~gp~------hld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~f 441 (523)
T KOG3837|consen 368 ELELAIVRGQKNPVPGGPM------HLDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRRF 441 (523)
T ss_pred HhHHHHhhcccCCCCCCch------hHHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHHH
Confidence 4666777777776432111 1356888887644323456789999999999999999888752 111
Q ss_pred --eEEEEEEEecCCC-CCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 504 --ALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 504 --a~Lrf~V~D~d~~-~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
--+.|.++..... .+|.++|.+-+.|.-|..-. .+++|+| |+..-|+.|-|++.+
T Consensus 442 kr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRi 502 (523)
T KOG3837|consen 442 KRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRI 502 (523)
T ss_pred HhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEE
Confidence 2378999997644 35779999999888775543 4689987 666667789888754
|
|
| >cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.12 Score=52.39 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=34.1
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 15 PENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 4778999999999999999999995444 469999998863
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo |
| >cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.15 Score=51.41 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|..+|..|+..||..||+|+|=-.| +.|||.|-.||
T Consensus 14 pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l 52 (256)
T cd08601 14 PEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETL 52 (256)
T ss_pred CCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCcc
Confidence 4889999999999999999999996444 46999999886
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.23 Score=50.67 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=34.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|=.|+.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 445778999999999999999999994333 369999988763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated. |
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.34 Score=53.51 Aligned_cols=83 Identities=22% Similarity=0.302 Sum_probs=66.3
Q ss_pred eecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCC----CCCcceEEEEEeCccc-CCCceEEEccCCCCCcccC
Q 008582 477 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS----EKDDFGGQTCLPVSEL-KQGIRAVPLHDRKGERYKS 551 (561)
Q Consensus 477 ~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~----~~dd~iGq~~lpL~~L-~~GyR~ipL~d~~G~~~~~ 551 (561)
.+|.++.+..||.|-+.|.....+.....|+|.|+|-+.. ...+|+|++...+..+ ..+-+.++|.-+.++....
T Consensus 43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~ 122 (529)
T KOG1327|consen 43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS 122 (529)
T ss_pred cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence 4788999999999999998888888888999999997643 3468999998888765 4455667777666677777
Q ss_pred eEEEEEEE
Q 008582 552 VKLLMHFE 559 (561)
Q Consensus 552 atLlv~~~ 559 (561)
+++.|+++
T Consensus 123 g~iti~ae 130 (529)
T KOG1327|consen 123 GTITISAE 130 (529)
T ss_pred ccEEEEee
Confidence 78888765
|
|
| >PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.22 Score=53.06 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=35.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.=+.|.++|..|+..|+.-||+|+|=-.| +.|||.|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 344889999999999999999999995444 469999998764
|
|
| >cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.19 Score=50.11 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=34.3
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+-|..+|..|+..||..||+|++=-.| +.|||.|-.|+.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 4778999999999999999999996444 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.21 Score=51.92 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=33.5
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|.++|..|+..||+.||+|+|=-.| ++|||.|=.|+
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l 78 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENL 78 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCccc
Confidence 3778999999999999999999995334 47999998876
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family. |
| >cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.21 Score=52.41 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=35.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.-+.|.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 445788999999999999999999995433 369999998873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP |
| >cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.23 Score=51.05 Aligned_cols=48 Identities=17% Similarity=0.243 Sum_probs=38.3
Q ss_pred cccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 127 YL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
|+.+.-+.=+-|..+|..|+..|+..||+|++=-.| +.|||+|=.|+.
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~ 59 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLR 59 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeE
Confidence 444444555889999999999999999999995333 479999988874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism. |
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.51 E-value=0.49 Score=52.28 Aligned_cols=80 Identities=23% Similarity=0.348 Sum_probs=57.7
Q ss_pred CCCCCCCceeEEEEe-ccCCCceeeecccCCCCCCCccccEEEEe---eecCC-ceEEEEEEEecCCCCCCcceEEEEEe
Q 008582 454 DAYSPPDFYARVGIA-GVPADTVMKKTKTLEDNWIPSWNEEFEFP---LSVPE-LALLRIEVHEYDMSEKDDFGGQTCLP 528 (561)
Q Consensus 454 ~~~~~~DpyV~V~l~-g~p~d~~k~kTkvi~nn~nP~WNE~f~F~---v~~pe-la~Lrf~V~D~d~~~~dd~iGq~~lp 528 (561)
+.++.+|||.++.-. +......-.+|.+++|++||.|-+. ... +...+ -..+.+.++|++..+++++||++..+
T Consensus 152 d~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~-~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt 230 (529)
T KOG1327|consen 152 DFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPF-SISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT 230 (529)
T ss_pred cccccCCcceEEEEecCCCceeeccccceeccCCCCccccc-ccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence 557788999876543 2222233568999999999999653 222 21222 35688999999988888999999999
Q ss_pred CcccCC
Q 008582 529 VSELKQ 534 (561)
Q Consensus 529 L~~L~~ 534 (561)
+..++.
T Consensus 231 ~~~~~~ 236 (529)
T KOG1327|consen 231 LSELQE 236 (529)
T ss_pred HHHhcc
Confidence 999874
|
|
| >cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.21 Score=50.67 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=34.2
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+-|..+|..|+..||..||+|+|=-.| +.|||.|-.++
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 44778999999999999999999995444 46999998876
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G |
| >cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins | Back alignment and domain information |
|---|
Probab=90.96 E-value=0.23 Score=51.65 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+.|..+|..|+..|+..||+|++=-.| +.+||.|-.+|.
T Consensus 14 PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~ 53 (302)
T cd08571 14 PDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLD 53 (302)
T ss_pred CcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhc
Confidence 4778999999999999999999995444 469999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv |
| >cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5 | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.25 Score=50.64 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=33.2
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
+-+..++..|+..||..||+|+|=-.| +.|||+|=.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999995434 46999999888
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs. |
| >cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins | Back alignment and domain information |
|---|
Probab=90.77 E-value=0.25 Score=51.26 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.=+.|..+|..|+..||..||+|++=-.| +.|||.|-.+|-
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 34788999999999999999999995444 469999987763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI), |
| >cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.29 Score=51.31 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=38.6
Q ss_pred cccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 123 SHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.|.-| .-..-+.|..+|..|+..||..||+|++=-.| +.|||.|-.|+.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 66653 22335888999999999999999999996444 479999988764
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia |
| >cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins | Back alignment and domain information |
|---|
Probab=90.30 E-value=0.28 Score=50.42 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.1
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+-+..+|..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999995433 479999998875
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp |
| >cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins | Back alignment and domain information |
|---|
Probab=89.80 E-value=0.47 Score=47.26 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.-+.|.++|..|+..|++.||+|++=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 45789999999999999999999994333 469999988764
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip |
| >cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 | Back alignment and domain information |
|---|
Probab=89.76 E-value=0.95 Score=38.09 Aligned_cols=62 Identities=18% Similarity=0.302 Sum_probs=47.1
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCC----HHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKAS----KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~----~~l~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|.+|+.. ..|+.++|+..|...-++ ..+ .+++..++..+.. .+.+.++++.|..++.
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~------d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT------NQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 477899999943 689999999999854443 244 7888888887641 1346799999998876
|
Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth. |
| >cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins | Back alignment and domain information |
|---|
Probab=89.75 E-value=0.35 Score=50.53 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=35.5
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.-+.|.++|..|+..||..||+|++=-.| +.|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~ 53 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELS 53 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCccc
Confidence 445889999999999999999999995444 479999998864
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively. |
| >cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins | Back alignment and domain information |
|---|
Probab=89.72 E-value=2.6 Score=41.08 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=50.8
Q ss_pred eeeecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCCCC-C---CcceEEEEEeCc-----ccCCCceEEEcc
Q 008582 475 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-K---DDFGGQTCLPVS-----ELKQGIRAVPLH 542 (561)
Q Consensus 475 ~k~kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~~~-~---dd~iGq~~lpL~-----~L~~GyR~ipL~ 542 (561)
...+|-+..-+-+|.|+|++...+... +.+.|+|.+++..... + ...+|-+.+||- .|+.|-+.++++
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 356777777778999999998887543 4578999998754221 1 247899999984 388999888886
|
Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=89.71 E-value=0.32 Score=48.99 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=34.7
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.-+-|.+++..|+..|+..||+||.=-.| +.|||.|=.|+.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 44778999999999999999999995444 469999988874
|
|
| >cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=89.59 E-value=1.5 Score=37.39 Aligned_cols=63 Identities=13% Similarity=0.335 Sum_probs=46.5
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
-|..+|.+||++ ..|+..+|+..|+.+=.. ...+++.+..|+..... .+.+.++|..|..++.
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~------n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD------CRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 467899999977 899999999999765431 12356777888776542 2346799999998875
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional | Back alignment and domain information |
|---|
Probab=89.58 E-value=3.4 Score=44.15 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=68.5
Q ss_pred HHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHHHHHHHHhhhcccc--CCCceEEEeccC---CCHHHHHHH
Q 008582 142 IIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA--SEYPVVITLEDH---LTPDLQAKV 215 (561)
Q Consensus 142 Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~--S~yPvIlSlE~H---cs~~qQ~~m 215 (561)
...=|..|.|-+.|=|=-.+ +.++-.+.||.- .++|.||++.|+++.=.. ..=-|||.+-.. -....|.+.
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 44557889999888774322 224456667652 478999999999854321 234577777542 234555566
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCChhhcc-----CcEEEecCCC
Q 008582 216 AEMVTQTLGEILFTPGSECLKEFPSPESLK-----RRIIISTKPP 255 (561)
Q Consensus 216 a~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 255 (561)
.+.|+. |||+|. |+.... . -+.++|- .+|+|-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 666766 999987 433322 2 3788887 6788887543
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=89.54 E-value=1.6 Score=37.15 Aligned_cols=63 Identities=13% Similarity=0.266 Sum_probs=46.9
Q ss_pred HHHHHHHHhhC--C-C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE--N-G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~--~-~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
++..+|+.|.. + + .|+.++|+..|..+.++ ...+.+.+.+|++.+-. -+.+.++++.|..+|.
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~------n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS------NKDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC------CCCCCCCHHHHHHHHH
Confidence 57778999993 3 4 59999999999876432 12366789999988751 1346799999999875
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins | Back alignment and domain information |
|---|
Probab=89.42 E-value=1.3 Score=42.92 Aligned_cols=68 Identities=22% Similarity=0.383 Sum_probs=47.2
Q ss_pred eeeecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCCCCC--CcceEEEEEeCcc-----cCCCceEEEcc
Q 008582 475 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK--DDFGGQTCLPVSE-----LKQGIRAVPLH 542 (561)
Q Consensus 475 ~k~kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~~~~--dd~iGq~~lpL~~-----L~~GyR~ipL~ 542 (561)
...+|-+..-+-+|.|+|++.+.+... +.+.|+|.+++.....+ ...+|-+.+||-. |+.|.+-+-|+
T Consensus 53 se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S~~~k~~~~pfg~s~lpL~~~~gt~l~Dg~H~L~vy 129 (189)
T cd08695 53 SEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCSTKDKGEKKLFGFSFVPLMREDGTTLPDGSHELYVY 129 (189)
T ss_pred ceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEeeeccCCCCCceEEEEEeecccCCcEEcCCcEEEEEE
Confidence 356788888788999999998887643 45789998887543221 2567777777722 66776666554
|
Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int |
| >smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain | Back alignment and domain information |
|---|
Probab=89.31 E-value=2.3 Score=36.72 Aligned_cols=76 Identities=21% Similarity=0.223 Sum_probs=46.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCce-eeecccCCCCCCCccccEEEEeeec---CCceEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSV---PELALLRI 508 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~-k~kTkvi~nn~nP~WNE~f~F~v~~---pela~Lrf 508 (561)
.+.+.+...++...... .+..+.||++.+......-. ...|+.+.-+..+.|||-+.|.+.. |-.|.|+|
T Consensus 12 ~~~~~~~~~~~~~l~~~------~~~~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~ 85 (100)
T smart00142 12 NLVITIALIHGIPLNWS------RDYSDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCI 85 (100)
T ss_pred ceEEEEEEeeCCCcccc------cCcceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEE
Confidence 35566666666543211 11146799998864221111 2245444333458999999998764 44589999
Q ss_pred EEEecC
Q 008582 509 EVHEYD 514 (561)
Q Consensus 509 ~V~D~d 514 (561)
.||+..
T Consensus 86 ~i~~~~ 91 (100)
T smart00142 86 TIYEVK 91 (100)
T ss_pred EEEEee
Confidence 999854
|
Outlier of C2 family. |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=89.17 E-value=1.2 Score=37.67 Aligned_cols=63 Identities=10% Similarity=0.222 Sum_probs=45.8
Q ss_pred HHHHHHHHhhC--C--CCcCHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE--N--GTMTVDHLHRFLIEVQK---EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~--~--~~l~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
-|..+|.+|+. + ..|+.++|+.||..+-. ....+...+.+++..+.. -+.+.++++.|..+|.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~------d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL------NSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 46788999883 2 38999999999998731 112356778888886541 1346799999998875
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=88.80 E-value=1.4 Score=37.32 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=48.7
Q ss_pred HHHHHHHHhhC-C--CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE-N--GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~-~--~~l~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|..|.. + ++|+..+|+..|..+=++ .++. +++..+|..... -..+.++++.|..+|.
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~------d~DG~I~F~EF~~l~~ 74 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV------NQDSKLSFEEFWELIG 74 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHH
Confidence 57889999987 4 899999999999975344 3566 789999887541 2346799999998876
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=88.60 E-value=0.54 Score=46.92 Aligned_cols=39 Identities=23% Similarity=0.134 Sum_probs=33.5
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|..++..|+..|++-||+|++=-.| +.+||.|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcC
Confidence 4778999999999999999999995444 47999998876
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=88.33 E-value=0.92 Score=33.99 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=40.0
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 38 GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 38 ~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+.|+.++|+.+| ..++....+.+++..|+..+... +.+.++++.|..+|.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHH
Confidence 568999999999 66666437899999999988632 346799999999874
|
... |
| >cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins | Back alignment and domain information |
|---|
Probab=88.05 E-value=1.8 Score=41.33 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=49.2
Q ss_pred ecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCCC-----CCCcceEEEEEeCcc-----cCCCceEEEccCC
Q 008582 478 KTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMS-----EKDDFGGQTCLPVSE-----LKQGIRAVPLHDR 544 (561)
Q Consensus 478 kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~~-----~~dd~iGq~~lpL~~-----L~~GyR~ipL~d~ 544 (561)
-|.++..+-+|.|+|+|...+... +...|.|.+++-+.. .....+|-+.+||-. ++.|...+|++-.
T Consensus 55 ~~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k~ 133 (178)
T cd08679 55 YTSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYKY 133 (178)
T ss_pred EEEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEec
Confidence 344444448899999998887532 457899999986532 225689999999987 7888888888643
|
Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo |
| >cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins | Back alignment and domain information |
|---|
Probab=88.01 E-value=0.59 Score=48.60 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=35.4
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.-+.|..+|..|+..||..||+|++=-.| +.|||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 445889999999999999999999995444 469999988763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP |
| >PF15627 CEP76-C2: CEP76 C2 domain | Back alignment and domain information |
|---|
Probab=87.94 E-value=8.5 Score=36.15 Aligned_cols=125 Identities=20% Similarity=0.200 Sum_probs=81.8
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC------
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE------ 502 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe------ 502 (561)
|.+.-|.++|+.|.-...... +.-+.++.-+.+.++- ..++++|+.+....+|.|+|.|-|++....
T Consensus 6 ~~~~yL~l~vlgGkAFld~l~----~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~ 78 (156)
T PF15627_consen 6 PGRRYLHLRVLGGKAFLDHLQ----EPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGST 78 (156)
T ss_pred CCceEEEEEEeCchhHhhhhh----ccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccc
Confidence 456789999998874421100 0002233444455542 136889999999999999999999986432
Q ss_pred ---c----eEEEEEEEecCCCCCCcceEEEEEeCcc-cCCCce----EEEccCCCCC-cccCeEEEEEEEE
Q 008582 503 ---L----ALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGIR----AVPLHDRKGE-RYKSVKLLMHFEF 560 (561)
Q Consensus 503 ---l----a~Lrf~V~D~d~~~~dd~iGq~~lpL~~-L~~GyR----~ipL~d~~G~-~~~~atLlv~~~f 560 (561)
+ .-|.+.|--.|..+...++|...+.-.. |..|+. .|.|....++ ..+-+.|-+++++
T Consensus 79 ~~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lEL 149 (156)
T PF15627_consen 79 ATTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLEL 149 (156)
T ss_pred hhHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEe
Confidence 1 2466777666666666899998887654 567774 4677765555 3445678888875
|
|
| >PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen [] | Back alignment and domain information |
|---|
Probab=87.85 E-value=13 Score=33.69 Aligned_cols=114 Identities=19% Similarity=0.173 Sum_probs=68.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeec---C-----C
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSV---P-----E 502 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~---p-----e 502 (561)
-.+.|+|....+++. .+..|.|.............|..... +..-.|||+|.+.+.. . +
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~ 74 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ 74 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence 356777777777652 12234444443211111234443332 3557899999988652 1 1
Q ss_pred ceEEEEEEEecCCCCCCcceEEEEEeCcccCCC-----ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 503 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 503 la~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G-----yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
--.+.|.|+.....++...+|.+.+.|.....- .+.++|... +-.+|+|.|.|.+
T Consensus 75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~ 134 (143)
T PF10358_consen 75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL 134 (143)
T ss_pred eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence 246889998874334336999999999987552 245566655 4557888888875
|
Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1). |
| >PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A | Back alignment and domain information |
|---|
Probab=87.57 E-value=1.8 Score=41.51 Aligned_cols=67 Identities=18% Similarity=0.214 Sum_probs=39.0
Q ss_pred eeecccCCCCCCCccccEEEEeeec--CCceEEEEEEEecCCCCCC---cceEEEEEeCcc----cCCCceEEEcc
Q 008582 476 MKKTKTLEDNWIPSWNEEFEFPLSV--PELALLRIEVHEYDMSEKD---DFGGQTCLPVSE----LKQGIRAVPLH 542 (561)
Q Consensus 476 k~kTkvi~nn~nP~WNE~f~F~v~~--pela~Lrf~V~D~d~~~~d---d~iGq~~lpL~~----L~~GyR~ipL~ 542 (561)
...|.+...+-+|.|+|+|.+++.. .+...|.|.+++.....+. ..+|.+.+||-. +..|-..+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 3467777777899999999988764 3457899999986532211 588888888864 44566677775
|
|
| >cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins | Back alignment and domain information |
|---|
Probab=87.54 E-value=0.67 Score=48.01 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=35.1
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
..-+.|..+|..|+..||.-||+||+=-.| +.|||+|=.++.
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~ 60 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTIS 60 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCcce
Confidence 345789999999999999999999995444 479999988763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins | Back alignment and domain information |
|---|
Probab=86.61 E-value=0.79 Score=48.07 Aligned_cols=42 Identities=17% Similarity=0.217 Sum_probs=35.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
..-+-|..+|..|+..||.-||+|++=-.| +.|||.|=.|+.
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~ 75 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLK 75 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCccc
Confidence 445788999999999999999999995444 469999988874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation. |
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=86.01 E-value=0.51 Score=55.12 Aligned_cols=84 Identities=20% Similarity=0.296 Sum_probs=60.8
Q ss_pred CCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eec--------CCceEEEEEEEecCCCCCCcceEEE
Q 008582 455 AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSV--------PELALLRIEVHEYDMSEKDDFGGQT 525 (561)
Q Consensus 455 ~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~--------pela~Lrf~V~D~d~~~~dd~iGq~ 525 (561)
..+-.|||+.|...+ ..+.|-++.+++||.|+.+..|. +.. ...-.+.|.|+|.|..+.++|.|..
T Consensus 223 k~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~ppi~v~e~yd~dr~g~~ef~gr~ 297 (1105)
T KOG1326|consen 223 KDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPPIRVFEVYDLDRSGINEFKGRK 297 (1105)
T ss_pred cccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCCeEEEEeehhhhhchHHhhccc
Confidence 345678999998876 45679999999999999998885 221 1123678999999999999999986
Q ss_pred EEeC-cccCCC-ceEEEccC
Q 008582 526 CLPV-SELKQG-IRAVPLHD 543 (561)
Q Consensus 526 ~lpL-~~L~~G-yR~ipL~d 543 (561)
.... --+.+| ..+.|+..
T Consensus 298 ~~~p~V~~~~p~lkw~p~~r 317 (1105)
T KOG1326|consen 298 KQRPYVMVQCPALKWVPTMR 317 (1105)
T ss_pred ccceEEEecCCccceEEeec
Confidence 5433 333333 45667653
|
|
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=85.18 E-value=2.9 Score=35.24 Aligned_cols=64 Identities=13% Similarity=0.239 Sum_probs=48.0
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~~--~-~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|.++|..|. .+ + .|+.++|+..|+..-+.. ..+.+++.+|+..+.. -+.+.++++.|..++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~------d~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDE------NGDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCC------CCCCcCcHHHHHHHHH
Confidence 46888999996 43 6 499999999998643331 2477889999998752 1246799999998876
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=83.19 E-value=5.1 Score=29.31 Aligned_cols=59 Identities=20% Similarity=0.438 Sum_probs=44.5
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 27 i~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
+..+|..|-.+ +.|+.++|...++... . ..+.+.+..++.++... +.+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHh
Confidence 56788888654 7899999999998653 3 35777888888887521 23569999998876
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=82.74 E-value=1.2 Score=44.59 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=32.5
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+-|..+|..|+..|+ -||+|++=-.| +.|||.|=.|+.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 3678899999999999 89999996444 479999987763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=82.73 E-value=1.4 Score=44.22 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=31.8
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCC
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 172 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~ 172 (561)
+-|.++|..|+..|+.+||+|+.=-.| +.+||.|=+
T Consensus 20 ENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~ 55 (257)
T COG0584 20 ENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDE 55 (257)
T ss_pred cchHHHHHHHHHcCCCEEEeeccCccC-CcEEEeccc
Confidence 778999999999999999999996544 479999977
|
|
| >cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4 | Back alignment and domain information |
|---|
Probab=82.65 E-value=1.3 Score=46.16 Aligned_cols=39 Identities=26% Similarity=0.461 Sum_probs=33.7
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+-+.++|..|+..|+..||+|++--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 677899999999999999999996444 469999988873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet. |
| >cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins | Back alignment and domain information |
|---|
Probab=82.23 E-value=1.8 Score=45.01 Aligned_cols=38 Identities=5% Similarity=-0.087 Sum_probs=31.7
Q ss_pred CChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 137 CSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 137 Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
++...++.|...|++-||+|++=-.| +.|||+|-+++.
T Consensus 16 ~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~ 53 (300)
T cd08578 16 KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVP 53 (300)
T ss_pred CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceE
Confidence 46789999999999999999994333 369999998874
|
This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=82.09 E-value=5.7 Score=33.70 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=46.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..+-.+ +.|+.++|..+|+.. ..+.+++..|+..+.. ...+.++++.|..+|.
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~------~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADI------DNDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcC------CCCCCcCHHHHHHHHH
Confidence 35677788888643 899999999999872 3577888888887652 1246799999998876
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins | Back alignment and domain information |
|---|
Probab=81.93 E-value=1.6 Score=46.66 Aligned_cols=38 Identities=13% Similarity=0.122 Sum_probs=32.4
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCC
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 172 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~ 172 (561)
.-+-|.++|..|+..|+.-||+|++=-.| +.|||.|=.
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~ 66 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQ 66 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCC
Confidence 34778999999999999999999995444 469999985
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins | Back alignment and domain information |
|---|
Probab=81.32 E-value=1.7 Score=46.20 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.-+-+..+|..|+..||.-||+|++=-.| +.|||.|=.|+.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34778999999999999999999995434 469999988763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti |
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=80.08 E-value=7.5 Score=32.73 Aligned_cols=63 Identities=16% Similarity=0.311 Sum_probs=46.7
Q ss_pred HHHHHHHHhh-C-C-C-CcCHHHHHHHHHHHc---CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYS-E-N-G-TMTVDHLHRFLIEVQ---KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~-~-~-~-~l~~~~~~~Fl~~~Q---~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+|..+|..|. . + + .|+.++|+..|+.+= .....+.+++.++|..... -+.+.++++.|..++.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~------n~dG~v~f~eF~~li~ 78 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS------DGDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 6888999997 3 3 6 599999999998611 1123578889999987642 1346799999998875
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain [] | Back alignment and domain information |
|---|
Probab=80.07 E-value=2.2 Score=31.30 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=23.0
Q ss_pred HHHHHHHHhh---CC-CCcCHHHHHHHHHHH
Q 008582 26 AVKSMFDQYS---EN-GTMTVDHLHRFLIEV 52 (561)
Q Consensus 26 ei~~if~~~~---~~-~~l~~~~~~~Fl~~~ 52 (561)
-|..+|.+|| ++ ..|++.+|+..|+++
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4778999999 34 899999999999865
|
S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 561 | ||||
| 2fju_B | 799 | Activated Rac1 Bound To Its Effector Phospholipase | 7e-40 | ||
| 1qas_A | 622 | 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodies | 2e-26 | ||
| 1djg_A | 624 | Phosphoinositide-Specific Phospholipase C-Delta1 Fr | 2e-26 | ||
| 4gnk_B | 1235 | Crystal Structure Of Galphaq In Complex With Full-l | 6e-21 | ||
| 4gnk_B | 1235 | Crystal Structure Of Galphaq In Complex With Full-l | 2e-15 | ||
| 3ohm_B | 885 | Crystal Structure Of Activated G Alpha Q Bound To I | 9e-21 | ||
| 3ohm_B | 885 | Crystal Structure Of Activated G Alpha Q Bound To I | 2e-15 | ||
| 3qr0_A | 816 | Crystal Structure Of S. Officinalis Plc21 Length = | 2e-16 | ||
| 3qr0_A | 816 | Crystal Structure Of S. Officinalis Plc21 Length = | 5e-16 | ||
| 3qr1_A | 813 | Crystal Structure Of L. Pealei Plc21 Length = 813 | 6e-16 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 1e-04 | ||
| 4dnl_A | 140 | Crystal Structure Of A C2 Domain Of A Protein Kinas | 2e-04 | ||
| 1a25_A | 149 | C2 Domain From Protein Kinase C (Beta) Length = 149 | 2e-04 | ||
| 1dsy_A | 139 | C2 Domain From Protein Kinase C (Alpha) Complexed W | 2e-04 | ||
| 3gpe_A | 137 | Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain | 2e-04 | ||
| 2uzp_A | 144 | Crystal Structure Of The C2 Domain Of Human Protein | 7e-04 |
| >pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta 2 Length = 799 | Back alignment and structure |
|
| >pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase Delta 1 Length = 622 | Back alignment and structure |
|
| >pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat Complexed With Lanthanum Length = 624 | Back alignment and structure |
|
| >pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 1235 | Back alignment and structure |
|
| >pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 1235 | Back alignment and structure |
|
| >pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 885 | Back alignment and structure |
|
| >pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 885 | Back alignment and structure |
|
| >pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21 Length = 816 | Back alignment and structure |
|
| >pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21 Length = 816 | Back alignment and structure |
|
| >pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21 Length = 813 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|4DNL|A Chain A, Crystal Structure Of A C2 Domain Of A Protein Kinase C Alpha (Prkca) From Homo Sapiens At 1.90 A Resolution Length = 140 | Back alignment and structure |
|
| >pdb|1A25|A Chain A, C2 Domain From Protein Kinase C (Beta) Length = 149 | Back alignment and structure |
|
| >pdb|1DSY|A Chain A, C2 Domain From Protein Kinase C (Alpha) Complexed With Ca2+ And Phosphatidylserine Length = 139 | Back alignment and structure |
|
| >pdb|3GPE|A Chain A, Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain Complexed With Ca2+ And Ptdins(4,5)p2 Length = 137 | Back alignment and structure |
|
| >pdb|2UZP|A Chain A, Crystal Structure Of The C2 Domain Of Human Protein Kinase C Gamma. Length = 144 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 561 | |||
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 1e-136 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 1e-119 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 1e-118 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 1e-114 | |
| 3h4x_A | 339 | Phosphatidylinositol-specific phospholipase C1; PI | 3e-19 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 9e-12 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 1e-11 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 3e-10 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 6e-10 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 6e-10 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 9e-09 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 1e-08 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 2e-08 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 5e-08 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 6e-08 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 6e-08 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 8e-08 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 8e-08 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 1e-07 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 5e-06 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 1e-07 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 2e-07 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 6e-07 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 3e-07 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 4e-07 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 6e-07 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 6e-07 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 1e-06 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 1e-06 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 1e-06 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 2e-06 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 2e-06 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 2e-06 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 2e-06 | |
| 1cjy_A | 749 | CPLA2, protein (cytosolic phospholipase A2); lipid | 3e-06 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 4e-06 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 4e-06 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 6e-06 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 8e-06 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 1e-05 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 2e-05 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 2e-05 | |
| 3nsj_A | 540 | Perforin-1; pore forming protein, immune system; H | 3e-05 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 4e-05 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 5e-05 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 5e-05 | |
| 3bxj_A | 483 | RAS GTPase-activating protein syngap; GTPase activ | 3e-04 |
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 409 bits (1052), Expect = e-136
Identities = 161/567 (28%), Positives = 243/567 (42%), Gaps = 59/567 (10%)
Query: 27 VKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ F++ + + T++V+ L FL Q+E++A A ++I+ +R +
Sbjct: 82 IDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYE--PSETAKAQRQMT 139
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR 144
+ F YL S V+ DM P+SHY + + HN+YL +QL S IR
Sbjct: 140 KDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIR 199
Query: 145 ALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLE 204
AL KG R +ELD W ++ + HG T T+ + LR+I++YAF AS YPV+++LE
Sbjct: 200 ALCKGCRCLELDCWDGPNQEPIIY-HGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLE 258
Query: 205 DHLTPDLQAKVAEMVTQTLGEILFT-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE 263
+H + + Q +A + LG IL P PSPE LK +I++ K L A
Sbjct: 259 NHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGG 318
Query: 264 EKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEA 323
E E + A E + + + +
Sbjct: 319 ENGSEATDVSDEVEAAEMEDEAV---------------------RSQVQHKPKEDKLKLV 357
Query: 324 PEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLR 383
PE +I GG S SE + + GN VR L R
Sbjct: 358 PELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSR 417
Query: 384 IYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH------------------------- 418
IYP G R DSSNY+P+ W+ G Q+VA N QT
Sbjct: 418 IYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLR 477
Query: 419 --NEVFDPKVK--LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT 474
N F+ + P + ++ V + G P + + S D V I GV DT
Sbjct: 478 DPNTTFNSRALTQGPWWRPERLRVRIISGQ--QLPKVNKNKNSIVDPKVIVEIHGVGRDT 535
Query: 475 VMKKTKTLEDNWI-PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 533
++T + +N P W+ EFEF ++VP+LAL+R V +YD S K+DF GQ+ +P + LK
Sbjct: 536 GSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLK 595
Query: 534 QGIRAVPLHDRKGERYKSVKLLMHFEF 560
QG R V L + G+++ S L +
Sbjct: 596 QGYRHVHLLSKNGDQHPSATLFVKISI 622
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 | Back alignment and structure |
|---|
Score = 368 bits (946), Expect = e-119
Identities = 146/616 (23%), Positives = 242/616 (39%), Gaps = 70/616 (11%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT--MTVDHLHRFLIEVQKED-- 56
+ + F ++ P+ + +F Y MT +HL +F+ + Q++
Sbjct: 196 DAINPEDFPEPVYKSFLMSLCPRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRL 254
Query: 57 ------KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHH 109
A + Q +ID QR L+ E +L G N L+ + +HH
Sbjct: 255 NSLLFPPARPDQVQGLIDKYE--PSGINAQRGQLSPEGMVWFLCGPENSVLAQDKLLLHH 312
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DMT P++HYFI + HN+YLT Q + S + L G R +ELD W D ++
Sbjct: 313 DMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPII 372
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + + +I E AF S YP++++ E+H+ +P QAK+AE G++L
Sbjct: 373 THGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDML 432
Query: 228 FTPGSECLK-----EFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEA 282
T E PSPE L+ +I+I K + K+ +++ +
Sbjct: 433 LTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAV 492
Query: 283 WGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIA-----IHAGKP 337
W E ++++ + G ++EE +S A ++ +P
Sbjct: 493 WAGEEGTELE-EEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQP 551
Query: 338 KGGLKECLKVDPDKVRRL-SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 396
+ ++ + S +E + + + V + +R + RIYPKG R+DSSNY
Sbjct: 552 TKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNY 611
Query: 397 NPLIGWSHGAQMVAFNMQTG---------------------------PHNEVFDPKVKLP 429
P + W+ G QMVA N QT ++ F+P
Sbjct: 612 MPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPDKQFNPFSVDR 671
Query: 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKT---LEDNW 486
+ T F + Y V + G+P D + ++
Sbjct: 672 IDVVVATT------LSITVISGQFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSI 725
Query: 487 IPSWNEE-FEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 544
P W EE F F + +PELA LR+ V E + F G +P++ L G + LH
Sbjct: 726 NPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSE 781
Query: 545 KGERYKSVKLLMHFEF 560
L + E
Sbjct: 782 SNMPLTMPALFIFLEM 797
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 | Back alignment and structure |
|---|
Score = 368 bits (946), Expect = e-118
Identities = 135/606 (22%), Positives = 232/606 (38%), Gaps = 90/606 (14%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKAS- 59
+ F +F++A E + ++ +F + S+N +T FL ++Q+
Sbjct: 207 AIDLKAFDFDTFFKFYLALLERSE-IEGIFKELSKNKGNITTVMFRDFLNDMQRHPSLHK 265
Query: 60 -------KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDM 111
+A+I+ + ++ L E +L + N + + +M
Sbjct: 266 TLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCEENNLTPMHRLDLGANM 325
Query: 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 171
++ Y+I + HN+YLTG+QL S + L G R +ELD W + + + HG
Sbjct: 326 KLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPI-ITHG 384
Query: 172 GTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG 231
TM V + +I E AF S+YPV+++ E+H + Q +A+ + GE+L
Sbjct: 385 FTMCTEVLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKP 444
Query: 232 SECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKE 286
+ P+P L+++I+I K + EE D
Sbjct: 445 IDGHPLKPGVPLPTPYDLRKKILIKNKKMHKGTGDDEELAGLTD---------------- 488
Query: 287 VPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346
++ ++ + A E L+ ++ K
Sbjct: 489 --------------EEKKKIEKEKKDAGTAAKEAEAAEEMSALVNYIQPVHFTTFEQAQK 534
Query: 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406
D S+ E Q N + D V + ++ + RIYPKG RVDSSNY P I W+ G
Sbjct: 535 KDRHYEMS-SMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGC 593
Query: 407 QMVAFNMQTG---------------------------PHNEVFDPKVKLPAKKTLKVTVY 439
Q+VA N Q ++ FDP + + T+
Sbjct: 594 QLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLDKRFDPFTESTVDGVVAGTIE 653
Query: 440 MGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK--KTKTLEDNWI-PSWNEEFEF 496
+ F + Y V + G+P DTV K KTK +E+N + P ++E+
Sbjct: 654 I------KIISAQFLSDKQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFV 707
Query: 497 --PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKL 554
+ +P+LA++RI V E + F G +P+ +K G R VPL + +
Sbjct: 708 FKKVVLPDLAVVRIIVSEEN----GKFIGHRVMPLDGIKPGYRHVPLRNESNRPLGLASV 763
Query: 555 LMHFEF 560
H
Sbjct: 764 FAHIVA 769
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 | Back alignment and structure |
|---|
Score = 358 bits (918), Expect = e-114
Identities = 155/655 (23%), Positives = 246/655 (37%), Gaps = 108/655 (16%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKAS- 59
S + RF PD K + + ++ +T++ L F+ + Q++ + +
Sbjct: 201 SIRPDEFSLEIFERFLNKLCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNE 260
Query: 60 -------KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHDM 111
A+ +I+ + +R +++E F +YL G+ N L + DM
Sbjct: 261 VLYPPLRPSQARLLIEKYEPNQQF--LERDQMSMEGFSRYLGGEENGILPLEALDLSTDM 318
Query: 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV-LH 170
T P+S YFI + HN+YLT QL S +AL G R +ELD+W + H
Sbjct: 319 TQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITH 378
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFT 229
G TMT V L L +I E AF S YPV+++ E+H+ + QAK+AE G+ L
Sbjct: 379 GFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLI 438
Query: 230 PGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWG 284
+ PSP+ L RI++ K + SA E+
Sbjct: 439 EPLDKYPLAPGVPLPSPQDLMGRILVKNKKRHRPSAGGPDSAGRKRPLEQSNSALSESSA 498
Query: 285 KEVPNLKSLNNSACD-------------------------------------KDDFDGGV 307
P+ L + + D D +
Sbjct: 499 ATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKSLGDEGLNRGPYVLGPADREDEE 558
Query: 308 DNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL-----------KECLKVDPDKVRRLS 356
+++EE+ + E ++A + L E + S
Sbjct: 559 EDEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSS 618
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTG 416
E + + + V + ++ L RIYPKG RVDSSNY P + W+ G Q+VA N QT
Sbjct: 619 FVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTL 678
Query: 417 P---------------------------HNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 449
++ FDP ++ +
Sbjct: 679 DVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIVANA------LRVKVI 732
Query: 450 HTHFDAYSPPDFYARVGIAGVPADTVMK-KTKTLEDN-WIPSWNEE-FEFP-LSVPELAL 505
F + Y V + G+P DT K +T+T + N + P W+EE F+FP + +P LA
Sbjct: 733 SGQFLSDRKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLAS 792
Query: 506 LRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560
LRI E F G LPVS ++ G V L + + LL++ E
Sbjct: 793 LRIAAFEEG----GKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPALLIYTEA 843
|
| >3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A Length = 339 | Back alignment and structure |
|---|
Score = 88.4 bits (218), Expect = 3e-19
Identities = 36/227 (15%), Positives = 64/227 (28%), Gaps = 49/227 (21%)
Query: 98 NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI 157
+ L P HN+Y AL G ++ELD+
Sbjct: 11 SSGLVPRGSHMEPAATTYGTSTSVGVHNAY-------EKEKYRYFADALDSGAALLELDL 63
Query: 158 WPNSKKDNVDVLHG------------------GTMTAPVELIKCLRSIKEY-AFVASEYP 198
W N+ + V H T + + CL ++ + P
Sbjct: 64 WSNALGRSWRVSHSNPLGNNSNCEGAANASELRTKSRDQDFAGCLSDMRAWHDAHPGHRP 123
Query: 199 VVITLE--DHLTPDLQAKVAE---MVTQTLGEILFTPGSECLKE-----------FPSPE 242
+++ +E D AE ++ Q LG+ ++ PG +PS
Sbjct: 124 ILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEAVRAGGWPSRA 183
Query: 243 SLKRRII-------ISTKPPKEYLEAKEEKEKENDSQRGKGSADEEA 282
L + + + K P + L E +G +
Sbjct: 184 DLAGKFLFELIPGTVEEKNPFDKLWTDVEYAGHLKDLAAQGKLAQST 230
|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 9e-12
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513
D PD Y + I+ P K+T+ ++ P WNE FEF L + +L I + +
Sbjct: 22 DMLDTPDPYVELFISTTPDSR--KRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 79
Query: 514 DMSEKDDFGGQTCLPVSELKQG 535
+ D+ G VS +K G
Sbjct: 80 NYV-MDETLGTATFTVSSMKVG 100
|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 1e-11
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536
+T T+ N P WN+ F FP+ +L + V + D + DF G+ +P+ ++ G
Sbjct: 47 LQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ 105
Query: 537 -RAVPLHDRKGERYKSVKLLMHFEFI 561
L ++ E+ + + + I
Sbjct: 106 PNCYVLKNKDLEQAFKGVIYLEMDLI 131
|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 140 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 3e-10
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSELK 533
KKTK +++ P WNE EF L L L I V +++ ++ G + + +L
Sbjct: 40 KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLT 99
Query: 534 QG------IRAVPLHDRKGE 547
+ + L + KG+
Sbjct: 100 GDQSRSLPYKLISLLNEKGQ 119
|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Length = 157 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 6e-10
Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 10/116 (8%)
Query: 433 TLKVTVYMGEG----WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 488
L+V + G + + D Y V + + +T T + P
Sbjct: 30 YLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD----QVRVGQTSTKQKTNKP 85
Query: 489 SWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 544
++NEEF V + L + V D F L EL + A +
Sbjct: 86 TYNEEFCAN--VTDGGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEG 139
|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 6e-10
Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 11/108 (10%)
Query: 433 TLKVTVYMGEG-----WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 487
LK+ + W D Y + + D+ + +T T +
Sbjct: 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD----DSRIGQTATKQKTNS 62
Query: 488 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 535
P+W++EF V + + V DDF + EL Q
Sbjct: 63 PAWHDEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQN 108
|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Length = 153 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 9e-09
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 462 YARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDD 520
Y RV + + +TKT++ + P WNEE F + P+ L EV + + +DD
Sbjct: 44 YVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH-PQQHRLLFEVFDENRLTRDD 102
Query: 521 FGGQTCLPVSELKQG 535
F GQ +P+ L
Sbjct: 103 FLGQVDVPLYPLPTE 117
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Length = 173 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 1e-08
Identities = 21/111 (18%), Positives = 34/111 (30%), Gaps = 13/111 (11%)
Query: 422 FDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKT 481
L K L++TV + + P Y V + G KKT+
Sbjct: 26 LGSMGSLTMKSQLQITVISAKLKENK------KNWFGPSPYVEVTVDGQS-----KKTEK 74
Query: 482 LEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
+ P W + V ++ L V + + D G L + E
Sbjct: 75 CNNTNSPKWKQPLTVI--VTPVSKLHFRVWSHQTLKSDVLLGTAALDIYET 123
|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 2e-08
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 462 YARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDD 520
Y RV + + + +TKT++ + P WNEE F + P+ + EV + + +DD
Sbjct: 32 YVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQRHRILFEVFDENRLTRDD 90
Query: 521 FGGQTCLPVSELKQG 535
F GQ +P+ L
Sbjct: 91 FLGQVDVPLYPLPTE 105
|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Length = 136 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-08
Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 14/129 (10%)
Query: 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 492
TL+V + + F P Y ++ + + + P WNE
Sbjct: 11 TLEVVLVSAK----GLEDADFLNNMDP--YVQLTCRTQDQKSNVAEGMGTT----PEWNE 60
Query: 493 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL--KQGIRAVPLHDRKGERYK 550
F F +S L+ ++ + D+ +DD G+ +P+ + + I + K E YK
Sbjct: 61 TFIFTVSEGT-TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYK 119
Query: 551 -SVKLLMHF 558
+ + + F
Sbjct: 120 GEIWVALSF 128
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 3e-08
Identities = 78/570 (13%), Positives = 159/570 (27%), Gaps = 174/570 (30%)
Query: 36 ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLR------ELKH-------------- 75
E G + ++ ++ V ++ D + + D + E+ H
Sbjct: 10 ETGEH--QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 76 LNIFQRRGLNL-EAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIY-TGHNSYLTGNQL 133
+ + + F + + IN +P + + P +Y + NQ+
Sbjct: 68 FWTLLSKQEEMVQKFVEEVL-RINYKFLMSP-IKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 134 NSDCSDVPIIR---ALQKGVRVIELDIWPNSKKDNVDVLHG--G----TMTAPVELIKCL 184
+ +V ++ L++ + EL P NV ++ G G + V
Sbjct: 126 FAK-YNVSRLQPYLKLRQALL--ELR--PA---KNV-LIDGVLGSGKTWVALDV-----C 171
Query: 185 RSIK-EYAFVASEYPVV-ITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
S K + ++ + + L++ +P+ V EM+ Q L + P+
Sbjct: 172 LSYKVQCKM---DFKIFWLNLKNCNSPET---VLEML-QKL----------LYQIDPNWT 214
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS---ADEEAWGKEVPNLKSLNNSAC- 298
S S+ + E + S+ + + + N S C
Sbjct: 215 SRSDH---SSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-NVQNAKA--WNAFNLS-CK 267
Query: 299 ------DKDDFD--GGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL-KECLKVDP 349
K D D S E + L+ + L +E L +P
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327
Query: 350 DKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMV 409
RRLS+ I + L + W H
Sbjct: 328 ---RRLSI---------------IAESIRDGLATW----------DN-----WKH----- 349
Query: 410 AFNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDF---YARVG 466
V K+ ++ ++ + P ++ + R+
Sbjct: 350 -----------VNCDKL----TTIIESSL---------------NVLEPAEYRKMFDRLS 379
Query: 467 IAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTC 526
+ P T L W ++ + V ++H+Y + EK
Sbjct: 380 V--FPPS-AHIPTILLSLIW---FDVIKSDVMVVVN------KLHKYSLVEKQPKESTIS 427
Query: 527 LP---VSELKQGIRAVPLHDRKGERYKSVK 553
+P + + LH + Y K
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPK 457
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 77/565 (13%), Positives = 143/565 (25%), Gaps = 219/565 (38%)
Query: 4 QTYRVCFCFRR-------RFHVAASEAPD------AVKSMFDQYSENGTMTVDHLHRFLI 50
T R+ + +F V + +K+ Q S M ++ R
Sbjct: 63 GTLRLFWTLLSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121
Query: 51 EVQKEDKAS---KEDAQAIIDSLRELKH----------------L--------------- 76
+ Q K + + + +L EL+ +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD 181
Query: 77 -NIF-------QRRGLNLEAFFKYLFGDINPPL-------SPTPVVHHDMTAPVSHYFIY 121
IF LE K L I+P S + H + A +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQK-LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 122 TGH-NSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+ N L L + + A +++ +T
Sbjct: 241 KPYENCLLV---L-LNVQNAKAWNAFNLSCKIL--------------------LTT---- 272
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDH---LTPD----LQAKVAEMVTQTLGEILFTPGSE 233
R + F+++ I+L+ H LTPD L K + Q L P
Sbjct: 273 ----RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL------PREV 322
Query: 234 C-------------LKEFPS-------------------------PESLKRR---III-- 250
+++ + P ++ + +
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382
Query: 251 -STKPPKEYLE------AKEEKEKENDSQRGKGSADEEAWGKE---------------VP 288
S P L K + + ++ KE +
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK--QPKESTISIPSIYLELKVKLE 440
Query: 289 NLKSLNNSACDKDDFDGGVDNDEE--DSDDK--SQHNEAPEYRKLIAIHAGKPKGGLKEC 344
N +L+ S D + D+D+ D+ H I H LK
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH---------IGHH-------LKNI 484
Query: 345 LKVD-PDKVRRLSLS----EQQLE------NAVGTYGNDIVRFTQRNLLRIYPKGIRVDS 393
+ R + L EQ++ NA G+ N + + L+ Y I +
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ------LKFYKPYICDND 538
Query: 394 SNYNPLIGWSHGAQMVAFNMQTGPH 418
Y L+ ++ F + +
Sbjct: 539 PKYERLVN-----AILDFLPKIEEN 558
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 2e-04
Identities = 33/284 (11%), Positives = 81/284 (28%), Gaps = 85/284 (29%)
Query: 3 KQTYRVCFCFRRRFHVAA-----------SEAPDAV------KSMFDQYSENGTMTVDHL 45
++ + F H+ V S+ ++ + T+++ +
Sbjct: 372 RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431
Query: 46 HRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTP 105
+ ++V+ E++ + ++I+D K F L +Y + I
Sbjct: 432 Y-LELKVKLENEYALH--RSIVDHYNIPKT---FDSDDLIPPYLDQYFYSHI-------- 477
Query: 106 VVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI-WPNSKKD 164
HH R++ LD + K
Sbjct: 478 -GHHLKNIEHPERM----------------------------TLFRMVFLDFRFLEQK-- 506
Query: 165 NVDVLHGGT-MTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTL 223
+ H T A ++ L+ +K Y + ++ + E + +
Sbjct: 507 ---IRHDSTAWNASGSILNTLQQLKFY-------------KPYICDN--DPKYERLVNAI 548
Query: 224 GEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267
+ L + S + RI + + + EA ++ ++
Sbjct: 549 LDFLPKIEENLIC---SKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Length = 149 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 6e-08
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEKDDFGGQTCLPVSELK 533
+KTKT++ + P WNE F F L + L +E+ ++D++ ++DF G +SEL+
Sbjct: 70 QKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQ 127
|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 147 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-08
Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 5/107 (4%)
Query: 429 PAKKTLKVTVYMGEG-WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 487
L V V + + Y ++ + +P K+T
Sbjct: 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICL--LPDQKNSKQTGVKRKTQK 80
Query: 488 PSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
P + E + F + E L + V ++D + G+ +P+ E+
Sbjct: 81 PVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEV 127
|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 8e-08
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
+T + +W E PL+ EL L + + D + G+ L +
Sbjct: 61 AQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGT 118
|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Length = 143 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-08
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
+TK P +NE+F F + EL L + V+++D K D G+ +P++ +
Sbjct: 71 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 128
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 1e-07
Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
Query: 428 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 487
LP L VT+ + D D Y + + +KT ++
Sbjct: 148 LPTAGLLTVTIIKAS----NLKAM--DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLN 201
Query: 488 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
P++NE F ++ + L I V +YD ++ G +
Sbjct: 202 PTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAA 248
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 5e-06
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIEVH 511
D+ D Y ++ + +P +TK P +NE F+F + + ELA L V+
Sbjct: 36 DSNGFSDPYVKIYL--LPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93
Query: 512 EYDMSEKDDFGGQTCLP 528
++D + D GQ L
Sbjct: 94 DFDRFSRHDLIGQVVLD 110
|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Length = 152 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-07
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 534
+TK P +NE+F F + EL L + V+++D K D G+ +P++ +
Sbjct: 79 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF 138
Query: 535 G 535
G
Sbjct: 139 G 139
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 511
D D Y ++ + KKT ++ P +NE F F + ++ + + V
Sbjct: 166 DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVL 225
Query: 512 EYDMSEKDDFGGQTCLPVSELKQGIR 537
+YD K+D G+ + + +R
Sbjct: 226 DYDKIGKNDAIGKVFVGYNSTGAELR 251
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 6e-07
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 460 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSE 517
D Y +V + +P +TK P +NE+F F + ELA L + V+++D
Sbjct: 41 DPYVKVFL--LPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS 98
Query: 518 KDDFGGQTCLPVSELKQG 535
K D G+ +P++ + G
Sbjct: 99 KHDIIGEFKVPMNTVDFG 116
|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-07
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
+KT D P ++E + + LA L+ V + ++ F G+ + +
Sbjct: 63 RKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSW 120
|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} PDB: 3kwt_A* Length = 148 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 4e-07
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK-----------DDFGGQT 525
K+TKT+ N P W E F F +++ V + D K DDF GQT
Sbjct: 51 KRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQT 109
Query: 526 CLPVSELKQGI-RAVPLHDRKGERYKS 551
+ V L + L R + S
Sbjct: 110 IIEVRTLSGEMDVWYNLDKRTDKSAVS 136
|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Length = 166 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 6e-07
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 534
KT+ + P +NEEF + + +LA L I V +YD+ + +D+ G L +S +
Sbjct: 76 HKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGE 135
Query: 535 GIR 537
++
Sbjct: 136 RLK 138
|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Length = 155 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 6e-07
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 453 FDAYSPPDFYARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIE 509
RV + T +T+ L+ + +NE F +S P L LR++
Sbjct: 58 LLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117
Query: 510 VHEYDMSEKDDFGGQTCLPVSEL 532
V D S ++ G + ++E+
Sbjct: 118 VCTTDRSHLEECLGGAQISLAEV 140
|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} Length = 153 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-06
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELAL-LRIEV-HEYDMSEKDDFGGQTCLPVSELKQ 534
+KT+T+ D P+++E F FP+ + L + V + S + G V L
Sbjct: 65 QKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLT 124
Query: 535 GIRAV----PLHDRKGERYKSVKLLM 556
+ + L R K +K+
Sbjct: 125 PDKEISGWYYLLGEHLGRTKHLKVAR 150
|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 1e-06
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 458 PPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE 517
+ Y + + V + T+ + PSW ++F F ++ +L L +EV +
Sbjct: 22 KFNTYVTLKVQNVKSTTIAVRGSQ------PSWEQDFMFEINRLDLGLT-VEVWNKGL-I 73
Query: 518 KDDFGGQTCLPVSELKQ 534
D G +P+ ++Q
Sbjct: 74 WDTMVGTVWIPLRTIRQ 90
|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Length = 153 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-06
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 454 DAYSPPDFYARVGIAGVPADTVM--KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIE 509
D D Y +V + A + KKT + +NE F F + L +
Sbjct: 46 DVSGLSDPYVKVNL--YHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 103
Query: 510 VHEYDMSEKDDFGGQTCLPVSELKQGIR 537
V + + +++ G+ L + G
Sbjct: 104 VLDSERGSRNEVIGRLVLGATAEGSGGG 131
|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 141 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-06
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSEL 532
+TK N P WNE F F E + L ++V +YD ++D G+ +P++++
Sbjct: 63 LETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKV 121
|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Length = 132 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-06
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 459 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK 518
PD +A++ + G T T+++ P WN+ ++ V + + I V + K
Sbjct: 26 PDPFAKIVVDG---SGQCHSTDTVKNTLDPKWNQHYDLY--VGKTDSITISVWNHKKIHK 80
Query: 519 DD---FGGQTCLPVSELKQG 535
F G L + + +
Sbjct: 81 KQGAGFLGCVRLLSNAISRL 100
|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Length = 171 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 18/76 (23%), Positives = 27/76 (35%)
Query: 457 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS 516
S P Y +V + A KKT+ P + + F S L I +Y
Sbjct: 50 STPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRM 109
Query: 517 EKDDFGGQTCLPVSEL 532
+ F G + + EL
Sbjct: 110 DHKCFMGVAQILLEEL 125
|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Length = 138 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-06
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 534
KKT T + N P +NE F F + +L + I V + D ++D G+ L
Sbjct: 55 KKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPG 114
Query: 535 GIR 537
++
Sbjct: 115 EVK 117
|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Length = 749 | Back alignment and structure |
|---|
Score = 49.2 bits (116), Expect = 3e-06
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513
D PD Y + I+ P K+T+ ++ P WNE FEF L + +L I + +
Sbjct: 37 DMLDTPDPYVELFISTTPDSR--KRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94
Query: 514 DMSEKDDFGGQTCLPVSELK 533
+ D+ G VS +K
Sbjct: 95 NY-VMDETLGTATFTVSSMK 113
|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-06
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 477 KKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELK 533
KT+ L P+++E F F + ++ L + +D +DD G+ +P+S ++
Sbjct: 60 VKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIE 119
|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Length = 142 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-06
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 477 KKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
+TKTL + P WNE ++ ++ ++ LRI V + D ++F G+T + +L
Sbjct: 68 LRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKL 126
|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Length = 159 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 6e-06
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 453 FDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEV 510
D D Y ++ + KKT ++ P +NE F F + ++ + + V
Sbjct: 40 MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99
Query: 511 HEYDMSEKDDFGGQTCLPVSELKQGIR 537
+YD K+D G+ + + +R
Sbjct: 100 LDYDKIGKNDAIGKVFVGYNSTGAELR 126
|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Length = 142 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 8e-06
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 459 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDM 515
P +V + + ++TK ++ + P WN+ + +S+ +L L + V +YD
Sbjct: 49 PG-RGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR 107
Query: 516 SEKDDFGGQTCLPVSEL 532
+DF G+ + +S
Sbjct: 108 FSSNDFLGEVLIDLSST 124
|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 142 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-05
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDD--FGGQTCLPVSEL 532
+KT + P +++ F+F +S+PE+ L + V D G+ + ++
Sbjct: 62 RKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASE 121
|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Length = 134 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSEL 532
+KTK P++NE + E L++ V + ++ F G LP+ +
Sbjct: 58 RKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDF 116
|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Length = 129 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-05
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEV 510
+ P + Y ++ +D ++TKT++ P WN+ F + P+ E +L I +
Sbjct: 34 EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 93
Query: 511 HEYDM--SEKDDFGGQTCLPVSEL 532
+ E+ +F G+ + +
Sbjct: 94 WDQARVREEESEFLGEILIELETA 117
|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Length = 540 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 3e-05
Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 477 KKTKTLEDNWIPSWNEEFEFPLSVPELA-LLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 535
+T + +N P W ++ +F + LR++V + D DD G G
Sbjct: 427 FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRS---PHSG 483
Query: 536 IRAVPLHDRKGERYKSVKL 554
V G S
Sbjct: 484 FHEVTCELNHGRVKFSYHA 502
|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} Length = 144 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 4e-05
Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 459 PDFYARVGIAGVPADTVMKKTKTLEDNWIP-SWNEEFEFPLSVPELA--LLRIEVHEYDM 515
D A+V G ++ LE+ ++E F +P++ +L I++ Y
Sbjct: 37 ADRIAKVTFRGQS-----FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91
Query: 516 SEKDDFGGQTCLPVSEL 532
+ G + + ++
Sbjct: 92 VFSNKLIGTFRMVLQKV 108
|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 141 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 5e-05
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEV 510
+ P + Y ++ +D ++TKT++ P WN+ F + P+ E +L I +
Sbjct: 37 EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 96
Query: 511 HEYDM--SEKDDFGGQTCLPVSEL 532
+ E+ +F G+ + +
Sbjct: 97 WDQARVREEESEFLGEILIELETA 120
|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Length = 167 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 5e-05
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 460 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKD 519
+ Y + + V + T+ + PSW ++F F ++ +L L +EV + D
Sbjct: 33 NTYVTLKVQNVESTTIAVRGSQ------PSWEQDFMFEINRLDLGLT-VEVWNKGL-IWD 84
Query: 520 DFGGQTCLPVSELKQ 534
G +P+ ++Q
Sbjct: 85 TMVGTVWIPLRTIRQ 99
|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Length = 483 | Back alignment and structure |
|---|
Score = 42.7 bits (99), Expect = 3e-04
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 459 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYD---M 515
+Y + + + K ++ + W E FEF AL + D
Sbjct: 27 KRYYCELCLDDMLYARTTSKPRSASGDT-VFWGEHFEFNNLPAVRALRLHLYRDSDKKRK 85
Query: 516 SEKDDFGGQTCLPVSELKQG 535
+K + G +PV+ L
Sbjct: 86 KDKAGYVGLVTVPVATLAGR 105
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 561 | |||
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 100.0 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 100.0 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 100.0 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 100.0 | |
| 3h4x_A | 339 | Phosphatidylinositol-specific phospholipase C1; PI | 99.94 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 99.72 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 99.7 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 99.68 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 99.67 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 99.66 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 99.65 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 99.64 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 99.63 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 99.6 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 99.59 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 99.59 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 99.59 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 99.59 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 99.58 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 99.57 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 99.57 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 99.57 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 99.57 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 99.56 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 99.56 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 99.56 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 99.56 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 99.56 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 99.55 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 99.55 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 99.55 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 99.54 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 99.54 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 99.53 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 99.53 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 99.53 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 99.52 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 99.51 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.48 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 99.46 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.4 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.4 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 99.4 | |
| 3jzy_A | 510 | Intersectin 2; C2 domain, structural genomics cons | 99.35 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 99.33 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.27 | |
| 1cjy_A | 749 | CPLA2, protein (cytosolic phospholipase A2); lipid | 99.26 | |
| 3nsj_A | 540 | Perforin-1; pore forming protein, immune system; H | 99.26 | |
| 2plc_A | 274 | PI-PLC, phosphatidylinositol-specific phospholipas | 98.95 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 98.93 | |
| 3bxj_A | 483 | RAS GTPase-activating protein syngap; GTPase activ | 98.9 | |
| 1yrk_A | 126 | NPKC-delta, protein kinase C, delta type; C2 domai | 97.79 | |
| 2enj_A | 138 | NPKC-theta, protein kinase C theta type; beta-sand | 97.68 | |
| 3ea1_A | 298 | 1-phosphatidylinositol phosphodiesterase; phosphat | 97.46 | |
| 3v1h_A | 306 | 1-phosphatidylinositol phosphodiesterase; PI-catio | 97.37 | |
| 3qvq_A | 252 | Phosphodiesterase OLEI02445; structural genomics, | 96.41 | |
| 3no3_A | 238 | Glycerophosphodiester phosphodiesterase; structura | 96.34 | |
| 1vd6_A | 224 | Glycerophosphoryl diester phosphodiesterase; glyce | 96.3 | |
| 2otd_A | 247 | Glycerophosphodiester phosphodiesterase; structura | 96.06 | |
| 3ks6_A | 250 | Glycerophosphoryl diester phosphodiesterase; struc | 95.86 | |
| 2o55_A | 258 | Putative glycerophosphodiester phosphodiesterase; | 95.78 | |
| 1o1z_A | 234 | GDPD, glycerophosphodiester phosphodiesterase; TM1 | 95.76 | |
| 3i10_A | 278 | Putative glycerophosphoryl diester phosphodiester; | 95.61 | |
| 2pz0_A | 252 | Glycerophosphoryl diester phosphodiesterase; glyce | 95.43 | |
| 3ch0_A | 272 | Glycerophosphodiester phosphodiesterase; YP_677622 | 95.2 | |
| 3mz2_A | 292 | Glycerophosphoryl diester phosphodiesterase; struc | 95.02 | |
| 3l12_A | 313 | Putative glycerophosphoryl diester phosphodiester; | 95.01 | |
| 3hhm_A | 1091 | Phosphatidylinositol-4,5-bisphosphate 3-kinase cat | 94.41 | |
| 1zcc_A | 248 | Glycerophosphodiester phosphodiesterase; NYSGXRC, | 93.6 | |
| 2wxf_A | 940 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 93.13 | |
| 3l4c_A | 220 | Dedicator of cytokinesis protein 1; DOCK180, DOCK1 | 92.34 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 92.24 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 91.87 | |
| 1xx1_A | 285 | Smase I, sphingomyelinase I; structure, quick cryo | 91.7 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 91.7 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 91.49 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 91.16 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 91.01 | |
| 1ydy_A | 356 | Glycerophosphoryl diester phosphodiesterase; struc | 91.01 | |
| 2oog_A | 287 | Glycerophosphoryl diester phosphodiesterase; phosp | 90.61 | |
| 1e7u_A | 961 | Phosphatidylinositol 3-kinase catalytic subunit; p | 90.54 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 90.47 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 90.44 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 90.42 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 90.16 | |
| 2y3a_A | 1092 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 89.64 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 89.45 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 89.06 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 88.56 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 88.23 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 88.13 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 87.9 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 87.2 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 87.18 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 87.0 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 86.92 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 86.78 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 86.78 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 86.72 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 86.55 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 86.18 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 86.1 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 85.93 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 85.9 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 85.65 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 85.58 | |
| 1a4p_A | 96 | S100A10; S100 family, EF-hand protein, ligand of a | 85.16 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 85.04 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 84.81 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 84.65 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 84.65 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 84.62 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 84.52 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 84.46 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 84.3 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 84.27 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 84.16 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 84.15 | |
| 1pul_A | 125 | Hypothetical protein C32E8.3 in chromosome I; alph | 83.87 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 83.85 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 83.75 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 83.61 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 83.52 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 83.51 | |
| 3rlg_A | 302 | Sphingomyelin phosphodiesterase D lisictox-alphai; | 83.41 | |
| 1cb1_A | 78 | Calbindin D9K; calcium-binding protein; NMR {Sus s | 83.26 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 83.21 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 82.89 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 82.79 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 82.79 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 82.76 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 82.75 | |
| 1k8u_A | 90 | S100A6, calcyclin, CACY; calcium regulatory protei | 82.74 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 82.48 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 82.44 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 82.43 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 82.39 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 82.37 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 82.35 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 82.3 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 82.28 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 82.19 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 82.14 | |
| 1h8b_A | 75 | ACT-EF34, alpha-actinin 2, skeletal muscle isoform | 82.02 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 81.88 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 81.78 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 81.52 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 81.4 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 81.17 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 81.12 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 80.97 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 80.81 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 80.79 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 80.68 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 80.65 |
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-138 Score=1161.53 Aligned_cols=510 Identities=32% Similarity=0.493 Sum_probs=425.2
Q ss_pred CchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCCCCCC
Q 008582 23 APDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPL 101 (561)
Q Consensus 23 ~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~ 101 (561)
.|+||..+|..|..+ +.|+.++|++||.++|++..++.++|.+||++|..... ..+.+.|++++|.+||++..|.++
T Consensus 78 ~~~el~~aF~~fD~~~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~--~~~dG~Is~deF~~~L~s~~~~~~ 155 (624)
T 1djx_A 78 QRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSET--AKAQRQMTKDGFLMYLLSADGNAF 155 (624)
T ss_dssp CCHHHHHHHHHHHTTSSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHH--HHHTTEECHHHHHHHHHSTTTBSB
T ss_pred cHHHHHHHHHHhcCCCCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChh--hccCCCCCHHHHHHHhcCcccccc
Confidence 578999999999876 89999999999999999976899999999999973211 113467999999999999999999
Q ss_pred CC-CCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchH
Q 008582 102 SP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180 (561)
Q Consensus 102 ~~-~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f 180 (561)
+| +..++|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ ++|||||||||||+|+|
T Consensus 156 ~p~~~~v~~dm~~pLs~Yfi~SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlts~i~f 234 (624)
T 1djx_A 156 SLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILF 234 (624)
T ss_dssp CGGGGSCCSCTTSCGGGEEECEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGG-GCCEECCTTSCCCCEEH
T ss_pred CcccccccccccCcchhheeecccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEecCCcccccccH
Confidence 86 46799999999999999999999999999999999999999999999999999999976 57999999999999999
Q ss_pred HHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchh
Q 008582 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYL 259 (561)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~ 259 (561)
+|||+||++|||++|+||||||||||||++||.+||+||++||||+||+++.+ ....||||++||||||||+|+++...
T Consensus 235 ~~v~~~I~~~AF~~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd~L~~~~~~~~~~~lpsp~~Lk~kilik~k~~~~~~ 314 (624)
T 1djx_A 235 CDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLL 314 (624)
T ss_dssp HHHHHHHHHHTTTSCSSCEEEEEEEECCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSCCCTTTTTTCEEEEECCC----
T ss_pred HHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCccCCcCCCCCHHHHCCCEEEEecCCCccc
Confidence 99999999999999999999999999999999999999999999999997743 46899999999999999999986543
Q ss_pred hhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCC-CCCCCccccccccccchhhhccceecccccc
Q 008582 260 EAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGV-DNDEEDSDDKSQHNEAPEYRKLIAIHAGKPK 338 (561)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 338 (561)
+.... .+...+..+ ++ +..++.+.++ ........++.+.+++++|++|+.|+.++++
T Consensus 315 ~~~~~----~~~~~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ls~l~~y~~~~~f 372 (624)
T 1djx_A 315 PAGGE----NGSEATDVS-DE-----------------VEAAEMEDEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVHF 372 (624)
T ss_dssp --------------------------------------------------------------CCCHHHHTTEEEEEEECC
T ss_pred ccccc----cCcccccCC-cc-----------------cccccccccccccccccccccccccccHHHhhhhhhhcCccC
Confidence 22110 000000000 00 0000000000 0000011122346789999999999988888
Q ss_pred CCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecc----
Q 008582 339 GGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ---- 414 (561)
Q Consensus 339 ~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~Q---- 414 (561)
++|..........++|+||||+++.+++++++.+|++||++||+||||+|+|||||||||++||++||||||||||
T Consensus 373 ~~~~~~~~~~~~~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~ 452 (624)
T 1djx_A 373 GGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGP 452 (624)
T ss_dssp CCCCSSSSSSCCTTEEEEEEHHHHHHHHHHHHHHHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCSH
T ss_pred CCcchhhhcCCccceEeeccHHHHHHHHHHhHHHHHHHhhhcceeeccCCccCCCCCCCchHHhhccceeeeecccCCch
Confidence 8777655431115789999999999999999999999999999999999999999999999999999999999999
Q ss_pred -----------cCCCCcccCCCCCC--------------C--CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEE
Q 008582 415 -----------TGPHNEVFDPKVKL--------------P--AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGI 467 (561)
Q Consensus 415 -----------nG~~Gyvl~P~~~~--------------p--~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l 467 (561)
||+||||+||.... | ....|+|+|++|++|+.. .....+.+||||+|.+
T Consensus 453 ~m~ln~g~F~~ng~~GYvlKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi~A~~L~~~----d~~~~~~~DPYV~V~l 528 (624)
T 1djx_A 453 EMDVYLGCFQDNGGCGYVLKPAFLRDPNTTFNSRALTQGPWWRPERLRVRIISGQQLPKV----NKNKNSIVDPKVIVEI 528 (624)
T ss_dssp HHHHHHHHHHSGGGCSEEECCGGGGCTTCCCCTTSCCSSTTCCCEEEEEEEEEEESCCCC----SSCSSSCCCEEEEEEE
T ss_pred HHhHHHHHhhcCCCCccEECCHHHcCCCCCcCcccccccCCccceEEEEEEEEcCCCCcc----cccccCCCCcEEEEEE
Confidence 79999999995311 1 346899999999999742 1112467899999999
Q ss_pred eccCCCceeeecccCCCC-CCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCC
Q 008582 468 AGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKG 546 (561)
Q Consensus 468 ~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G 546 (561)
.|.+.|..++||+++++| +||+|||+|.|.+..+++++|+|.|||+|..+++++||++++||.+|++||||+||+|.+|
T Consensus 529 ~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~r~v~L~d~~g 608 (624)
T 1djx_A 529 HGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNG 608 (624)
T ss_dssp ESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEEEEEEEECTTS
T ss_pred ecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCcEEEeCCCCCc
Confidence 998888889999999998 9999999999999999999999999999988889999999999999999999999999999
Q ss_pred CcccCeEEEEEEEEC
Q 008582 547 ERYKSVKLLMHFEFI 561 (561)
Q Consensus 547 ~~~~~atLlv~~~f~ 561 (561)
+++.+++|||||+|.
T Consensus 609 ~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 609 DQHPSATLFVKISIQ 623 (624)
T ss_dssp CEEEEEEEEEEEEEE
T ss_pred CCCCceEEEEEEEEE
Confidence 999999999999973
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-136 Score=1165.60 Aligned_cols=490 Identities=27% Similarity=0.424 Sum_probs=413.0
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHHh--hhhhhhhccCCCCHHHH
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRE--LKHLNIFQRRGLNLEAF 89 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~--~~~~~~~~~~~l~~~gF 89 (561)
++|+||++||..|+.+ +.||. +|++||+++|++.. ++.++|.+||++|+. ... ...++.|+++||
T Consensus 226 ~~R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~--~~~~g~LsldgF 302 (816)
T 3qr0_A 226 LERSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKK--GKKKGQLTKEGL 302 (816)
T ss_dssp CCCTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGG--GCBTTEECHHHH
T ss_pred CCHHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchh--hhccCCccHHHH
Confidence 5799999999999965 78999 99999999999853 689999999999984 211 113457999999
Q ss_pred HHhhcCCCCCCCCC-CCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceE
Q 008582 90 FKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168 (561)
Q Consensus 90 ~~~L~s~~n~~~~~-~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv 168 (561)
++||+|++|.++.+ +..++|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||||
T Consensus 303 ~~yL~S~~~~~~~~~~~~v~~dm~~Pl~~YfI~sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~-~ePvv 381 (816)
T 3qr0_A 303 LYFLMCEENNLTPMHRLDLGANMKLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKD-GEPII 381 (816)
T ss_dssp HHHHHSGGGCSSCHHHHSSCSCCCSCGGGEEECBBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTT-SSCEE
T ss_pred HHHhhcccccccchhhcccccccCCchhhheecccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCC-CCceE
Confidence 99999999999975 46799999999999999999999999999999999999999999999999999999986 57999
Q ss_pred EeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhh
Q 008582 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPES 243 (561)
Q Consensus 169 ~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~ 243 (561)
||||||||+|+|+|||+||++|||++|+|||||||||||+++||.+||+||++||||+|++++.+. ...||||++
T Consensus 382 ~HG~Tlts~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lpsP~~ 461 (816)
T 3qr0_A 382 THGFTMCTEVLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTPYD 461 (816)
T ss_dssp CCTTSSCCCEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSTTCCCCCTTT
T ss_pred ccCCcccccccHHHHHHHHHHhcccCCCCCEEEEEecCCCHHHHHHHHHHHHHHhhhhhccCCccccccccCCcCCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999976432 268999999
Q ss_pred ccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 008582 244 LKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEA 323 (561)
Q Consensus 244 Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (561)
||||||||+|+++......+ .....+++.. ..... +.......+...+++
T Consensus 462 Lk~kIlik~K~~~~~~~~~~----------~~~~~~~~~~----~~~~~----------------~~~~~~~~~~~~~i~ 511 (816)
T 3qr0_A 462 LRKKILIKNKKMHKGTGDDE----------ELAGLTDEEK----KKIEK----------------EKKDAGTAAKEAEAA 511 (816)
T ss_dssp TTTCEEEECCCCC--------------------CCCHHHH----HHHHH----------------HHHHHGGGGSCCCCC
T ss_pred HcCCEEEEeCCCCCcCCCcc----------cccccccchh----hcccc----------------cccccccccchhhhH
Confidence 99999999999753110000 0000000000 00000 000000111234678
Q ss_pred hhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccc
Q 008582 324 PEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWS 403 (561)
Q Consensus 324 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~ 403 (561)
++|++|++|+.+..+.+|....... ..++|+||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||+
T Consensus 512 ~eLs~Lv~y~~~v~f~~f~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~ 590 (816)
T 3qr0_A 512 EEMSALVNYIQPVHFTTFEQAQKKD-RHYEMSSMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWN 590 (816)
T ss_dssp HHHHTTCSSSEECCCCCHHHHHHHT-CTTEEEEEEHHHHHHHHHHCHHHHHHHTTTSCEEEECCTTCTTCCCCCTHHHHT
T ss_pred HHHHHHHhhhCCcCCCCcccchhcC-CcceEecccHHHHHHHHHhhhHHHHHhhhcccceeCCCccccCCCCCCchhhcc
Confidence 9999999998877666665443322 346789999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeecc---------------cCCCCcccCCCC------------CCC----CCceEEEEEEEecCCCCCCCCCc
Q 008582 404 HGAQMVAFNMQ---------------TGPHNEVFDPKV------------KLP----AKKTLKVTVYMGEGWYYDFPHTH 452 (561)
Q Consensus 404 ~G~QmVALN~Q---------------nG~~Gyvl~P~~------------~~p----~~~~L~V~Visaq~L~~~~~~~~ 452 (561)
+|||||||||| ||+||||+||.. ..+ .+.+|+|+|++|++|+.
T Consensus 591 ~G~QmVALN~QT~d~~m~LN~g~F~~nG~cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~------ 664 (816)
T 3qr0_A 591 AGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLDKRFDPFTESTVDGVVAGTIEIKIISAQFLSD------ 664 (816)
T ss_dssp TTCSEECBCTTCCSHHHHHHHHHTTTTTTCSEEECCHHHHCTTCCCCTTCCSCCTTSCCEEEEEEEEEEECCCS------
T ss_pred cCceEEeecCcCCChhhhhhhhhhccCCceeeeecChHhcCCCcccCCCCCCCcCCccceEEEEEEEEcccCCC------
Confidence 99999999999 899999999942 111 24689999999999852
Q ss_pred cCCCCCCCceeEEEEeccCCCc--eeeecccCCCC-CCCccccE-EEEe-eecCCceEEEEEEEecCCCCCCcceEEEEE
Q 008582 453 FDAYSPPDFYARVGIAGVPADT--VMKKTKTLEDN-WIPSWNEE-FEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCL 527 (561)
Q Consensus 453 ~~~~~~~DpyV~V~l~g~p~d~--~k~kTkvi~nn-~nP~WNE~-f~F~-v~~pela~Lrf~V~D~d~~~~dd~iGq~~l 527 (561)
..+||||+|.+.|.|.|. .++||+++.+| +||+|||+ |.|. |..|++++|+|.|||++ +++||++++
T Consensus 665 ----~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d----ddfiG~~~i 736 (816)
T 3qr0_A 665 ----KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----GKFIGHRVM 736 (816)
T ss_dssp ----SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT----SCEEEEEEE
T ss_pred ----CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC----CCeeeEEEE
Confidence 136999999999998887 67799999876 99999998 9998 88999999999999975 799999999
Q ss_pred eCcccCCCceEEEccCCCCCcccCeEEEEEEEE
Q 008582 528 PVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 528 pL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||++|++|||||||+|.+|+++..|+||||+++
T Consensus 737 pL~~L~~GyR~vpL~~~~g~~~~~atLfv~i~~ 769 (816)
T 3qr0_A 737 PLDGIKPGYRHVPLRNESNRPLGLASVFAHIVA 769 (816)
T ss_dssp ESTTCCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EHHHcCCcceEEEEeCCCCCCCCceEEEEEEEE
Confidence 999999999999999999999999999999986
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-136 Score=1167.23 Aligned_cols=519 Identities=28% Similarity=0.440 Sum_probs=400.6
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHH
Q 008582 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFK 91 (561)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~l~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~ 91 (561)
.+|+||.++|..|.. + ++||.++|++||++.||+.. ++.++|.+||++|+... ...+.+.|++++|.+
T Consensus 216 ~~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~--~~~~dg~is~eeF~~ 293 (799)
T 2zkm_X 216 CPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSG--INAQRGQLSPEGMVW 293 (799)
T ss_dssp SCCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC----------CCHHHHHH
T ss_pred cCHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhccc--ccccCCccchhhhhh
Confidence 468999999999953 4 89999999999999999852 67889999999997321 112356799999999
Q ss_pred hhcCCCCCCCCC-CCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCC-CCCceEE
Q 008582 92 YLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVL 169 (561)
Q Consensus 92 ~L~s~~n~~~~~-~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~ 169 (561)
||++.+|.++++ +..|+|||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++ .++||||
T Consensus 294 ~L~S~~n~~~~~~~~~v~~dm~~PLshYfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~ 373 (799)
T 2zkm_X 294 FLCGPENSVLAQDKLLLHHDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIIT 373 (799)
T ss_dssp HHHSTTSCSBCGGGGSSCSCCCSCGGGEEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEEC
T ss_pred cccCccccccchhhcccccccCCchhhheEeccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEE
Confidence 999999999975 56799999999999999999999999999999999999999999999999999999972 2579999
Q ss_pred eCCcccccchHHHHHHHHhhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhh
Q 008582 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPES 243 (561)
Q Consensus 170 HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~ 243 (561)
|||||||+|+|+|||+||++|||++|+||||||||||| |++||.+||+||++||||+||+++.+. ...||||++
T Consensus 374 HG~Tlts~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lPSP~~ 453 (799)
T 2zkm_X 374 HGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPED 453 (799)
T ss_dssp CTTSSCCCEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCCTTT
T ss_pred eCCcccccccHHHHHHHHHHhcccCCCCCEEEEccccCCCHHHHHHHHHHHHHHhhhheecCCccccccccCCCCCCHHH
Confidence 99999999999999999999999999999999999999 999999999999999999999976432 378999999
Q ss_pred ccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCC---------cc
Q 008582 244 LKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEE---------DS 314 (561)
Q Consensus 244 Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 314 (561)
||||||||+|+++...+.........++......+....|+.+......... ++.+++.+. .+++. +.
T Consensus 454 Lk~kIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~ 530 (799)
T 2zkm_X 454 LRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAVWAGEEGTELEEEE-VEEEEEEES--GNLDEEEIKKMQSDEG 530 (799)
T ss_dssp TTTCEEEECCCC-----------------------------------------------------CCSHHHHHHHHHTTG
T ss_pred HCCCEEEEecCCCcccccccccccccccccccccCccccccCcccccccccc-ccccccccc--cccchhhhhccccccc
Confidence 9999999999976432111000000000000000011112211110000000 000000000 00010 00
Q ss_pred ccccccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCC
Q 008582 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (561)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSS 394 (561)
..+....++++|++|++|+.+..+.+|....+.. ..++|+||||+++.+++++++.+|++||++||+||||+|+|||||
T Consensus 531 ~~~~~~~~~~els~Lv~y~~~~~f~~~~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~~SS 609 (799)
T 2zkm_X 531 TAGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSS 609 (799)
T ss_dssp GGGGCCCCCHHHHTTCSSCEECCCCCHHHHHHHT-CTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSEEEEECCTTCTTCC
T ss_pred ccccccchhhhhcceeEEecCcCCCchhhhhhcC-CccceecCCHHHHHHHHHHCHHHHHHHhhhcceeeccCCCcCCCC
Confidence 0112345789999999988776666666554432 356799999999999999999999999999999999999999999
Q ss_pred CCCcccccccccceeeeecc---------------cCCCCcccCCCCCC----------------CCCceEEEEEEEecC
Q 008582 395 NYNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVKL----------------PAKKTLKVTVYMGEG 443 (561)
Q Consensus 395 Nf~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~~----------------p~~~~L~V~Visaq~ 443 (561)
||||++||++|||||||||| ||+||||+||...+ .++++|+|+|++|++
T Consensus 610 N~~P~~~W~~G~QmVAlN~Qt~d~~m~ln~g~F~~nG~cGYVlKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visa~~ 689 (799)
T 2zkm_X 610 NYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPDKQFNPFSVDRIDVVVATTLSITVISGQF 689 (799)
T ss_dssp CCCSHHHHHTTCSEECBCTTCCSHHHHHHHHHTTTGGGCSEEECCGGGTCTTSCCCTTSCCTTTTTTCEEEEEEEEEEES
T ss_pred CCCcHHHHhccceEeeeccccCchHHHHHHhhhhccCCCCceECCHHHhCCCccCCCcccccccceeeeeEEEEEEeccc
Confidence 99999999999999999999 89999999996421 124589999999999
Q ss_pred CCCCCCCCccCCCCCCCceeEEEEeccCCCce-eeecc-cCCCC-CCCcccc-EEEE-eeecCCceEEEEEEEecCCCCC
Q 008582 444 WYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTK-TLEDN-WIPSWNE-EFEF-PLSVPELALLRIEVHEYDMSEK 518 (561)
Q Consensus 444 L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~-k~kTk-vi~nn-~nP~WNE-~f~F-~v~~pela~Lrf~V~D~d~~~~ 518 (561)
|+. ..+||||+|.+.|.|.|.. ++||+ ++++| +||+||| +|.| .|..|++++|+|.|+|+|
T Consensus 690 L~~----------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d---- 755 (799)
T 2zkm_X 690 LSE----------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---- 755 (799)
T ss_dssp CCS----------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT----
T ss_pred cCc----------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC----
Confidence 862 2369999999999888764 67999 88765 9999999 6999 898999999999999986
Q ss_pred CcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEE
Q 008582 519 DDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 519 dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
+++||++++||++|++|||||||+|.+|+++.+++|||||++
T Consensus 756 ~d~iG~~~ipl~~L~~G~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 756 NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred CCccceEeeehhhcCCCcEEEeccCCCCCCCCceEEEEEEEE
Confidence 799999999999999999999999999999999999999987
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-134 Score=1156.05 Aligned_cols=522 Identities=29% Similarity=0.436 Sum_probs=412.8
Q ss_pred CCCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCC--------CCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHH
Q 008582 21 SEAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKED--------KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFF 90 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~-~-~~l~~~~~~~Fl~~~Q~~~--------~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~ 90 (561)
++.|+||++||..|.. + ++||.++|++||+++|++. .++.++|.+||++|+.... ...++.|+++||+
T Consensus 219 l~~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~--~~~~g~LsldgF~ 296 (885)
T 3ohm_B 219 LCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQ--FLERDQMSMEGFS 296 (885)
T ss_dssp HSCCHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHH--HHHTTEECHHHHH
T ss_pred cCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChh--hhccCccchhhhh
Confidence 4579999999999954 4 8999999999999999985 3688999999999984211 1235679999999
Q ss_pred HhhcCCCCCCCCC-CCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceE
Q 008582 91 KYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDV 168 (561)
Q Consensus 91 ~~L~s~~n~~~~~-~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv 168 (561)
+||+|..|.++++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +.+||||
T Consensus 297 ~yL~S~~~~~~~~~~~~v~~dm~~Pls~YfI~ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v 376 (885)
T 3ohm_B 297 RYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFI 376 (885)
T ss_dssp HHHTSTTSCSSCHHHHSSCSCCCSCGGGEEECCBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEE
T ss_pred hhccCcccCccCccccccccccCcchhhheeeccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEE
Confidence 9999999999975 4679999999999999999999999999999999999999999999999999999994 2368999
Q ss_pred EeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChh
Q 008582 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPE 242 (561)
Q Consensus 169 ~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~ 242 (561)
|||||||++|+|+|||+||++|||++|+||||||||||| +++||.+||+||++||||+||+++.+. ...||||+
T Consensus 377 ~hg~t~t~~i~f~~v~~~i~~~af~~s~yPvilsle~h~~~~~qq~~~a~~~~~~~g~~L~~~~~~~~~~~~~~~lpsp~ 456 (885)
T 3ohm_B 377 THGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIEPLDKYPLAPGVPLPSPQ 456 (885)
T ss_dssp CSTTSEECCEEHHHHHHHHHHHTTSSCCSCEEEEEEEECCCTTHHHHHHHHHHHHHGGGBCCSCBTTBCSSSSCCCCCTT
T ss_pred eeCCcccCcccHHHHHHHHHHhhccCCCCCEEEEEecCCCCHHHHHHHHHHHHHHhhHhhccCcccccccccCCcCCCHH
Confidence 999999999999999999999999999999999999999 799999999999999999999976432 36899999
Q ss_pred hccCcEEEecCCCCchhhhH---hhhhh-----hc---cccCCC--C-------CCccc-cc--cCCCCC----------
Q 008582 243 SLKRRIIISTKPPKEYLEAK---EEKEK-----EN---DSQRGK--G-------SADEE-AW--GKEVPN---------- 289 (561)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~---~~~~~-----~~---~~~~~~--~-------~~~~~-~~--~~~~~~---------- 289 (561)
+||||||||+|+++...... ....+ .. +..... . ++.+. .+ |.+...
T Consensus 457 ~Lk~kilik~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (885)
T 3ohm_B 457 DLMGRILVKNKKRHRPSAGGPDSAGRKRPLEQSNSALSESSAATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKS 536 (885)
T ss_dssp TTTTCEEEECCCCC------------------------------------------------------------------
T ss_pred HHcCcEEEEecCCCccccccccccccccccccccccccccccccccCccccccccccccccccccccccccccccccccc
Confidence 99999999999976421000 00000 00 000000 0 00000 00 000000
Q ss_pred cc--c---c---CCCCCCCCCCCCCCCCCCCccc---------cccccccchhhhccceeccccccCCcccccccCCCce
Q 008582 290 LK--S---L---NNSACDKDDFDGGVDNDEEDSD---------DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKV 352 (561)
Q Consensus 290 ~~--~---~---~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 352 (561)
.+ . . ..+.+.+.+ +.++.+++.+.. .+....++++|++|+.|+.+..+.+|...... ...+
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~eLS~LvvY~~~vkf~~f~~~~~~-~~~~ 614 (885)
T 3ohm_B 537 LGDEGLNRGPYVLGPADREDE-EEDEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKR-NKCF 614 (885)
T ss_dssp --------------------------------------CTTGGGTTCCCCCHHHHTTCSSCEECCCCCHHHHHHH-TCTT
T ss_pred ccccccccccccccccccccc-cccccccchhhhhccccccccccccchhhHHHHhHHhhhcCccCCCccccccc-CCcc
Confidence 00 0 0 000000000 000000000000 01123578999999999887766666543221 2457
Q ss_pred eeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecc---------------cCC
Q 008582 353 RRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ---------------TGP 417 (561)
Q Consensus 353 ~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~Q---------------nG~ 417 (561)
+|+||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||| ||+
T Consensus 615 ~~~S~sE~k~~~~~~~~~~~~~~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVALN~QT~d~~m~lN~g~F~~nG~ 694 (885)
T 3ohm_B 615 EMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGR 694 (885)
T ss_dssp EEEEEEHHHHHHHHHHSHHHHHHHHHHSCEEEECCTTCTTCCCCCTHHHHTTTCSEECBCTTCCSHHHHHHHHHHTTGGG
T ss_pred eECCccHHHHHHHHHhCHHHHHHHhhccceeeccCccccCCCCCCchhhcccCceeeeecCCCCCcccchhhhhhccCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CCcccCCCCCC----------------CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCce-eeecc
Q 008582 418 HNEVFDPKVKL----------------PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTK 480 (561)
Q Consensus 418 ~Gyvl~P~~~~----------------p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~-k~kTk 480 (561)
|||||||...+ +++.+|+|+|++|++|+. ..+||||+|.+.|.|.|.. ++||+
T Consensus 695 cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~----------~~~DPYV~V~l~g~p~D~~~k~kTk 764 (885)
T 3ohm_B 695 SGYLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSD----------RKVGIYVEVDMFGLPVDTRRKYRTR 764 (885)
T ss_dssp CSEEECCGGGTCTTCCCCTTCSSCCTTCCCEEEEEEEEEEESCCS----------SCCCEEEEEEEESSTTTCBCCCCCC
T ss_pred eeeeecCHHHcCCCcCcCCCcCcccCcccceEEEEEEEEeccCcc----------cCCCcEEEEEEeCCCcccccceeeE
Confidence 99999995321 124589999999999962 1369999999999988875 57999
Q ss_pred cCCCC-CCCcccc-EEEEe-eecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEE
Q 008582 481 TLEDN-WIPSWNE-EFEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMH 557 (561)
Q Consensus 481 vi~nn-~nP~WNE-~f~F~-v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~ 557 (561)
++.+| +||+||| +|.|. |..|++++|+|.|||+| +++||++++||++|++|||||||+|..|+++..|+||||
T Consensus 765 vi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----ddfiG~~~lpL~~L~~GyR~vpL~~~~g~~l~~atLfv~ 840 (885)
T 3ohm_B 765 TSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPALLIY 840 (885)
T ss_dssp CCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TEEEEEEEEETTTCCCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred EeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----ccEEeeEEEEHHHcCCCceEEEecCCCCCccCceEEEEE
Confidence 99876 9999999 69998 88899999999999986 799999999999999999999999999999999999999
Q ss_pred EEE
Q 008582 558 FEF 560 (561)
Q Consensus 558 ~~f 560 (561)
|++
T Consensus 841 i~~ 843 (885)
T 3ohm_B 841 TEA 843 (885)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
|
| >3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-28 Score=242.82 Aligned_cols=138 Identities=19% Similarity=0.363 Sum_probs=119.6
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc-------------
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM------------- 174 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl------------- 174 (561)
...+++||+||+|..+||||++|+ ...+++||.+|||+||||||++..++...|+||.++
T Consensus 21 ~~~~~~pls~~T~~g~HNSY~~g~-------~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~~nnC~~as~~~ 93 (339)
T 3h4x_A 21 MEPAATTYGTSTSVGVHNAYEKEK-------YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGNNSNCEGAANAS 93 (339)
T ss_dssp ----CCBTTSEEEEEETTTTCTTT-------CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSCCSSCCCCSSGG
T ss_pred CCcccCccccceEeeccccccccC-------cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccccccccccccccc
Confidence 357899999999999999999997 357899999999999999998876677999999875
Q ss_pred -----cccchHHHHHHHHhhhc-cccCCCceEEEeccCCCHHHH-----HHHHHHHHHHhhccccCCCC-----CCC---
Q 008582 175 -----TAPVELIKCLRSIKEYA-FVASEYPVVITLEDHLTPDLQ-----AKVAEMVTQTLGEILFTPGS-----ECL--- 235 (561)
Q Consensus 175 -----ts~i~f~dvi~aI~~~A-F~~S~yPvIlSlE~Hcs~~qQ-----~~ma~~l~~i~Gd~L~~~~~-----~~~--- 235 (561)
|+.++|.+||+.||+++ |..++|||||.||.|++...| .++++.++++||++||+|+. +.+
T Consensus 94 dL~t~Tt~~tL~~CL~~IK~WsdahPsh~PViI~LE~K~t~~~~~g~~p~~lDaeI~~vFGd~L~tPddvrG~~~TL~eA 173 (339)
T 3h4x_A 94 ELRTKSRDQDFAGCLSDMRAWHDAHPGHRPILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEA 173 (339)
T ss_dssp GTTCSCCCCCHHHHHHHHHHHHHHSTTCCCEEEEEEETTCCBGGGTBSHHHHHHHHHHHHGGGBCCHHHHHTTSSSHHHH
T ss_pred ccccCCCCcCHHHHHHHHHHHHHhCCCCCceEEEEecccCcccccCcCHHHHHHHHHHHhccceEcchhhcccccCHHHH
Confidence 67899999999999999 889999999999999987665 88999999999999999862 222
Q ss_pred ---CCCCChhhccCcEEEec
Q 008582 236 ---KEFPSPESLKRRIIIST 252 (561)
Q Consensus 236 ---~~lPSP~~Lk~KIlik~ 252 (561)
..+|||++|||||||--
T Consensus 174 Vla~GWPSl~slRGKVlf~L 193 (339)
T 3h4x_A 174 VRAGGWPSRADLAGKFLFEL 193 (339)
T ss_dssp HHHHCCCBTGGGTTCEEEEE
T ss_pred HhcCCCCChHHhCCCEEEEE
Confidence 34999999999999864
|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.4e-17 Score=146.43 Aligned_cols=119 Identities=21% Similarity=0.286 Sum_probs=100.2
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC---CceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p---ela~L 506 (561)
..+.|.|+|++|++|+.. +. +.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+ ....|
T Consensus 5 ~~g~L~v~v~~a~~L~~~------~~-g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l 72 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKT------KF-GKPDPIVSVIFKD-----EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSL 72 (140)
T ss_dssp BCCEEEEEEEEEESCCCC------SS-SCCCEEEEEECSS-----CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEE
T ss_pred CCcEEEEEEEEeeCCCCC------CC-CCCCeEEEEEECC-----EeEEeeeecCCCCCccCcEEEEEecccccCCCCEE
Confidence 346899999999999642 33 6689999999874 478999999999999999999998754 34789
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC------ceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G------yR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+|.|||+|..+++++||++.++|..|..| |+++||.+..|.... ++|.|++.|.
T Consensus 73 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~-G~l~l~~~~~ 132 (140)
T 2dmh_A 73 GIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTG-ATIDLVIGYD 132 (140)
T ss_dssp EEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEE-EEEEEEEEEC
T ss_pred EEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCC-CEEEEEEEEE
Confidence 99999999888899999999999999777 455679998887654 6999999884
|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=9.5e-17 Score=144.23 Aligned_cols=121 Identities=21% Similarity=0.334 Sum_probs=102.1
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 508 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf 508 (561)
+..+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||++++++.||.|||+|.|.+..+. ..|+|
T Consensus 10 ~~~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~-~~l~i 77 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEV 77 (133)
T ss_dssp CCSEEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEE
T ss_pred CCceEEEEEEEeeECCCC------CCCCCCcCeEEEEEECC-----EEEEeeeecCCCCCccccEEEEEecCCC-CEEEE
Confidence 446799999999999963 23456789999999964 4779999999999999999999987543 67999
Q ss_pred EEEecCCCCCCcceEEEEEeCcccCCCce-EEEccCCCCCcccCeEEEEEEEEC
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~~GyR-~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.|||+|..+++++||++.++|..+..|.. +.+|.+..++....++|.|+++|+
T Consensus 78 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 78 TVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEEEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EEEECCCCCCCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEE
Confidence 99999988789999999999999998875 559988877656667999999874
|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A | Back alignment and structure |
|---|
Probab=99.68 E-value=8.5e-16 Score=141.21 Aligned_cols=125 Identities=26% Similarity=0.352 Sum_probs=98.3
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC--ceeeecccCCCCCCCccccEEEEeeecCCceEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d--~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~L 506 (561)
+....|+|+|++|++|+. .+..+.+||||+|.+.+. .+ ..++||++++++.||+|||+|.|.+..+ ...|
T Consensus 17 ~~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l 88 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAK------KDILGASDPYVRVTLYDP-MNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRL 88 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------------CCEEEEEEEEET-TTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEE
T ss_pred CCccEEEEEEEEeeCCCC------CCCCCCCCcEEEEEEECC-CCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEE
Confidence 456789999999999963 233466899999999852 22 3567999999999999999999998754 3679
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc---------eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---------R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+|.|||+|..+++++||++.++|..+..+- ++.+|....+..-..+.|.+.+.|+
T Consensus 89 ~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 89 LFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp EEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred EEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 999999998888999999999999986543 7889987655444557999999985
|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.3e-16 Score=138.98 Aligned_cols=119 Identities=22% Similarity=0.324 Sum_probs=93.0
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+.. ...+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..++...|+|.||
T Consensus 3 ~~L~v~v~~a~~L~~~---~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~ 77 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEEEeeeCCCCC---CccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEE
Confidence 5799999999999631 001334678999999997643 36789999999999999999999997777889999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|+|.. ++++||++.++|..|..|+++...++..+ .+.+.++|++
T Consensus 78 d~d~~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~----~~~g~i~~~l 121 (126)
T 1rlw_A 78 DANYV-MDETLGTATFTVSSMKVGEKKEVPFIFNQ----VTEMVLEMSL 121 (126)
T ss_dssp ECCSS-CCEEEEEEEEEGGGSCTTCEEEEEEEETT----TEEEEEEEEE
T ss_pred ECCCC-CCceeEEEEEEHHHccCCCcEEEEEEcCC----CceEEEEEEE
Confidence 99976 49999999999999999997543333222 2456666554
|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=136.92 Aligned_cols=118 Identities=17% Similarity=0.293 Sum_probs=96.2
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
.+|+|+|++|.+|+. .+..+.+||||+|.+.+. ..++||++++++.||+|||+|.|.+..++. |.|.||
T Consensus 5 ~~L~V~v~~a~~L~~------~d~~g~sDpyv~v~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~~--l~~~v~ 73 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAK------KDFFRLPDPFAKIVVDGS---GQCHSTDTVKNTLDPKWNQHYDLYVGKTDS--ITISVW 73 (132)
T ss_dssp EEEEEEEEEEESCCC------CSTTCCCCEEEEEEETTT---CCEEECCCCSSCSSCEEEEEEEEEEETTCC--EEEEEE
T ss_pred EEEEEEEEEeECCCC------CCCCCCcCeEEEEEECCC---CceEECCccCCCCCCCccCEEEEEeCCCCE--EEEEEE
Confidence 579999999999963 244567899999998642 357899999999999999999999876643 999999
Q ss_pred ecCCCCC---CcceEEEEEeCccc----CCCceEEEccCCCC--CcccCeEEEEEEEE
Q 008582 512 EYDMSEK---DDFGGQTCLPVSEL----KQGIRAVPLHDRKG--ERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~---dd~iGq~~lpL~~L----~~GyR~ipL~d~~G--~~~~~atLlv~~~f 560 (561)
|+|..++ +++||++.+|+..| ..|+++++|....+ ..-..+.|.|+++.
T Consensus 74 d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 74 NHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred ECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 9997765 79999999999988 78899999987633 22234689998864
|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-15 Score=137.54 Aligned_cols=118 Identities=27% Similarity=0.380 Sum_probs=97.8
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.+.|+|+|++|++|+. .+..+.+||||+|.+. ..++||+++.++.||.|||+|.|.+..++ ..|+|.|
T Consensus 16 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~-----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v 83 (148)
T 3kwu_A 16 SAKISITVVCAQGLQA------KDKTGSSDPYVTVQVG-----KTKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRV 83 (148)
T ss_dssp CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEET-----TEEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEE
T ss_pred ccEEEEEEEeeeCCCC------CCCCCCcCeEEEEEEC-----CEEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEE
Confidence 4789999999999964 2345678999999984 26789999999999999999999997665 6799999
Q ss_pred EecCCC-----------CCCcceEEEEEeCcccCCCc-eEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~-----------~~dd~iGq~~lpL~~L~~Gy-R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||.|.. +++++||++.+||..+..+. ++.+|....+..-..+.|.++++|
T Consensus 84 ~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~ 145 (148)
T 3kwu_A 84 LDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISV 145 (148)
T ss_dssp EECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEE
T ss_pred EECCCCccccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEE
Confidence 999975 67999999999999997766 467998665555455689998887
|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-16 Score=141.72 Aligned_cols=114 Identities=20% Similarity=0.227 Sum_probs=95.0
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|.|+|++|.+|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 14 ~~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~ 87 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKA------MDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTII 87 (138)
T ss_dssp TTTEEEEEEEEEESCCC------CBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEE
T ss_pred CCCeEEEEEEEeeCCCC------cCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEE
Confidence 45789999999999964 234567899999999865444457899999999999999999999876665 6899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
|.|||.|..+++++||++.++|.++..|++|+ +|.+..|+++
T Consensus 88 ~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 130 (138)
T 3n5a_A 88 ITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPV 130 (138)
T ss_dssp EEEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCE
T ss_pred EEEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeE
Confidence 99999998888999999999999998888765 7777666654
|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.6e-15 Score=140.59 Aligned_cols=124 Identities=25% Similarity=0.342 Sum_probs=95.7
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC-ceeeecccCCCCCCCccccEEEEeeecCCceEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d-~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~ 509 (561)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||.|||+|.|.+... ...|+|.
T Consensus 7 ~g~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~ 79 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAK------KDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFE 79 (176)
T ss_dssp CEEEEEEEEEEESCC---------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEE
T ss_pred cEEEEEEEEEeeCCCC------cCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEE
Confidence 4689999999999963 234567899999999863211 1467999999999999999999998743 4679999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCc---------eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~Gy---------R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|||+|..+++++||++.++|..|..+. ++.+|....+.....+.|.|++.|+
T Consensus 80 V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~ 140 (176)
T 3m7f_B 80 VFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 140 (176)
T ss_dssp EEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred EEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEE
Confidence 999998888999999999999997652 6789987655555567999999885
|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.9e-15 Score=133.65 Aligned_cols=106 Identities=19% Similarity=0.202 Sum_probs=87.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCC--ceEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pe--la~Lr 507 (561)
.+.|.|+|++|++|+. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|. +...+ ...|+
T Consensus 19 ~~~L~V~V~~a~~L~~-------~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~ 91 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT-------EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQ 91 (134)
T ss_dssp TTEEEEEEEEEECCCC-------TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEE
T ss_pred CCEEEEEEEEeeCCCC-------CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEE
Confidence 3689999999999973 22456899999999754434567899999999999999999999 76443 36899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccC
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 543 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d 543 (561)
|.|||+|..+++++||++.+||..+..|. +|.+|.+
T Consensus 92 ~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 92 LSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 99999998888999999999999998875 3556654
|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.8e-15 Score=141.27 Aligned_cols=113 Identities=20% Similarity=0.271 Sum_probs=89.0
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
....|.|+|++|.+|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 35 ~~~~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 108 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAA------MDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLD 108 (166)
T ss_dssp TTTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEE
T ss_pred CCCEEEEEEEEeECCCC------ccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEE
Confidence 35689999999999964 234567899999999865444568899999999999999999999876554 4899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGER 548 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~ 548 (561)
|.|||+|..+++++||++.++|..+..+++++ +|.+..+++
T Consensus 109 i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~ 150 (166)
T 2cm5_A 109 ISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKK 150 (166)
T ss_dssp EEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCC
T ss_pred EEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCc
Confidence 99999998888999999999999986655433 555444443
|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=8.4e-15 Score=134.68 Aligned_cols=107 Identities=22% Similarity=0.273 Sum_probs=88.3
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
....|+|+|++|++|+. .+..+.+||||+|.+.. .+..++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 40 ~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 111 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLV 111 (152)
T ss_dssp TTTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEET--TCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEE
T ss_pred CCCEEEEEEEEeECCCC------ccCCCCcCeEEEEEEEc--CCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEE
Confidence 45689999999999964 23456789999999973 33457799999999999999999999875543 6899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCC
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 544 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~ 544 (561)
|.|||+|..+++++||++.++|..+..|. +|.+|.+.
T Consensus 112 i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 112 MAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp EEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred EEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 99999998888999999999999998875 45677653
|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-15 Score=140.76 Aligned_cols=115 Identities=18% Similarity=0.152 Sum_probs=89.9
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
+....|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|
T Consensus 27 ~~~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l 100 (153)
T 1w15_A 27 STTNTLTVVVLKARHLPK------SDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISV 100 (153)
T ss_dssp TTTTEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEE
T ss_pred CCCCEEEEEEEEeECCCC------cCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEE
Confidence 345789999999999964 233456899999999753322347799999999999999999999877665 689
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
+|.|||+|..+++++||++.++|.....|++++ +|.+..++++
T Consensus 101 ~v~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~~ 144 (153)
T 1w15_A 101 EFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQI 144 (153)
T ss_dssp EEEEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCE
T ss_pred EEEEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCee
Confidence 999999998888999999999999977777654 6666555543
|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-15 Score=138.85 Aligned_cols=105 Identities=20% Similarity=0.283 Sum_probs=86.9
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
+..+.|.|+|++|.+|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|
T Consensus 22 ~~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l 95 (159)
T 1tjx_A 22 PTAGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQV 95 (159)
T ss_dssp TTTTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEE
T ss_pred CCCCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEE
Confidence 345789999999999964 234567899999999754333357899999999999999999999876654 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV 539 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i 539 (561)
+|.|||+|..+++++||++.+++.++..|++|+
T Consensus 96 ~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w 128 (159)
T 1tjx_A 96 VVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHW 128 (159)
T ss_dssp EEEEEECCSSSCCEEEEEEEEETTCCHHHHHHH
T ss_pred EEEEEECCCCCCCceEEEEEECCCCCCcHHHHH
Confidence 999999998888999999999999887777665
|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=5.7e-15 Score=132.82 Aligned_cols=116 Identities=22% Similarity=0.332 Sum_probs=94.4
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCC-CCCCCccccEEEEeeecCCceEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~-nn~nP~WNE~f~F~v~~pela~Lrf~ 509 (561)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||++++ ++.||+|||+|.|.+.. ....|+|.
T Consensus 9 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~ 76 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAK 76 (136)
T ss_dssp EEEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEE
T ss_pred cEEEEEEEEeccCCCC------cccCCCcCceEEEEECC-----ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEE
Confidence 4689999999999964 23446789999999864 367999998 78999999999999875 45679999
Q ss_pred EEecCCCCCCcceEEEEEeCccc-CCC---ceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSEL-KQG---IRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L-~~G---yR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|||+|..+++++||++.++|..+ ..| .++.+|. ..++ ..+.|.+.+.|.
T Consensus 77 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~--~~G~i~l~l~~~ 129 (136)
T 1wfj_A 77 IFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE--YKGEIWVALSFK 129 (136)
T ss_dssp ECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE--EEEEEEEEEEEE
T ss_pred EEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc--cCEEEEEEEEEE
Confidence 99999888899999999999998 555 4577887 4443 345888888873
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=5.8e-15 Score=139.37 Aligned_cols=117 Identities=19% Similarity=0.220 Sum_probs=94.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
..+|+|+|++|++|+.. .+ .+.+||||+|.+.+ .++||+++++++||+|||+|.|.+. +...|+|.|
T Consensus 35 ~~~L~V~V~~A~~L~~~-----~~-~~~sDPYv~v~~~~-----~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V 101 (173)
T 2nq3_A 35 KSQLQITVISAKLKENK-----KN-WFGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFRV 101 (173)
T ss_dssp CEEEEEEEEEEEECCCC--------CCCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEEE
T ss_pred ceEEEEEEEEeECCCCc-----cc-CCCCCeEEEEEECC-----EEeEccccCCCCCCeECCEEEEEeC--CCCEEEEEE
Confidence 46899999999999621 11 22379999999964 6789999999999999999999874 367899999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc--------eEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI--------RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy--------R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||+|..+++++||++.++|..+..|+ .+++|...++.....+.|.|.+++
T Consensus 102 ~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 102 WSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 159 (173)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred EECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEee
Confidence 99998888999999999999986542 377887765544445689888875
|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.4e-15 Score=136.94 Aligned_cols=118 Identities=20% Similarity=0.151 Sum_probs=90.6
Q ss_pred CceEEEEEEEecCCCCCCCC-C--ccC-CCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPH-T--HFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 506 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~-~--~~~-~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~L 506 (561)
.+.|+|+|+.|++|+..... . .+. ..+.+||||+|.+.+ ....||+++.+++||+|||+|.|.+.. ...|
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~----~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L 101 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ----VRVGQTSTKQKTNKPTYNEEFCANVTD--GGHL 101 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEE--ECEE
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC----EeeEEeeecCCCCCCccCcEEEEEcCC--CCEE
Confidence 46899999999999632000 0 000 124579999999853 234689999999999999999999864 3579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC-------ceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G-------yR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.|.|||+|..++|++||++.|||..|..| -.|++|.. .+.|.|+++|.
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEEE
Confidence 99999999888899999999999998754 35778853 45889998873
|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=132.04 Aligned_cols=101 Identities=24% Similarity=0.383 Sum_probs=84.5
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pel--a~L 506 (561)
....|.|+|++|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|. +...++ ..|
T Consensus 27 ~~~~L~V~v~~a~~L~~~------d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l 100 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPM------DSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTL 100 (142)
T ss_dssp GGTEEEEEEEEEESCCCC------CTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEE
T ss_pred CCCEEEEEEEEecCCCCC------CCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEE
Confidence 356899999999999742 33567899999999864444568899999999999999999998 554443 589
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
+|.|||+|..+++++||++.++|..+..|.
T Consensus 101 ~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 101 RISVCDEDKFGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEGGGCCTTC
T ss_pred EEEEEECCCCCCCcEEEEEEEEHHHcCCCC
Confidence 999999998888999999999999998765
|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-14 Score=130.11 Aligned_cols=113 Identities=17% Similarity=0.241 Sum_probs=89.5
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~pel--a~L 506 (561)
....|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+ ...++ ..|
T Consensus 19 ~~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l 92 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERML 92 (141)
T ss_dssp TTTEEEEEEEEEESCCC------CSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEE
T ss_pred CCCEEEEEEEEccCCCC------cCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEE
Confidence 45789999999999964 2345678999999986544345678999999999999999999995 33333 689
Q ss_pred EEEEEecCCCCC--CcceEEEEEeCcccCC-Cc-eEEEccCCCCCc
Q 008582 507 RIEVHEYDMSEK--DDFGGQTCLPVSELKQ-GI-RAVPLHDRKGER 548 (561)
Q Consensus 507 rf~V~D~d~~~~--dd~iGq~~lpL~~L~~-Gy-R~ipL~d~~G~~ 548 (561)
+|.|||++..++ +++||++.++|..+.. +. +|.+|.+.+..+
T Consensus 93 ~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~~~g~ 138 (141)
T 1v27_A 93 EITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDSGP 138 (141)
T ss_dssp EEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCCSSCC
T ss_pred EEEEEECCCCcCCCCceEEEEEEEccccCCCCCCceEECcccccCC
Confidence 999999998776 8999999999998743 33 577998765543
|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-14 Score=131.35 Aligned_cols=105 Identities=23% Similarity=0.271 Sum_probs=86.8
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
....|.|+|++|++|+. .+..+.+||||+|.+.. .+..++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 32 ~~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 103 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLV 103 (143)
T ss_dssp TTTEEEEEEEEEECCCC------BGGGBCCCEEEEEEEES--CCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEE
T ss_pred CCCEEEEEEEEecCCCC------CCCCCCcCcEEEEEEEC--CCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEE
Confidence 45789999999999963 23456789999999953 33457899999999999999999999875544 6899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCce---EEEcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR---~ipL~ 542 (561)
|.|||+|..+++++||++.++|..+..|.. |.+|.
T Consensus 104 i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 104 MAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp EEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred EEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 999999988889999999999999988753 45654
|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.9e-15 Score=134.15 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=90.0
Q ss_pred CCceEEEEEEEecCCCCCCCCCccC-CCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~-~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
..+.|.|+|++|.+|+.. + ..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|
T Consensus 21 ~~~~L~V~v~~a~~L~~~------d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L 94 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYA------DEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTL 94 (148)
T ss_dssp TTTEEEEEEEEEESCCCS------BTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEE
T ss_pred CCCEEEEEEEEecCCCCc------ccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEE
Confidence 457899999999999632 2 3456899999999754444557899999999999999999999876654 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGER 548 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~ 548 (561)
+|.|||+|..+++++||++.+||..+..|. .|.+|....+..
T Consensus 95 ~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~~ 139 (148)
T 3fdw_A 95 QFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAE 139 (148)
T ss_dssp EEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC----
T ss_pred EEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccccc
Confidence 999999998888999999999999987553 577888765554
|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=131.34 Aligned_cols=111 Identities=18% Similarity=0.247 Sum_probs=87.3
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
....|.|+|++|++|+. .+..+ +||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 22 ~~~~L~v~v~~a~~L~~------~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 94 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIA------FSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLD 94 (142)
T ss_dssp TTTEEEEEEEEEECCCC------SSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEE
T ss_pred CCCEEEEEEEEeECCCC------CCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEE
Confidence 45689999999999964 23345 899999999754434467899999999999999999999865444 4899
Q ss_pred EEEEecCCCCC--CcceEEEEEeCcccCCC--c-eEEEccCCCCC
Q 008582 508 IEVHEYDMSEK--DDFGGQTCLPVSELKQG--I-RAVPLHDRKGE 547 (561)
Q Consensus 508 f~V~D~d~~~~--dd~iGq~~lpL~~L~~G--y-R~ipL~d~~G~ 547 (561)
|.|||+|..+. +++||++.++|..+..+ . +|.+|.+..++
T Consensus 95 i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 95 VAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGP 139 (142)
T ss_dssp EEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSC
T ss_pred EEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCC
Confidence 99999997653 57999999999998654 3 35577766543
|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=130.88 Aligned_cols=116 Identities=16% Similarity=0.168 Sum_probs=87.1
Q ss_pred ceEEEEEEEecCCCCCCCCCc--c---CCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTH--F---DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 506 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~--~---~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~L 506 (561)
+.|+|+|++|++|+....... + .....+||||+|.+.+ ....+|+++.++.||+|||+|.|.+..+ ..|
T Consensus 6 g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~----~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 6 GLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred eEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC----eEeeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 689999999999963200000 0 0012379999999853 2346899999999999999999998654 689
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC-c----eEEEccCCCCCcccCeEEEEEEEE
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG-I----RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G-y----R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
+|.|||+|..+++++||++.+||..+..+ + .|++|.. .+.|.++++|
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-------~G~i~l~l~~ 131 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDL 131 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-------CeEEEEEEEE
Confidence 99999999888899999999999998753 3 3455532 3578888876
|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-14 Score=130.54 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=86.3
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC---CceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p---ela~L 506 (561)
....|+|+|++|++|+.. +..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+ ....|
T Consensus 24 ~~~~L~v~v~~a~~L~~~------d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l 95 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAK------DFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRIL 95 (141)
T ss_dssp SSCCEEEEEEEEESCCCC------SSSSCCCEEEEEEEES--CCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEE
T ss_pred CCCEEEEEEEEeECCCCC------CCCCCCCcEEEEEEEC--CCCccEeCceEcCCCCCccccEEEECccCHHHcccCEE
Confidence 457899999999999642 3456789999999974 334578999999999999999999985321 23679
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 544 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~ 544 (561)
+|.|||+|..+++++||++.++|..+..|. +|.+|...
T Consensus 96 ~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 96 YLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred EEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 999999998888999999999999998775 35566543
|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=131.09 Aligned_cols=107 Identities=26% Similarity=0.421 Sum_probs=88.9
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~V 510 (561)
..|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|+|.|
T Consensus 31 ~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 104 (149)
T 1a25_A 31 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI 104 (149)
T ss_dssp SEEEEEEEEEESCCC------CSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred CEEEEEEEEeeCCCC------CCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEE
Confidence 579999999999964 234567899999999865444567899999999999999999999876544 5799999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc--eEEEccCC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI--RAVPLHDR 544 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy--R~ipL~d~ 544 (561)
||+|..+++++||++.++|..|..+- +|.+|.+.
T Consensus 105 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~ 140 (149)
T 1a25_A 105 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 140 (149)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBCH
T ss_pred EECCCCCCCCEEEEEEEEHHHhCcCccCCeEEccCC
Confidence 99998888999999999999987653 46688763
|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.4e-14 Score=128.94 Aligned_cols=117 Identities=15% Similarity=0.170 Sum_probs=87.3
Q ss_pred CCCceEEEEEEEecCCCCCCCCCc-cCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTH-FDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--AL 505 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~-~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~ 505 (561)
+....|.|+|++|++|+....... .+..+.+||||+|.+.. ....++||++++++.||+|||+|.|.+..+++ ..
T Consensus 23 ~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP--DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET--CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe--CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 345789999999999974100000 12345789999999974 22357799999999999999999999875544 38
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccCCCc--eEEEccCCCCC
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELKQGI--RAVPLHDRKGE 547 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy--R~ipL~d~~G~ 547 (561)
|+|.|||+|..+++++||++.++|..+..+- .++..+.+.+.
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 144 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSGP 144 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCCCC
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecCCC
Confidence 9999999998888999999999999986543 34433334443
|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.8e-14 Score=124.94 Aligned_cols=106 Identities=18% Similarity=0.236 Sum_probs=80.0
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeee-cCC--ceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS-VPE--LALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~-~pe--la~L 506 (561)
..+.|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+. ..+ ...|
T Consensus 16 ~~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l 89 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERML 89 (129)
T ss_dssp TTTEEEEEEEEEESCCC------CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEE
T ss_pred CCCEEEEEEEEeeCCCC------CCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeE
Confidence 34689999999999964 23456689999999976444457889999999999999999999953 222 3689
Q ss_pred EEEEEecCCCCC--CcceEEEEEeCcccCC-Cc-eEEEc
Q 008582 507 RIEVHEYDMSEK--DDFGGQTCLPVSELKQ-GI-RAVPL 541 (561)
Q Consensus 507 rf~V~D~d~~~~--dd~iGq~~lpL~~L~~-Gy-R~ipL 541 (561)
+|.|||+|..++ +++||++.+||..+.. |. +|.+|
T Consensus 90 ~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L 128 (129)
T 2bwq_A 90 EITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 128 (129)
T ss_dssp EEEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred EEEEEECCcCcCcCCceeEEEEEEccccCCCcCCccEEC
Confidence 999999998776 9999999999998743 32 34454
|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=7e-14 Score=126.58 Aligned_cols=107 Identities=20% Similarity=0.198 Sum_probs=85.6
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
....|+|+|+.|++. +..+.+||||+|.+.+. ....++||+++++++||+|||+|.|.+...++ ..|+
T Consensus 24 ~~~~L~V~v~~a~~~---------d~~g~sDPyv~v~l~~~-~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~ 93 (138)
T 1wfm_A 24 QKAELFVTRLEAVTS---------NHDGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLT 93 (138)
T ss_dssp TTTEEEEEEEEEECC---------CCSSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEE
T ss_pred CCCEEEEEEEEEEcC---------CCCCCcceEEEEEEEcC-CCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEE
Confidence 346899999999832 33467899999999631 12346799999999999999999999876654 5899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCC--c-eEEEccCCCC
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQG--I-RAVPLHDRKG 546 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~G--y-R~ipL~d~~G 546 (561)
|.|||+|..+++++||++.++|..+..+ . .|.+|.....
T Consensus 94 ~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 94 LTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp EEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred EEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 9999999888999999999999999543 3 4668876543
|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-14 Score=134.43 Aligned_cols=98 Identities=19% Similarity=0.214 Sum_probs=81.9
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC-ceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d-~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
..+.|+|+|+.|++|+.. +..+.+||||+|.+.+...+ ..++||+++++++||+|||+|.|.+...++ ..|
T Consensus 41 ~~~~L~V~Vi~a~~L~~~------d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L 114 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSAL------LQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTL 114 (155)
T ss_dssp TTTEEEEEEEEEECGGGT------CCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEE
T ss_pred CCCEEEEEEEEccCcCCc------ccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEE
Confidence 346899999999999642 34567899999999753323 247899999999999999999999875443 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
+|.|||+|..+++++||++.++|..+.
T Consensus 115 ~~~V~d~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 115 RVDVCTTDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECTTSC
T ss_pred EEEEEECCCCCCCcEEEEEEEEHHHcc
Confidence 999999999889999999999999985
|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.9e-14 Score=129.75 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=88.4
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRI 508 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf 508 (561)
..+.|.|+|++|.+|+.. + .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 25 ~~~~L~V~v~~a~~L~~~------d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i 97 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISK------Q-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLV 97 (153)
T ss_dssp SSSEEEEEEEEEESCCCC------S-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEE
T ss_pred CCCEEEEEEEEeeCCCCC------C-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEE
Confidence 457899999999999642 2 356899999999865545667899999999999999999999854433 45999
Q ss_pred EEEecCCCCC-CcceEEEEEeCcccCC-Cc---eEEEccCCCC
Q 008582 509 EVHEYDMSEK-DDFGGQTCLPVSELKQ-GI---RAVPLHDRKG 546 (561)
Q Consensus 509 ~V~D~d~~~~-dd~iGq~~lpL~~L~~-Gy---R~ipL~d~~G 546 (561)
.|||.|..++ +++||++.++|..|.. +- .|.+|.+...
T Consensus 98 ~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 98 TVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL 140 (153)
T ss_dssp EEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred EEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence 9999998766 8999999999999874 32 4668876544
|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.7e-14 Score=126.78 Aligned_cols=98 Identities=21% Similarity=0.357 Sum_probs=81.6
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCC-CCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCCc--eE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--AL 505 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~-~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pel--a~ 505 (561)
....|.|+|++|++|+.. +.. +.+||||+|.+.+ ....++||++++++.||+|||+|.|. +...++ ..
T Consensus 20 ~~~~L~v~v~~a~~L~~~------d~~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~ 91 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAM------DEQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELA 91 (138)
T ss_dssp GGTEEEEEEEEEESCCCC------BTTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCE
T ss_pred CCCEEEEEEEEeeCCCCC------CCCCCCCCCEEEEEEec--CCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCE
Confidence 346899999999999642 332 5689999999974 23467899999999999999999995 665544 58
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|+|.|||+|..+++++||++.++|..+..+
T Consensus 92 l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 92 LHFTILSFDRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp EEEEEEEECSSCCCCCCEEEEEECTTCCCT
T ss_pred EEEEEEECCCCCCCcEEEEEEEehhHccCC
Confidence 999999999888899999999999999765
|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-14 Score=130.90 Aligned_cols=109 Identities=19% Similarity=0.305 Sum_probs=87.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC---------ceeeecccCCCCCCCccccEEEEe-eecC
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD---------TVMKKTKTLEDNWIPSWNEEFEFP-LSVP 501 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d---------~~k~kTkvi~nn~nP~WNE~f~F~-v~~p 501 (561)
+.|+|+|++|++|+. .+..+.+||||+|.+.+.+.. ..++||++++++.||+|||+|.|. +...
T Consensus 18 ~~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~ 91 (142)
T 1rh8_A 18 GNLIIHILQARNLVP------RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME 91 (142)
T ss_dssp TEEEEEEEEEESCCC------CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred CEEEEEEEEecCCCC------CCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHH
Confidence 579999999999964 234567899999999764322 235789999999999999999997 5543
Q ss_pred C--ceEEEEEEEecCCCCCCcceEEEEEeCcccCCC---ceEEEccCCCC
Q 008582 502 E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG 546 (561)
Q Consensus 502 e--la~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d~~G 546 (561)
+ ...|+|.|||+|..+++++||++.++|..+..| -+|.+|.+..+
T Consensus 92 ~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred HccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 2 358999999999888899999999999988654 47889987654
|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.6e-14 Score=132.02 Aligned_cols=107 Identities=21% Similarity=0.196 Sum_probs=86.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCC-CCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~-~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
+.|.|+|+.|++|+.. +. .+.+||||+|.+.+.+....++||+++++++||+|||+|.|.+.. +...|+|.|
T Consensus 30 ~~L~V~v~~a~~L~~~------d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V 102 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQK------PGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIV 102 (171)
T ss_dssp TEEEEEEEEEESCCCC------C---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEE
T ss_pred CEEEEEEEEeeCCCCC------CcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEE
Confidence 5899999999999642 22 466899999999864333347899999999999999999999854 457899999
Q ss_pred E-ecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCC
Q 008582 511 H-EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 545 (561)
Q Consensus 511 ~-D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~ 545 (561)
| |+|..+++++||++.++|..+..|. +|.+|....
T Consensus 103 ~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 103 WGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp EEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred EEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 9 9998888999999999999997654 466887543
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=8.3e-13 Score=133.27 Aligned_cols=123 Identities=21% Similarity=0.268 Sum_probs=96.2
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|.|+|++|++|+. .+..+.+||||+|.+.+ .+..+++|++++++.||.|||+|.|.+..+++ ..|+
T Consensus 17 ~~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~ 88 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLV 88 (284)
T ss_dssp TTTEEEEEEEEEECCCC------CSSSSSCCEEEEEEEET--CTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEE
T ss_pred CCCEEEEEEEEeeCCCC------CCCCCCCCeEEEEEEEc--CCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEE
Confidence 45789999999999964 23456789999999864 23357789999999999999999999876554 6899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCC-cccCeEEEEEEEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGE-RYKSVKLLMHFEF 560 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~-~~~~atLlv~~~f 560 (561)
|.|||.|..+++++||++.++|..+..|. .+.+|.+..+. .-..+.|.+.+.|
T Consensus 89 ~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~ 145 (284)
T 2r83_A 89 MAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRY 145 (284)
T ss_dssp EEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEE
T ss_pred EEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEe
Confidence 99999998888999999999999997764 46688775442 2223456665554
|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-13 Score=124.10 Aligned_cols=113 Identities=18% Similarity=0.225 Sum_probs=94.6
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCC-CCCCCccccEEEEeeecCC--ceEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPE--LALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~-nn~nP~WNE~f~F~v~~pe--la~Lr 507 (561)
..-|+|+|.+|.+|+ +.+|||++|.+.| .++|||++. ++.||+|||.|.|.+.-+- ..+|.
T Consensus 20 ~msL~V~l~~a~~Lp-----------g~~Dp~akv~FRg-----~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~ 83 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----------GRADRIAKVTFRG-----QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLE 83 (144)
T ss_dssp CEEEEEEEEEEESCC-----------SCEEEEEEEEETT-----EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEE
T ss_pred cEEEEEEEEEecCCC-----------CCCCCeEEEEEec-----cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEE
Confidence 456999999999996 2469999999976 688999998 5799999999999986433 36899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc-e--EEEccCCCCCcccCeEEEEEEEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI-R--AVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy-R--~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.|+|++..+++++||.+++||..|..+= . ..+|.|.++++++ |+|.+.+.|
T Consensus 84 v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~-a~I~l~l~Y 138 (144)
T 3l9b_A 84 IQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIK-TSLSMEVRY 138 (144)
T ss_dssp EEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEE-EEEEEEEEE
T ss_pred EEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccc-cEEEEEEEe
Confidence 99999999999999999999999875443 2 3599999999986 677776654
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=4.6e-13 Score=135.13 Aligned_cols=104 Identities=19% Similarity=0.261 Sum_probs=86.0
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
....|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 148 ~~~~l~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~ 221 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVV 221 (284)
T ss_dssp TTTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEE
T ss_pred cCCceEEEEEEeECCCC------cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEE
Confidence 45689999999999964 234567899999999753333356799999999999999999999977665 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV 539 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i 539 (561)
|.|||+|..+++++||++.+++.++..|++|+
T Consensus 222 i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w 253 (284)
T 2r83_A 222 VTVLDYDKIGKNDAIGKVFVGYNSTGAELRHW 253 (284)
T ss_dssp EEEEECCSSSCCCEEEEEEEETTCCHHHHHHH
T ss_pred EEEEeCCCCCCCcEEEEEEECCCCCCcHHHHH
Confidence 99999998889999999999999877666654
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2e-12 Score=131.82 Aligned_cols=123 Identities=22% Similarity=0.265 Sum_probs=93.3
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCce--EEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela--~Lr 507 (561)
..+.|.|+|++|++|+. .+..+.+||||+|.+. |....++||++++++.||+|||+|.|.+..+++. .|+
T Consensus 18 ~~~~L~v~v~~a~~L~~------~d~~g~~dPyv~v~l~--~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 89 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPA------KDSNGFSDPYVKIYLL--PDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLH 89 (296)
T ss_dssp SSCEEEEEEEEEECCCC------CSTTSCCCEEEEEECT--TSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCE
T ss_pred CCCEEEEEEEEeECCCC------cCCCCCcCeEEEEEEE--cCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEE
Confidence 45689999999999974 2345678999999985 3334678999999999999999999998766643 799
Q ss_pred EEEEecCCCCCCcceEEEEEe-CcccC---CC-ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLP-VSELK---QG-IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lp-L~~L~---~G-yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.|||.|..+++++||++.++ +..+. .+ -.+.+|....+.....+.|.+.+.+
T Consensus 90 ~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y 147 (296)
T 1dqv_A 90 FSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCY 147 (296)
T ss_dssp EEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEE
T ss_pred EEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEe
Confidence 999999988889999999996 43332 23 2466787655544444567666554
|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=6.2e-13 Score=119.64 Aligned_cols=111 Identities=21% Similarity=0.237 Sum_probs=77.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCC-CCCCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~-nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
..|+|+|+.|++++. .+.+||||+|. + .+.||+++. ++.||+|||+|.|.+..++. .|+|.|
T Consensus 5 ~~L~V~V~~A~~l~~---------~g~~DPYv~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~V 67 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVKSTTIAVRGSQPSWEQDFMFEINRLDL-GLTVEV 67 (131)
T ss_dssp EEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEEECCCSS-EEEEEE
T ss_pred eEEEEEEEEeECCCC---------CCCcCeEEEEE--e-----cCEEEeEecCCCCCceECCEEEEEEeCCCC-eEEEEE
Confidence 579999999997631 24579999999 2 234566565 57999999999999976554 599999
Q ss_pred EecCCCCCCcceEEEEEeCcccC----CCc-eEEEcc----CCCCCcc-----cCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELK----QGI-RAVPLH----DRKGERY-----KSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~----~Gy-R~ipL~----d~~G~~~-----~~atLlv~~~f 560 (561)
||+| .++|++||++.+||..+. .|. ++.||. .++|+.. .+-.|++.+.|
T Consensus 68 ~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 68 WNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 9999 778999999999999884 232 444443 3444432 12357777666
|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B | Back alignment and structure |
|---|
Probab=99.35 E-value=2.4e-12 Score=140.56 Aligned_cols=114 Identities=21% Similarity=0.339 Sum_probs=93.4
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.+.|+|+|++|.+|+. .+..+.+||||+|.+.+ .+++|+++.++.||+|||+|.|.+..+....|+|.|
T Consensus 386 ~~~l~v~v~~a~~L~~------~d~~~~sdpyv~v~~~~-----~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v 454 (510)
T 3jzy_A 386 IGRLMVHVIEATELKA------CKPNGKSNPYCEISMGS-----QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTL 454 (510)
T ss_dssp CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEE
T ss_pred CceEEEEeceeecCCC------CCCCCCCCeEEEEEECC-----eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence 3689999999999963 23456789999999842 578999999999999999999999877778899999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc-------eEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI-------RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy-------R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||+|..+++++||++.+||..+..|. .+++|... ..+.|.|++++
T Consensus 455 ~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~-----~~G~i~l~~~l 506 (510)
T 3jzy_A 455 FDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV-----PTGEVWVRFDL 506 (510)
T ss_dssp EECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS-----SSCEEEEEEEE
T ss_pred EeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC-----CCceEEEEEEE
Confidence 99998888999999999999997653 46677643 23467666654
|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=4e-12 Score=119.22 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=69.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCC-CCCCCccccEEEEeeecCCceEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~-nn~nP~WNE~f~F~v~~pela~Lrf~ 509 (561)
...|+|+|+.|++++. .+.+||||+|. + .+.||+++. ++.||+|||+|.|.+..++. .|+|.
T Consensus 13 ~~~L~V~V~~A~~l~~---------~g~~DPYV~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~ 75 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVESTTIAVRGSQPSWEQDFMFEINRLDL-GLTVE 75 (167)
T ss_dssp CCEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEECCCTTS-EEEEE
T ss_pred eEEEEEEEEEEECCCC---------CCCCCeEEEEE--e-----cceEEEEecCCCCCCCCCCEEEEEeeCCCC-EEEEE
Confidence 3589999999997631 34579999999 2 234677766 57999999999999976544 59999
Q ss_pred EEecCCCCCCcceEEEEEeCcccC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
|||+| .++|++||++.+||..+.
T Consensus 76 V~D~d-~~~dd~iG~~~i~L~~l~ 98 (167)
T 2cjs_A 76 VWNKG-LIWDTMVGTVWIPLRTIR 98 (167)
T ss_dssp EEECC-SSCCEEEEEEEEEGGGSC
T ss_pred EEECC-CCCCceEEEEEEEHHHhc
Confidence 99999 778999999999999884
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
Probab=99.27 E-value=7.3e-13 Score=135.03 Aligned_cols=102 Identities=19% Similarity=0.227 Sum_probs=83.0
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|+|+|+.|++|+. .+..+.+||||+|.+...+....++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 150 ~~~~l~v~v~~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 223 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKA------MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLS 223 (296)
T ss_dssp TTTEEEEEEEEEESCCC------CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCC
T ss_pred ccceeEEEEEEeecCCc------cCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEE
Confidence 34689999999999963 234566799999998743333457899999999999999999999876553 4699
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCC-Cce
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQ-GIR 537 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~-GyR 537 (561)
|.|||+|..+++++||++.+++..+.. |++
T Consensus 224 i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~ 254 (296)
T 1dqv_A 224 IAVVDYDCIGHNEVIGVCRVGPEAADPHGRE 254 (296)
T ss_dssp CEEEECCSSSCCEEEEECCCSSCTTCHHHHH
T ss_pred EEEEeCCCCCCCceEEEEEECCccCCchhHH
Confidence 999999988899999999999998754 543
|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3.6e-12 Score=144.33 Aligned_cols=116 Identities=24% Similarity=0.373 Sum_probs=89.2
Q ss_pred cCCCCCC----CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe
Q 008582 422 FDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP 497 (561)
Q Consensus 422 l~P~~~~----p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~ 497 (561)
|+|.... +..+.|+|+|++|++|+.. ...+..+.+||||+|.+.+.+ ..++||+++++++||+|||+|.|.
T Consensus 4 fdP~~~~~ve~~~~g~L~V~Vi~A~nL~~~---~~~D~~g~sDPYV~V~l~~~~--~~k~kTkvik~tlNPvWNEtF~F~ 78 (749)
T 1cjy_A 4 IDPYQHIIVEHQYSHKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFI 78 (749)
T ss_dssp ---------CCCCCEEEEEEEEEEECCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEE
T ss_pred CCCCccccccCCCccEEEEEEEEEECCCCc---cccCCCCCcCeEEEEEEecCC--CCeEecceEcCCCCCeeeeEEEEE
Confidence 5664322 2356899999999999631 002334678999999987533 367899999999999999999999
Q ss_pred eecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCce---EEEccC
Q 008582 498 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHD 543 (561)
Q Consensus 498 v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR---~ipL~d 543 (561)
+..+....|+|.|||+|..+ +++||++.++|..|..|++ +.+|..
T Consensus 79 v~~~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 79 LDPNQENVLEITLMDANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp ECTTSCCBCEEEEEECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred ecCCCCCEEEEEEEECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 98777778999999999888 9999999999999999874 456653
|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.26 E-value=3e-11 Score=132.72 Aligned_cols=91 Identities=23% Similarity=0.306 Sum_probs=77.6
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeee-cCCceEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS-VPELALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~-~pela~Lrf~ 509 (561)
.+.|+|+|+.|++|+. |.++.+||||+|.+.+ .+.||+++++++||+|||+|.|.+. .+....|+|.
T Consensus 393 ~~~L~V~V~~A~~L~~-------D~~g~sDPYV~v~l~~-----~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~ 460 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-------DYTTATDAYLKVFFGG-----QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQ 460 (540)
T ss_dssp EEEEEEEEEEEESCCC-------SSCSCCCEEEEEEETT-----EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEE
T ss_pred ccEEEEEEEEccCCCc-------ccCCCcCeEEEEEECC-----EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEE
Confidence 3589999999999952 4457789999999964 4689999999999999999999864 4456779999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|||+|..++||+||++.++|. .|-
T Consensus 461 V~D~D~~~~dD~LG~~~~~L~---~g~ 484 (540)
T 3nsj_A 461 VWDADYGWDDDLLGSCDRSPH---SGF 484 (540)
T ss_dssp EEECCSSSCCEEEEEEEECCC---SEE
T ss_pred EEECCCCCCCCEEEEEEEEee---CCc
Confidence 999998888999999999987 465
|
| >2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=8.5e-10 Score=111.42 Aligned_cols=136 Identities=13% Similarity=0.289 Sum_probs=101.9
Q ss_pred CCCccceeecccccccccCCCC-------CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHH
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQL-------NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCL 184 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql-------~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi 184 (561)
+.||+++.|-.|||++..+... .+.+-...+..-|..|+|.++|+|++ +..++||... ...+|.||+
T Consensus 13 ~~~l~~l~ipGtHdS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~~-----~~~~~H~~~~-~~~~~~~~L 86 (274)
T 2plc_A 13 TTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKD-----NLNIYHGPIF-LNASLSGVL 86 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECT-----TSEEEETTEE-EEEEHHHHH
T ss_pred CCeeeeeeeeeecchhhccCCCccccccccccCCCcCHHHHHHhCCcEEEEEECC-----cEEEEEcCCC-CCCCHHHHH
Confidence 4799999999999997655321 12233345678899999999999992 4789999764 467999999
Q ss_pred HHHhhhccccCCCceEEEeccCCCHHHH-HHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecC
Q 008582 185 RSIKEYAFVASEYPVVITLEDHLTPDLQ-AKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTK 253 (561)
Q Consensus 185 ~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ-~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K 253 (561)
+.|+++.=..-.=.|||+|+++...+.. ..+++.+.+.||+.++.++. .....+|+++++||||+|-..
T Consensus 87 ~~i~~fL~~~P~EvVil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~pTL~e~rGK~vlv~~ 157 (274)
T 2plc_A 87 ETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSE 157 (274)
T ss_dssp HHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEEeCCCCCCcHHHHHHHHHHHhhceeecCcccccCCCCCCHHHhCCCEEEEEe
Confidence 9999985555445899999997754222 22345566899999998652 224678999999999999654
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.6e-09 Score=122.53 Aligned_cols=107 Identities=26% Similarity=0.460 Sum_probs=86.8
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~ 509 (561)
...|.|+|+.|.+|+. .+..+.+||||++.+.+.+....++||+++++++||+|||+|.|.+...+. ..|+|.
T Consensus 171 ~~~L~V~v~~a~~L~~------~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~ 244 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVE 244 (674)
T ss_dssp SSEEEEEEEEEESCCC------CSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEE
T ss_pred cceeeeeeecccccCC------CCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeE
Confidence 3568999999999863 244567899999999776666678899999999999999999999875443 459999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCC-c-eEEEccC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQG-I-RAVPLHD 543 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~G-y-R~ipL~d 543 (561)
|||+|..+++++||.+.++++.+..+ . .|.+|.+
T Consensus 245 v~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls 280 (674)
T 3pfq_A 245 IWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLS 280 (674)
T ss_dssp EEECCSSSCCEECCBCCCBTTHHHHCCEEEEEECBC
T ss_pred EeecccccccccccccccchhhhccCCcccceeecc
Confidence 99999999999999999999987543 2 3445554
|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-10 Score=126.41 Aligned_cols=99 Identities=19% Similarity=0.297 Sum_probs=10.1
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCC---CCCccccEEEEeeecCCceEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN---WIPSWNEEFEFPLSVPELALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn---~nP~WNE~f~F~v~~pela~Lr 507 (561)
.+.|+|+|+.|++|+.. .||||++.+.+ ..+.||++++++ .||+|||+|.|.+. +....|.
T Consensus 10 ~~~L~V~VieAk~L~~~-----------ddpYv~v~l~~----~~~~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~ 73 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPK-----------KRYYCELCLDD----MLYARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALR 73 (483)
T ss_dssp EECC------------------------------------------------------------CCEECC----------
T ss_pred ccEEEEEEEEcCCcCCC-----------CCCeEEEEECC----eEEeeeeEEeCCCCCCCCccccEEEEecC-CCccEEE
Confidence 35799999999999531 18999999865 235689999988 99999999999974 3357899
Q ss_pred EEEEec-C---CCCCCcceEEEEEeCcccCCCc---eEEEccCCC
Q 008582 508 IEVHEY-D---MSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 545 (561)
Q Consensus 508 f~V~D~-d---~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~ 545 (561)
|.|||+ | ..+++++||.+.+|+..+..|. .|.||.++.
T Consensus 74 v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~ 118 (483)
T 3bxj_A 74 LHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPT 118 (483)
T ss_dssp ---------------------------------CCEECC------
T ss_pred EEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCC
Confidence 999994 4 2567999999999999998764 466886544
|
| >1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00015 Score=63.73 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=71.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeec-ccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKT-KTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kT-kvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
-|+|.+.+..--++. ......|||+.|.+.-.... .+.+| .+.+.++.|.|||.|.-.+. +...|.+.|+
T Consensus 7 flRi~~~~~~~~~~~------~~~~~lDPy~aV~vdE~~~~-e~g~t~~~K~kT~~P~Wne~Fd~~V~--~Gr~l~i~Vf 77 (126)
T 1yrk_A 7 FLRIAFNSYELGSLQ------AEDEANQPFCAVKMKEALST-ERGKTLVQKKPTMYPEWKSTFDAHIY--EGRVIQIVLM 77 (126)
T ss_dssp EEEEEEEEEECSSCC------CSSSSCCCEEEEEEEEEEEE-TTEEEEECCSCCBCCCTTCEEEEECC--TTCEEEEEEE
T ss_pred cEEeeeccccccccC------CccccCCceEEEEeeeeEEc-ccceeecccCCCCCcCccceEEeeee--CCEEEEEEEE
Confidence 577777665422211 11234699999888531100 02244 56667899999998887765 4567899999
Q ss_pred ecCCCCCCcceEEEEEeCcccCC------Cc--eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQ------GI--RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~------Gy--R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+.. .+|++.+++++..|.. |- -|+.|. + .+.|+|.+++|
T Consensus 78 h~a----~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe-P------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 78 RAA----EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ-P------QAKVLMSVQYF 124 (126)
T ss_dssp EET----TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECB-S------SCEEEEEEEEE
T ss_pred cCC----CCeeeEEEEEHHHHHhhhccCCCceEEEEecc-c------CcEEEEEEEEe
Confidence 754 2899999999999862 22 245554 2 34688887764
|
| >2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00024 Score=63.30 Aligned_cols=111 Identities=14% Similarity=0.151 Sum_probs=70.9
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeec-ccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKT-KTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kT-kvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.-|+|.+.+..--+.... .....||||.|.+.-... ..+.+| .+.+.++.|+|||.|.-.|. +...|.|.|
T Consensus 10 ~flRi~l~~~~~~~~~~~-----~~~~lDPY~aV~VdE~~~-te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~V 81 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSC-----QGEAVNPYCAVLVKEYVE-SENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIV 81 (138)
T ss_dssp CCEEEEEEEEECCCCCCS-----CCCCCCCEEEEEEEEEEE-ETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEE
T ss_pred cceEEEeeccccCCCCCc-----ccccCCceEEEEeeeeee-ccCceeecccCCCCCccccceEeeeEE--CCeEEEEEE
Confidence 357888766653322100 112469999988753110 012344 44455789999998887765 456789999
Q ss_pred EecCCCCCCcceEEEEEeCcccCC------Cc--eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQ------GI--RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~------Gy--R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
++.. .+|++.+++++..|.. |- -||.|. + .+.|+|.++++
T Consensus 82 fh~a----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe-P------~Gkl~v~i~~~ 129 (138)
T 2enj_A 82 KGKN----VDLISETTVELYSLAERCRKNNGKTEIWLELK-P------QGRMLMNARYF 129 (138)
T ss_dssp ECSS----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECB-S------SCEEEEEEEEC
T ss_pred EcCC----CCeeeEEEEEHHHHHhhhccCCCceEEEEecc-c------CcEEEEEEEEE
Confidence 9654 3899999999999862 32 355554 2 34688888764
|
| >3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0001 Score=74.68 Aligned_cols=136 Identities=11% Similarity=0.122 Sum_probs=90.8
Q ss_pred CCCccceeecccccccccCCCC-----CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHH
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQL-----NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql-----~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
+.||+++.|=-|||++-..-.. .+..-......=|..|+|-+.|++-..++ +...++||--.+ ..+|.||+..
T Consensus 20 ~~pl~~lsiPGTHdS~a~~~~~~~~~~~~~tQ~~si~~QL~~GIR~lDlRv~~~~~-~~l~~~Hg~~~~-~~~l~dvL~e 97 (298)
T 3ea1_A 20 NIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD-NTIVLHHGPLYL-YVTLHEFINE 97 (298)
T ss_dssp TSBTTTSCEEEETTTTCTTCCSHHHHHHHCCCSSCHHHHHHTTCCEEEEEEEECTT-SCEEEEETTEEE-EEEHHHHHHH
T ss_pred CCeeeeeeeccccccccccCCCchhhhcccCccccHHHHHhcCCeEEEEEeEecCC-CcEEEECCcccc-cCCHHHHHHH
Confidence 6799999999999986544210 00011112445688999999999975332 357899984332 4679999999
Q ss_pred HhhhccccCCCceEEEeccCCCH---HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecC
Q 008582 187 IKEYAFVASEYPVVITLEDHLTP---DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTK 253 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~---~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 253 (561)
|+++-=....==|||+|.+--+. ......+.+++.+|++.++.+ ....|+..|+||||++-..
T Consensus 98 i~~FL~~hP~EvVil~ik~e~~~~~~~~~~f~~~~~~~~~~~~~~~~----~~~~ptLge~RGKivll~r 163 (298)
T 3ea1_A 98 AKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEKNYFVDPIFLK----TEGNIKLGDARGKIVLLKR 163 (298)
T ss_dssp HHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTBCC----CCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEEecCCCcCcchHHHHHHHHHHHhcCccccc----CCCCCcHHHhcCCEEEEEe
Confidence 99865443334588888663321 122334556667788766543 2456899999999998765
|
| >3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00012 Score=74.53 Aligned_cols=137 Identities=16% Similarity=0.217 Sum_probs=88.8
Q ss_pred CCCccceeecccccccccCCCCC-----CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHH
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~-----g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
+.||+++.|=-|||++-..-... ..+-......=|..|+|-+.|+|...++ +...++||--.+ ..+|.||++.
T Consensus 16 ~~~l~~lsiPGTHdS~~~~~~~p~~~~~~~tQ~~si~~QL~~GVR~lDlRv~~~~~-~~l~~~Hg~~~~-~~~l~dvL~~ 93 (306)
T 3v1h_A 16 GKHLTEINIPGSHDSGSFTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASAD-NMISVHHGMVYL-HHELGKFLDD 93 (306)
T ss_dssp TSBGGGSCEEEETTGGGGGCCCHHHHHHHCCCSSCHHHHHHTTCCEEEEEEEEEET-TEEEEEETTEEE-EEEHHHHHHH
T ss_pred CCEeecceeccccchhhccCCCcccchhhccCCCCHHHHHHhCcceEEEEeeecCC-CcEEEEccCccc-CCcHHHHHHH
Confidence 68999999999999875432100 0011122466788999999999974322 346789985332 5789999999
Q ss_pred HhhhccccCCCceEEEeccCCCH--HHHHHHHHHHHHH-h-----hccccCCCCCCCCCCCChhhccCcEEEecCC
Q 008582 187 IKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQT-L-----GEILFTPGSECLKEFPSPESLKRRIIISTKP 254 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~--~qQ~~ma~~l~~i-~-----Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~ 254 (561)
|+++-=....=-|||+|+..-+. ..+...++++++. + .++.|.. ...+|+..|+||||++-.+-
T Consensus 94 i~~FL~~hP~EvVil~l~~e~~~~~~~~~~f~~~~~~~~~~~~~~~~~~y~~----~~~~PtLge~RGKIvll~rf 165 (306)
T 3v1h_A 94 AKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTG----SNANPTLKETKGKIVLFNRM 165 (306)
T ss_dssp HHHHHHHSTTCCEEEEEEECSCCCTTCCSCHHHHHHHHTTTCGGGTTTBCCC----SCSSCBHHHHTTSEEEEEES
T ss_pred HHHHHHHCCCeEEEEEEEeCCCCCccchHHHHHHHHHHhhcCcccccceecC----CCCCCchHHhcCcEEEEEec
Confidence 99865443345588888877543 2233444444432 2 1222222 24689999999999987653
|
| >3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0078 Score=59.31 Aligned_cols=67 Identities=16% Similarity=0.267 Sum_probs=51.2
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc---------------------------------ccchH
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT---------------------------------APVEL 180 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt---------------------------------s~i~f 180 (561)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+. .-.+|
T Consensus 22 ~pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r~t~~~~~v~~~t~~el~~l~~~~~~~~~~~~~~iptL 100 (252)
T 3qvq_A 22 APENTLASLHLAGQQGIKWVEIDVMLSGD-GIPVIFHDDYLSRTTDGDGLIYKTPLAELKQLDAGSWKGQEYQQETIPTL 100 (252)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECCCSBSTTTSSCCSBGGGSCHHHHTTSCSSTTTCGGGTTCCCCBH
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEEECCC-CcEEEECCCccccccCCCceeecCcHHHHhcCCCCCccCccCCCCcCcCH
Confidence 44788999999999999999999995444 469999988763 12458
Q ss_pred HHHHHHHhhhccccCCCceEEEeccCCC
Q 008582 181 IKCLRSIKEYAFVASEYPVVITLEDHLT 208 (561)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvIlSlE~Hcs 208 (561)
+||++.+++. .+.|-||.-..
T Consensus 101 ~evl~~~~~~-------~~~l~iEiK~~ 121 (252)
T 3qvq_A 101 LEAIEVISQY-------GMGLNLELKPC 121 (252)
T ss_dssp HHHHHHHHHT-------TCEEEEEECCC
T ss_pred HHHHHHHhcc-------CcEEEEEecCC
Confidence 9999988753 25566776654
|
| >3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.016 Score=56.50 Aligned_cols=68 Identities=18% Similarity=0.196 Sum_probs=52.5
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc--------------------cc-chHHHHHHHHhhhcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--------------------AP-VELIKCLRSIKEYAF 192 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt--------------------s~-i~f~dvi~aI~~~AF 192 (561)
.-+-|.++|..|+..||..||+|++--.| +.|||.|-.|+. .+ -+|.||++.++++.
T Consensus 19 ~pENTl~Af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~~~~v~~~t~~el~~l~~~~~~~iptL~evl~~~~~~~- 96 (238)
T 3no3_A 19 SAQNSIRSLERASEIGAYGSEFDVHLTAD-NVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLK- 96 (238)
T ss_dssp CCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEETTEEGGGSCHHHHTTCBCTTSCBCCBHHHHHHHHHHCT-
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCCCCCCChHhCCHHHHhhCCCCCCCcCCcHHHHHHHHhhcC-
Confidence 44789999999999999999999996444 479999998873 13 46999999988641
Q ss_pred ccCCCceEEEeccCCC
Q 008582 193 VASEYPVVITLEDHLT 208 (561)
Q Consensus 193 ~~S~yPvIlSlE~Hcs 208 (561)
. +.|.||.-..
T Consensus 97 ---~--~~l~iEiK~~ 107 (238)
T 3no3_A 97 ---N--IRLIFELKSH 107 (238)
T ss_dssp ---T--CEEEEEECCC
T ss_pred ---C--ceEEEEeCCC
Confidence 1 5566676654
|
| >1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0067 Score=58.66 Aligned_cols=68 Identities=21% Similarity=0.217 Sum_probs=50.6
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc-----------------ccchHHHHHHHHhhhccccCC
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT-----------------APVELIKCLRSIKEYAFVASE 196 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt-----------------s~i~f~dvi~aI~~~AF~~S~ 196 (561)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+. .--+|+||++.+++ .
T Consensus 20 ~PENTl~Af~~A~~~G~d~iE~DV~lT~D-g~lVv~HD~~l~~g~v~~~t~~eL~~l~~~iptL~evl~~~~~------~ 92 (224)
T 1vd6_A 20 AKENTLESFRLALEAGLDGVELDVWPTRD-GVFAVRHDPDTPLGPVFQVDYADLKAQEPDLPRLEEVLALKEA------F 92 (224)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSCSEETTEEGGGSCHHHHHHHSTTCCBHHHHHGGGGT------C
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEecC-CcEEEECCCccCCCChhhCCHHHHHhcCCCCCCHHHHHHhhhc------c
Confidence 34789999999999999999999994333 469999999984 22358999987763 2
Q ss_pred CceEEEeccCCC
Q 008582 197 YPVVITLEDHLT 208 (561)
Q Consensus 197 yPvIlSlE~Hcs 208 (561)
..+.|-||.-..
T Consensus 93 ~~~~l~iEiK~~ 104 (224)
T 1vd6_A 93 PQAVFNVELKSF 104 (224)
T ss_dssp TTCEEEEEECCC
T ss_pred CCceEEEEECCC
Confidence 235566666543
|
| >2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.016 Score=56.78 Aligned_cols=81 Identities=19% Similarity=0.172 Sum_probs=56.3
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccc--------------------------------c-chH
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA--------------------------------P-VEL 180 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts--------------------------------~-i~f 180 (561)
.=+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+.. + -+|
T Consensus 19 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~g~~~~~~~~~~~iptL 97 (247)
T 2otd_A 19 APENTLAAIDVGAKYGHKMIEFDAKLSKD-GEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLL 97 (247)
T ss_dssp SCSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBSSTTSSCCSBGGGSCHHHHTTCCSSTTTCGGGTTCCCCBH
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCCccccCCCCccHhhCcHHHHhhCCCCCccCCCCCCCcCCCH
Confidence 34789999999999999999999995334 4699999887620 1 368
Q ss_pred HHHHHHHhhhccccCCCceEEEeccCCCHH----HHHHHHHHHHHH
Q 008582 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPD----LQAKVAEMVTQT 222 (561)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~----qQ~~ma~~l~~i 222 (561)
+||++.+++. .+.|-||.-.... --..+++.+++.
T Consensus 98 ~evl~~~~~~-------~~~l~iEiK~~~~~~~~~~~~v~~~l~~~ 136 (247)
T 2otd_A 98 SQVAERCREH-------GMMANIEIKPTTGTGPLTGKMVALAARQL 136 (247)
T ss_dssp HHHHHHHHHT-------TCEEEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-------CCEEEEEECCCCCcchHHHHHHHHHHHHH
Confidence 9999988753 3556666554321 123455555554
|
| >3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.023 Score=55.82 Aligned_cols=65 Identities=17% Similarity=0.198 Sum_probs=50.4
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc----------------------------ccchHHHHHHH
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT----------------------------APVELIKCLRS 186 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt----------------------------s~i~f~dvi~a 186 (561)
-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+. .--+|+||++.
T Consensus 16 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~~~iptL~evl~~ 94 (250)
T 3ks6_A 16 GDSTPHGFTATAAMALEEVEFDLHPTAD-GAIVVHHDPTLDATTDMTGAIVDMTLAKVKTATIRYGAGSHPMTLEELCAL 94 (250)
T ss_dssp CTTCHHHHHHHHTSSSSEEEEEEEECTT-SCEEECSSSBSTTTBSCCSBGGGSCHHHHHHCCBTTSTTCCCEEHHHHHHH
T ss_pred CcchHHHHHHHHHcCCCEEEEEEeEccC-CCEEEECCCccccccCCCCeeecCcHHHHhcCCCCCCCCccCcCHHHHHHH
Confidence 3678999999999999999999995334 469999988763 12348889988
Q ss_pred HhhhccccCCCceEEEeccCC
Q 008582 187 IKEYAFVASEYPVVITLEDHL 207 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc 207 (561)
+++ ..+.|.||.-.
T Consensus 95 ~~~-------~~~~l~iEiK~ 108 (250)
T 3ks6_A 95 YVD-------SHVNFRCEIKP 108 (250)
T ss_dssp HTT-------CSCEEEEEECC
T ss_pred Hhc-------cCcEEEEEeCC
Confidence 764 34777888765
|
| >2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.017 Score=56.83 Aligned_cols=66 Identities=17% Similarity=0.282 Sum_probs=50.6
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCC---cccc-------------------------c-chHHHHHH
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG---TMTA-------------------------P-VELIKCLR 185 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~---Tlts-------------------------~-i~f~dvi~ 185 (561)
=+-|.++|..|+..||..||+|++=-.| +.|||.|-. |+.. + .+|+||++
T Consensus 22 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~~~~l~Rtt~~~g~v~~~t~~eL~~l~~~~~~~iptL~evl~ 100 (258)
T 2o55_A 22 PENTLRSFVLCMERNIPYIETDLRVCKT-GEIVLFHGTPEGTIPFYKDGTSRIGDLSLEELKRLDVGGGHTIPSLEELFV 100 (258)
T ss_dssp CTTCHHHHHHHHHTTCCEEEEEEEECTT-SCEEECCCSTTSBCTTSTTTTCBGGGSCHHHHTTCBSSSSCBCCBHHHHHH
T ss_pred CccHHHHHHHHHHcCcCEEEEEEEEecC-CeEEEEeCCCCccceeeCCCCeehhhCcHHHHhhcCCCCCCccCCHHHHHH
Confidence 4778999999999999999999995334 469999999 8731 2 36899999
Q ss_pred HHhhhccccCCCceEEEeccC
Q 008582 186 SIKEYAFVASEYPVVITLEDH 206 (561)
Q Consensus 186 aI~~~AF~~S~yPvIlSlE~H 206 (561)
.++++. .-+.|.||.-
T Consensus 101 ~~~~~~-----~~~~l~iEiK 116 (258)
T 2o55_A 101 AIEEQK-----FNLKLNLELK 116 (258)
T ss_dssp HHHHSC-----SCCEEEEEEC
T ss_pred Hhhhhc-----CceEEEEEEc
Confidence 888752 2355666654
|
| >1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.012 Score=57.28 Aligned_cols=64 Identities=17% Similarity=0.289 Sum_probs=49.7
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc----------------------cc-chHHHHHHHHhhh
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT----------------------AP-VELIKCLRSIKEY 190 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt----------------------s~-i~f~dvi~aI~~~ 190 (561)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+. .+ -+|+||++.+++.
T Consensus 25 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~Rtt~~~g~v~d~T~~eL~~l~~~~iptL~evL~~~~~~ 103 (234)
T 1o1z_A 25 YLENTLEAFMKAIEAGANGVELDVRLSKD-GKVVVSHDEDLKRLFGLDVKIRDATVSELKELTDGKITTLKEVFENVSDD 103 (234)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEEHHHHCEEEEGGGSCHHHHHHHTTTCCCBHHHHHHHSCTT
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeEecC-CCEEEEcCCcHHhcCCcCcCcccCcHHHHhcCCCCCCCCHHHHHHhcccC
Confidence 34778999999999999999999996444 479999998873 13 3599999987762
Q ss_pred ccccCCCceEEEeccC
Q 008582 191 AFVASEYPVVITLEDH 206 (561)
Q Consensus 191 AF~~S~yPvIlSlE~H 206 (561)
+.|-||.-
T Consensus 104 --------~~l~iEiK 111 (234)
T 1o1z_A 104 --------KIINIEIK 111 (234)
T ss_dssp --------SEEEEEEC
T ss_pred --------CeEEEEeC
Confidence 44566665
|
| >3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.028 Score=56.31 Aligned_cols=64 Identities=20% Similarity=0.317 Sum_probs=50.1
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc--------------------------------ccchH
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--------------------------------APVEL 180 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt--------------------------------s~i~f 180 (561)
..-+.|.++|..|+..||..||+|++--.| +.|||.|-.|+. .--+|
T Consensus 29 ~~pENTl~af~~A~~~g~d~iE~Dv~~TkD-g~~vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~~~~~~~iptL 107 (278)
T 3i10_A 29 SAPENSTAAIDSAIAMKVDIVEIDIQKTKD-GQLILMHDNTLDRTTTGKGEIKNWTLADIKKLKLKDKDGKVTNYVVPTL 107 (278)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBSTTTBSCCSBGGGSCHHHHTTSCBBCTTSCBCSCCCCBH
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECCC-CeEEEecCcchhhcCCCCceeecCcHHHHhcCCCCCCCcccCCCCCCCH
Confidence 345889999999999999999999996544 469999987762 12358
Q ss_pred HHHHHHHhhhccccCCCceEEEecc
Q 008582 181 IKCLRSIKEYAFVASEYPVVITLED 205 (561)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvIlSlE~ 205 (561)
+||++.++. .++|.||.
T Consensus 108 ~evl~~~~~--------~~~~nie~ 124 (278)
T 3i10_A 108 EEALLTAKG--------KIMVNLDK 124 (278)
T ss_dssp HHHHHHHTT--------TSEEEEES
T ss_pred HHHHHHhcC--------CeEEEEec
Confidence 888887763 37888885
|
| >2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.016 Score=57.08 Aligned_cols=40 Identities=25% Similarity=0.335 Sum_probs=33.8
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.=+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+
T Consensus 24 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 63 (252)
T 2pz0_A 24 VPENTIAAFKRAMELGADGIELDVQLTKD-GHLVVIHDETV 63 (252)
T ss_dssp SCTTSHHHHHHHHHHTCSEEEEEEEECTT-CCEEECSSSBS
T ss_pred CCcchHHHHHHHHHcCCCEEEEEEEEecC-CeEEEEcCCcc
Confidence 34778999999999999999999995334 46999998875
|
| >3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
Probab=95.20 E-value=0.057 Score=53.43 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.=+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+.
T Consensus 21 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 61 (272)
T 3ch0_A 21 LPENTIAAFTKALLLGVTTLEFDLVISKD-NRVVVSHDTFFH 61 (272)
T ss_dssp SSTTSHHHHHHHHHHTCSEEEEEEEECTT-CCEEECSSSBCC
T ss_pred CCcccHHHHHHHHHcCCCEEEEeeeEcCC-CcEEEeCCCccc
Confidence 34778999999999999999999995434 469999998873
|
| >3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.046 Score=55.12 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=33.6
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|.++|..|+..||..||+|||--.| +.|||.|-.|+
T Consensus 46 pENTl~af~~A~~~g~d~iE~Dv~~TkD-g~~Vv~HD~~l 84 (292)
T 3mz2_A 46 PENSMETFENTLSYTPATFEIDPRLTKD-SVIVLFHDDTL 84 (292)
T ss_dssp CTTCHHHHHHHHHHCCCEEEECEEECTT-CCEEECCSSSS
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeECCC-CcEEEECCchh
Confidence 4789999999999999999999996444 46999997765
|
| >3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.092 Score=53.22 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=34.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
..-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||
T Consensus 29 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~~Vv~HD~~l 69 (313)
T 3l12_A 29 VMPENTLEGFAFTLAAGVRALEFDVVMTAD-GVPVVTHNHHL 69 (313)
T ss_dssp TSCTTCHHHHHHHHHTTCCEEEEEEEECTT-SCEEECSSSBC
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEECCchh
Confidence 345789999999999999999999995434 46999998775
|
| >3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.29 Score=57.44 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=70.4
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCce-eeecccCCCCCCCccccEEEEeee---cCCceE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLS---VPELAL 505 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~-k~kTkvi~nn~nP~WNE~f~F~v~---~pela~ 505 (561)
....++|+|+++.++..+ .....+.||++.+......-. ..+|+.+. ..+|.|||.++|.+. .|-.|.
T Consensus 353 ~~~~f~v~i~~~~~~n~~-------~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~ar 424 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVN-------IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAAR 424 (1091)
T ss_dssp CCSEEEEEEEEESCCCCC-------CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCE
T ss_pred CCCCEEEEEEEecCCCCC-------ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcE
Confidence 346799999999877532 112346799999874333322 23454333 346789999999876 466799
Q ss_pred EEEEEEecCCC----CCCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 506 LRIEVHEYDMS----EKDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 506 Lrf~V~D~d~~----~~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
|.|+||+.... .....||++.++|- .|++|-..+.|.
T Consensus 425 L~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW 469 (1091)
T 3hhm_A 425 LCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 469 (1091)
T ss_dssp EEEEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECE
T ss_pred EEEEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEee
Confidence 99999986532 12358999999984 578997666553
|
| >1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3 | Back alignment and structure |
|---|
Probab=93.60 E-value=0.058 Score=52.83 Aligned_cols=40 Identities=28% Similarity=0.346 Sum_probs=34.1
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
=+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+.
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 54 (248)
T 1zcc_A 15 PENTFAAADLALQQGADYIELDVRESAD-GVLYVIHDETLD 54 (248)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBTT
T ss_pred CchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCccc
Confidence 4778999999999999999999995334 479999998863
|
| >2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* | Back alignment and structure |
|---|
Probab=93.13 E-value=0.31 Score=56.62 Aligned_cols=105 Identities=17% Similarity=0.189 Sum_probs=70.1
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCc-eeeecccCCCCCCCccccEEEEeeec---CCce
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELA 504 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~-~k~kTkvi~nn~nP~WNE~f~F~v~~---pela 504 (561)
.....++|+|.++.++... ...+.||++.+......- ....|+.+.-..+|.|||.+.|.+.. |-.|
T Consensus 214 ~~~~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a 284 (940)
T 2wxf_A 214 SLEQPFSIELIEGRKVNAD---------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMA 284 (940)
T ss_dssp TCCSEEEEEEEEEECCCC------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTC
T ss_pred hcCCceEEEEEEecccCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCccc
Confidence 3457899999999987531 224679998886322111 12345444334579999999998764 5568
Q ss_pred EEEEEEEecCCC--C----------CCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 505 LLRIEVHEYDMS--E----------KDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 505 ~Lrf~V~D~d~~--~----------~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
.|.|+||+.... + ....+|++.+||- .|++|...+.|.
T Consensus 285 ~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw 338 (940)
T 2wxf_A 285 RLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMW 338 (940)
T ss_dssp EEEEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECE
T ss_pred EEEEEEEEecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEEe
Confidence 999999996321 1 2349999999984 478998766653
|
| >3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.34 E-value=3.1 Score=39.87 Aligned_cols=67 Identities=12% Similarity=0.187 Sum_probs=45.1
Q ss_pred eeecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCCCCC----CcceEEEEEeCc-----ccCCCceEEEcc
Q 008582 476 MKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK----DDFGGQTCLPVS-----ELKQGIRAVPLH 542 (561)
Q Consensus 476 k~kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~~~~----dd~iGq~~lpL~-----~L~~GyR~ipL~ 542 (561)
..+|-+...+-+|.|+|++...+... +.+-|+|.+++.....+ ...+|-+.+||- .|+.|...++|+
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~dG~~L~DG~H~L~vy 155 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYDGTTLRDGEHDLIVY 155 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTTSCBCCSEEEEEEEE
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccCCCcEEccCCEEEEEE
Confidence 46788888888999999998887643 34789999987543211 235666666653 155566566665
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=92.24 E-value=0.081 Score=50.35 Aligned_cols=100 Identities=11% Similarity=0.159 Sum_probs=59.1
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHH---HHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLI---EVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~---~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~ 97 (561)
...++..+|..|-.+ +.|+.++|..+|. ...+. ..+.+++..++.+.-.. ...-+.+.++++.|..+|....
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~-~~~~~~~~~~~~~~f~~--~D~d~dG~I~~~EF~~~~~~~~ 196 (226)
T 2zfd_A 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGM-NLKDTVIEDIIDKTFEE--ADTKHDGKIDKEEWRSLVLRHP 196 (226)
T ss_dssp HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHH--HCSSCSSEECHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHH--hCCCCCCcCcHHHHHHHHHhCh
Confidence 355789999998644 8999999999997 34565 46888888887643210 1111345699999999998431
Q ss_pred C--CCCCCCCCccCCCCCCccceeeccccccc
Q 008582 98 N--PPLSPTPVVHHDMTAPVSHYFIYTGHNSY 127 (561)
Q Consensus 98 n--~~~~~~~~~~~dm~~PLs~YfI~SSHNTY 127 (561)
. ..+. .....+.+.++..|...|.||||
T Consensus 197 ~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~ 226 (226)
T 2zfd_A 197 SLLKNMT--LQYLKDITTTFPSFVFHSQVEDT 226 (226)
T ss_dssp GGGGGGC--CGGGGGHHHHC------------
T ss_pred HHHHHhc--hHHhhchhhcchhHHhhhhhccC
Confidence 1 1111 23556788889999999999987
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=91.87 E-value=0.62 Score=37.81 Aligned_cols=63 Identities=17% Similarity=0.341 Sum_probs=48.8
Q ss_pred hHHHHHHHHhhCC-C---CcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSEN-G---TMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~~-~---~l~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|..+ + .|+.++|+.+|+.+ -+. ..+.+.+.++|..+.. -+.+.++++.|..+|.
T Consensus 9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~-~~~~~~v~~~~~~~D~------d~dG~I~f~EF~~~~~ 79 (92)
T 3rm1_A 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE-IKEQEVVDKVMETLDS------NGDGECDFQEFMAFVA 79 (92)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCC-CCSHHHHHHHHHHHCT------TSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccC-cccHHHHHHHHHHHcC------CCCCCCcHHHHHHHHH
Confidence 4788999999833 4 99999999999973 223 3678899999988752 1346799999998875
|
| >1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A* | Back alignment and structure |
|---|
Probab=91.70 E-value=0.079 Score=52.79 Aligned_cols=36 Identities=19% Similarity=0.062 Sum_probs=33.2
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~T 173 (561)
+-|.++|..|+..||..||+||+= .| +.|||.|=.|
T Consensus 14 ENTl~Af~~A~~~Gad~IE~DV~l-kD-G~lVv~HD~~ 49 (285)
T 1xx1_A 14 VNAVAQIPDFLDLGANALEADVTF-KG-SVPTYTYHGT 49 (285)
T ss_dssp CCSTTHHHHHHHHTCSEEEEEEEE-ET-TEEEEEECCS
T ss_pred hccHHHHHHHHHhCCCEEEEEEEE-EC-CEEEEEcCCc
Confidence 788999999999999999999998 66 4699999988
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=91.70 E-value=0.53 Score=40.57 Aligned_cols=64 Identities=14% Similarity=0.326 Sum_probs=51.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..|-.+ +.|+.++|+.+|....+.. .+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 87 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~d~------~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQ-VGHRDIEEIIRDVDL------NGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSC-CCHHHHHHHHHHHCS------SSSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC-CCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHh
Confidence 46788999998543 8999999999999866664 788999999998752 1246799999999874
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=91.49 E-value=0.85 Score=37.02 Aligned_cols=66 Identities=15% Similarity=0.329 Sum_probs=52.1
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+..+|..+|..|-.+ +.|+.++|...|+... . ..+.+++..++..+.. -+.+.++++.|..++.
T Consensus 25 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~-~~~~~e~~~l~~~~D~------d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLG-E-KLTDEEVDEMIREADI------DGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHT-C-CCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHh
Confidence 44667899999999644 8899999999998764 3 3688899999988752 1246799999999875
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=91.16 E-value=0.56 Score=39.37 Aligned_cols=63 Identities=13% Similarity=0.216 Sum_probs=49.7
Q ss_pred hHHHHHHHHhh-C--C-CCcCHHHHHHHHHHHc----CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-E--N-GTMTVDHLHRFLIEVQ----KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~--~-~~l~~~~~~~Fl~~~Q----~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|. . + +.|+.++|+.+|+.+= ++ ..+.+.+.++|..+.. -+.+.++++.|..+|.
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~-~~~~~ev~~~i~~~D~------dgDG~Idf~EF~~~~~ 80 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPT-EFRECDYNKFMSVLDT------NKDCEVDFVEYVRSLA 80 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCC-TTCHHHHHHHHHHHHH------CCCSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCC-CCCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHH
Confidence 57889999997 3 3 6899999999998642 33 3688899999998752 1346799999999876
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.01 E-value=0.83 Score=38.47 Aligned_cols=64 Identities=16% Similarity=0.320 Sum_probs=48.9
Q ss_pred hHHHHHHHHhh-C-C--CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-E-N--GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~-~--~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|. . + ++|+.++|+.+|+.+=++ ...+.+.+.++|..+.. -+.+.++++.|..+|.
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~------dgDG~Idf~EF~~~m~ 83 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLS 83 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcC------CCCCCCcHHHHHHHHH
Confidence 57888999997 2 2 489999999999964332 13578899999998652 1346799999999876
|
| >1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A | Back alignment and structure |
|---|
Probab=91.01 E-value=0.18 Score=52.08 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.=+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+.
T Consensus 43 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 83 (356)
T 1ydy_A 43 LPEHTLPAKAMAYAQGADYLEQDLVMTKD-DNLVVLHDHYLD 83 (356)
T ss_dssp SSTTCHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBCT
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeEECCC-CcEEEeCCChHH
Confidence 34789999999999999999999995434 469999999874
|
| >2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A | Back alignment and structure |
|---|
Probab=90.61 E-value=0.22 Score=49.74 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=33.4
Q ss_pred CCCCChHHHHHH-HhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRA-LQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~a-L~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.=+-|.++|..| +..||..||+|++=-.| +.|||.|-.|+
T Consensus 36 ~PENTl~Af~~A~~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 76 (287)
T 2oog_A 36 APEHTFQAYDKSHNELKASYIEIDLQRTKD-GHLVAMHDETV 76 (287)
T ss_dssp SCSSSHHHHHHHHHTSCCSEEEEEEEECTT-CCEEECSSSBS
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCChh
Confidence 347789999999 68999999999994334 46999999886
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.44 E-value=0.57 Score=39.00 Aligned_cols=63 Identities=14% Similarity=0.251 Sum_probs=49.1
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..||+..|..|=.+ +.|+.++|+..|+.- |. ..+.+++.+|+..+.. -+.+.++++.|...|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~l-g~-~~~~~ei~~l~~~~D~------d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GY-MPNEVELEVIIQRLDM------DGDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH-TC-CCCTTTHHHHHHHHCS------SCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHHCC------CCCCeEeHHHHHHHhC
Confidence 45688889998533 899999999999875 44 3688889999998752 1346799999999775
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=90.42 E-value=0.92 Score=37.18 Aligned_cols=64 Identities=16% Similarity=0.322 Sum_probs=48.1
Q ss_pred hHHHHHHHHhh-CC---CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-EN---GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~~---~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|. .+ ++|+.++|+.+|+.+=++ ...+.+.+.++|..+.. -+.+.++++.|..+|.
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~------d~DG~Idf~EF~~~~~ 80 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLS 80 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCT------TSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCC------CCCCCCcHHHHHHHHH
Confidence 57889999997 22 499999999999863331 12478889999998652 1346799999998875
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=90.16 E-value=0.38 Score=43.67 Aligned_cols=69 Identities=12% Similarity=0.263 Sum_probs=50.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhh-hh-hccCCCCHHHHHHhhcCC
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHL-NI-FQRRGLNLEAFFKYLFGD 96 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~-~~-~~~~~l~~~gF~~~L~s~ 96 (561)
..++..+|..|-.+ +.|+.++|+.+|. +. .++.+++..++..+...... .. ...+.+++++|..+|.+.
T Consensus 107 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~---~~-~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~~ 179 (180)
T 3mse_B 107 STFLKAAFNKIDKDEDGYISKSDIVSLVH---DK-VLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLST 179 (180)
T ss_dssp -CHHHHHHHHHCTTCSSCBCHHHHHHHTT---TS-SCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHc---CC-CCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHhc
Confidence 46899999999643 8999999999998 33 57899999999988732100 00 011579999999999753
|
| >2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=89.64 E-value=0.43 Score=56.20 Aligned_cols=104 Identities=15% Similarity=0.135 Sum_probs=66.8
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCc-eeeecccCCCCCCCccccEEEEeeec---CCceE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELAL 505 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~-~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~ 505 (561)
....++|+|.++.++... ...+.||++.+......- ....|+.+.-..+|.|||-+.|.+.. |-.|.
T Consensus 351 ~~~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~ 421 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMAR 421 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCE
T ss_pred cCCCEEEEEEEeccCCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcE
Confidence 456899999999887431 234678888776322111 12345544435679999999998764 55589
Q ss_pred EEEEEEecCCC----------------------CCCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 506 LRIEVHEYDMS----------------------EKDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 506 Lrf~V~D~d~~----------------------~~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
|.|+||+.... .....+|++.++|- .|++|...+.|.
T Consensus 422 L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw 484 (1092)
T 2y3a_A 422 LCFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSW 484 (1092)
T ss_dssp EEEECCCC------------------------------CCEEEEESBCTTCBBCCEEEECCCC
T ss_pred EEEEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEe
Confidence 99999985311 01238999999874 477887766664
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=89.45 E-value=0.73 Score=35.40 Aligned_cols=62 Identities=15% Similarity=0.360 Sum_probs=49.2
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+.++..+|..|-.+ +.|+.++|...|+... ..+.+++..++..+.. -+.+.++++.|..++.
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g---~~~~~~~~~~~~~~D~------~~dg~i~~~ef~~~~~ 65 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDT------DGDGFIDFNEFISFCN 65 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH---TCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC---CCCHHHHHHHHHHhCC------CCCCeEcHHHHHHHHH
Confidence 35789999999643 8899999999999865 3688889999888752 1245799999999876
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=89.06 E-value=0.73 Score=33.97 Aligned_cols=61 Identities=16% Similarity=0.361 Sum_probs=47.7
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
++..+|..+-.+ +.++.++|...|.... . ..+.+++..++..+... +.+.++++.|..++.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~D~~------~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFS-P-YFTQEDIVKFFEEIDVD------GNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTC-T-TSCHHHHHHHHHHHCCS------SSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHH
Confidence 578899998544 8999999999998753 3 36888899998887521 245699999999875
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=88.56 E-value=0.96 Score=37.16 Aligned_cols=66 Identities=14% Similarity=0.237 Sum_probs=51.4
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....++..+|..|-.+ +.|+.++|+.+|.... +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 39 KSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGAR-ALTDAETKAFLKAGDS------DGDGAIGVDEWAALVK 108 (109)
T ss_dssp SCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCC-CCCHHHHHHHHHHHCT------TCSSEECHHHHHHHHT
T ss_pred hhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCC-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHh
Confidence 3567889999998644 8899999999999873 33 3688899999988752 1245699999999875
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.23 E-value=0.42 Score=41.62 Aligned_cols=63 Identities=13% Similarity=0.339 Sum_probs=48.1
Q ss_pred hHHHHHHHHhhCC-CCcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSEN-GTMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~~-~~l~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..|..+|++|..+ +.|+.++|+..|+.+ =+. ..+.+.+.+||...-. -+.+.++++.|..+|.
T Consensus 15 e~l~~~F~~yd~ddG~Is~~EL~~~l~~~~~~~l~~-~~~~~~v~~~i~~~D~------d~DG~IdF~EF~~lm~ 82 (121)
T 4drw_A 15 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLEN-QKDPLAVDKIMKDLDQ------CRDGKVGFQSFFSLIA 82 (121)
T ss_dssp HHHHHTTGGGSCTTCSCCHHHHHHHTTTSCHHHHTT-SSCTTHHHHHHHHHCT------TCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEcHHHHHHHHHHHhhhhccc-CCCHHHHHHHHHHHcC------CCCCcCcHHHHHHHHH
Confidence 4577789999877 999999999999752 022 3577889999988652 2346799999999876
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=88.13 E-value=2.1 Score=33.90 Aligned_cols=63 Identities=13% Similarity=0.262 Sum_probs=48.9
Q ss_pred chHHHHHHHHhh-CC--C-CcCHHHHHHHHHH-----HcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYS-EN--G-TMTVDHLHRFLIE-----VQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~-~~--~-~l~~~~~~~Fl~~-----~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..|- .+ + .|+.++|+..|+. .. . ..+.+++..++..+... +.+.++++.|..++.
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g-~-~~~~~~~~~~~~~~D~d------~dg~i~~~eF~~~~~ 79 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLD-V-QKDADAVDKIMKELDEN------GDGEVDFQEFVVLVA 79 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHH-C-CCCHHHHHHHHHHHHHC------TTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHH
Confidence 357888999995 34 6 8999999999986 43 3 36888999999887621 246799999998876
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.90 E-value=0.48 Score=43.68 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=52.4
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (561)
...++..+|..|-.+ +.|+.++|+.+|....+. ..+.+++..++..+-.. ...-+.+.+++++|..+|.+.
T Consensus 112 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-~~~~~~~~~~~~~~~~~--~D~d~dG~Is~~EF~~~~~~~ 184 (202)
T 2bec_A 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV-QVTEEQLENIADRTVQE--ADEDGDGAVSFVEFTKSLEKM 184 (202)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCS-CCCHHHHHHHHHHHHHH--HCSSCSSSEEHHHHHHTTTTS
T ss_pred HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHH--cCCCCCCcCcHHHHHHHHHHh
Confidence 356788999998644 889999999999976565 37889999998872100 011134679999999999843
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=87.20 E-value=1.4 Score=37.64 Aligned_cols=65 Identities=15% Similarity=0.327 Sum_probs=48.1
Q ss_pred chHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~-~~--~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+|..+|..|- .+ . .|+.++|+.+|+.+-++ ...+.+++.+||..+.. -+.+.++++.|..+|.
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~------dgdG~Idf~EF~~~m~ 92 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLS 92 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCS------SSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHH
Confidence 357888999997 44 4 89999999999864321 12567789999887651 1246799999998876
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=87.18 E-value=1.6 Score=37.68 Aligned_cols=71 Identities=15% Similarity=0.199 Sum_probs=52.4
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
....++..+|..|-.+ +.|+.++|+.+|....+. ..+.+++..++..+-.. ...-+.+.++++.|..+|.+
T Consensus 72 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~~~~--~D~~~dg~i~~~eF~~~~~~ 144 (155)
T 3ll8_B 72 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIVDKTIIN--ADKDGDGRISFEEFCAVVGG 144 (155)
T ss_dssp CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-GSCHHHHHHHHHHHHHH--HCTTSSSSBCHHHHHHHHGG
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHH--hCCCCCCcCcHHHHHHHHhc
Confidence 3446788999998644 899999999999985555 36888999998883210 01113467999999999984
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=87.00 E-value=1.5 Score=38.61 Aligned_cols=63 Identities=19% Similarity=0.407 Sum_probs=48.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..|-.+ +.|+.++|..+|... +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~ 164 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKEL-GE-NLTEEELQEMIAEADR------NDDNEIDEDEFIRIMK 164 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCC------SSSSCBCHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CC-CCCHHHHHHHHHHhCC------CCCCCEeHHHHHHHHH
Confidence 45677788888643 889999999999864 33 4788889999888752 1346799999999987
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=86.92 E-value=1.6 Score=37.78 Aligned_cols=64 Identities=14% Similarity=0.341 Sum_probs=48.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
..++..+|..|-.+ +.|+.++|+.+|... ++ ..+.+++..++..+.. -+.+.++++.|..+|.+
T Consensus 82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~------d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNL-GE-KLTDDEVDEMIREADI------DGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCS------SSSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHcc
Confidence 35677888888543 889999999999865 34 4788899999888752 12467999999998864
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=86.78 E-value=1 Score=36.96 Aligned_cols=66 Identities=17% Similarity=0.247 Sum_probs=49.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....++..+|..|-.+ +.|+.++|..+|.... +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 38 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSAR-ALTDAETKAFLADGDK------DGDGMIGVDEFAAMIK 107 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSC-CCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCC-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHh
Confidence 3566889999998643 8899999999998652 33 3688889999888752 1245799999998774
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=86.78 E-value=1.4 Score=36.21 Aligned_cols=67 Identities=13% Similarity=0.247 Sum_probs=52.4
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.....++..+|..|-.+ +.|+.++|...|.... +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 37 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 37 GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALLAAGDS------DHDGKIGADEFAKMVA 107 (109)
T ss_dssp TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 34567899999999643 8999999999999763 44 4688899999988752 1346799999999875
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=86.72 E-value=1.4 Score=34.99 Aligned_cols=63 Identities=21% Similarity=0.412 Sum_probs=48.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..|-.+ +.|+.++|..+|+... . ..+.+++..++..+... +.+.++++.|..++.
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~l~~~~D~~------~dg~i~~~eF~~~~~ 83 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLG-Q-NPTKEELDAIIEEVDED------GSGTIDFEEFLVMMV 83 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCTT------CCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHH
Confidence 34677889988644 8899999999998753 3 46888999999887521 246799999998876
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=86.55 E-value=1.9 Score=35.87 Aligned_cols=64 Identities=9% Similarity=0.207 Sum_probs=47.2
Q ss_pred hHHHHHHHHhhC----C-CCcCHHHHHHHHHHHcCCCC---CCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSE----N-GTMTVDHLHRFLIEVQKEDK---ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~----~-~~l~~~~~~~Fl~~~Q~~~~---~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|.. + +.|+.++|+..|+..=++.. .+.+.+.++|..+.. -+.+.++++.|..+|.
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~------d~DG~Idf~EF~~~m~ 82 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDA------NHDGRISFDEYWTLIG 82 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCC------CSSCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCC------CCCCCCcHHHHHHHHH
Confidence 578999999964 2 79999999999987543321 135678888887541 1346799999999876
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=86.18 E-value=0.93 Score=39.05 Aligned_cols=63 Identities=13% Similarity=0.373 Sum_probs=51.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+ + +.+.++++.|..+|.
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~-d-------~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTW-GD-ALTDQEAIDALNAF-S-------SEDNIDYKLFCEDIL 145 (146)
T ss_dssp CCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHH-C-------SSSEEEHHHHHHHHT
T ss_pred chHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHc-C-------CCCcCcHHHHHHHHh
Confidence 3567899999998644 789999999999864 54 47899999999987 2 246799999999886
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=85.93 E-value=2.5 Score=35.64 Aligned_cols=64 Identities=16% Similarity=0.274 Sum_probs=47.9
Q ss_pred hHHHHHHHHhhC-C--C-CcCHHHHHHHHHHHcCCC---C-CCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSE-N--G-TMTVDHLHRFLIEVQKED---K-ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~-~--~-~l~~~~~~~Fl~~~Q~~~---~-~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|.. + . .|+.++|+..|+..=+.. . .+.+.+..+|..+.. -+.+.++++.|..+|.
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~------d~dG~I~f~EF~~~~~ 83 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDT------NADKQLSFEEFIMLMA 83 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCC------CCCCCEeHHHHHHHHH
Confidence 478889999973 4 6 899999999998543331 1 477889999887652 1246799999998875
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=85.90 E-value=1.2 Score=37.89 Aligned_cols=63 Identities=19% Similarity=0.429 Sum_probs=50.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
..++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+. . +.+.+++++|..+|.+
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d------~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSL-GE-KLSNEEMDELLKGVP------V-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH-HS-CSCHHHHHHHHHHTT------C-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc-CC-CCCHHHHHHHHHhcc------C-CCCcEeHHHHHHHHhc
Confidence 47899999998644 899999999999876 34 368889999988765 2 3567999999998863
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.65 E-value=0.92 Score=38.37 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=46.9
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+.++..+|..|-.+ +.|+.++|+.+|+ +. ..+.+++..|+..+.. -+.+.++++.|..+|.
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~-~~~~~~~~~i~~~~D~------d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILM---QS-SLPQAQLASIWNLSDI------DQDGKLTAEEFILAMH 75 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TT-CCCHHHHHHHHHHHCS------SCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hC-CCCHHHHHHHHHHHCC------CCCCCCcHHHHHHHHH
Confidence 46778889998643 8899999999998 33 4688889999887641 1245699999998875
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=85.58 E-value=1.3 Score=36.23 Aligned_cols=66 Identities=17% Similarity=0.315 Sum_probs=50.7
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....++..+|..|-.+ +.++.++|...|.... +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~~~~D~------~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR-VLTSAETKAFLAAGDT------DGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSC-CCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccc-cCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHh
Confidence 4567889999998644 8999999999998653 33 4688889999888752 1346799999999875
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A | Back alignment and structure |
|---|
Probab=85.16 E-value=1.2 Score=36.47 Aligned_cols=65 Identities=12% Similarity=0.315 Sum_probs=47.8
Q ss_pred chHHHHHHHHhh-CCCCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYS-ENGTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~-~~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+|..+|..|- .++.|+.++|+..|+..-+. ...+.+.+..+|..+.. -+.+.++++.|...|.
T Consensus 8 ~~~l~~~F~~fD~~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~------d~dG~I~f~EF~~~~~ 76 (96)
T 1a4p_A 8 METMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQ------CRDGKVGFQSFFSLIA 76 (96)
T ss_dssp HHHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCT------TSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 357888999997 34799999999999863221 12466788999887652 1246799999998775
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=85.04 E-value=1.4 Score=36.33 Aligned_cols=63 Identities=16% Similarity=0.091 Sum_probs=49.2
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+.++..+|..+-.+ +.++.++|+.+|+.. ..+.+++.+|++.... -+.+.+++++|...|.
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----~l~~~~l~~i~~~~D~------d~dG~i~~~EF~~~~~ 72 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS----GLPDLILGKIWDLADT------DGKGVLSKQEFFVALR 72 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS----SSCHHHHHHHHHHHCC------SSSSSCCSHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc----CCCHHHHHHHHHHHCC------CCCCcCCHHHHHHHHH
Confidence 3467899999999644 899999999999753 3678889999887541 1346799999998875
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=84.81 E-value=0.75 Score=37.76 Aligned_cols=67 Identities=16% Similarity=0.325 Sum_probs=50.0
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
....++..+|..|-.+ +.|+.++|..+|.... +. ..+.+++..++..+.. -+.+.++++.|..+|.+
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~s 108 (108)
T 1rro_A 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR-ELTESETKSLMDAADN------DGDGKIGADEFQEMVHS 108 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC-CCCHHHHHHHHHHHCC------SSSSSEEHHHHHHHHTC
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccC-CCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHcC
Confidence 3567788999998643 7899999999998653 33 3688888888887652 12456999999988753
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=84.65 E-value=1.6 Score=38.45 Aligned_cols=65 Identities=9% Similarity=0.169 Sum_probs=51.4
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
...++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+.. -+.+.++++.|..+|.+
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~------d~dg~I~~~eF~~~~~~ 159 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-GG-RFTPEEIKNMWAAFPP------DVAGNVDYKNICYVITH 159 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHc-CC-CCCHHHHHHHHHhcCC------CCCCeEeHHHHHHHHHh
Confidence 457889999998644 889999999999864 44 4788999999988641 12467999999999984
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=84.65 E-value=1.9 Score=35.22 Aligned_cols=66 Identities=17% Similarity=0.276 Sum_probs=51.6
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....++..+|..|-.+ +.|+.++|..+|...- +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR-DLSAKETKTLMAAGDK------DGDGKIGVEEFSTLVA 107 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCC-CCCHHHHHHHHHHHCC------CCCCcCCHHHHHHHHH
Confidence 4567899999998644 8899999999999873 33 3688899999988752 1246799999999875
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=84.62 E-value=1.2 Score=33.85 Aligned_cols=63 Identities=13% Similarity=0.278 Sum_probs=48.5
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..|-.+ +.|+.++|...|+... . ..+.+++..++..+.. -+.+.++++.|..++.
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~~~~~~d~------~~~g~i~~~eF~~~~~ 70 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALG-F-DVKKPEILELMNEYDR------EGNGYIGFDDFLDIMT 70 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHT-C-CCHHHHHHHHHHHHCC------SSSSEEEHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHHCC------CCCCcCcHHHHHHHHH
Confidence 35678889998644 8899999999999863 3 3677888889888752 1235699999999876
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=84.52 E-value=2.1 Score=37.20 Aligned_cols=63 Identities=16% Similarity=0.390 Sum_probs=48.3
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..+-.+ +.|+.++|+.+|... +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 95 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-g~-~~~~~~~~~~~~~~d~------~~dg~i~~~eF~~~~~ 159 (162)
T 1top_A 95 EEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVTEEDIEDLMKDSDK------NNDGRIDFDEFLKMME 159 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TC-CCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHh
Confidence 45688889888543 889999999999754 33 4688889999888752 1246799999999886
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=84.46 E-value=2.5 Score=36.76 Aligned_cols=66 Identities=17% Similarity=0.296 Sum_probs=51.4
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
.+..+|..+|..|=.+ ++|+.++|+..|... +. ..+.+++..++..+.. -+.+.++++.|.+.|..
T Consensus 80 ~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~-g~-~~~~~e~~~l~~~~D~------d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINL-GE-KVTDEEIDEMIREADF------DGDGMINYEEFVWMISQ 147 (148)
T ss_dssp TTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHH-TC-CCCHHHHHHHHHHHCC------SCCSSEEHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHc-Cc-cccHHHHHHHHHHhCC------CCCCeEeHHHHHHHHhc
Confidence 3456799999998543 899999999999865 44 4788999999988752 13467999999998763
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=84.30 E-value=1.4 Score=34.39 Aligned_cols=63 Identities=10% Similarity=0.256 Sum_probs=49.1
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
..++..+|..|-.+ +.|+.++|...|.... ..+.+++..++..+... +.+.++++.|..++..
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g---~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 74 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTD------GDGFISFDEFTDFARA 74 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TCCHHHHHHHHHHHCTT------CSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC---CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHH
Confidence 45678889988543 8899999999998653 46888999999887521 2456999999998873
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.27 E-value=1.5 Score=35.05 Aligned_cols=61 Identities=16% Similarity=0.351 Sum_probs=46.8
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+|..+|..|-.+ +.|+.++|...|+... .+.+++..++..+.. -+.+.+++++|..++.
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~~~~~~~~~~~~D~------d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELR----VRPADAEAVFQRLDA------DRDGAITFQEFARGFL 88 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT----CCHHHHHHHHHHHCT------TCSSEECHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC----cCHHHHHHHHHHhCC------CCCCCEeHHHHHHHHH
Confidence 45678889998644 8999999999998642 578889999888752 1245699999998764
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=84.16 E-value=2 Score=34.00 Aligned_cols=64 Identities=20% Similarity=0.409 Sum_probs=49.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
..+|..+|..|-.+ +.|+.++|...|... +. ..+.+++..++..+.. -+.+.++++.|..++..
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~l~~~~d~------~~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINL-GE-KLTDEEVEQMIKEADL------DGDGQVNYEEFVKMMMT 73 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCS------SCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHHh
Confidence 45788899998644 889999999999865 33 3688899999888752 12457999999998873
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=84.15 E-value=2.7 Score=38.35 Aligned_cols=71 Identities=10% Similarity=0.116 Sum_probs=53.2
Q ss_pred cCCcCCCCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 16 FHVAASEAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 16 ~~~~~~~~r~ei~~if~~~~~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
+.+....++.+|..+|..+-. + +.|+.++|..+|. ..+ ...+.+.+..++..+.. -+.+.++++.|..++
T Consensus 18 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~~-~~~~~~~~~~l~~~~D~------d~dG~I~~~EF~~~~ 89 (191)
T 1y1x_A 18 PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALS-SAG-VPFSLATTEKLLHMYDK------NHSGEITFDEFKDLH 89 (191)
T ss_dssp TTCCSSCTTSCHHHHHHHHCTTCSSSBCHHHHHHHHC-BTT-BCCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH-HcC-CCCCHHHHHHHHHHhCC------CCCCeEcHHHHHHHH
Confidence 344556678899999999953 3 8999999999993 222 24688889999888752 124679999999876
Q ss_pred c
Q 008582 94 F 94 (561)
Q Consensus 94 ~ 94 (561)
.
T Consensus 90 ~ 90 (191)
T 1y1x_A 90 H 90 (191)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11 | Back alignment and structure |
|---|
Probab=83.87 E-value=4.5 Score=35.28 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=53.9
Q ss_pred cccCCcCCCCchHHHHHHHHhhCC-----CCcCHHHHHHHHHHHcCC--CCCCHHHHHHHHHHHHhhhhhhhhccCCCCH
Q 008582 14 RRFHVAASEAPDAVKSMFDQYSEN-----GTMTVDHLHRFLIEVQKE--DKASKEDAQAIIDSLRELKHLNIFQRRGLNL 86 (561)
Q Consensus 14 r~~~~~~~~~r~ei~~if~~~~~~-----~~l~~~~~~~Fl~~~Q~~--~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~ 86 (561)
.+++|. -.+|+.+|..|+.. ..|+..+|.+++++.+=. ..+|..++.-|+.++. . ..+.|++
T Consensus 15 ~~~~~~----~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv~-k------~~r~I~f 83 (125)
T 1pul_A 15 AGFNWD----DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVT-G------PKKKATF 83 (125)
T ss_dssp ---CCC----HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHT-C------SSSCCCH
T ss_pred HhcCcc----HHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehccc-C------CcceecH
Confidence 346664 45899999999842 689999999999988854 3589999999999983 1 1256999
Q ss_pred HHHHHhhc
Q 008582 87 EAFFKYLF 94 (561)
Q Consensus 87 ~gF~~~L~ 94 (561)
++|..+|-
T Consensus 84 ~qF~~aL~ 91 (125)
T 1pul_A 84 DETKKVLA 91 (125)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999886
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=83.75 E-value=2.2 Score=35.15 Aligned_cols=64 Identities=16% Similarity=0.304 Sum_probs=47.8
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~~--~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|. .+ + .|+.++|+.+|+..-+. ...+.+.+..+|..+.. -+.+.++++.|...|.
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~------d~dG~I~f~EF~~~~~ 80 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDS------NKDNEVDFNEFVVLVA 80 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCC------CCCCcCcHHHHHHHHH
Confidence 57888999996 33 4 89999999999864321 13578889999887652 1246799999998775
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
Probab=83.61 E-value=1.3 Score=33.45 Aligned_cols=64 Identities=11% Similarity=0.330 Sum_probs=48.6
Q ss_pred CchHHHHHHHHh-hC--C-CCcCHHHHHHHHHHHcCCCCC--CHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 23 APDAVKSMFDQY-SE--N-GTMTVDHLHRFLIEVQKEDKA--SKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 23 ~r~ei~~if~~~-~~--~-~~l~~~~~~~Fl~~~Q~~~~~--~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+..++..+|..| -. + +.|+.++|...|..... .. +.+.+..++..+.. -+.+.++++.|..++.
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~l~~~~D~------~~~g~i~~~eF~~~~~ 72 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP--SLLKGMSTLDEMIEEVDK------NGDGEVSFEEFLVMMK 72 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG--GSCTTSCSHHHHHHHHCT------TCSSEECHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC--CcCCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHH
Confidence 457899999999 33 3 67999999999998742 24 66778888887752 1245699999998875
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=83.52 E-value=1.4 Score=38.39 Aligned_cols=66 Identities=9% Similarity=0.282 Sum_probs=52.3
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (561)
....++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..|+..+.. - .+.++++.|..+|.+.
T Consensus 84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~------~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENM-GD-NFNKDEMRMTFKEAPV------E-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHCCE------E-TTEECHHHHHHHHHTS
T ss_pred ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHh-CC-CCCHHHHHHHHHhcCC------C-CCEEeHHHHHHHHhcC
Confidence 3567899999998644 889999999999865 44 4788999999887641 1 3569999999999843
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=83.51 E-value=1.8 Score=35.39 Aligned_cols=66 Identities=12% Similarity=0.249 Sum_probs=51.3
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....++..+|..|-.+ +.|+.++|..+|...- +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~d~------~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR-DLTDAETKAFLKAADK------DGDGKIGIDEFETLVH 108 (110)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC-CCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHhCC------CCCCeEcHHHHHHHHH
Confidence 4567899999998643 8999999999998652 33 3688899999988752 1246799999999875
|
| >3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A* | Back alignment and structure |
|---|
Probab=83.41 E-value=1.5 Score=44.05 Aligned_cols=54 Identities=15% Similarity=0.068 Sum_probs=41.5
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc-------ccchHHHHHHHHhhh
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT-------APVELIKCLRSIKEY 190 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt-------s~i~f~dvi~aI~~~ 190 (561)
.-+++++..|+..|+.-||+|+.=-.++ .|+++|-.+.+ ....|.+-++.|++.
T Consensus 36 vNTl~~~~~a~~~GAn~IE~DV~~~~dg-~~v~~hhg~pcdc~r~C~~~~~~~~~l~~lr~~ 96 (302)
T 3rlg_A 36 VNAIGQIDEFVNLGANSIETDVSFDDNA-NPEYTYHGIPCDCGRNCKKYENFNDFLKGLRSA 96 (302)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEECBCTTS-CBCBCCCCSSCCTTCCSCCCCBHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCEEEEEEEECCCC-CEEEEECCCCcchhccCCCCccHHHHHHHHHHh
Confidence 4569999999999999999999743343 56666655443 357889999999884
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 | Back alignment and structure |
|---|
Probab=83.26 E-value=0.69 Score=35.36 Aligned_cols=66 Identities=14% Similarity=0.272 Sum_probs=47.6
Q ss_pred CchHHHHHHHHhhC-C--C-CcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 23 APDAVKSMFDQYSE-N--G-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 23 ~r~ei~~if~~~~~-~--~-~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
...++..+|..|-. + + .|+.++|..+|+..-+....+.+.+..++..+.. -+.+.++++.|..++.
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~ 74 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDK------NGDGEVSFEEFQVLVK 74 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCC------CSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcC------CCCCCCcHHHHHHHHH
Confidence 35689999999975 4 6 8999999999986444321155667778776541 1245799999998774
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=83.21 E-value=0.96 Score=33.30 Aligned_cols=59 Identities=15% Similarity=0.290 Sum_probs=44.1
Q ss_pred HHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 28 KSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 28 ~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+|..+-.+ +.++.++|..+|+... . ..+.+.+..++..+.. -+.+.++++.|..++.
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~D~------~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKR-A-IKNEQLLQLIFKSIDA------DGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHH-H-HHHHHHHHHHHHHHCT------TCSSSCCHHHHHHHHT
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHcc-C-CCcHHHHHHHHHHHCC------CCCCCCCHHHHHHHHH
Confidence 4678887543 8999999999998753 2 2466778888887752 1346799999999876
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=82.89 E-value=1.2 Score=36.02 Aligned_cols=64 Identities=13% Similarity=0.285 Sum_probs=47.2
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~~--~-~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|. .+ + .|+.++|+..|+..-+....+.+.+..++..+.. -+.+.++++.|..++.
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~------d~dG~I~f~EF~~~~~ 77 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDK------NSDQEIDFKEYSVFLT 77 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTT------TCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 47888999998 54 6 8999999999986422101566778888887652 1245699999999876
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=82.79 E-value=2.1 Score=36.42 Aligned_cols=62 Identities=16% Similarity=0.343 Sum_probs=46.0
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+. . +.+.+++++|..+|.
T Consensus 83 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d-~------~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSI-GE-KLTDAEVDEMLREVS-D------GSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHS-S------SCSSEEHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHc-CC-CCCHHHHHHHHHHhc-C------CCCcCcHHHHHHHHh
Confidence 35677788888433 789999999999853 33 468888888888764 1 246799999998875
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=82.79 E-value=2.4 Score=34.45 Aligned_cols=66 Identities=9% Similarity=0.178 Sum_probs=49.6
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (561)
...+|..+|..|-.+ +.|+.++|...|+... . ..+.+++..++..+.. -+.+.++++.|..+|...
T Consensus 22 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~e~~~l~~~~d~------~~~g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 22 HYHAITQEFENFDTMKTNTISREEFRAICNRRV-Q-ILTDEQFDRLWNEMPV------NAKGRLKYPDFLSRFSSE 89 (105)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHT-C-CCCHHHHHHHHTTSCB------CTTSCBCHHHHHHHHC--
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHcCC------CCCCCCcHHHHHHHHhcc
Confidence 356788999998543 8999999999998763 3 3688888888876541 124579999999998843
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=82.76 E-value=2.4 Score=37.29 Aligned_cols=61 Identities=20% Similarity=0.160 Sum_probs=48.9
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+.++..+|..+-.+ +.|+.++|+.+|... + .+.+.+..++..+.. -+.+.++++.|..+|.
T Consensus 93 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g---~~~~~~~~~~~~~D~------d~dg~i~~~ef~~~~~ 155 (174)
T 1q80_A 93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGML-G---LDKTMAPASFDAIDT------NNDGLLSLEEFVIAGS 155 (174)
T ss_dssp HTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-T---CCGGGHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-C---CCHHHHHHHHHHhCC------CCCceEeHHHHHHHHH
Confidence 36788999998644 899999999999987 3 577788999888752 1346799999999886
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=82.75 E-value=1.6 Score=39.30 Aligned_cols=63 Identities=14% Similarity=0.304 Sum_probs=49.2
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+.++..+|..+-. + +.|+.++|..+|. +. ..+.+++..++..+... +.+.++++.|..+|.
T Consensus 120 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~---~~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~ 184 (191)
T 3khe_A 120 LSRERLLAAFQQFDSDGSGKITNEELGRLFG---VT-EVDDETWHQVLQECDKN------NDGEVDFEEFVEMMQ 184 (191)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHHHTT---SS-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCcCcCCHHHHHHHHc---cC-CCCHHHHHHHHHHhCCC------CCCCCCHHHHHHHHH
Confidence 345688899999853 3 8899999999997 44 47888999998887521 246799999999886
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A | Back alignment and structure |
|---|
Probab=82.74 E-value=1.8 Score=33.94 Aligned_cols=63 Identities=14% Similarity=0.350 Sum_probs=47.9
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEV--QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~~--~-~l~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.++..+|..|- .+ + .|+.++|+..|+.. -+. ..+.+.+..++..+... +.+.++++.|..++.
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~ 78 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGS-KLQDAEIARLMEDLDRN------KDQEVNFQEYVTFLG 78 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGG-GTTSHHHHHHHHHHHHT------TTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCC-CCCHHHHHHHHHHhCCC------CCCCCcHHHHHHHHH
Confidence 47888999997 35 6 89999999999863 333 35778899998887521 245699999998875
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.48 E-value=0.56 Score=35.16 Aligned_cols=65 Identities=23% Similarity=0.377 Sum_probs=49.1
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
+..++..+|..|-.+ +.++.++|..+|.... . ..+.+++..++..+.. -+.+.++++.|..++..
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~d~------~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLG-Q-PLPQEELDAMIREADV------DQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTT-C-SSCHHHHHHHHHHCCS------SSSSEEETTHHHHHHTC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHhh
Confidence 456889999988543 8899999999997643 3 4688888988887641 12356999999988753
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=82.44 E-value=1.9 Score=38.31 Aligned_cols=67 Identities=15% Similarity=0.315 Sum_probs=45.6
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCCCC
Q 008582 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINP 99 (561)
Q Consensus 25 ~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~ 99 (561)
.++..+|..|-.+ +.|+.++|+.+|.... . ..+.+++..++..+.. -+.+.++++.|..+|....+.
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g-~-~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~~~~~~ 152 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-E-KLTDEEVDEMIREADI------DGDGQVNYEEFVQMMTAKGGG 152 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC----CCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHSCC----
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHHHcCCC
Confidence 4577778877433 7788888888887643 3 3677888888887652 124679999999999865433
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=82.43 E-value=2.1 Score=45.29 Aligned_cols=67 Identities=15% Similarity=0.360 Sum_probs=50.5
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (561)
....+|..+|+.|=.+ +.|+.++|+.+|... ++ .++.+++.+||..+.. -+.+.++++.|.++|.++
T Consensus 372 d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~l-Ge-~LSdeEIdeLfke~D~------DgDGkIsyeEFvkmMtSK 440 (440)
T 3u0k_A 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GE-KLTDEEVDEMIREADI------DGDGQVNYEEFVQMMTAK 440 (440)
T ss_dssp --CHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-TC-CCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHC--
T ss_pred ChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHhCCC
Confidence 3567899999998543 889999999999865 44 4789999999988752 124679999999998763
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=82.39 E-value=2.4 Score=36.12 Aligned_cols=65 Identities=20% Similarity=0.330 Sum_probs=50.7
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
....++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++.. .. -+.+.++++.|..+|.+
T Consensus 82 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~-d~------~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL-GE-KMTEEEVEELMKG-QE------DSNGCINYEAFVKHIMS 148 (149)
T ss_pred chHHHHHHHHHHhCCCCCceEcHHHHHHHHHHh-CC-CCCHHHHHHHHhh-CC------CCCCcEeHHHHHHHHhc
Confidence 4467888999998644 889999999999875 44 4788899999887 41 12467999999999863
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=82.37 E-value=1.4 Score=38.20 Aligned_cols=63 Identities=21% Similarity=0.386 Sum_probs=44.9
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..|-.+ +.|+.++|+.+|.... . ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~d~------~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-E-TLTDEELRAMIEEFDL------DGDGEINENEFIAICT 159 (161)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT-C-CCCHHHHHHHHHTTCS------SSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHh
Confidence 45677888887543 7788888888887543 3 3677888888776641 1245689999998875
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=82.35 E-value=1.5 Score=36.97 Aligned_cols=64 Identities=11% Similarity=0.238 Sum_probs=46.2
Q ss_pred hHHHHHHHHhh-CC---CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-EN---GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~~---~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|- .+ +.|+.++|+.+|+..-++...+.+++.+||..+.. -+.+.++++.|..+|.
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~------d~dG~Idf~EF~~~~~ 89 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDV------NQDSELKFNEYWRLIG 89 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCC------CCCCCCcHHHHHHHHH
Confidence 46888899997 33 48999999999986444322233568888887651 1346799999998875
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=82.30 E-value=2.2 Score=37.09 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=47.8
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 26 ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
++..+|..+-.+ +.|+.++|..+|.... .+.+++..++..+.. -+.+.++++.|..+|..
T Consensus 99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~----~~~~~~~~~~~~~D~------d~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 99 FLHAALGVADTDGDGAVTVADTARALTAFG----VPEDLARQAAAALDT------DGDGKVGETEIVPAFAR 160 (166)
T ss_dssp HHHHHHHHHCSSSSSCCBHHHHHHHHHHTT----CCHHHHHHHHHHHCT------TCSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhC----CCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHHH
Confidence 488899888643 8999999999998653 688899999988752 13467999999998863
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=82.28 E-value=1.7 Score=37.05 Aligned_cols=63 Identities=11% Similarity=0.348 Sum_probs=45.3
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....+..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+. . +.+.++++.|..+|.
T Consensus 77 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d-~------~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 77 SEDILRQAFRTFDPEGTGYIPKAALQDALLNL-GD-RLKPHEFAEFLGITE-T------EKGQIRYDNFINTMF 141 (142)
T ss_dssp CHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHHC-C------SSSEECSHHHHTTTC
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-CC-CCCHHHHHHHHHHhC-C------CCCcEeHHHHHHHHc
Confidence 456778888887533 788888888888753 33 367788888888764 2 235688888888775
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=82.19 E-value=2.1 Score=37.09 Aligned_cols=66 Identities=24% Similarity=0.463 Sum_probs=52.2
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
.....+..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+... +.+.++++.|..+|.+
T Consensus 88 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~d------~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 88 QMQQELREAFRLYDKEGNGYISTDVMREILAEL-DE-TLSSEDLDAMIDEIDAD------GSGTVDFEEFMGVMTG 155 (158)
T ss_dssp TTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHH-CT-TCCHHHHHHHHHHHCSS------CCSEECSHHHHHHTSS
T ss_pred hHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-CC-cCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHhc
Confidence 4456799999999644 899999999999865 44 36889999999887521 2456999999999874
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=82.14 E-value=0.95 Score=41.87 Aligned_cols=67 Identities=10% Similarity=0.218 Sum_probs=48.4
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
....+..+|..|-.+ +.|+.++|+.+|.........+.+.+..++..+.. -+.+.+++++|..+|..
T Consensus 127 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~------d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 127 KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDL------NGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp SHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCT------TCSSSEEHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcC------CCCCcCcHHHHHHHHHc
Confidence 456788899998543 88999999999986532223577788888888752 13467999999999874
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=81.88 E-value=4 Score=35.03 Aligned_cols=63 Identities=17% Similarity=0.370 Sum_probs=48.0
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++...|..|-.+ +.|+.++|+.+|... ++ ..+.+++..+|..+.. -+.+.++++.|..+|.
T Consensus 78 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~------d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 78 KEEILKAFKLFDDDETGKISFKNLKRVAKEL-GE-NLTDEELQEMIDEADR------DGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCT------TSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHc
Confidence 35788889888543 889999999999754 44 4688899999987652 1346799999998774
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=81.78 E-value=1.2 Score=34.47 Aligned_cols=67 Identities=12% Similarity=0.314 Sum_probs=50.8
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (561)
.+..++. +|..|-.+ +.|+.++|...|...... ..+.+++..++..+... +.+.++++.|..++...
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEE-PLTDAEVEEAMKEADED------GNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTC-CCCHHHHHHHHHHHCSS------GGGSEEHHHHHHHHHCC
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCC-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHhh
Confidence 4567899 99999654 889999999999865213 46888999999887521 24579999999988743
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A | Back alignment and structure |
|---|
Probab=81.52 E-value=2.1 Score=33.08 Aligned_cols=66 Identities=17% Similarity=0.283 Sum_probs=46.0
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHH----HHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQA----IIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~----ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
....++..+|..|-.+ +.++.++|..+|.........+.+++.. ++..+. .-+.+.+++++|...+
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D------~~~dg~I~~~eF~~~~ 75 (83)
T 1yx7_A 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMAD------KNSDGKISKEEFLNAN 75 (83)
T ss_dssp CSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTC------SSSCSCCSHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhC------CCCCCCCcHHHHHHhh
Confidence 3456899999999644 8999999999999764212356666777 544432 1134579999999654
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=81.40 E-value=4.5 Score=36.87 Aligned_cols=67 Identities=12% Similarity=0.259 Sum_probs=48.5
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHH---HHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKE---DAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~---~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....++..+|..|-.+ +.|+.++|+.+|........++.+ .+..++..+.. -+.+.++++.|..+|.
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~------d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 119 LSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDK------NNDGKIDFHEFSEMMK 190 (191)
T ss_dssp CCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCS------SSSSSBCHHHHHHHHC
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcC------CCCCeECHHHHHHHHc
Confidence 4557889999998543 899999999999875433345553 46777776541 1346799999999873
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=81.17 E-value=0.99 Score=38.82 Aligned_cols=67 Identities=12% Similarity=0.314 Sum_probs=51.7
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
.....++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+.. -+.+.++++.|..+|.+
T Consensus 79 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~------d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 79 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL-GE-KLTDAEVDELLKGVEV------DSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp CCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-TT-CCCHHHHHHHHTTCCC------CTTSEEEHHHHHHHHHC
T ss_pred cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHhc
Confidence 34567899999999644 889999999999865 44 4788889988876541 12456999999998864
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=81.12 E-value=1.9 Score=38.42 Aligned_cols=68 Identities=13% Similarity=0.038 Sum_probs=51.6
Q ss_pred CCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 17 HVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 17 ~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|.....+.++..+|..|-.+ ..|+.++++.+|+.. .++.+++.+|++.... -+.+.|+++.|...|.
T Consensus 43 ~W~~~~e~~~l~~~F~~fDd~dG~Is~~El~~~l~~~----gl~~~el~~I~~~~D~------d~dG~Ld~~EF~~am~ 111 (139)
T 2jq6_A 43 EWVVGKDKPTYDEIFYTLSPVNGKITGANAKKEMVKS----KLPNTVLGKIWKLADV------DKDGLLDDEEFALANH 111 (139)
T ss_dssp CCGGGGTHHHHHHHHHHSCCSSSEEEHHHHHHHHHHT----TCCHHHHHHHHHHHCS------SCCSEEEHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhCCCCCeECHHHHHHHHHHh----CcCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 344445688899999999732 889999999999862 3678889999887541 1345699999998765
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=80.97 E-value=4.4 Score=36.99 Aligned_cols=68 Identities=16% Similarity=0.157 Sum_probs=50.5
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc---------------CCCCCCHHHHHHHHHHHHhhhhhhhhccCCC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ---------------KEDKASKEDAQAIIDSLRELKHLNIFQRRGL 84 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q---------------~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l 84 (561)
.+..++..+|..|-.+ +.|+.++|..+|.... ++...+.+.+..++..+.. -+.+.+
T Consensus 92 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~------d~dG~I 165 (204)
T 1jba_A 92 TLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDE------NGDGQL 165 (204)
T ss_dssp CCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCC------SCCSCB
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCC------CCCCeE
Confidence 3566899999998643 8999999999998762 1222455678888888752 134679
Q ss_pred CHHHHHHhhcC
Q 008582 85 NLEAFFKYLFG 95 (561)
Q Consensus 85 ~~~gF~~~L~s 95 (561)
+++.|..+|.+
T Consensus 166 s~~Ef~~~~~~ 176 (204)
T 1jba_A 166 SLNEFVEGARR 176 (204)
T ss_dssp CHHHHHHHHTT
T ss_pred cHHHHHHHHHc
Confidence 99999999984
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=80.81 E-value=2.6 Score=38.90 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=50.5
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHH----HHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAI----IDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~i----i~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
...++..+|..|-.+ +.|+.++|+.+|....+.. .+.+++..+ +..+. .-+.+.++++.|..+|..
T Consensus 111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~-~s~~~~~~l~~~~~~~~D------~d~dG~Is~~EF~~~~~~ 182 (208)
T 2ct9_A 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVN-ISDEQLGSIADRTIQEAD------QDGDSAISFTEFVKVLEK 182 (208)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTT-CCHHHHHHHHHHHHHHHC------SSSSSSEEHHHHHHTTTT
T ss_pred HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHhC------CCCCCcCcHHHHHHHHhc
Confidence 456788999998644 8899999999999876663 688888888 44432 113467999999998874
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=80.79 E-value=1.5 Score=35.76 Aligned_cols=62 Identities=8% Similarity=0.052 Sum_probs=47.0
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+.++..+|..|-.+ +.|+.++|+.+|+.. ..+.+++.+|+..+.. -+.+.+++++|...|.
T Consensus 8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~----g~~~~~~~~i~~~~D~------d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKT----GLPSTLLAHIWSLCDT------KDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTT----TCCHHHHHHHHHHHCT------TCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc----CCCHHHHHHHHHHHCC------CCCCcCCHHHHHHHHH
Confidence 356788889998543 889999999999753 3678888988887641 1346799999988765
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=80.68 E-value=1.8 Score=34.92 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=45.6
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+.++..+|..+-.+ +.|+.++|+.+|+.. + .+.+++.+|+..+.. -+.+.++++.|...|.
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-g---~~~~~~~~i~~~~D~------d~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS-K---LPILELSHIWELSDF------DKDGALTLDEFCAAFH 70 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH-S---SCHHHHHHHHHHHCT------TCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHHCC------CCCCCCCHHHHHHHHH
Confidence 34677778888543 889999999999865 2 567888888887541 1245699999998765
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
Probab=80.65 E-value=1.5 Score=35.22 Aligned_cols=63 Identities=16% Similarity=0.264 Sum_probs=44.7
Q ss_pred hHHHHHHHHhhC-C--C-CcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSE-N--G-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~-~--~-~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|..+|..|-. + + .|+.++|+.+|...-+.. .+.+++..++..+.. -+.+.++++.|..++.
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~-~~~~~~~~l~~~~D~------d~dG~I~~~EF~~~~~ 76 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQY-IRKKGADVWFKELDI------NTDGAVNFQEFLILVI 76 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHH-HHTTCHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCccc-CCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHH
Confidence 478889999976 5 6 899999999995433321 233456777776541 1246799999998875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 561 | ||||
| d2zkmx4 | 349 | c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human | 1e-102 | |
| d1qasa3 | 327 | c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (P | 2e-99 | |
| d1qasa2 | 131 | b.7.1.1 (A:626-756) PI-specific phospholipase C is | 3e-27 | |
| d2zkmx2 | 122 | b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human | 4e-24 | |
| d1qasa1 | 94 | a.39.1.7 (A:205-298) Phosphoinositide-specific pho | 4e-17 | |
| d1w15a_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegi | 2e-15 | |
| d1a25a_ | 132 | b.7.1.2 (A:) C2 domain from protein kinase c (beta | 4e-14 | |
| d1uowa_ | 157 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 1e-12 | |
| d2cm5a1 | 137 | b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat ( | 8e-12 | |
| d2plca_ | 274 | c.1.18.2 (A:) Phosphatidylinositol-specific phosph | 1e-11 | |
| d2ptda_ | 296 | c.1.18.2 (A:) Phosphatidylinositol-specific phosph | 2e-10 | |
| d2bwqa1 | 125 | b.7.1.2 (A:729-853) Regulating synaptic membrane e | 8e-10 | |
| d1dqva2 | 145 | b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus | 4e-09 | |
| d1wfja_ | 136 | b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cr | 3e-08 | |
| d1dqva1 | 130 | b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus | 4e-08 | |
| d1rsya_ | 143 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 4e-08 | |
| d1ugka_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens | 2e-07 | |
| d1rh8a_ | 142 | b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [Tax | 1e-06 | |
| d2ep6a1 | 126 | b.7.1.1 (A:92-217) Multiple C2 and transmembrane d | 1e-06 | |
| d1gmia_ | 136 | b.7.1.1 (A:) Domain from protein kinase C epsilon | 3e-06 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 8e-05 | |
| d1wfma_ | 138 | b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapie | 8e-04 |
| >d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 349 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 310 bits (795), Expect = e-102
Identities = 93/319 (29%), Positives = 153/319 (47%), Gaps = 12/319 (3%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
HDMT P++HYFI + HN+YLT Q + S + L G R +ELD W D +
Sbjct: 1 HDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPI 60
Query: 169 L-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEI 226
+ HG TMT + + + +I E AF S YP++++ E+H+ +P QAK+AE G++
Sbjct: 61 ITHGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDM 120
Query: 227 LFTPGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEE 281
L T E PSPE L+ +I+I K + K+ +++ +
Sbjct: 121 LLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPA 180
Query: 282 AWGKEVPNLKSLNNSACDKDDFDGGVDNDEED---SDDKSQHNEAPEYRKLIA-IHAGKP 337
W E ++++ G +D +E SD+ + E Y ++ + ++ +P
Sbjct: 181 VWAGEEGTELEEEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQP 240
Query: 338 KGGLKECLKVDPDKVRRL-SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 396
+ ++ + S +E + + + V + +R + RIYPKG R+DSSNY
Sbjct: 241 TKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNY 300
Query: 397 NPLIGWSHGAQMVAFNMQT 415
P + W+ G QMVA N QT
Sbjct: 301 MPQMFWNAGCQMVALNFQT 319
|
| >d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 327 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C isozyme D1 (PLC-D1) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 302 bits (774), Expect = 2e-99
Identities = 96/303 (31%), Positives = 134/303 (44%), Gaps = 23/303 (7%)
Query: 114 PVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173
P+SHY + + HN+YL +QL S IRAL KG R +ELD W ++ + + HG T
Sbjct: 3 PLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI-IYHGYT 61
Query: 174 MTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT-PGS 232
T+ + LR+I++YAF AS YPV+++LE+H + + Q +A + LG IL P
Sbjct: 62 FTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLD 121
Query: 233 ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 292
PSPE LK +I++ K L A E E + A E
Sbjct: 122 GVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENGSEATDVSDEVEAAEME---------- 171
Query: 293 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKV 352
D V + + + + PE +I GG
Sbjct: 172 -----------DEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQAFY 220
Query: 353 RRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFN 412
S SE + + GN VR L RIYP G R DSSNY+P+ W+ G Q+VA N
Sbjct: 221 EMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALN 280
Query: 413 MQT 415
QT
Sbjct: 281 FQT 283
|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 104 bits (260), Expect = 3e-27
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI-PSW 490
+ L+V + G+ P + + S D V I GV DT ++T + +N P W
Sbjct: 4 ERLRVRIISGQ----QLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRW 59
Query: 491 NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 550
+ EFEF ++VP+LAL+R V +YD S K+DF GQ+ +P + LKQG R V L + G+++
Sbjct: 60 DMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHP 119
Query: 551 SVKLLMHFEF 560
S L +
Sbjct: 120 SATLFVKISI 129
|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 122 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.4 bits (237), Expect = 4e-24
Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTL---EDNWIPS 489
TL +TV G F + Y V + G+P D + L ++ P
Sbjct: 2 TLSITVISG----------QFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPV 51
Query: 490 WNEE--FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 547
W EE + +PELA LR+ V E + F G +P++ L G + LH
Sbjct: 52 WKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNM 107
Query: 548 RYKSVKLLMHFE 559
L + E
Sbjct: 108 PLTMPALFIFLE 119
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 74.5 bits (183), Expect = 4e-17
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 27 VKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ F++ + + T++V+ L FL Q+E++A A ++I+ +R +
Sbjct: 10 IDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYE--PSETAKAQRQMT 67
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDM 111
+ F YL S V+ DM
Sbjct: 68 KDGFLMYLLSADGNAFSLAHRRVYQDM 94
|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 71.3 bits (174), Expect = 2e-15
Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 8/112 (7%)
Query: 428 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 487
TL V V D D Y +V + KKT +
Sbjct: 11 QSTTNTLTVVVLKARHL------PKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPN 64
Query: 488 PSWNEEFEFPLSVPELAL--LRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 537
+NE F F + L + V + + +++ G+ L + G
Sbjct: 65 AVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGG 116
|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 67.0 bits (163), Expect = 4e-14
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHE 512
D D Y ++ + P +KTKT++ + P WNE F F L + L +E+ +
Sbjct: 31 DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 90
Query: 513 YDMSEKDDFGGQTCLPVSELKQGIRAV--PLHDRKGERYKSV 552
+D++ ++DF G +SEL++ L ++ Y +V
Sbjct: 91 WDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNV 132
|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.3 bits (153), Expect = 1e-12
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 428 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 487
+P L V + + D D Y ++ + KKT ++
Sbjct: 21 VPTAGKLTVVILEAKNL------KKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLN 74
Query: 488 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 537
P +NE F F + ++ + + V +YD K+D G+ + + +R
Sbjct: 75 PYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELR 126
|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 137 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2b-domain of rabphilin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 60.6 bits (146), Expect = 8e-12
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%)
Query: 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 488
+ L V + DA D + ++ + KT+ + P
Sbjct: 12 TQQGGLIVGIIRCVHL------AAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNP 65
Query: 489 SWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRK 545
+NEEF + + +LA L I V +YD+ + +D+ G L +S + ++ K
Sbjct: 66 EFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNK 125
Query: 546 GER 548
++
Sbjct: 126 DKK 128
|
| >d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Listeria monocytogenes [TaxId: 1639]
Score = 63.3 bits (153), Expect = 1e-11
Identities = 20/152 (13%), Positives = 59/152 (38%), Gaps = 15/152 (9%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-------CSDVPIIRALQKGVRVIELDIWPN 160
T ++ I H++ + + + + L+ G+R I++
Sbjct: 9 ALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK-- 66
Query: 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITL-EDHLTPDLQAKVAEMV 219
DN+++ HG L L +I ++ + +++ L ++ + D + +
Sbjct: 67 ---DNLNIYHGPIFL-NASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPL 122
Query: 220 TQTLGEILFT-PGSECLKEFPSPESLKRRIII 250
+ +T P ++ + P+ + ++ +I++
Sbjct: 123 INIYKDYFYTTPRTDTSNKIPTLKDVRGKILL 154
|
| >d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} Length = 296 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Bacillus cereus [TaxId: 1396]
Score = 59.5 bits (143), Expect = 2e-10
Identities = 21/149 (14%), Positives = 49/149 (32%), Gaps = 10/149 (6%)
Query: 108 HHDMTAPVSHYFIYTGHNSY-----LTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162
+ P++ I H+S Q+ + + G R+ ++
Sbjct: 16 PIPDSIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLT-- 73
Query: 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQT 222
DN VLH G + V L + + K++ ++++L+ + + T
Sbjct: 74 DDNTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDM--KGAEDSFSST 131
Query: 223 LGEILF-TPGSECLKEFPSPESLKRRIII 250
+ F P + + +I++
Sbjct: 132 FEKKYFVDPIFLKTEGNIKLGDARGKIVL 160
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Regulating synaptic membrane exocytosis protein, rim2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 8e-10
Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 11/109 (10%)
Query: 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 488
L VT+ + + P + Y ++ +D ++TKT++ P
Sbjct: 11 KVGHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEP 64
Query: 489 SWNEEFEFPLSVP---ELALLRIEVHEYDM--SEKDDFGGQTCLPVSEL 532
WN+ F + +L I + + E+ +F G+ + +
Sbjct: 65 KWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETA 113
|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 53.3 bits (127), Expect = 4e-09
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 8/107 (7%)
Query: 428 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 487
LP L VT+ D D Y + + +KT ++
Sbjct: 16 LPTAGLLTVTIIKASNLK------AMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLN 69
Query: 488 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSEL 532
P++NE F ++ + L I V +YD ++ G +
Sbjct: 70 PTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAA 116
|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain protein At1g63220 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 50.5 bits (120), Expect = 3e-08
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 14/129 (10%)
Query: 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 492
TL+V + +G D + D Y ++ K P WNE
Sbjct: 11 TLEVVLVSAKGL------EDADFLNNMDPYVQLTCR----TQDQKSNVAEGMGTTPEWNE 60
Query: 493 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ--GIRAVPLHDRKGERYK 550
F F +S L+ ++ + D+ +DD G+ +P+ + I + K E YK
Sbjct: 61 TFIFTVSEGTTE-LKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYK 119
Query: 551 -SVKLLMHF 558
+ + + F
Sbjct: 120 GEIWVALSF 128
|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.0 bits (118), Expect = 4e-08
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 11/117 (9%)
Query: 428 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 487
L L V + + D Y I +P +TK
Sbjct: 14 LYGSDQLVVRILQALDLPAKDSNGFSDPYVK--------IYLLPDRKKKFQTKVHRKTLN 65
Query: 488 PSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLP-VSELKQGIRAVPL 541
P +NE F+F + + ELA L V+++D + D GQ L + EL + PL
Sbjct: 66 PIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPL 122
|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 143 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.1 bits (119), Expect = 4e-08
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 488
L V + D D Y +V + +P +TK P
Sbjct: 31 FQNNQLLVGIIQAAELPA------LDMGGTSDPYVKVFL--LPDKKKKFETKVHRKTLNP 82
Query: 489 SWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 535
+NE+F F + EL L + V+++D K D G+ +P++ + G
Sbjct: 83 VFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 131
|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (115), Expect = 2e-07
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 10/110 (9%)
Query: 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 488
+K V + P + + D Y ++ I +P KT+ L P
Sbjct: 19 FERKAFVVNIKEAR----GLPAMDEQSMTS-DPYIKMTI--LPEKKHKVKTRVLRKTLDP 71
Query: 489 SWNEEFEF---PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 535
+++E F F P + + L + +D +DD G+ +P+S ++
Sbjct: 72 AFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121
|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 142 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Piccolo species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.0 bits (108), Expect = 1e-06
Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 9/121 (7%)
Query: 433 TLKVTVYMGEGWYYDFPHTHFDAY---SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPS 489
L + + + + D + +V + + ++TK ++ + P
Sbjct: 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPE 78
Query: 490 WNEEFEF---PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV---PLHD 543
WN+ + + L + V +YD +DF G+ + +S PL +
Sbjct: 79 WNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138
Query: 544 R 544
+
Sbjct: 139 Q 139
|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 1e-06
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 13/130 (10%)
Query: 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 492
L+V V D D + + +T T+ N P WN+
Sbjct: 7 ILQVKVLKAAD------LLAADFSGKSDPFCLL-----ELGNDRLQTHTVYKNLNPEWNK 55
Query: 493 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKS 551
F FP+ +L + V + D + DF G+ +P+ ++ G L ++ E+
Sbjct: 56 VFTFPI-KDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFK 114
Query: 552 VKLLMHFEFI 561
+ + + I
Sbjct: 115 GVIYLEMDLI 124
|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C epsilon species: Rat (Rattus rattus) [TaxId: 10117]
Score = 44.9 bits (105), Expect = 3e-06
Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Query: 433 TLKVTVYMGEGW-YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWN 491
LK+ + + P F IA D+ + +T T + P+W+
Sbjct: 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWH 66
Query: 492 EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 535
+EF V + + V DDF + EL Q
Sbjct: 67 DEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQN 108
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (96), Expect = 8e-05
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKED--------KASKEDAQAIIDSLRELKHL 76
+ +F Y MT +HL +F+ + Q++ A + Q +ID + +
Sbjct: 80 IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLID---KYEPS 136
Query: 77 NIFQRRG-LNLEAFFKYLFGDINPPLSPTPVVHH 109
I +RG L+ E +L G N L+ ++ H
Sbjct: 137 GINAQRGQLSPEGMVWFLCGPENSVLAQDKLLLH 170
|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin XIII species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 8e-04
Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 19/129 (14%)
Query: 414 QTGPHNEVFDPKVKL-----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIA 468
+G N+ PK+ K L VT + D Y G
Sbjct: 5 SSGSWNQA--PKLHYCLDYDCQKAELFVTRLEAVT---------SNHDGGCDCYV-QGSV 52
Query: 469 GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE--KDDFGGQTC 526
+V +T + +W E PL+ EL + + + G+
Sbjct: 53 ANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELR 112
Query: 527 LPVSELKQG 535
L +
Sbjct: 113 LGLDGTSVP 121
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 561 | |||
| d1qasa3 | 327 | Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n | 100.0 | |
| d2zkmx4 | 349 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 100.0 | |
| d2zkmx2 | 122 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.93 | |
| d1qasa2 | 131 | PI-specific phospholipase C isozyme D1 (PLC-D1), C | 99.93 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 99.73 | |
| d2ep6a1 | 126 | Multiple C2 and transmembrane domain-containing pr | 99.68 | |
| d1rlwa_ | 126 | Domain from cytosolic phospholipase A2 {Human (Hom | 99.61 | |
| d1a25a_ | 132 | C2 domain from protein kinase c (beta) {Rat (Rattu | 99.59 | |
| d1w15a_ | 138 | Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: | 99.56 | |
| d2nq3a1 | 133 | E3 ubiquitin-protein ligase Itchy {Human (Homo sap | 99.55 | |
| d2cm5a1 | 137 | C2b-domain of rabphilin {Rat (Rattus norvegicus) [ | 99.52 | |
| d1rsya_ | 143 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.5 | |
| d1wfja_ | 136 | C2 domain protein At1g63220 {Thale cress (Arabidop | 99.5 | |
| d1uowa_ | 157 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.48 | |
| d1rh8a_ | 142 | Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.45 | |
| d1wfma_ | 138 | Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9 | 99.45 | |
| d1dqva1 | 130 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.45 | |
| d2bwqa1 | 125 | Regulating synaptic membrane exocytosis protein, r | 99.44 | |
| d1gmia_ | 136 | Domain from protein kinase C epsilon {Rat (Rattus | 99.41 | |
| d1ugka_ | 138 | Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 | 99.41 | |
| d1dqva2 | 145 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.34 | |
| d2cjta1 | 128 | Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: | 99.34 | |
| d2ptda_ | 296 | Phosphatidylinositol-specific phospholipase C {Bac | 99.19 | |
| d1bdya_ | 123 | Domain from protein kinase C delta {Rat (Rattus no | 99.18 | |
| d2plca_ | 274 | Phosphatidylinositol-specific phospholipase C {Lis | 98.86 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.84 | |
| d1vd6a1 | 217 | Putative glycerophosphodiester phosphodiesterase T | 96.32 | |
| d1e7ua2 | 174 | Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) | 96.1 | |
| d1zcca1 | 240 | Glycerophosphodiester phosphodiesterase UgpQ {Agro | 95.88 | |
| d1o1za_ | 226 | Hypothetical protein TM1621 {Thermotoga maritima [ | 94.83 | |
| d1ydya1 | 328 | Glycerophosphodiester phosphodiesterase GlpQ {Esch | 94.56 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 93.79 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 92.74 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 92.73 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 92.18 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 92.13 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 91.83 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 91.49 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 91.48 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 90.63 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 90.34 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 90.31 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 90.15 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 90.09 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 89.97 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 89.39 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 89.38 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 89.37 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 89.25 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 88.77 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 88.75 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 88.75 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 88.37 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 88.19 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 88.17 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 87.8 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 87.3 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 86.72 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 86.7 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 86.54 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 86.15 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 86.08 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 85.72 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 85.43 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 85.12 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 85.0 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 84.74 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 83.56 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 83.53 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 81.04 |
| >d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C isozyme D1 (PLC-D1) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-91 Score=726.78 Aligned_cols=295 Identities=32% Similarity=0.481 Sum_probs=234.9
Q ss_pred CCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhhc
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYA 191 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~A 191 (561)
||||+||||+|||||||+|+||.|.||++||++||++||||||||||||++ ++|||+||||+|++|+|+|||+||++||
T Consensus 1 ~~PLs~YfI~SShNtyl~g~Ql~~~ss~~~~~~~l~~G~R~ielD~w~g~d-~ePvV~HG~t~ts~I~F~dvl~~Ik~~A 79 (327)
T d1qasa3 1 DQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAIRDYA 79 (327)
T ss_dssp CSCGGGEEEEEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGG-GCCEESCTTSCCCCEEHHHHHHHHHHHT
T ss_pred CCCcccceeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCccccceeHHHHHHHHHHhc
Confidence 699999999999999999999999999999999999999999999999976 4799999999999999999999999999
Q ss_pred cccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhhhhcc
Q 008582 192 FVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKEND 270 (561)
Q Consensus 192 F~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~ 270 (561)
|.+|+|||||||||||+.+||.+||++|+++|||+||.++. +....+|||++||||||||+|+.....+..... +
T Consensus 80 F~~S~yPlILsLe~H~~~~qq~~ma~~l~~~fGd~L~~~~~~~~~~~~psp~~Lk~KIlik~K~~~~~~~~~~~~----~ 155 (327)
T d1qasa3 80 FKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGEN----G 155 (327)
T ss_dssp TTSCSSCEEEEEEECCCHHHHHHHHHHHHHHTGGGBCCSCCTTCCSSCCCTGGGTTCEEEEECCCCC-------------
T ss_pred CCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhccCCCcccccccCCCHHHHhhhhhhccccccccccccccc----C
Confidence 99999999999999999999999999999999999999764 446789999999999999999875443322100 0
Q ss_pred ccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccccCCC
Q 008582 271 SQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPD 350 (561)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 350 (561)
..+.+..+. ..... .++... .........+....+.++|++|+.|+.++.++++.........
T Consensus 156 -----------~~~~~~~~~---~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~eLs~li~~~~~~~~~~~~~~~~~~~~ 218 (327)
T d1qasa3 156 -----------SEATDVSDE---VEAAE-MEDEAV--RSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQA 218 (327)
T ss_dssp --------------------------------------------------CCCHHHHTTCSSEEECCCCCCCTTSSCSCC
T ss_pred -----------ccCCCcccc---ccccc-cccchh--hhhhhcccchhhhHhhHHHHhHHHHhcCccCCCccchhhcCCc
Confidence 000000000 00000 000000 0001111122345678999999999888777776654433344
Q ss_pred ceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecc---------------c
Q 008582 351 KVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ---------------T 415 (561)
Q Consensus 351 ~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~Q---------------n 415 (561)
.++++|++|.++.+++++++.++++||+++|+||||+|+|+|||||||+.+|++|||||||||| |
T Consensus 219 ~~~~~S~sE~~~~~l~~~~~~~l~~~nk~~l~rvyP~g~ridSsNy~P~~~w~~G~Q~valN~Qt~D~~m~ln~~~F~~N 298 (327)
T d1qasa3 219 FYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDN 298 (327)
T ss_dssp TTEEEEEEHHHHHHHHHHHTHHHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCSHHHHHHHHHTTSG
T ss_pred ceeeeecCHHHHHHHHHHhhHHHHHHHHhheEEEecCCCCCCCCCCChHHHHhcCCcEEEEeccCCChhHHHHHHHHHhc
Confidence 6789999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred CCCCcccCCCCCC
Q 008582 416 GPHNEVFDPKVKL 428 (561)
Q Consensus 416 G~~Gyvl~P~~~~ 428 (561)
|+|||||||...+
T Consensus 299 G~~GyVLKP~~Lr 311 (327)
T d1qasa3 299 GGCGYVLKPAFLR 311 (327)
T ss_dssp GGCSEEECCGGGS
T ss_pred CCcceEECCHHHc
Confidence 9999999997543
|
| >d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-90 Score=721.56 Aligned_cols=314 Identities=29% Similarity=0.468 Sum_probs=233.2
Q ss_pred CCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHHHHHHHH
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+||++||+||||+|||||||+|+|+.|.||++||++||++||||||||||||. .+++|||+||+|+|++|+|+|||++|
T Consensus 1 ~DM~~PL~~y~I~SShNtyl~g~q~~~~~s~~~~~~~l~~G~R~~eldi~dG~~~d~~Pvv~hg~t~t~~i~f~~v~~~I 80 (349)
T d2zkmx4 1 HDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDIFFKEAIEAI 80 (349)
T ss_dssp SCCCSCGGGEEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSCCCEEHHHHHHHH
T ss_pred CCCCCchhhheeeccccccccCCcCCCcccHHHHHHHHHhCCcEEEEEecCCCCCCCCcEEeeCCeecCceEHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999984 34689999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhhh
Q 008582 188 KEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEA 261 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (561)
++|||.+|+||||||||+|| +++||.+||++|+++||++|+.++.+ ....+|||++||||||||+|+.......
T Consensus 81 ~~~aF~~s~~PliL~le~h~~~~~~q~~~a~~l~~~~g~~L~~~~~~~~~~~~~~~~pSP~~Lk~KIlik~K~~~~~~~~ 160 (349)
T d2zkmx4 81 AESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPT 160 (349)
T ss_dssp HHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCCTTTTTTCEEEECCCC------
T ss_pred HHhcccCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHhhhccCcccccccCcCCCCCCHHHhcCcEEEEecCCcccccc
Confidence 99999999999999999999 79999999999999999999997633 2467999999999999999986543322
Q ss_pred HhhhhhhccccCCCCCCccccc-cCCCCCccccCCCCCCCCCCCCCCCCCCC---------ccccccccccchhhhccce
Q 008582 262 KEEKEKENDSQRGKGSADEEAW-GKEVPNLKSLNNSACDKDDFDGGVDNDEE---------DSDDKSQHNEAPEYRKLIA 331 (561)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~ 331 (561)
....+.............+..+ +.+...+..... .+++ +......+. +........+.++|++|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~ 236 (349)
T d2zkmx4 161 SSSKDTGGEAEGSSPPSAPAVWAGEEGTELEEEEV---EEEE-EEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVN 236 (349)
T ss_dssp ------------------------------------------------CCSHHHHHHHHHTTGGGGGCCCCCHHHHTTCS
T ss_pred ccccccccccccCCCCcccccccCccccccccccc---cccc-cccccccchhhhhhhccccccccccccchHHHHhhHh
Confidence 2111000000000000000000 000000000000 0000 000000000 0111122456788999998
Q ss_pred eccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeee
Q 008582 332 IHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAF 411 (561)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVAL 411 (561)
|+.+..+..+...... ...+.++||+|.++.++++.++.+|++||+++|+||||+|+|+|||||||+.||++|||||||
T Consensus 237 y~~~~~~~~~~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~li~~Nk~~L~RVYP~g~RvdSSNynP~~~W~~GcQ~VAL 315 (349)
T d2zkmx4 237 YIQPTKFVSFEFSAQK-NRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVAL 315 (349)
T ss_dssp SCEECCCCCHHHHHHH-TCTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSEEEEECCTTCTTCCCCCSHHHHHTTCSEECB
T ss_pred hhcCCccccchhhccc-CcceEEEecCHHHHHHHHHHhHHHHHHHhhccEEEECcCCCcCCCCCCCcHHHHhcCccEeEe
Confidence 8776655555444333 235678999999999999999999999999999999999999999999999999999999999
Q ss_pred ecc---------------cCCCCcccCCCCC
Q 008582 412 NMQ---------------TGPHNEVFDPKVK 427 (561)
Q Consensus 412 N~Q---------------nG~~Gyvl~P~~~ 427 (561)
||| ||+|||||||...
T Consensus 316 N~Qt~D~~m~ln~g~F~~NG~cGYVLKP~~L 346 (349)
T d2zkmx4 316 NFQTMDLPMQQNMAVFEFNGQSGYLLKHEFM 346 (349)
T ss_dssp CTTCCSHHHHHHHHHTTTGGGCSEEECCGGG
T ss_pred cccCCCHHHHHHHHHHHhcCCcCeEECCHHH
Confidence 999 8999999999753
|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.3e-26 Score=203.41 Aligned_cols=114 Identities=31% Similarity=0.489 Sum_probs=97.8
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCcee-eecccC--CCCCCCccccE-EEE-eeecCCceEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM-KKTKTL--EDNWIPSWNEE-FEF-PLSVPELALLR 507 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k-~kTkvi--~nn~nP~WNE~-f~F-~v~~pela~Lr 507 (561)
+|+|+||+||+|+.. ..||||+|++.|.|.|..+ .+|+++ .|++||+|||+ |.| .+..+++++|+
T Consensus 2 tl~V~Visaq~L~~~----------~~dPyV~V~l~g~~~D~~~~~~t~~~~~~n~~nP~wne~~~~~~~~~~~~l~~L~ 71 (122)
T d2zkmx2 2 TLSITVISGQFLSER----------SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR 71 (122)
T ss_dssp EEEEEEEEEESCCSS----------CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred EEEEEEEEeeCCCCC----------CCCcEEEEEEECcCCCCCccEEEEEEEeCCeecceEcccEeEEEecCCCcccEEE
Confidence 689999999999631 3699999999999888543 345443 45699999976 444 56788999999
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.|||+| +++||++++||++|++|||||||+|+.|++++.|+|||||++
T Consensus 72 f~V~D~d----~~~lG~~~ipl~~l~~GyR~vpL~~~~g~~l~~~~L~v~i~~ 120 (122)
T d2zkmx2 72 VAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEM 120 (122)
T ss_dssp EEEEETT----TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EEEECCC----CCEEEEEEEEcccCcCCceEEEccCCCcCCCCCceEEEEEEE
Confidence 9999975 799999999999999999999999999999999999999986
|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=5.8e-26 Score=203.01 Aligned_cols=125 Identities=36% Similarity=0.563 Sum_probs=111.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCC-CCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
++|+|+|++|++|+.. ..+..+.+||||+|.+.|.+.+..++||++++++ +||.|||+|.|.+..++.+.|+|.|
T Consensus 4 ~~l~V~Vi~a~~L~~~----~~~~~~~~DPyV~v~l~g~~~~~~~~~T~~v~~~~~nP~wne~f~f~~~~~~~~~L~~~V 79 (131)
T d1qasa2 4 ERLRVRIISGQQLPKV----NKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMV 79 (131)
T ss_dssp EEEEEEEEEEESCCCC----C-----CCCEEEEEEEESSTTTCEEEECCCCSSCSSSCEEEEEEEEEESCGGGCEEEEEE
T ss_pred EEEEEEEEEeeCCCCC----CCCCCCCcCeEEEEEEccCCCCcEEEEEEEEecccCCceEEEEEEEEEEcchhceEEEEE
Confidence 5799999999999742 2344567899999999998888889999998776 7999999999999888899999999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||+|..+++++||++++||+++++||||+||+|.+|+++.+++|||||++
T Consensus 80 ~D~d~~~~d~~iG~~~i~l~~l~~g~~~~~L~~~~g~~~~~~~L~v~i~~ 129 (131)
T d1qasa2 80 EDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISI 129 (131)
T ss_dssp EECCTTTCCEEEEEEEEEGGGBCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEecCCCCCcEEEEEEEEEeccCCCCEEEECCCCCcCCCCCCEEEEEEEE
Confidence 99998888999999999999999999999999999999999999999987
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.73 E-value=1.8e-18 Score=145.18 Aligned_cols=91 Identities=21% Similarity=0.312 Sum_probs=80.4
Q ss_pred cCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCC
Q 008582 19 AASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (561)
Q Consensus 19 ~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~ 97 (561)
..+++|+||..||.+|+++ +.||+++|.+||+++|++..++.+.|++||++|++... ...++.||++||++||+|++
T Consensus 2 ~~l~~R~ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~--~~~~~~ls~~gF~~fL~S~~ 79 (94)
T d1qasa1 2 KMLTQRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSET--AKAQRQMTKDGFLMYLLSAD 79 (94)
T ss_dssp TTTSCCHHHHHHHHHHHTTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHH--HHHTTBCCHHHHHHHHHSST
T ss_pred CCCCccHHHHHHHHHHhCCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHh--hhhcCCcCHHHHHHHHcCcc
Confidence 4578999999999999988 89999999999999999988999999999999985332 12356899999999999999
Q ss_pred CCCCCC-CCCccCCC
Q 008582 98 NPPLSP-TPVVHHDM 111 (561)
Q Consensus 98 n~~~~~-~~~~~~dm 111 (561)
|++++| |..|||||
T Consensus 80 N~i~~p~~~~V~qDM 94 (94)
T d1qasa1 80 GNAFSLAHRRVYQDM 94 (94)
T ss_dssp TBSBCGGGGSCCSCC
T ss_pred cCCCCccccccCCCC
Confidence 999976 56899999
|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=8.5e-17 Score=141.53 Aligned_cols=118 Identities=21% Similarity=0.350 Sum_probs=97.1
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|.+|+. .+..+.+||||+|.+.+ .+++|+++.++.||.|||+|.|.+..+. ..|.|.||
T Consensus 6 G~L~V~v~~A~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~v~~~~-~~L~i~V~ 73 (126)
T d2ep6a1 6 GILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVF 73 (126)
T ss_dssp EEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEEEE
T ss_pred EEEEEEEEEeECCCC------CCCCCCcCeEEEEEcCC-----eEEEEEeeCCceeEEEEEEEEEEEeccC-ceeEEEEE
Confidence 689999999999963 23456789999999853 5789999999999999999999987654 57999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCce-EEEccCCCCCcccCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~GyR-~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|++..+++++||++.++|..+..|.. +.+|....++....+.|.++++++
T Consensus 74 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~l~~~~~~~~~~G~i~l~~~~i 124 (126)
T d2ep6a1 74 DEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 124 (126)
T ss_dssp EEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EccCCcCcceEEEEEEEHHHCCCCCceEEEccccCCCCceeEEEEEEEEEE
Confidence 99988888999999999999998874 446665555544446899998874
|
| >d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from cytosolic phospholipase A2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.3e-15 Score=133.57 Aligned_cols=118 Identities=24% Similarity=0.340 Sum_probs=92.0
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
.+|+|+|++|++|+.. ...+..+.+||||++.+.+. ...++||+++.++.||.|||+|.|.+..+....|+|.||
T Consensus 3 ~~l~V~v~~a~~L~~~---~~~d~~~~~Dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~f~i~~~~~~~L~v~V~ 77 (126)
T d1rlwa_ 3 HKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTT--PDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCSC---HHHHHHCCCCEEEEEECTTS--TTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEEEEccCCCCc---cccccCCCCCcEEEEEECCc--ccceeEeeecCCCccceeceeeeecccCcccCcEEEEEE
Confidence 5799999999999632 11234567899999998542 235678999999999999999999998777778999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCce---EEEccCCCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~GyR---~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|++.. ++++||++.++|+.|..|.+ +.+|...+ ...|.+++++
T Consensus 78 d~d~~-~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~g~i~~~l~~ 123 (126)
T d1rlwa_ 78 DANYV-MDETLGTATFTVSSMKVGEKKEVPFIFNQVT-----EMVLEMSLEV 123 (126)
T ss_dssp ECCSS-CCEEEEEEEEEGGGSCTTCEEEEEEEETTTE-----EEEEEEEEEC
T ss_pred ECCCC-CCCeEEEEEEEHHHccCCCeEEEEEEccCCC-----eEEEEEEEEE
Confidence 99865 58999999999999988864 46775432 2455555554
|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.59 E-value=3.3e-15 Score=132.21 Aligned_cols=106 Identities=26% Similarity=0.432 Sum_probs=88.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~V 510 (561)
..|+|+|+.|.+|+.. +..+.+||||+|.+.+.+....++||+++.++.||+|||+|.|.+..++. ..|.|.|
T Consensus 15 ~~L~V~V~~a~~L~~~------d~~g~~DpYv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 88 (132)
T d1a25a_ 15 EVLIVVVRDAKNLVPM------DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI 88 (132)
T ss_dssp SEEEEEEEEEESCCCC------STTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred CEEEEEEEeeeCCCCC------CCCCCcCeEEEEEEccCCCCccccEEeeecCCCCCccceEEEEEeEccccCCEEeEEE
Confidence 5799999999999742 34466899999999766555668899999999999999999999875543 5799999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCC-ce-EEEccC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQG-IR-AVPLHD 543 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~G-yR-~ipL~d 543 (561)
||+|..+++++||.+.++|..+..+ .. |.+|.+
T Consensus 89 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~W~~L~~ 123 (132)
T d1a25a_ 89 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLS 123 (132)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred EecCCCCCCcEeEEEEEeHHHcCCCCCCeEEECCC
Confidence 9999888899999999999998654 33 568876
|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.56 E-value=1.8e-15 Score=135.06 Aligned_cols=115 Identities=18% Similarity=0.162 Sum_probs=89.1
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|...+|.|+|+.|++|+.. +..+.+||||+|.+...+....++||++++++.||.|||+|.|.+...++ ..|
T Consensus 12 ~~~~~L~V~v~~a~~L~~~------~~~~~~dpyvkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l 85 (138)
T d1w15a_ 12 STTNTLTVVVLKARHLPKS------DVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISV 85 (138)
T ss_dssp TTTTEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEE
T ss_pred CCCCEEEEEEEEeECCCCC------CCCCCcCEEEEEEEeCCcccCccccceeECCCCCCeECcEEEEEecHHHhCccEE
Confidence 3456899999999999642 33456899999999754444456789999999999999999999865544 469
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
.|.|||.|..+++++||++.+++.+...|.+|+ .|.+..++++
T Consensus 86 ~i~v~d~~~~~~~~~iG~~~i~l~~~~~~~~hW~~ll~~~~k~i 129 (138)
T d1w15a_ 86 EFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQI 129 (138)
T ss_dssp EEEEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCE
T ss_pred EEEEEeCCCCCCCCEEEEEEEcchhCCchHHHHHHHHhCCCCee
Confidence 999999998888999999999999887777654 5555555554
|
| >d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: E3 ubiquitin-protein ligase Itchy species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.3e-14 Score=128.78 Aligned_cols=117 Identities=19% Similarity=0.223 Sum_probs=91.2
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
+.+|.|+|++|.+++.. +..+.+||||+|.+.+ .++||++++++.||.|||.|.|.+.. ...|.|.|
T Consensus 5 ~~~L~v~v~~A~~~~~~------~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~~~~--~~~l~~~V 71 (133)
T d2nq3a1 5 KSQLQITVISAKLKENK------KNWFGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRV 71 (133)
T ss_dssp CEEEEEEEEEEEECCCC--------CCCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEE
T ss_pred ceEEEEEEEEeECCCcC------CCCCCcCeEEEEEECC-----eEEeeEEEEecccEEEcceEEEEEEe--cceeEEEE
Confidence 46899999999987532 2345679999999864 46799999999999999999999853 35799999
Q ss_pred EecCCCCCCcceEEEEEeCcccC---CC-----ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELK---QG-----IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~---~G-----yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||+|..++|++||++.++|..+. .| ...+.|....+.....+.|.|.++.
T Consensus 72 ~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~~~l~l~~~~~~~~~~G~L~v~l~~ 129 (133)
T d2nq3a1 72 WSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 129 (133)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred EEccCCCCCceEEEEEEEHHHhhhhcCCceeeEEEEEecCCCCCCceEEEEEEEEEee
Confidence 99999889999999999998762 22 2344556666666666788888763
|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2b-domain of rabphilin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=1e-14 Score=129.48 Aligned_cols=115 Identities=20% Similarity=0.251 Sum_probs=90.8
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|..+.|.|+|+.|++|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|
T Consensus 12 ~~~~~L~V~v~~a~nL~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l 85 (137)
T d2cm5a1 12 TQQGGLIVGIIRCVHLAAM------DANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSL 85 (137)
T ss_dssp TTTTEEEEEEEEEESCCCC------STTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEE
T ss_pred CCCCEEEEEEEEEECCCCC------CCCCCcCeEEEEEEEcCCccceeecCEeEcCCCCCccceEEEEEeEHHHccccEE
Confidence 3457899999999999742 33456899999999754444567899999999999999999999876554 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
.|.|||.+..+++++||++.+++..+..+..|+ +|.+..++++
T Consensus 86 ~v~v~~~~~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~v 129 (137)
T d2cm5a1 86 DISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKI 129 (137)
T ss_dssp EEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCE
T ss_pred EEEeeeCCCCCCCCEEEEEEeCccccCcchhhhhhHhhCCCCee
Confidence 999999998888999999999999887665543 6766666654
|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=7.8e-14 Score=125.00 Aligned_cols=105 Identities=22% Similarity=0.244 Sum_probs=84.9
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~Lr 507 (561)
....|.|+|+.|++|+. .+..+.+||||+|.+.+. ...+.+|++++++.||.|||+|.|.+..++ ...|+
T Consensus 32 ~~~~L~V~V~~a~~L~~------~~~~g~~dpyV~v~l~~~--~~~~~kT~~~~~t~~P~wne~f~f~i~~~~l~~~~L~ 103 (143)
T d1rsya_ 32 QNNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLPD--KKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLV 103 (143)
T ss_dssp TTTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETT--CCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEE
T ss_pred CCCEEEEEEEEccCCCC------CCCCCCCCeEEEEEEcCC--CCeeEEEEEeccccCcceeeeeEEEEEeeccCCceEE
Confidence 34689999999999963 233456899999999743 345678999999999999999999986543 35799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~ 542 (561)
|.|||++..+++++||++.++|..+..|. .|.+|.
T Consensus 104 i~V~d~d~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L~ 141 (143)
T d1rsya_ 104 MAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp EEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred EEEEEcCCCCCCcEEEEEEEEchhccCCCCCccEEeCC
Confidence 99999998888999999999999997665 344654
|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain protein At1g63220 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.50 E-value=2.6e-14 Score=126.93 Aligned_cols=114 Identities=23% Similarity=0.351 Sum_probs=87.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
+.|+|+|++|++|+. .+..+.+||||++.+.+ .+++|+++.+ +.||+|||+|.|.+..++ ..|+|.|
T Consensus 10 G~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~t~~~~~~~~nP~Wne~f~f~v~~~~-~~L~v~V 77 (136)
T d1wfja_ 10 GTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSEGT-TELKAKI 77 (136)
T ss_dssp EEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEESSC-CEEEEEE
T ss_pred EEEEEEEEEeeCCCC------CCCCCCCCccEEEEEee-----eeEEEEEEecCCCcEEEeeEEEEEEcCcc-ceEEEEE
Confidence 689999999999963 24557789999998753 4667888775 689999999999987654 3489999
Q ss_pred EecCCCCCCcceEEEEEeCcccC-CCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELK-QGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~-~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||+|..++|++||++.+||..+. .|. .+.+|. ..++. .+.|.+.+.|
T Consensus 78 ~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~l~-~~~~~--~G~i~l~l~~ 128 (136)
T d1wfja_ 78 FDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEEY--KGEIWVALSF 128 (136)
T ss_dssp CCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTEE--EEEEEEEEEE
T ss_pred EEecCCCCCCEEEEEEEEhHHhcccCCcCcEEEEec-CCCcc--CEEEEEEEEE
Confidence 99998888999999999999863 333 344553 23333 2478887776
|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=4e-14 Score=129.04 Aligned_cols=101 Identities=20% Similarity=0.265 Sum_probs=82.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|..++|.|+|+.|++|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+++ ..|
T Consensus 22 ~~~~~L~V~V~~a~~L~~~------~~~~~~dpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~F~v~~~~l~~~~l 95 (157)
T d1uowa_ 22 PTAGKLTVVILEAKNLKKM------DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQV 95 (157)
T ss_dssp TTTTEEEEEEEEEESCCCC------STTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEE
T ss_pred CCCCEEEEEEEEEEEcccc------cCCCCCCeeEEEEEecCCccccceecccccCCCCcccCCeEEEEecHHHcCccEE
Confidence 4557899999999999632 33466899999998753333345689999999999999999999876654 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
+|.|||.+..+++++||++.|++.+...+
T Consensus 96 ~i~v~d~~~~~~~~~iG~~~i~l~~~~~~ 124 (157)
T d1uowa_ 96 VVTVLDYDKIGKNDAIGKVFVGYNSTGAE 124 (157)
T ss_dssp EEEEEECCSSSCCCEEEEEEEETTCCHHH
T ss_pred EEEEcccCCCCCCceeEEEEEecccCChh
Confidence 99999999888899999999999876444
|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Piccolo species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.45 E-value=5.3e-14 Score=125.55 Aligned_cols=108 Identities=19% Similarity=0.276 Sum_probs=84.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC---------ceeeecccCCCCCCCccccEEEEeee-cC
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD---------TVMKKTKTLEDNWIPSWNEEFEFPLS-VP 501 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d---------~~k~kTkvi~nn~nP~WNE~f~F~v~-~p 501 (561)
+.|.|+|+.|++|+.. +..+.+||||+|.+...... ..++||++++++.||.|||+|.|.+. ..
T Consensus 18 ~~L~V~V~~A~~L~~~------d~~g~~DpyV~v~l~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 91 (142)
T d1rh8a_ 18 GNLIIHILQARNLVPR------DNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME 91 (142)
T ss_dssp TEEEEEEEEEESCCCC------SSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred CEEEEEEEEeECCCCc------CCCCCCCcCEEEEEecCcccccccccCCCceeeeccCCcCCCCceeEEEEEEeeeccc
Confidence 4799999999999742 34567899999998543222 12468999999999999999999843 22
Q ss_pred --CceEEEEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCC
Q 008582 502 --ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 545 (561)
Q Consensus 502 --ela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~ 545 (561)
....|+|.|||+|..+++++||++.++|..+..+- .|.+|.+.+
T Consensus 92 ~~~~~~L~i~V~d~d~~~~~~~lG~~~i~L~~l~~~~~~~~W~~L~~~~ 140 (142)
T d1rh8a_ 92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred ccCCCEEEEEEEEecCCCCCeeeEEEEEEhHHcCCCCCceEEEECcCcC
Confidence 23579999999998888999999999999986553 577888764
|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin XIII species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=4.2e-13 Score=119.53 Aligned_cols=105 Identities=20% Similarity=0.191 Sum_probs=85.2
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 508 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf 508 (561)
...|.|+|+.|.+|+. .+.+||||+|.+.+. ....+++|++++++.||.|||+|.|.+...++ ..|+|
T Consensus 25 ~~~L~V~v~~a~~L~~---------~g~~dpyVkv~l~~~-~~~~~~kT~v~~~~~~P~wne~f~f~v~~~~l~~~~L~~ 94 (138)
T d1wfma_ 25 KAELFVTRLEAVTSNH---------DGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTL 94 (138)
T ss_dssp TTEEEEEEEEEECCCC---------SSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEE
T ss_pred CCEEEEEEEEcCCCCC---------CCCcCcEEEEEECCC-CCccceeeeEECCCCCceEeeeEEEEeeehhccceEEEE
Confidence 4689999999998842 234699999999753 23446789999999999999999999876554 67999
Q ss_pred EEEecCCCCCCcceEEEEEeCcccCCC--c-eEEEccCCC
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELKQG--I-RAVPLHDRK 545 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~~G--y-R~ipL~d~~ 545 (561)
.|||.+..+++++||++.|+|..+..+ . .|.+|....
T Consensus 95 ~V~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~W~~L~~~~ 134 (138)
T d1wfma_ 95 TLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp EEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred EEeeecccccceeeeEEEEEhHHccCCCCceEeEeCCCCC
Confidence 999999888899999999999988644 3 567887644
|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.45 E-value=1.9e-13 Score=120.43 Aligned_cols=107 Identities=21% Similarity=0.223 Sum_probs=82.7
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
+..+.|.|+|+.|++|+.. +..+.+||||+|.+.+ ....++||+++.++.||+|||+|.|.+..+++ ..|
T Consensus 15 ~~~~~L~V~V~~a~~L~~~------~~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~~~~~~L 86 (130)
T d1dqva1 15 YGSDQLVVRILQALDLPAK------DSNGFSDPYVKIYLLP--DRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKL 86 (130)
T ss_dssp SSSCEEEEEEEEEECCCCC------STTSCCCEEEEEECTT--STTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCC
T ss_pred CCCCEEEEEEEeeeCCccc------cCCCCcceEEEEEEcc--CCCceEeceeEcCCCCeeeeeEEEEEEchHHcCCCeE
Confidence 3457899999999999642 3346689999999853 33457899999999999999999999865543 468
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcc-cCCC----ceEEEccC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSE-LKQG----IRAVPLHD 543 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~-L~~G----yR~ipL~d 543 (561)
+|.|||++..+++++||++.|++.. +... -.|.+|.+
T Consensus 87 ~v~V~d~~~~~~d~~iG~~~i~~~~~l~~~~~~~~~W~~L~~ 128 (130)
T d1dqva1 87 HFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILE 128 (130)
T ss_dssp EEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBC
T ss_pred EEEEEEcCCCCCCceEEEEEECchhhhhcCCCCCcEEEeccc
Confidence 9999999988889999999998643 3221 13567765
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Regulating synaptic membrane exocytosis protein, rim2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=4.7e-13 Score=116.93 Aligned_cols=98 Identities=19% Similarity=0.326 Sum_probs=75.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pel--a~L 506 (561)
...+|.|+|+.|.+|+.. +..+.+||||+|.+........++||++++++.||.|||+|.|. +...++ ..|
T Consensus 12 ~~~~L~V~V~~a~~L~~~------~~~~~~dpyVkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~f~~~~~~~l~~~~L 85 (125)
T d2bwqa1 12 VGHQLIVTILGAKDLPSR------EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERML 85 (125)
T ss_dssp TTTEEEEEEEEEESCCCC------TTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEE
T ss_pred CCCEEEEEEEEeECCCCc------CCCCCCCEEEEEEEeCCCCCccccccCEEcCCCCCEEccEEEEeeeChhhcCCCEE
Confidence 456899999999999742 33466899999999754445567899999999999999999997 444433 479
Q ss_pred EEEEEecCCC--CCCcceEEEEEeCcccC
Q 008582 507 RIEVHEYDMS--EKDDFGGQTCLPVSELK 533 (561)
Q Consensus 507 rf~V~D~d~~--~~dd~iGq~~lpL~~L~ 533 (561)
.|.|||.+.. .++++||++.+||+.+.
T Consensus 86 ~i~v~d~~~~~~~~~~~iG~~~i~l~~~~ 114 (125)
T d2bwqa1 86 EITLWDQARVREEESEFLGEILIELETAL 114 (125)
T ss_dssp EEEEEEC-------CEEEEEEEEEGGGCC
T ss_pred EEEEEECCCCCCCCCeeEEEEEEEchhcC
Confidence 9999998854 34569999999998875
|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C epsilon species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.41 E-value=1.2e-12 Score=116.40 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=87.8
Q ss_pred CceEEEEEEEecCCCCCC-----CCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceE
Q 008582 431 KKTLKVTVYMGEGWYYDF-----PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL 505 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~-----~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~ 505 (561)
.+.|+|+|+.|++|+... ........+.+||||+|.+.+ ....+|+++.++.||.|||+|.|.+..+ ..
T Consensus 5 ~G~L~v~I~~A~~L~~~~~~~~~~~~~~~~~~~~DPYv~v~l~~----~~~~~T~~~~~t~~P~Wne~f~f~v~~~--~~ 78 (136)
T d1gmia_ 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG--RK 78 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred EEEEEEEEEEeECCCcccccccccccccCCCCCcCcEEEEEeCC----CcCcEeeEEcCCCCccCccEEEEEEecC--Cc
Confidence 368999999999996420 000112235679999999943 3456899999999999999999998643 56
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccCCC-----ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G-----yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.|.|||.+..++|++||.+.++|+.+..+ .+|++|. + .+++.++++|
T Consensus 79 l~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~w~~L~-p------~G~v~l~v~~ 131 (136)
T d1gmia_ 79 IELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE-P------EGKVYVIIDL 131 (136)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB-S------SCEEEEEEEE
T ss_pred eEEEEEEecCCCCceeEEEEEEEHHHhhhcCCcceeEEEeCC-C------CcEEEEEEEE
Confidence 999999999888899999999999987422 2567875 2 3467777776
|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=1e-12 Score=116.91 Aligned_cols=97 Identities=21% Similarity=0.358 Sum_probs=77.4
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pel--a~L 506 (561)
....|.|+|+.|++|+.. + .....+||||+|.+.+ ....++||++++++.||.|||+|.|. +...++ ..|
T Consensus 20 ~~~~L~V~V~~a~~L~~~----d-~~~~~~dpyV~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~L 92 (138)
T d1ugka_ 20 ERKAFVVNIKEARGLPAM----D-EQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL 92 (138)
T ss_dssp GGTEEEEEEEEEESCCCC----B-TTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred CCCEEEEEEEEecCCCCC----C-CCCCccceEEEEEEcC--CCCEeEeCeeEeCCCCCceeeEEEEeeeCHHHcccceE
Confidence 346899999999999742 0 1123469999999964 33457789999999999999999996 443333 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
+|.|||.|..+++++||++.++|+.+.
T Consensus 93 ~~~V~d~d~~~~~~~iG~~~i~L~~~~ 119 (138)
T d1ugka_ 93 HFTILSFDRFSRDDIIGEVLIPLSGIE 119 (138)
T ss_dssp EEEEEEECSSCCCCCCEEEEEECTTCC
T ss_pred EEEEEECCCCCCCcEEEEEEEEccccc
Confidence 999999998888999999999999874
|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.34 E-value=2.6e-13 Score=121.76 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=89.0
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|..+.|.|+|+.|++|+.. +..+.+||||+|.+.+......++||++++++.||.|||+|.|.+...++ ..|
T Consensus 17 ~~~~~L~V~V~~a~nL~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l 90 (145)
T d1dqva2 17 PTAGLLTVTIIKASNLKAM------DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGL 90 (145)
T ss_dssp TTTTEEEEEEEEEESCCCC------SSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCC
T ss_pred CCCCEEEEEEEEEeCCCCc------CCCCCcCceEEEEEccCCccceeecCEEEeCCCCceecceEEEEEehhhcCCCEE
Confidence 4557899999999999642 33456799999999765555557899999999999999999998764333 568
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccC-CCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~-~GyR~i-pL~d~~G~~~ 549 (561)
.|.|+|.+..+++++||++.|++..+. .|+.|+ +|.+..++++
T Consensus 91 ~v~v~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~l~~~p~~~i 135 (145)
T d1dqva2 91 SIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPV 135 (145)
T ss_dssp CCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCS
T ss_pred EEEEEecCCCCCCcEEEEEEECchHcCchhhHHHHHHHhCCCCee
Confidence 999999998888999999999998874 345443 5555545443
|
| >d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Unc-13 homolog A species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.34 E-value=3.4e-12 Score=112.35 Aligned_cols=113 Identities=21% Similarity=0.284 Sum_probs=84.1
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
..|.|+|..|+++... +..||||+|.+.+ .+.+|+++++ .||.|||+|.|.+..++. .|.|.||
T Consensus 2 ~~L~V~v~~a~~l~~~---------~~~dpYv~l~~~~-----~k~~T~~~k~-~nP~Wne~f~f~v~~~~~-~L~v~V~ 65 (128)
T d2cjta1 2 SLLCVGVKKAKFDGAQ---------EKFNTYVTLKVQN-----VKSTTIAVRG-SQPSWEQDFMFEINRLDL-GLTVEVW 65 (128)
T ss_dssp EEEEEEEEEEECSSCG---------GGCEEEEEEEETT-----EEEECCCEES-SSCEEEEEEEEEECCCSS-EEEEEEE
T ss_pred eEEEEEEEEEECCCCC---------CCcCeEEEEEeCC-----EEEEEEEecC-CCCeEEEEEEEeeccccc-eEEEEEE
Confidence 3689999999988531 2359999999953 5778888764 599999999999987764 5789999
Q ss_pred ecCCCCCCcceEEEEEeCcccCC----Cc-eEEEccC----CCCCcc-----cCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQ----GI-RAVPLHD----RKGERY-----KSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~----Gy-R~ipL~d----~~G~~~-----~~atLlv~~~f~ 561 (561)
|++.. +|++||++.|||+.+.. |. .|.+|.. ..|+.. .+.+|+++..|.
T Consensus 66 d~~~~-~d~~lG~~~I~L~~l~~~~~~~~~~W~~L~~~~~~~~gei~gt~~~~~~~~ll~~~~~ 128 (128)
T d2cjta1 66 NKGLI-WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 128 (128)
T ss_dssp ECCSS-CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred eCCCc-CCcceEEEEEEehhhccCCCCCCCeeEECCccccCCCCEEEeeecCCCcEEEEEEEcC
Confidence 99875 59999999999999852 23 5778854 334433 256888887763
|
| >d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Bacillus cereus [TaxId: 1396]
Probab=99.19 E-value=2.9e-12 Score=127.72 Aligned_cols=137 Identities=10% Similarity=0.105 Sum_probs=98.3
Q ss_pred CCCccceeeccccccc--ccCCCC---CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHH
Q 008582 112 TAPVSHYFIYTGHNSY--LTGNQL---NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTY--L~g~Ql---~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
+.||+++.|-.|||++ -+++.+ .+.+-...+...|..|+|+++|||+...+ +++.++||.. ...++|.||++.
T Consensus 20 ~~~l~~l~ipGtHnS~t~~~~~~~~~~~s~~Q~~~i~~QL~~GvR~fDlrv~~~~~-~~~~~~Hg~~-~~~~~l~~vL~~ 97 (296)
T d2ptda_ 20 SIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD-NTIVLHHGPL-YLYVTLHEFINE 97 (296)
T ss_dssp TSBTTTSCEEEETTGGGTTCCCHHHHHHHCCCSSCHHHHHTTTCCEEEEEEEECTT-SCEEEEETTE-EEEEEHHHHHHH
T ss_pred CceeeheEeccccccccccCCCCcccccccCccchHHHHHHhCCcEEEEeeeecCC-CceEEEeCCc-cCCCcHHHHHHH
Confidence 5699999999999974 444322 12233456889999999999999986543 5788999864 345789999999
Q ss_pred HhhhccccCCCceEEEeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecC
Q 008582 187 IKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTK 253 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~--~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 253 (561)
|+++......-.|||+|+.++.. +....+.+.+.+.+++.... -.....|++.+++||+++...
T Consensus 98 i~~Fl~~np~EvVil~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~ptL~e~~~k~~~l~~ 163 (296)
T d2ptda_ 98 AKQFLKDNPSETIIMSLKKEYEDMKGAEDSFSSTFEKKYFVDPIF---LKTEGNIKLGDARGKIVLLKR 163 (296)
T ss_dssp HHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTB---CCCCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHhCCCceEEEEEEeccCCccchHHHHHHHHHHHhccCccc---ccCCCCCChHHHccceeEEEE
Confidence 99999999899999999988742 22222344444444432221 123578999999999877643
|
| >d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C delta species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.18 E-value=7.5e-11 Score=102.79 Aligned_cols=93 Identities=15% Similarity=0.177 Sum_probs=72.5
Q ss_pred CCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccC--
Q 008582 456 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK-- 533 (561)
Q Consensus 456 ~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~-- 533 (561)
.+.+||||+|.+.+......+++|++++++.||+|||+|.|.+.. ...|.|.|||+| ++++|...+++..|.
T Consensus 21 ~~~~dPY~~v~l~~~~~~~~~~~t~~~kkT~nP~WnE~F~~~v~~--~~~l~i~V~d~d----d~~~g~~~i~l~~l~~~ 94 (123)
T d1bdya_ 21 DDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA----EDPMSEVTVGVSVLAER 94 (123)
T ss_dssp CCSCCCEEEEEEEEECCGGGTTBEEECSCCBCCCTTCEEEEECCT--TCEEEEEEEEET----TEEEEEEEEEHHHHHHH
T ss_pred CCCCCCEEEEEEcCccccccceEEEEeCCCCCcccceEEEEEEcc--ccEEEEEEEEcc----ccccCccEEehhheeec
Confidence 466899999999765444445678899999999999999999864 356899999976 789999999998773
Q ss_pred ---CCc---eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 534 ---QGI---RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 534 ---~Gy---R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.|- -+++|. + .+.|.+.++|+
T Consensus 95 ~~~~~~~~~~W~~L~-~------~Gkl~l~v~~f 121 (123)
T d1bdya_ 95 CKKNNGKAEFWLDLQ-P------QAKVLMCVQYF 121 (123)
T ss_dssp HHTTTTEEEEEEECB-S------SCEEEEEEEEE
T ss_pred cccCCCcccEEEeCC-C------CEEEEEEEEEe
Confidence 333 466764 2 34788888885
|
| >d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Listeria monocytogenes [TaxId: 1639]
Probab=98.86 E-value=1.5e-09 Score=106.82 Aligned_cols=136 Identities=14% Similarity=0.286 Sum_probs=105.5
Q ss_pred CCCccceeecccccccccCCCCCCC-------CChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHH
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLNSD-------CSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCL 184 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~-------Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi 184 (561)
+.||+|..|-.|||++-......+. .-...+..-|..|+|.++|++++ +..++||.... ..+|.+|+
T Consensus 13 ~~~l~~l~ipGtHnS~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GvR~~dlr~~~-----~~~~~Hg~~~~-~~~~~~~L 86 (274)
T d2plca_ 13 TTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKD-----NLNIYHGPIFL-NASLSGVL 86 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECT-----TSEEEETTEEE-EEEHHHHH
T ss_pred CcEeeheecccccccccccCCCCCcccccccccccccHHHHHHhCCeEEEeeeCC-----ceEEEEEeecc-ceeHHHHH
Confidence 4699999999999996322111100 00113667899999999999974 47899997664 47899999
Q ss_pred HHHhhhccccCCCceEEEecc-CCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecC
Q 008582 185 RSIKEYAFVASEYPVVITLED-HLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTK 253 (561)
Q Consensus 185 ~aI~~~AF~~S~yPvIlSlE~-Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K 253 (561)
+.|+++--....-.|||.++. +.+.+....+++.+.+.||++++.++. .....+|++.+++|||+|-..
T Consensus 87 ~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ptl~e~~gk~vi~~~ 157 (274)
T d2plca_ 87 ETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSE 157 (274)
T ss_dssp HHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEEecCCCchHHHHHHHHHHHHhhcccccCccccccCCCCChHHhCCCEEEEec
Confidence 999998877777899999965 677777788888999999999998653 334679999999999988653
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=4.2e-10 Score=103.25 Aligned_cols=81 Identities=25% Similarity=0.368 Sum_probs=55.8
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHH
Q 008582 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFF 90 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~ 90 (561)
+++|+||..+|..|..+ +.||.++|..||+++|++.. ++.+.|.++|.+|++... ...++.||++||+
T Consensus 74 l~~r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~ls~d~F~ 151 (170)
T d2zkmx1 74 LCPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGI--NAQRGQLSPEGMV 151 (170)
T ss_dssp HSCCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC----------CCHHHHH
T ss_pred cCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccc--cccCCeECHHHHH
Confidence 46789999999999865 78999999999999999853 467889999999984321 1234679999999
Q ss_pred HhhcCCCCCCCCC
Q 008582 91 KYLFGDINPPLSP 103 (561)
Q Consensus 91 ~~L~s~~n~~~~~ 103 (561)
+||+|++|+++.|
T Consensus 152 ~fL~S~en~i~~~ 164 (170)
T d2zkmx1 152 WFLCGPENSVLAQ 164 (170)
T ss_dssp HHHHSTTSCSBCG
T ss_pred HHHcCccCCCCCh
Confidence 9999999999975
|
| >d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Putative glycerophosphodiester phosphodiesterase TTHB141 species: Thermus thermophilus [TaxId: 274]
Probab=96.32 E-value=0.0038 Score=56.74 Aligned_cols=42 Identities=24% Similarity=0.378 Sum_probs=35.6
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
..-+-|.++|..|+..||+.||+|+|=-.| +.|||.|..|+.
T Consensus 12 ~~pENT~~a~~~a~~~G~~~iE~DV~~TkD-g~~vv~HD~~~~ 53 (217)
T d1vd6a1 12 KAKENTLESFRLALEAGLDGVELDVWPTRD-GVFAVRHDPDTP 53 (217)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSCSEET
T ss_pred CCCchhHHHHHHHHHcCCCEEEEEEEEecC-CCEEEecccccC
Confidence 345889999999999999999999995444 479999998765
|
| >d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Glycerophosphodiester phosphodiesterase UgpQ species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.88 E-value=0.003 Score=59.06 Aligned_cols=39 Identities=28% Similarity=0.354 Sum_probs=34.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+.|.++|..|+..||++||+|+|=-.| +.|||+|..++
T Consensus 15 pENT~~a~~~A~~~G~~~iE~Dv~~TkD-g~~Vv~HD~~l 53 (240)
T d1zcca1 15 PENTFAAADLALQQGADYIELDVRESAD-GVLYVIHDETL 53 (240)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBT
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEEecC-CCEEEeccccc
Confidence 4789999999999999999999996444 47999998875
|
| >d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Hypothetical protein TM1621 species: Thermotoga maritima [TaxId: 2336]
Probab=94.83 E-value=0.012 Score=53.91 Aligned_cols=41 Identities=20% Similarity=0.282 Sum_probs=35.2
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
..-+-|.++|..|+..||+.||+|++--.| +.|||.|-.|+
T Consensus 16 ~~pENT~~af~~a~~~g~~~iE~Dv~~T~D-g~~Vv~HD~~l 56 (226)
T d1o1za_ 16 KYLENTLEAFMKAIEAGANGVELDVRLSKD-GKVVVSHDEDL 56 (226)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEE
T ss_pred CCCcchHHHHHHHHHcCCCEEEEEEEEccC-CCEEeecccee
Confidence 345789999999999999999999996544 47999999876
|
| >d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Glycerophosphodiester phosphodiesterase GlpQ species: Escherichia coli [TaxId: 562]
Probab=94.56 E-value=0.013 Score=56.38 Aligned_cols=40 Identities=23% Similarity=0.260 Sum_probs=34.8
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+.|.++|..|+..||-+||+|||=-.| +.|||+|-.+|.
T Consensus 16 PENTl~af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 55 (328)
T d1ydya1 16 PEHTLPAKAMAYAQGADYLEQDLVMTKD-DNLVVLHDHYLD 55 (328)
T ss_dssp STTCHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBCT
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeEccC-CcEEEECCchhh
Confidence 4789999999999999999999995444 469999999874
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.79 E-value=0.022 Score=43.76 Aligned_cols=67 Identities=13% Similarity=0.274 Sum_probs=48.5
Q ss_pred CCchHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~---~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
....+|..+|++|+. + ++|+.++|+..|+..-.....+.+.+..+|...- .-+.+.++++.|..+|.
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D------~d~dG~Idf~EF~~l~~ 74 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELD------KNGDGEVSFEEFQVLVK 74 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTC------CCSSSSEEHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHc------CCCCCcCcHHHHHHHHH
Confidence 346799999999973 2 6899999999999864322234455677777643 12346799999998874
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=92.74 E-value=0.095 Score=40.16 Aligned_cols=66 Identities=14% Similarity=0.423 Sum_probs=52.6
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
.+..+|..+|..|=.+ ++|+.++|+..|+.. +. ..+.+++..+|..+... +.+.++++.|.++|..
T Consensus 12 ~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~ev~~~~~~~D~d------~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GE-TITEDDIEELMKDGDKN------NDGRIDYDEFLEFMKG 79 (81)
T ss_dssp CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTS-SS-CCCHHHHHHHHHHHCSS------SSSSEEHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhc-CC-CCCHHHHHHHHHHHCCC------CCCcEeHHHHHHHHHh
Confidence 4567899999999643 899999999999863 44 47899999999987521 3467999999999863
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=92.73 E-value=0.088 Score=39.77 Aligned_cols=65 Identities=17% Similarity=0.402 Sum_probs=52.5
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.++.+|..+|..|=.+ +.|+.++|+..|+.... ..+.+++..++..+.. -+.+.|+++.|.++|.
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~~~~e~~~~~~~~D~------d~~G~I~~~EF~~~m~ 72 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE--NLTEEELQEMIAEADR------NDDNEIDEDEFIRIMK 72 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTC--CCCHHHHHHHHHHHCC------SSSSEECHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCC--CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHH
Confidence 4567899999999644 89999999999997654 3688999999987652 1346799999999986
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.18 E-value=0.086 Score=39.81 Aligned_cols=67 Identities=10% Similarity=0.290 Sum_probs=48.4
Q ss_pred CCchHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~---~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.++.||..+|+.|.. + ++|+.++|+..|+..-.....+..++.+++..+.. -+.+.++++.|..+|.
T Consensus 2 ~s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~------d~dG~I~f~EF~~~m~ 72 (76)
T d1qx2a_ 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDK------NGDGEVSFEEFLVMMK 72 (76)
T ss_dssp CCHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCT------TCSSEECHHHHHHHHH
T ss_pred cCHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhc------CCCCcCcHHHHHHHHH
Confidence 467899999999953 3 78999999999987532211233457788887652 1346799999999874
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=92.13 E-value=0.13 Score=40.97 Aligned_cols=63 Identities=11% Similarity=0.217 Sum_probs=47.2
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~---~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|++|+. + ++|+.++|+..|+.+=.....+.+.+.++|...-. -+.+.++|+.|..+|.
T Consensus 15 ~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~------d~DG~IdF~EF~~l~~ 81 (98)
T d1yuta1 15 TVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDV------NQDSELKFNEYWRLIG 81 (98)
T ss_dssp HHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCT------TCCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcC------CCCCcCCHHHHHHHHH
Confidence 57788999963 2 69999999999997643323455668888887642 2356799999999875
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=91.83 E-value=0.18 Score=42.11 Aligned_cols=64 Identities=14% Similarity=0.335 Sum_probs=50.4
Q ss_pred chHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 24 PDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 24 r~ei~~if~~~~~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
..++..+|+.|-. + +.|+.++|+.+|.... . ..+.+++.+|+..+... +.+.+++++|.++|+|
T Consensus 81 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~i~~~~D~d------~dG~i~~~eF~~~l~s 146 (146)
T d1exra_ 81 EEELIEAFKVFDRDGNGLISAAELRHVMTNLG-E-KLTDDEVDEMIREADID------GDGHINYEEFVRMMVS 146 (146)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCSS------SSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh-h-cCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHhcC
Confidence 3467889999843 3 8999999999998643 3 47889999999987521 2467999999999975
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=91.49 E-value=0.19 Score=39.67 Aligned_cols=62 Identities=15% Similarity=0.304 Sum_probs=47.3
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~---~-~~l~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|.+|+. + .+|+.++|+..|+.. -+. ..+.+.+.+|+..+-.. +.+.++++.|..+|.
T Consensus 10 ~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~-~~~~~~~~~i~~~~D~n------~DG~I~F~EF~~lm~ 79 (93)
T d3c1va1 10 VMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK-RTDEAAFQKLMSNLDSN------RDNEVDFQEYCVFLS 79 (93)
T ss_dssp HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTT-CCSHHHHHHHHHHHCTT------CSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhcccc-CCCHHHHHHHHHHHcCC------CCCCCCHHHHHHHHH
Confidence 57889999974 2 469999999999863 222 36788899999987521 346799999998775
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=91.48 E-value=0.081 Score=39.19 Aligned_cols=63 Identities=13% Similarity=0.315 Sum_probs=50.4
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.||..+|..|-.+ ++|+.++|+..|+.- +...++.++++.+|..+.. -+.+.++++.|.++|.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~s~~e~~~~~~~~D~------d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKV-GEEPLTDAEVEEAMKEADE------DGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTT-TTCCCCHHHHHHHHHHHCS------SGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHh-CCCCCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHH
Confidence 4789999999755 899999999999865 3334789999999988752 1346799999999874
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=90.63 E-value=0.18 Score=40.73 Aligned_cols=68 Identities=18% Similarity=0.246 Sum_probs=52.7
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcC-CCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQK-EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.....+|+.+|+.|=.+ ++|+.++|+.+|++-.. ....+.++++.||+.+.. -+.+.++++.|..+|.
T Consensus 36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~------d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 36 SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK------DGDGMIGVDEFAAMIK 106 (107)
T ss_dssp GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHc
Confidence 34667899999999644 89999999999976422 124788999999988752 1346799999999875
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=90.34 E-value=0.26 Score=38.44 Aligned_cols=63 Identities=19% Similarity=0.339 Sum_probs=46.1
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~----~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|++|+.. .+|++++|+..|+++=.. ...+++.+.+++...-. -+.+.++|+.|..++.
T Consensus 9 ~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~------n~Dg~idF~EF~~li~ 78 (87)
T d1e8aa_ 9 GIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDA------NQDEQVDFQEFISLVA 78 (87)
T ss_dssp HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCT------TCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcC------CCCCcCCHHHHHHHHH
Confidence 578899999852 469999999999874321 12367788888887542 2356799999988764
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=90.31 E-value=0.18 Score=39.67 Aligned_cols=64 Identities=13% Similarity=0.322 Sum_probs=47.6
Q ss_pred hHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..|..+|.+|..+ +.|+.++|..-|...... ...+.+.+..|+..+-. -+.+.++++.|..+|.
T Consensus 9 e~l~~~F~~yd~ddG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~------n~DG~I~F~EF~~li~ 76 (92)
T d1a4pa_ 9 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQ------CRDGKVGFQSFFSLIA 76 (92)
T ss_dssp HHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCT------TSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhC------CCCCCCcHHHHHHHHH
Confidence 3588899999877 999999999999764321 11355678888887652 2356799999998875
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=90.15 E-value=0.33 Score=36.34 Aligned_cols=65 Identities=14% Similarity=0.352 Sum_probs=52.1
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+..+|..+|..|=. + ++|+.++|+..|+.. +. ..+.+++..+|..+.. -+.+.++++.|.++|.
T Consensus 6 ~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~l-g~-~~~~~e~~~~~~~~D~------d~dg~I~~~EF~~~m~ 72 (75)
T d1jc2a_ 6 KSEEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVIEEDIEDLMKDSDK------NNDGRIDFDEFLKMME 72 (75)
T ss_dssp CCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHHCS------SSCSEECHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhc-CC-CccHHHHHHHHHHhCC------CCCCcEeHHHHHHHHH
Confidence 456789999999953 3 999999999999874 44 5799999999998752 1246799999999875
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=90.09 E-value=0.075 Score=42.65 Aligned_cols=63 Identities=14% Similarity=0.278 Sum_probs=45.3
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC-----CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE-----DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~-----~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|++|+.+ +.|+.++|+..|+.+... ...+++.+..|+..+.. -+.+.++|+.|..+|.
T Consensus 11 ~l~~~F~~y~~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~------n~DG~I~F~EF~~li~ 79 (100)
T d1psra_ 11 GMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDK------NEDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHTCCTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCT------TCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcC------CCCCcCcHHHHHHHHH
Confidence 577899999866 899999999999975421 01233456677766541 2346799999998875
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=89.97 E-value=0.57 Score=36.64 Aligned_cols=63 Identities=14% Similarity=0.298 Sum_probs=46.1
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~----~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|.+|+.. .+|++.+|+.+|+.+=.. ...+++.+..|+..... -+.+.++|..|..++.
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~------n~Dg~vdF~EF~~li~ 79 (90)
T d3cr5x1 10 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS------DGDGECDFQEFMAFVA 79 (90)
T ss_dssp HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCT------TSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcC------CCCCcCCHHHHHHHHH
Confidence 477899999843 679999999999875321 12356778888887542 2346799999988764
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=89.39 E-value=0.47 Score=36.60 Aligned_cols=63 Identities=16% Similarity=0.291 Sum_probs=44.8
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCC----CCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKED----KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~----~~l~~~~~~~Fl~~~Q~~~----~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
-|..+|++||.. ..|+..+|+.+|+++=..- ..++..+..++..... -+.+.++|..|..++.
T Consensus 11 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~------n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 11 TIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDT------NADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcC------CCCCcCcHHHHHHHHh
Confidence 477899999953 6899999999999853321 1244556777776542 2346799999998764
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.38 E-value=0.13 Score=41.75 Aligned_cols=69 Identities=16% Similarity=0.318 Sum_probs=53.4
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcC-CCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQK-EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
.....+++.+|+.|=.+ ++|+.++|+.+|+.-.. ....+.+.++.+++.+-.. +.+.++++.|...|.|
T Consensus 37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d------~dG~I~~~EF~~~m~s 108 (108)
T d1rroa_ 37 KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADND------GDGKIGADEFQEMVHS 108 (108)
T ss_dssp GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCS------SSSSEEHHHHHHHHTC
T ss_pred cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHcC
Confidence 34667899999999654 89999999999976422 2347889999999987621 3467999999998864
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=89.37 E-value=0.33 Score=40.52 Aligned_cols=66 Identities=18% Similarity=0.381 Sum_probs=52.5
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
.....+|...|..|-.+ ++|+.++|+..|... ++ .++.+++.+|++.+.. +.+.++++.|.+.|++
T Consensus 72 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~-g~-~lt~~e~~~l~~~~d~-------~dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 72 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL-GE-KLSNEEMDELLKGVPV-------KDGMVNYHDFVQMILA 139 (140)
T ss_dssp SCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH-HS-CSCHHHHHHHHHHTTC-------SSCCSTTTHHHHHHHC
T ss_pred hhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHc-CC-CCCHHHHHHHHHhhCC-------CCCEEeHHHHHHHHhc
Confidence 34456799999999644 899999999999865 44 4799999999987641 2357999999999885
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=89.25 E-value=0.25 Score=37.66 Aligned_cols=62 Identities=10% Similarity=0.271 Sum_probs=49.1
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 25 ~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
.|++.+|..|=.+ +.|+.++|+..|+.-. ..+.+++.++|..+-. -+.+.|+++.|..+|.+
T Consensus 6 ~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg---~~~~~ei~~~~~~~D~------d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 6 ADRERIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDT------DGDGFISFDEFTDFARA 69 (81)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TCCHHHHHHHHHHHCT------TCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh---cCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHHH
Confidence 3678889999644 8999999999998653 3588899999988752 13467999999998863
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=88.77 E-value=0.56 Score=36.82 Aligned_cols=63 Identities=13% Similarity=0.217 Sum_probs=46.8
Q ss_pred HHHHHHHHhhCC---C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN---G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~---~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|++|+.. . +|++++|++.|+.+=.. ...+.+.+.+++..... -+.+.++|+.|..+|.
T Consensus 10 ~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~------n~Dg~IdF~EF~~l~~ 79 (93)
T d1ksoa_ 10 AIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT------NKDCEVDFVEYVRSLA 79 (93)
T ss_dssp HHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHH------TTTCEECHHHHHHHHH
T ss_pred HHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcC------CCCCCCcHHHHHHHHH
Confidence 577899999842 3 79999999999875221 12467788999888652 2346799999998776
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=88.75 E-value=0.29 Score=35.55 Aligned_cols=61 Identities=16% Similarity=0.386 Sum_probs=48.3
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 25 ~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
.||..+|..|=.+ ++|+.++|+.-|+.. +. ..+.+++..++..+... +.+.++++.|.++|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~l-g~-~~~~~e~~~l~~~~D~d------~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNL-GE-KLTDEEVDEMIREADID------GDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHTTCTT------CSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHcCCC------CCCcEeHHHHHHHC
Confidence 5789999998644 899999999998864 44 47899999998876521 24679999999865
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=88.75 E-value=0.37 Score=38.93 Aligned_cols=67 Identities=13% Similarity=0.247 Sum_probs=52.3
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+..+|..+|..|=.+ ++++.++|+.+|+.-. ++ ..+.+++.++|+.+-. -+.+.++++.|.+.|.
T Consensus 37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~-~~~~~e~~~~~~~~D~------d~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 37 GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALLAAGDS------DHDGKIGADEFAKMVA 107 (109)
T ss_dssp TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred CCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccC-cCCHHHHHHHHHHhCC------CCCCCEeHHHHHHHHH
Confidence 34567899999999644 8999999999998643 33 4788999999988752 1346799999999875
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=88.37 E-value=0.21 Score=38.94 Aligned_cols=63 Identities=17% Similarity=0.304 Sum_probs=45.6
Q ss_pred hHHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~~----~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..|..+|++|+.. ..++.++|+.+|..+=+. ..+.+.+.+||...- .-+.+.++|+.|..+|.
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~-~~~~~~v~~i~~~~D------~n~DG~IdF~EF~~l~~ 76 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQ-YIRKKGADVWFKELD------INTDGAVNFQEFLILVI 76 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCH-HHHTTCHHHHHHHHC------TTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCC-ccchHHHHHHHHHhC------CCCCCcCcHHHHHHHHH
Confidence 3577899999742 468999999999875333 234456788887654 12356799999998875
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.19 E-value=0.58 Score=40.50 Aligned_cols=61 Identities=20% Similarity=0.276 Sum_probs=47.9
Q ss_pred HHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 27 i~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
|..+|.++++. +.++.++|+..|+..-... ..+.+.|+.||..+.. .+.+.|+++.|..++
T Consensus 2 ~~~~F~~~a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~------~~~G~i~~~EF~~l~ 66 (165)
T d1k94a_ 2 VYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDR------DHTGKMGFNAFKELW 66 (165)
T ss_dssp HHHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCT------TCSSCBCHHHHHHHH
T ss_pred hHHHHHHhcCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHh
Confidence 67899999876 9999999999998764321 3467899999998852 134679999998764
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=88.17 E-value=0.48 Score=35.90 Aligned_cols=61 Identities=21% Similarity=0.438 Sum_probs=47.8
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
|+...|..|=.+ +.|+.++|+..|+.. +. ..+.+++..++..+.. -+.+.++++.|..+|.
T Consensus 15 el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~s~~e~~~~~~~~D~------d~~g~I~~~eF~~~m~ 77 (81)
T d1avsa_ 15 EFKAAFDMFDADGGGDISTKELGTVMRML-GQ-NPTKEELDAIIEEVDE------DGSGTIDFEEFLVMMV 77 (81)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCT------TCCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEchhHHHHHHHHc-CC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHH
Confidence 566778888533 899999999999975 44 4789999999998752 1346799999999874
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=87.80 E-value=0.47 Score=38.30 Aligned_cols=66 Identities=12% Similarity=0.249 Sum_probs=51.7
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+..+++.+|+.|=.+ ++++.++|+.+|+.-. ++ ..+.+++.++|..+-. -+.+.++++.|.++|.
T Consensus 38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~-~ls~~ev~~~~~~~D~------d~dG~I~~~EF~~~m~ 107 (109)
T d1pvaa_ 38 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR-DLTDAETKAFLKAADK------DGDGKIGIDEFETLVH 107 (109)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC-CCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHCC------CCcCcEeHHHHHHHHH
Confidence 4567899999999543 8999999999997543 33 4688999999988642 1356799999999886
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.30 E-value=0.5 Score=34.31 Aligned_cols=61 Identities=15% Similarity=0.344 Sum_probs=48.5
Q ss_pred HHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.++.+|+.|=. + +.|+..+|+..|+.- +. ..+.+++..++..+... +.+.++++.|..+|.
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~l-g~-~~~~~~i~~~~~~~D~d------~dg~I~~~EF~~~m~ 64 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAF-SP-YFTQEDIVKFFEEIDVD------GNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHT-CT-TSCHHHHHHHHHHHCCS------SSSEECHHHHHHHHH
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHHHh-cc-ccchHHHHHHHHHhCCC------CCCeEeHHHHHHHHH
Confidence 46789999954 3 999999999999864 44 47899999999988621 245799999999875
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.72 E-value=0.32 Score=36.43 Aligned_cols=62 Identities=10% Similarity=0.294 Sum_probs=48.4
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|+..+|..|=.+ +.++.++|+..|+.. +. ..+.+++.+++..+.. -+.+.++++.|..+|.
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~t~~e~~~~~~~~D~------~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 10 AEFKEAFALFDKDNNGSISSSELATVMRSL-GL-SPSEAEVNDLMNEIDV------DGNHQIEFSEFLALMS 73 (77)
T ss_dssp HHHHHHHHHTCTTCSSEEEHHHHHHHHHHH-TC-CCCHHHHHHHHHTTCC------SSCCEEEHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCeEChHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHH
Confidence 4677789988543 899999999999875 44 4788999999887652 1346799999999875
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.70 E-value=0.83 Score=37.30 Aligned_cols=62 Identities=16% Similarity=0.392 Sum_probs=49.3
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
+.++..+|..+-.+ +.++.++|..+|.... ..++.+++..++..+... +.+.++++.|.++|
T Consensus 78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g--~~l~~~e~~~l~~~~D~d------~dG~i~~~EF~~~m 141 (141)
T d2obha1 78 KEEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMIDEADRD------GDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--CCCCHHHHHHHHHHHCTT------SSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCccHHHHHHHHHHhC--CCCCHHHHHHHHHHHCCC------CCCCEeHHHHHHhC
Confidence 45688899998654 8999999999998643 357899999999987621 34679999999876
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=86.54 E-value=0.6 Score=36.39 Aligned_cols=64 Identities=13% Similarity=0.215 Sum_probs=48.4
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~---~-~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..|..+|.+|+. + +.|+.++|+.-|+..-.. ...+.+.+..+|+.+-. -..+.++++.|..+|.
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~------d~dG~Idf~EF~~lm~ 79 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE------NGDGEVDFQEFVVLVA 79 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTT------TCCSEECSHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcC------CCCCCCcHHHHHHHHH
Confidence 468889999963 2 589999999999876432 23578889999887652 1346799999998875
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=86.15 E-value=0.54 Score=36.59 Aligned_cols=63 Identities=14% Similarity=0.343 Sum_probs=47.1
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE-DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~---~-~~l~~~~~~~Fl~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|++|+. + .+|+..+|+..|+.+-.. ...+.+.+.++|+.... -+.+.++|+.|...+.
T Consensus 10 ~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~------d~Dg~IdF~EF~~l~~ 77 (89)
T d1k8ua_ 10 LLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDR------NKDQEVNFQEYVTFLG 77 (89)
T ss_dssp HHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHH------TTTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcC------CCCCCCcHHHHHHHHH
Confidence 57789999984 2 369999999999976432 12467788899888652 2346799999998765
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=86.08 E-value=0.6 Score=36.93 Aligned_cols=61 Identities=11% Similarity=0.216 Sum_probs=43.7
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHH-----HcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIE-----VQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~---~-~~l~~~~~~~Fl~~-----~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|.+||. + .+|+..+|+..|+. .+.. .+.+.+..|+..... -+.+.++|..|..++.
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~--~d~~~vd~im~~LD~------n~Dg~vdF~EF~~li~ 79 (95)
T d1qlsa_ 10 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQ--KDPGVLDRMMKKLDL------DSDGQLDFQEFLNLIG 79 (95)
T ss_dssp HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHC--CCTHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHhcC------CCCCcCcHHHHHHHHH
Confidence 47789999984 2 68999999998864 2221 245677888777542 2346799999988765
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=85.72 E-value=0.36 Score=38.19 Aligned_cols=63 Identities=14% Similarity=0.267 Sum_probs=43.5
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~----~~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|.+|++. .+|++++|+.+|++|=..- ..+++.+..|+..... -+.+.++|..|..++.
T Consensus 10 ~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~------n~Dg~vdF~EF~~li~ 79 (94)
T d1j55a_ 10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDA------NGDAQVDFSEFIVFVA 79 (94)
T ss_dssp HHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCS------SSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcC------CCCCcCCHHHHHHHHH
Confidence 577899999853 5799999999998743321 1234557777776541 2356799999998775
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=85.43 E-value=0.96 Score=34.33 Aligned_cols=63 Identities=17% Similarity=0.384 Sum_probs=48.7
Q ss_pred chHHHHHHHHhh-C-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYS-E-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~-~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+++..|+.|- . . +.|+..+|+.-|+. -|. ..+.++++++|..+.. -..+.++++.|..+|.
T Consensus 14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~-lg~-~~t~~el~~~i~~~D~------d~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQ-NPTPEELQEMIDEVDE------DGSGTVDFDEFLVMMV 79 (82)
T ss_dssp HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHH-TTC-CCCHHHHHHHHHTTCT------TCCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHH-cCC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHH
Confidence 357778899984 3 2 68999999999975 445 3789999999998652 1346799999998875
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.12 E-value=0.52 Score=39.20 Aligned_cols=63 Identities=14% Similarity=0.368 Sum_probs=49.9
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
++.++..+|+.|=.+ ++|+.++|+..|..... ..+.+.+..++..+.+ +.+.++++.|.++|.
T Consensus 81 ~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~--~~~~~~~~~~~~~~dd-------~dG~I~~~eF~~~m~ 145 (146)
T d1lkja_ 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE--KLTDAEVDDMLREVSD-------GSGEINIQQFAALLS 145 (146)
T ss_dssp HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTC--SCCHHHHHHHHHHHCC-------SSSEEEHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC--cccHHHHHHHHHhccC-------CCCeEeHHHHHHHhC
Confidence 356788999999533 89999999999987654 3788999999987651 235699999999874
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=85.00 E-value=0.59 Score=38.82 Aligned_cols=65 Identities=18% Similarity=0.281 Sum_probs=50.6
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
....+|..+|..+-.+ +.|+.++|+..|.. -++ ..+.+++..++.... -+.+.++++.|.++|++
T Consensus 78 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~-~g~-~~~~~e~~~l~~~~~-------d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 78 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLAT-LGE-KMTEEEVEELMKGQE-------DSNGCINYEAFVKHIMS 144 (145)
T ss_pred chHHHHHHHHHHhhcCCCCEEcHHHHHHHHHH-hCC-CCCHHHHHHHHhhcC-------CCCCeEEHHHHHHHHhc
Confidence 4566799999998654 89999999999975 455 478999999986422 12356999999999875
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=84.74 E-value=1.2 Score=37.29 Aligned_cols=63 Identities=16% Similarity=0.404 Sum_probs=48.2
Q ss_pred hHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 25 DAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 25 ~ei~~if~~~~-~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
.++..+|..|= .+ ++|+.++|+.+|... +. ..+.+++..||+.+.. -+.+.+++++|.++|.+
T Consensus 96 ~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~-~~-~~~~~~~~~l~~~~D~------d~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 96 EELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVTEEDIEDLMKDSDK------NNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TC-CCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHhh-CC-CCCHHHHHHHHHHhCC------CCCCcEEHHHHHHHHHc
Confidence 45677788873 33 899999999999853 33 4688899999988752 13467999999999863
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=83.56 E-value=1.3 Score=38.28 Aligned_cols=73 Identities=10% Similarity=0.127 Sum_probs=56.5
Q ss_pred cccCCcCCCCchHHHHHHHHh-hCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHH
Q 008582 14 RRFHVAASEAPDAVKSMFDQY-SEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFK 91 (561)
Q Consensus 14 r~~~~~~~~~r~ei~~if~~~-~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~ 91 (561)
..|.+.+.+...+|..+|+.+ ..+ +.++.++|...|+... ...+.+++..++..+... ..+.+++..|..
T Consensus 7 ~~p~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~--~~~s~~~~~~l~~~~d~d------~~~~i~~~ef~~ 78 (182)
T d1y1xa_ 7 YAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAG--VPFSLATTEKLLHMYDKN------HSGEITFDEFKD 78 (182)
T ss_dssp TSTTCCSSCTTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTT--BCCCHHHHHHHHHHHCTT------CSSSBCHHHHHH
T ss_pred CCCCCCCcCcHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhc--ccCchhhhhhhhcccccc------cccccccccccc
Confidence 356677778888999999998 344 9999999999997532 347889999999887521 245789999988
Q ss_pred hhc
Q 008582 92 YLF 94 (561)
Q Consensus 92 ~L~ 94 (561)
++.
T Consensus 79 ~~~ 81 (182)
T d1y1xa_ 79 LHH 81 (182)
T ss_dssp HHH
T ss_pred ccc
Confidence 764
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=83.53 E-value=1 Score=35.97 Aligned_cols=67 Identities=16% Similarity=0.271 Sum_probs=52.4
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcC-CCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQK-EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+..+++.+|+.|=.+ +.++.++|+.+|+.... ....+.+++..|++.+.. -+.+.++++.|...|.
T Consensus 38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~------d~dG~i~~~EF~~~m~ 107 (109)
T d1rwya_ 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDK------DGDGKIGVEEFSTLVA 107 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHH
Confidence 4567889999999543 89999999999987543 224688899999998852 1346799999999875
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.04 E-value=2.1 Score=36.46 Aligned_cols=64 Identities=16% Similarity=0.218 Sum_probs=48.8
Q ss_pred hHHHHHHHHhhCC-CCcCHHHHHHHHHHHc------CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSEN-GTMTVDHLHRFLIEVQ------KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q------~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+++++|.++.++ +.++..+|+..|+..- .....+.+.|..++..+.. -..+.++++.|..++.
T Consensus 4 ~~~r~~F~~~d~~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~------d~~g~i~~~ef~~~~~ 74 (173)
T d1alva_ 4 RQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDS------DTTGKLGFEEFKYLWN 74 (173)
T ss_dssp HHHHHHHHHHHGGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhcc------CCCCcccchhhhhhhh
Confidence 4789999999966 8999999999998642 1223578899999988752 1246799999988654
|