Citrus Sinensis ID: 008590

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
MMALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFMLN
cccccccccEEEEccccccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHccccccEEEEEEccccEEEEEEccccccHHHHHHHHHHcccccEEcccccccccccccccccccccccccccHHHHHHHHHHccccccEEEEEEccccEEEEEEccccccHHHHHHHHHHcccccccccccccccEEEEEcccccHHHHHHHHHHHcccccEEEEEEEccccEEEEEEccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccEEEEEEccccccccEEEEEEccccccccEEEEccccccccccEEEEccccccccccccccccccccccccEEEEccccccEEEEEEEEcccHHHHHHHHHHHHHHcccccHHHHHHccccccccc
cccccccEEEEEcccccccccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEEcccEEEEEEccccccHHHHHHHHHHcccccEEccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEEccccEEEEEccccccHHHHHHHHHHcccccEEEccccccEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEEccccEEEEEccccccHHHHHHHHHHcccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccEEEEEEcccccEEEEEEEEHHHEccccEEEEEcccccccccEEEEcccccccccccccccccccccccEEEEEEEccccEEEEEEEEccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccc
mmalsnrdlqltelngggssdgddredewllnnydgkkerigdgmRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQnkadvvfdpdlvkdeDIKNAIEDAGFEAEILaesstsgpkpqgtivgqytiGGMTCAACVNSVEGILRGLPGVKRAVVALATSlgeveydptviskdDIANAIEDagfeasfvqssgqdkILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISgelevlfdpealssrslvdgiagrsngkfqirvmnpfarmtsrdseeTSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWrcgpflmgdwLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVtgfwsptyfeTSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQsgdtlkvlpgtklpadgiVVWGTSYVnesmvtgeavpvlkeinspviggtinLHGVLHIQATKVGSDAVLSQIISLVETaqmskapiqKFADFVSFFMLN
mmalsnrdlqltelngggssdgddredeWLLNnydgkkerigdgMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKadvvfdpdlvKDEDIKNAIEDAGFEAEILaesstsgpkpqgTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATslgeveydptvISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDgiagrsngkfqirvmnpfARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAgralrngsTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVElapatallvvKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFMLN
MMALSNRDLQLTELNgggssdgddredeWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFMLN
****************************WLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI************GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPF************NMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFM**
************************************************QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILA*************VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNG**********************NMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFMLN
MMALSNRDLQLTELN********DREDEWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFMLN
MMALSNRDLQLTELN****************************GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESS******QGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFMLN
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MMALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFMLN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query560 2.2.26 [Sep-21-2011]
Q9S7J8 1001 Copper-transporting ATPas yes no 0.980 0.548 0.745 0.0
Q9SH30 995 Putative copper-transport no no 0.910 0.512 0.425 1e-110
P35670 1465 Copper-transporting ATPas yes no 0.907 0.346 0.356 9e-81
Q9XT50 1505 Copper-transporting ATPas N/A no 0.905 0.336 0.348 3e-77
P70705 1492 Copper-transporting ATPas yes no 0.910 0.341 0.347 2e-76
Q64446 1462 Copper-transporting ATPas yes no 0.928 0.355 0.334 3e-75
Q64430 1491 Copper-transporting ATPas no no 0.903 0.339 0.345 3e-75
Q04656 1500 Copper-transporting ATPas no no 0.901 0.336 0.345 9e-75
Q64535 1451 Copper-transporting ATPas no no 0.903 0.348 0.336 3e-73
P49015 1476 Copper-transporting ATPas yes no 0.880 0.334 0.335 8e-70
>sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1 Back     alignment and function desciption
 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/565 (74%), Positives = 477/565 (84%), Gaps = 16/565 (2%)

Query: 2   MALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKE-----------RIGDGMRRIQV 50
           MA S RDLQLT + GG SS   D E+  LL++Y  +             R   G+R+IQV
Sbjct: 1   MAPSRRDLQLTPVTGGSSSQISDMEEVGLLDSYHNEANADDILTKIEEGRDVSGLRKIQV 60

Query: 51  GVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFE 110
           GVTGMTCAACSNSVE ALM + GV KASVALLQN+ADVVFDP+LVK+EDIK AIEDAGFE
Sbjct: 61  GVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFE 120

Query: 111 AEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEV 170
           AEILAE  T     Q T+VGQ+TIGGMTCAACVNSVEGILR LPGVKRAVVAL+TSLGEV
Sbjct: 121 AEILAEEQT-----QATLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALSTSLGEV 175

Query: 171 EYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGV 230
           EYDP VI+KDDI NAIEDAGFE S VQS+ QDK++L+V G+L ELDA  LEGIL+   GV
Sbjct: 176 EYDPNVINKDDIVNAIEDAGFEGSLVQSNQQDKLVLRVDGILNELDAQVLEGILTRLNGV 235

Query: 231 RQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNM 290
           RQFR D+ISGELEV+FDPE +SSRSLVDGI     GKF++RVM+P+ R++S+D+ E SNM
Sbjct: 236 RQFRLDRISGELEVVFDPEVVSSRSLVDGIEEDGFGKFKLRVMSPYERLSSKDTGEASNM 295

Query: 291 FRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRF 350
           FR FISSL LSIP+FFI+VICPHI L  ALL+WRCGPF+MGDWL WALVSV+QFVIGKRF
Sbjct: 296 FRRFISSLVLSIPLFFIQVICPHIALFDALLVWRCGPFMMGDWLKWALVSVIQFVIGKRF 355

Query: 351 YTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLF 410
           Y AA RALRNGSTNMDVLVALGTSA+YFYSVGALLYG VTGFWSPTYF+ SAMLITFVL 
Sbjct: 356 YVAAWRALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITFVLL 415

Query: 411 GKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPG 470
           GKYLE LAKGKTSDA+KKLV+L PATA+L+ + K GK + EREIDALLIQ GDTLKV PG
Sbjct: 416 GKYLESLAKGKTSDAMKKLVQLTPATAILLTEGKGGKLVGEREIDALLIQPGDTLKVHPG 475

Query: 471 TKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530
            K+PADG+VVWG+SYVNESMVTGE+VPV KE++SPVIGGTIN+HG LH++ATKVGSDAVL
Sbjct: 476 AKIPADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSDAVL 535

Query: 531 SQIISLVETAQMSKAPIQKFADFVS 555
           SQIISLVETAQMSKAPIQKFAD+V+
Sbjct: 536 SQIISLVETAQMSKAPIQKFADYVA 560
Involved in copper import into the cell. Essential for ethylene signaling, which requires copper. Acts by delivering copper to create functional hormone receptors.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 4
>sp|Q9SH30|HMA5_ARATH Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2 Back     alignment and function description
>sp|P35670|ATP7B_HUMAN Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4 Back     alignment and function description
>sp|Q9XT50|ATP7B_SHEEP Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1 Back     alignment and function description
>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1 SV=1 Back     alignment and function description
>sp|Q64446|ATP7B_MOUSE Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=2 Back     alignment and function description
>sp|Q64430|ATP7A_MOUSE Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=3 Back     alignment and function description
>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3 Back     alignment and function description
>sp|Q64535|ATP7B_RAT Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2 SV=1 Back     alignment and function description
>sp|P49015|ATP7A_CRIGR Copper-transporting ATPase 1 (Fragment) OS=Cricetulus griseus GN=ATP7A PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
255565341 1001 copper-transporting atpase p-type, putat 0.989 0.553 0.774 0.0
224137820 1010 heavy metal ATPase [Populus trichocarpa] 0.980 0.543 0.764 0.0
359472765 1000 PREDICTED: copper-transporting ATPase RA 0.985 0.552 0.774 0.0
356558246 996 PREDICTED: copper-transporting ATPase RA 0.969 0.545 0.774 0.0
307136407 1007 heavy metal ATPase [Cucumis melo subsp. 0.989 0.550 0.745 0.0
224071055 1008 heavy metal ATPase [Populus trichocarpa] 0.980 0.544 0.764 0.0
357449223 1025 Copper-transporting ATPase RAN1 [Medicag 0.989 0.540 0.743 0.0
449530694564 PREDICTED: copper-transporting ATPase RA 0.985 0.978 0.742 0.0
15241582 1001 copper-transporting ATPase RAN1 [Arabido 0.980 0.548 0.745 0.0
14194135 1001 AT5g44790/K23L20_14 [Arabidopsis thalian 0.980 0.548 0.745 0.0
>gi|255565341|ref|XP_002523662.1| copper-transporting atpase p-type, putative [Ricinus communis] gi|223537114|gb|EEF38748.1| copper-transporting atpase p-type, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/572 (77%), Positives = 481/572 (84%), Gaps = 18/572 (3%)

Query: 2   MALSNRDLQLTELNGGGSSDGDDR------EDEWLLNNYDGKKER------------IGD 43
           M+ S RDLQLT++        DD       ED  LL++YD   +             +  
Sbjct: 1   MSPSIRDLQLTQVARQSRPSIDDDNDDGYLEDVRLLDSYDHYDDHRIVIGEEEEEGQVEQ 60

Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           GMRRIQV V GMTCAACSNSVE AL  + GV +ASVALLQNKADVVFDP LVKD+DIKNA
Sbjct: 61  GMRRIQVRVGGMTCAACSNSVESALGCVNGVLRASVALLQNKADVVFDPSLVKDDDIKNA 120

Query: 104 IEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVAL 163
           IEDAGFEAEILAE ST   KP  T++GQ+TIGGMTCAACVNSVEGILR LPGVKRAVVAL
Sbjct: 121 IEDAGFEAEILAEPSTLEAKPSKTLLGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVAL 180

Query: 164 ATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGI 223
           ATSLGEVEYDPTVISKDDI NAIEDAGFE S VQS+ QDKI+L+V G+  E+DA  LEGI
Sbjct: 181 ATSLGEVEYDPTVISKDDIVNAIEDAGFEGSLVQSNQQDKIILRVVGIFSEMDAQLLEGI 240

Query: 224 LSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRD 283
           LS  KGVRQFR++++S ELEV FD E + SR LVDGI G SNGKF++RVMNP+ARMTS+D
Sbjct: 241 LSTLKGVRQFRYNRMSSELEVEFDTEVIGSRLLVDGIEGASNGKFKLRVMNPYARMTSKD 300

Query: 284 SEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQ 343
            EE+S MFRLFISSLFLSIPVFFIRVICP IPL+Y+LLLWRCGPFLMGDWL WALVSVVQ
Sbjct: 301 VEESSTMFRLFISSLFLSIPVFFIRVICPRIPLLYSLLLWRCGPFLMGDWLKWALVSVVQ 360

Query: 344 FVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAM 403
           FVIGKRFY AAGRALRNGSTNMDVLVALGTSA+YFYSV ALLYG  TGFWSPTYFETS+M
Sbjct: 361 FVIGKRFYVAAGRALRNGSTNMDVLVALGTSASYFYSVCALLYGAATGFWSPTYFETSSM 420

Query: 404 LITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGD 463
           LITFVL GKYLE LAKGKTSDAIKKLVELAPATALLVVKDK GKC  EREIDALLIQ GD
Sbjct: 421 LITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKCTAEREIDALLIQPGD 480

Query: 464 TLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATK 523
           TLKVLPG K+PADG+VVWG+SYVNESMVTGE+ PVLKE NS VIGGT+NLHG L IQATK
Sbjct: 481 TLKVLPGAKVPADGVVVWGSSYVNESMVTGESAPVLKEANSLVIGGTVNLHGALQIQATK 540

Query: 524 VGSDAVLSQIISLVETAQMSKAPIQKFADFVS 555
           VGSDAVLSQIISLVETAQMSKAPIQKFADFV+
Sbjct: 541 VGSDAVLSQIISLVETAQMSKAPIQKFADFVA 572

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224137820|ref|XP_002326448.1| heavy metal ATPase [Populus trichocarpa] gi|222833770|gb|EEE72247.1| heavy metal ATPase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359472765|ref|XP_002276004.2| PREDICTED: copper-transporting ATPase RAN1-like [Vitis vinifera] gi|147778109|emb|CAN69730.1| hypothetical protein VITISV_011925 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356558246|ref|XP_003547418.1| PREDICTED: copper-transporting ATPase RAN1-like [Glycine max] Back     alignment and taxonomy information
>gi|307136407|gb|ADN34216.1| heavy metal ATPase [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|224071055|ref|XP_002303349.1| heavy metal ATPase [Populus trichocarpa] gi|222840781|gb|EEE78328.1| heavy metal ATPase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357449223|ref|XP_003594888.1| Copper-transporting ATPase RAN1 [Medicago truncatula] gi|355483936|gb|AES65139.1| Copper-transporting ATPase RAN1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449530694|ref|XP_004172328.1| PREDICTED: copper-transporting ATPase RAN1-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|15241582|ref|NP_199292.1| copper-transporting ATPase RAN1 [Arabidopsis thaliana] gi|12229667|sp|Q9S7J8.1|HMA7_ARATH RecName: Full=Copper-transporting ATPase RAN1; AltName: Full=Protein HEAVY METAL ATPASE 7; AltName: Full=Protein RESPONSIVE TO ANTAGONIST 1 gi|4760370|gb|AAD29109.1|AF082565_1 ATP dependent copper transporter [Arabidopsis thaliana] gi|4760380|gb|AAD29115.1| ATP dependent copper transporter [Arabidopsis thaliana] gi|6850337|gb|AAC79141.2| ATP dependent copper transporter (RAN1) [Arabidopsis thaliana] gi|9758383|dbj|BAB08832.1| ATP dependent copper transporter [Arabidopsis thaliana] gi|332007780|gb|AED95163.1| copper-transporting ATPase RAN1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|14194135|gb|AAK56262.1|AF367273_1 AT5g44790/K23L20_14 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
TAIR|locus:2156354 1001 RAN1 "RESPONSIVE-TO-ANTAGONIST 0.985 0.551 0.736 1.4e-213
TAIR|locus:2031361 995 HMA5 "heavy metal atpase 5" [A 0.912 0.513 0.427 9.8e-103
UNIPROTKB|F5H748 1400 ATP7B "WND/140 kDa" [Homo sapi 0.798 0.319 0.382 2.2e-80
UNIPROTKB|P35670 1465 ATP7B "Copper-transporting ATP 0.798 0.305 0.382 2.9e-80
UNIPROTKB|F1MKI1 1505 ATP7B "Uncharacterized protein 0.751 0.279 0.381 3.2e-77
UNIPROTKB|F1M5X3 1434 Atp7b "Copper-transporting ATP 0.783 0.306 0.376 4.3e-76
RGD|2180 1451 Atp7b "ATPase, Cu++ transporti 0.783 0.302 0.376 4.5e-76
UNIPROTKB|Q9QUG4 1452 Atp7b "Copper-transporting ATP 0.783 0.302 0.376 4.6e-76
MGI|MGI:103297 1462 Atp7b "ATPase, Cu++ transporti 0.783 0.300 0.368 6.3e-76
UNIPROTKB|F1PJE7 1508 ATP7B "Uncharacterized protein 0.751 0.279 0.380 2.1e-75
TAIR|locus:2156354 RAN1 "RESPONSIVE-TO-ANTAGONIST 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2064 (731.6 bits), Expect = 1.4e-213, P = 1.4e-213
 Identities = 419/569 (73%), Positives = 473/569 (83%)

Query:     2 MALSNRDLQLTELNXXXXXXXXXXXXXWLLNNYDG---------KKERIGD--GMRRIQV 50
             MA S RDLQLT +               LL++Y           K E   D  G+R+IQV
Sbjct:     1 MAPSRRDLQLTPVTGGSSSQISDMEEVGLLDSYHNEANADDILTKIEEGRDVSGLRKIQV 60

Query:    51 GVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFE 110
             GVTGMTCAACSNSVE ALM + GV KASVALLQN+ADVVFDP+LVK+EDIK AIEDAGFE
Sbjct:    61 GVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFE 120

Query:   111 AEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEV 170
             AEILAE  T     Q T+VGQ+TIGGMTCAACVNSVEGILR LPGVKRAVVAL+TSLGEV
Sbjct:   121 AEILAEEQT-----QATLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALSTSLGEV 175

Query:   171 EYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGV 230
             EYDP VI+KDDI NAIEDAGFE S VQS+ QDK++L+V G+L ELDA  LEGIL+   GV
Sbjct:   176 EYDPNVINKDDIVNAIEDAGFEGSLVQSNQQDKLVLRVDGILNELDAQVLEGILTRLNGV 235

Query:   231 RQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNM 290
             RQFR D+ISGELEV+FDPE +SSRSLVDGI     GKF++RVM+P+ R++S+D+ E SNM
Sbjct:   236 RQFRLDRISGELEVVFDPEVVSSRSLVDGIEEDGFGKFKLRVMSPYERLSSKDTGEASNM 295

Query:   291 FRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRF 350
             FR FISSL LSIP+FFI+VICPHI L  ALL+WRCGPF+MGDWL WALVSV+QFVIGKRF
Sbjct:   296 FRRFISSLVLSIPLFFIQVICPHIALFDALLVWRCGPFMMGDWLKWALVSVIQFVIGKRF 355

Query:   351 YTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLF 410
             Y AA RALRNGSTNMDVLVALGTSA+YFYSVGALLYG VTGFWSPTYF+ SAMLITFVL 
Sbjct:   356 YVAAWRALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITFVLL 415

Query:   411 GKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPG 470
             GKYLE LAKGKTSDA+KKLV+L PATA+L+ + K GK + EREIDALLIQ GDTLKV PG
Sbjct:   416 GKYLESLAKGKTSDAMKKLVQLTPATAILLTEGKGGKLVGEREIDALLIQPGDTLKVHPG 475

Query:   471 TKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530
              K+PADG+VVWG+SYVNESMVTGE+VPV KE++SPVIGGTIN+HG LH++ATKVGSDAVL
Sbjct:   476 AKIPADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSDAVL 535

Query:   531 SQIISLVETAQMSKAPIQKFADFV-SFFM 558
             SQIISLVETAQMSKAPIQKFAD+V S F+
Sbjct:   536 SQIISLVETAQMSKAPIQKFADYVASIFV 564
GO:0000166 "nucleotide binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0005507 "copper ion binding" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0006754 "ATP biosynthetic process" evidence=IEA
GO:0006812 "cation transport" evidence=IEA
GO:0006825 "copper ion transport" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA
GO:0030001 "metal ion transport" evidence=IEA
GO:0043682 "copper-transporting ATPase activity" evidence=IEA
GO:0046034 "ATP metabolic process" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0005375 "copper ion transmembrane transporter activity" evidence=IGI
GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;IMP;TAS
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009723 "response to ethylene stimulus" evidence=IMP
GO:0010119 "regulation of stomatal movement" evidence=IMP
GO:0000041 "transition metal ion transport" evidence=RCA
GO:0000303 "response to superoxide" evidence=RCA
GO:0006487 "protein N-linked glycosylation" evidence=RCA
GO:0007165 "signal transduction" evidence=RCA
GO:0008219 "cell death" evidence=RCA
GO:0009755 "hormone-mediated signaling pathway" evidence=RCA
GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2031361 HMA5 "heavy metal atpase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F5H748 ATP7B "WND/140 kDa" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P35670 ATP7B "Copper-transporting ATPase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MKI1 ATP7B "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1M5X3 Atp7b "Copper-transporting ATPase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|2180 Atp7b "ATPase, Cu++ transporting, beta polypeptide" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9QUG4 Atp7b "Copper-transporting ATPase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:103297 Atp7b "ATPase, Cu++ transporting, beta polypeptide" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PJE7 ATP7B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9S7J8HMA7_ARATH3, ., 6, ., 3, ., 40.74510.98030.5484yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.30.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_290004
SubName- Full=Putative uncharacterized protein; (1010 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
TIGR01511 572 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans 2e-87
COG2217 713 COG2217, ZntA, Cation transport ATPase [Inorganic 7e-86
TIGR01525 556 TIGR01525, ATPase-IB_hvy, heavy metal translocatin 1e-53
PRK10671 834 PRK10671, copA, copper exporting ATPase; Provision 2e-37
TIGR01512 536 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb 2e-34
pfam00122222 pfam00122, E1-E2_ATPase, E1-E2 ATPase 2e-34
TIGR01494 543 TIGR01494, ATPase_P-type, ATPase, P-type (transpor 3e-22
cd0037163 cd00371, HMA, Heavy-metal-associated domain (HMA) 7e-18
cd0037163 cd00371, HMA, Heavy-metal-associated domain (HMA) 1e-16
COG260871 COG2608, CopZ, Copper chaperone [Inorganic ion tra 4e-15
PRK11033 741 PRK11033, zntA, zinc/cadmium/mercury/lead-transpor 1e-14
COG260871 COG2608, CopZ, Copper chaperone [Inorganic ion tra 6e-14
pfam0040362 pfam00403, HMA, Heavy-metal-associated domain 7e-14
COG2216 681 COG2216, KdpB, High-affinity K+ transport system, 1e-13
pfam0040362 pfam00403, HMA, Heavy-metal-associated domain 2e-13
TIGR01497 675 TIGR01497, kdpB, K+-transporting ATPase, B subunit 4e-12
PRK01122 679 PRK01122, PRK01122, potassium-transporting ATPase 4e-12
PRK14010 673 PRK14010, PRK14010, potassium-transporting ATPase 3e-11
COG2217 713 COG2217, ZntA, Cation transport ATPase [Inorganic 7e-11
COG2217 713 COG2217, ZntA, Cation transport ATPase [Inorganic 2e-10
TIGR0000366 TIGR00003, TIGR00003, copper ion binding protein 2e-10
PRK10671 834 PRK10671, copA, copper exporting ATPase; Provision 1e-09
COG0474 917 COG0474, MgtA, Cation transport ATPase [Inorganic 2e-09
PRK13748 561 PRK13748, PRK13748, putative mercuric reductase; P 5e-08
TIGR0000366 TIGR00003, TIGR00003, copper ion binding protein 3e-07
TIGR0205292 TIGR02052, MerP, mercuric transport protein peripl 1e-06
TIGR0205292 TIGR02052, MerP, mercuric transport protein peripl 1e-06
TIGR01657 1054 TIGR01657, P-ATPase-V, P-type ATPase of unknown pu 5e-06
PRK10671 834 PRK10671, copA, copper exporting ATPase; Provision 7e-06
PRK13748561 PRK13748, PRK13748, putative mercuric reductase; P 7e-06
PRK11033 741 PRK11033, zntA, zinc/cadmium/mercury/lead-transpor 8e-05
PRK11033 741 PRK11033, zntA, zinc/cadmium/mercury/lead-transpor 3e-04
PLN02957238 PLN02957, PLN02957, copper, zinc superoxide dismut 4e-04
TIGR01524 867 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating 4e-04
TIGR01517 944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 4e-04
>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase Back     alignment and domain information 
 Score =  281 bits (720), Expect = 2e-87
 Identities = 108/211 (51%), Positives = 146/211 (69%), Gaps = 6/211 (2%)

Query: 346 IGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVV-TGFWSPTYFETSAML 404
            G+ FY +A +ALR+ + NMD L+ALGT+ AY YS+ ALL   V TG    T+F+ SAML
Sbjct: 1   AGRPFYKSAWKALRHKTPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAML 60

Query: 405 ITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDT 464
           ITF+L G++LE+LAKG+ SDA+ KL +L P+TA L+  D      E  E+   L+Q GD 
Sbjct: 61  ITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDG-----EIEEVPVELLQPGDI 115

Query: 465 LKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKV 524
           ++VLPG K+P DG V+ G S V+ES+VTGE++PV K++  PVI GT+N  G L ++AT  
Sbjct: 116 VRVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATAT 175

Query: 525 GSDAVLSQIISLVETAQMSKAPIQKFADFVS 555
           G D  L+QI+ LV  AQ SKAPIQ+ AD V+
Sbjct: 176 GEDTTLAQIVRLVRQAQQSKAPIQRLADKVA 206

This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase Back     alignment and domain information
>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones Back     alignment and domain information
>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones Back     alignment and domain information
>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain Back     alignment and domain information
>gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain Back     alignment and domain information
>gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit Back     alignment and domain information
>gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|188014 TIGR00003, TIGR00003, copper ion binding protein Back     alignment and domain information
>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional Back     alignment and domain information
>gnl|CDD|188014 TIGR00003, TIGR00003, copper ion binding protein Back     alignment and domain information
>gnl|CDD|131107 TIGR02052, MerP, mercuric transport protein periplasmic component Back     alignment and domain information
>gnl|CDD|131107 TIGR02052, MerP, mercuric transport protein periplasmic component Back     alignment and domain information
>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional Back     alignment and domain information
>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase Back     alignment and domain information
>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 560
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 100.0
PRK10671 834 copA copper exporting ATPase; Provisional 100.0
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 100.0
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 100.0
TIGR01511 562 ATPase-IB1_Cu copper-(or silver)-translocating P-t 100.0
TIGR01512 536 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo 99.97
TIGR01525 556 ATPase-IB_hvy heavy metal translocating P-type ATP 99.97
TIGR01647 755 ATPase-IIIA_H plasma-membrane proton-efflux P-type 99.96
TIGR01497 675 kdpB K+-transporting ATPase, B subunit. One sequen 99.96
PRK01122 679 potassium-transporting ATPase subunit B; Provision 99.96
PRK14010 673 potassium-transporting ATPase subunit B; Provision 99.96
PRK10517 902 magnesium-transporting ATPase MgtA; Provisional 99.95
TIGR01524 867 ATPase-IIIB_Mg magnesium-translocating P-type ATPa 99.95
TIGR01522 884 ATPase-IIA2_Ca golgi membrane calcium-translocatin 99.94
PF00122230 E1-E2_ATPase: E1-E2 ATPase p-type cation-transport 99.94
PRK15122 903 magnesium-transporting ATPase; Provisional 99.93
TIGR01106 997 ATPase-IIC_X-K sodium or proton efflux -- potassiu 99.92
TIGR01116 917 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium 99.92
TIGR01523 1053 ATPase-IID_K-Na potassium and/or sodium efflux P-t 99.92
TIGR01517 941 ATPase-IIB_Ca plasma-membrane calcium-translocatin 99.92
TIGR01494 499 ATPase_P-type ATPase, P-type (transporting), HAD s 99.91
KOG0202 972 consensus Ca2+ transporting ATPase [Inorganic ion 99.91
KOG0205 942 consensus Plasma membrane H+-transporting ATPase [ 99.89
TIGR01657 1054 P-ATPase-V P-type ATPase of unknown pump specifici 99.89
COG0474 917 MgtA Cation transport ATPase [Inorganic ion transp 99.88
KOG0204 1034 consensus Calcium transporting ATPase [Inorganic i 99.87
COG2216 681 KdpB High-affinity K+ transport system, ATPase cha 99.84
KOG0208 1140 consensus Cation transport ATPase [Inorganic ion t 99.75
TIGR01652 1057 ATPase-Plipid phospholipid-translocating P-type AT 99.67
KOG0203 1019 consensus Na+/K+ ATPase, alpha subunit [Inorganic 99.65
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 99.62
PLN03190 1178 aminophospholipid translocase; Provisional 99.56
KOG0209 1160 consensus P-type ATPase [Inorganic ion transport a 99.51
PF0040362 HMA: Heavy-metal-associated domain; InterPro: IPR0 99.3
PRK10671 834 copA copper exporting ATPase; Provisional 99.25
COG260871 CopZ Copper chaperone [Inorganic ion transport and 99.2
PF0040362 HMA: Heavy-metal-associated domain; InterPro: IPR0 99.2
COG260871 CopZ Copper chaperone [Inorganic ion transport and 99.17
KOG0210 1051 consensus P-type ATPase [Inorganic ion transport a 98.56
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 98.07
TIGR0000368 copper ion binding protein. This model describes a 97.69
TIGR0000368 copper ion binding protein. This model describes a 97.68
KOG0206 1151 consensus P-type ATPase [General function predicti 97.63
KOG4656247 consensus Copper chaperone for superoxide dismutas 97.6
KOG4656247 consensus Copper chaperone for superoxide dismutas 97.4
PLN02957238 copper, zinc superoxide dismutase 97.36
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 97.22
PLN02957238 copper, zinc superoxide dismutase 97.02
KOG160373 consensus Copper chaperone [Inorganic ion transpor 96.99
KOG160373 consensus Copper chaperone [Inorganic ion transpor 96.98
TIGR0205292 MerP mercuric transport protein periplasmic compon 92.91
TIGR0205292 MerP mercuric transport protein periplasmic compon 92.3
PF00873 1021 ACR_tran: AcrB/AcrD/AcrF family; InterPro: IPR0010 91.73
cd0037163 HMA Heavy-metal-associated domain (HMA) is a conse 86.19
PRK09577 1032 multidrug efflux protein; Reviewed 84.49
PRK14054172 methionine sulfoxide reductase A; Provisional 82.16
PRK14054172 methionine sulfoxide reductase A; Provisional 81.53
PRK10555 1037 aminoglycoside/multidrug efflux system; Provisiona 81.35
PRK13748 561 putative mercuric reductase; Provisional 80.18
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-79  Score=645.73  Aligned_cols=491  Identities=46%  Similarity=0.721  Sum_probs=447.9

Q ss_pred             CCCCChhhHHHHHHHhcCCCCeeEEEEEecCCeEEEEECCCCCCHHHHHHHHHhcCCchhhhhccCCCCCCCCCeeEEEe
Q 008590           53 TGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQY  132 (560)
Q Consensus        53 ~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~  132 (560)
                      .||+|.+|...++++++..+|+.+..+++..+++.+.|+ ...+++.+.+.+++.||++...+++...      ..+..+
T Consensus         1 ~gmtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~-~~~~~~~i~~~ied~gf~~~~~~~~~~~------~~~~~l   73 (951)
T KOG0207|consen    1 KGMTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYD-NIVSPESIKETIEDMGFEASLLSDSEIT------ASKCYL   73 (951)
T ss_pred             CCccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEe-eccCHHHHHHHhhcccceeeecccCccc------cceeEE
Confidence            489999999999999999999999999999999999999 7889999999999999999887665422      226789


Q ss_pred             ecCCCCchhhHHHHHHHhcCCCCeeEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccCC---ceeEEEEEe
Q 008590          133 TIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSG---QDKILLQVT  209 (560)
Q Consensus       133 ~i~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~d~~~~~~~~i~~~l~~~G~~~~~~~~~~---~~~~~~~v~  209 (560)
                      ++.||+|.+|+.++|+.+++.+|+.++.+.+..+++++.|||..++...+.+.++++||.+...++.+   ...+.|.+.
T Consensus        74 ~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~~~~~~~~~~i~L~v~  153 (951)
T KOG0207|consen   74 SVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIESVNGNSNQKIYLDVL  153 (951)
T ss_pred             EecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehhcccCCCCCcEEEEee
Confidence            99999999999999999999999999999999999999999999999999999999999998776542   157899999


Q ss_pred             cccchhhHHHHHhhhccCCCeeEEEeecCCCeEEEEeCCCCCChhHHHHHHHhcCCCcceEEecC---ccccccccchHH
Q 008590          210 GVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMN---PFARMTSRDSEE  286 (560)
Q Consensus       210 g~~c~~c~~~ie~~l~~~~gV~~~~vn~~~~~~~v~ydp~~~~~~~l~~~i~~~g~~~~~~~~~~---~~~~~~~~~~~~  286 (560)
                      ||.|..|...|+..+.+++||.+++++..+.++.|.|||..++++++.+.++..+   +.+....   ...+...+...+
T Consensus       154 g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~---~~~~~~~~~~~~~~~~l~~~~e  230 (951)
T KOG0207|consen  154 GMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETG---FEASVRPYGDTTFKNSLKHKEE  230 (951)
T ss_pred             cccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhc---ccceeeeccccchhhhhhhhhH
Confidence            9999999999999999999999999999999999999999999999999999998   4433221   111112234567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHhhhccCCCcHHHHHHHHHHHHhhheeCHHHHHHHHHHHHcCCCChh
Q 008590          287 TSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMD  366 (560)
Q Consensus       287 ~~~~~~~~~~~~~~~l~~~~~~m~l~~~~~~~~~~~~~~~~~~~~~~~~~~la~~v~~~~g~~~~~~a~~~l~~~~~~md  366 (560)
                      .++|++.|.+...+++|++++.+++++..++...+....+++++..++.++|+++++|..||+||..||++|+++..|||
T Consensus       231 i~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~vqf~~G~~fy~~A~ksL~~g~~nMd  310 (951)
T KOG0207|consen  231 IRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGNSLSFVLATPVQFVGGRPFYLAAYKSLKRGSANMD  310 (951)
T ss_pred             HHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhhHHHhhhheeeEEecceeeHHHHHHHHhcCCCCce
Confidence            78999999999999999999888888876644443344677888899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCceEEEEEecCCC
Q 008590          367 VLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVG  446 (560)
Q Consensus       367 ~Li~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~g  446 (560)
                      +|+.++++++|+||++.++.....+. +..|||++.|+++|+.+|+|+|.+++.|+..++.+|++++|.++.++   .+|
T Consensus       311 vLv~L~t~aay~~S~~~~~~~~~~~~-~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii---~~g  386 (951)
T KOG0207|consen  311 VLVVLGTTAAYFYSIFSLLAAVVFDS-PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATII---EDG  386 (951)
T ss_pred             eehhhHHHHHHHHHHHHHHHHHHccC-cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEe---ecC
Confidence            99999999999999999988777644 78899999999999999999999999999999999999999999999   555


Q ss_pred             cceeeEEeeCCCcCcCCEEEEcCCCccCcceEEEeccceeecccccCCCcccccCCCCcEEEeeeeecceEEEEEEEecc
Q 008590          447 KCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGS  526 (560)
Q Consensus       447 ~~~~~~~v~~~~l~~GDii~v~~g~~iP~Dg~v~~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~~~~g~~~~~v~~~g~  526 (560)
                      +  .+++||++.+++||+|.|+||++||+||+|++|++.||||+||||++||.|++|+.|.|||+|.+|.+.+++++.|.
T Consensus       387 ~--~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~  464 (951)
T KOG0207|consen  387 S--EEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGG  464 (951)
T ss_pred             C--cceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccc
Confidence            2  27999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhhccCChhHHHHhHhhhccc
Q 008590          527 DAVLSQIISLVETAQMSKAPIQKFADFVSFFML  559 (560)
Q Consensus       527 ~t~~~~i~~~~~~~~~~k~~~q~~~d~~~~~~~  559 (560)
                      ||.++||++++++||.+|+|+||++||+|+|||
T Consensus       465 dttla~IvkLVEEAQ~sKapiQq~aDkia~yFv  497 (951)
T KOG0207|consen  465 DTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFV  497 (951)
T ss_pred             cchHHHHHHHHHHHHcccchHHHHHHHhhhcCC
Confidence            999999999999999999999999999999997

>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase Back     alignment and domain information
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>TIGR01497 kdpB K+-transporting ATPase, B subunit Back     alignment and domain information
>PRK01122 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>PRK14010 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>PRK10517 magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase Back     alignment and domain information
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PRK15122 magnesium-transporting ATPase; Provisional Back     alignment and domain information
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03190 aminophospholipid translocase; Provisional Back     alignment and domain information
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures Back     alignment and domain information
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00003 copper ion binding protein Back     alignment and domain information
>TIGR00003 copper ion binding protein Back     alignment and domain information
>KOG0206 consensus P-type ATPase [General function prediction only] Back     alignment and domain information
>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02957 copper, zinc superoxide dismutase Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>PLN02957 copper, zinc superoxide dismutase Back     alignment and domain information
>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02052 MerP mercuric transport protein periplasmic component Back     alignment and domain information
>TIGR02052 MerP mercuric transport protein periplasmic component Back     alignment and domain information
>PF00873 ACR_tran: AcrB/AcrD/AcrF family; InterPro: IPR001036 The Escherichia coli acrA and acrB genes encode a multi-drug efflux system that is believed to protect the bacterium against hydrophobic inhibitors [] Back     alignment and domain information
>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones Back     alignment and domain information
>PRK09577 multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK14054 methionine sulfoxide reductase A; Provisional Back     alignment and domain information
>PRK14054 methionine sulfoxide reductase A; Provisional Back     alignment and domain information
>PRK10555 aminoglycoside/multidrug efflux system; Provisional Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
3rfu_A 736 Crystal Structure Of A Copper-Transporting Pib-Type 2e-38
3j09_A 723 High Resolution Helical Reconstruction Of The Bacte 3e-38
3j08_A 645 High Resolution Helical Reconstruction Of The Bacte 2e-36
2kij_A124 Solution Structure Of The Actuator Domain Of The Co 1e-23
2ew9_A149 Solution Structure Of Apowln5-6 Length = 149 5e-23
2ew9_A149 Solution Structure Of Apowln5-6 Length = 149 2e-14
3dxs_X74 Crystal Structure Of A Copper Binding Domain From H 2e-22
3dxs_X74 Crystal Structure Of A Copper Binding Domain From H 2e-06
2hc8_A113 Structure Of The A. Fulgidus Copa A-Domain Length = 5e-20
2rml_A147 Solution Structure Of The N-Terminal Soluble Domain 4e-16
2rop_A202 Solution Structure Of Domains 3 And 4 Of Human Atp7 4e-16
2rop_A202 Solution Structure Of Domains 3 And 4 Of Human Atp7 1e-08
1p6t_A151 Structure Characterization Of The Water Soluble Reg 6e-16
1aw0_A72 Fourth Metal-Binding Domain Of The Menkes Copper- T 8e-12
2ggp_B72 Solution Structure Of The Atx1-Cu(I)-Ccc2a Complex 2e-11
2ggp_B72 Solution Structure Of The Atx1-Cu(I)-Ccc2a Complex 3e-07
1fvs_A72 Solution Structure Of The Yeast Copper Transporter 2e-11
1fvs_A72 Solution Structure Of The Yeast Copper Transporter 3e-07
1yju_A75 Solution Structure Of The Apo Form Of The Sixth Sol 1e-10
1yju_A75 Solution Structure Of The Apo Form Of The Sixth Sol 9e-10
1yjr_A75 Solution Structure Of The Apo Form Of The Sixth Sol 5e-10
1yjr_A75 Solution Structure Of The Apo Form Of The Sixth Sol 3e-09
1q8l_A84 Second Metal Binding Domain Of The Menkes Atpase Le 7e-08
1q8l_A84 Second Metal Binding Domain Of The Menkes Atpase Le 3e-06
1s6o_A76 Solution Structure And Backbone Dynamics Of The Apo 7e-08
1s6o_A76 Solution Structure And Backbone Dynamics Of The Apo 3e-06
1kvi_A79 Solution Structure Of The Reduced Form Of The First 6e-07
1kvi_A79 Solution Structure Of The Reduced Form Of The First 8e-04
2k1r_A73 The Solution Nmr Structure Of The Complex Between M 6e-07
2k1r_A73 The Solution Nmr Structure Of The Complex Between M 9e-04
2ldi_A71 Nmr Solution Structure Of Ziaan Sub Mutant Length = 7e-07
2ldi_A71 Nmr Solution Structure Of Ziaan Sub Mutant Length = 8e-06
1y3k_A77 Solution Structure Of The Apo Form Of The Fifth Dom 1e-06
1p8g_A73 The Solution Structure Of Apo Copz From Bacillus Su 1e-06
1p8g_A73 The Solution Structure Of Apo Copz From Bacillus Su 2e-04
2qif_A69 Crystal Structure Of A Metallochaperone With A Tetr 1e-06
2qif_A69 Crystal Structure Of A Metallochaperone With A Tetr 2e-04
2ofh_X111 Solution Structure Of The N-Terminal Domain Of The 2e-06
2ofh_X111 Solution Structure Of The N-Terminal Domain Of The 3e-05
2ofg_X111 Solution Structure Of The N-Terminal Domain Of The 2e-06
2ofg_X111 Solution Structure Of The N-Terminal Domain Of The 3e-05
3cjk_B75 Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Le 3e-06
3cjk_B75 Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Le 8e-04
2l3m_A71 Solution Structure Of The Putative Copper-Ion-Bindi 4e-06
1kqk_A80 Solution Structure Of The N-Terminal Domain Of A Po 5e-06
2voy_A80 Cryoem Model Of Copa, The Copper Transporting Atpas 5e-06
1opz_A76 A Core Mutation Affecting The Folding Properties Of 1e-05
1opz_A76 A Core Mutation Affecting The Folding Properties Of 3e-05
1afi_A72 Structure Of The Reduced Form Of Merp, The Periplas 1e-04
1osd_A72 Crystal Structure Of Oxidized Merp From Ralstonia M 4e-04
>pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 Back     alignment and structure 
Iteration: 1

 Score =  157 bits (396), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/282 (36%), Positives = 155/282 (54%), Gaps = 26/282 (9%)
Query: 284 SEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGD---WLNWALVS 340
           S E  +M R F  +L L+IPV  + +    +             F+ G+   W+   L +
Sbjct: 75  SPEYLDMRRRFWIALMLTIPVVILEMGGHGLKH-----------FISGNGSSWIQLLLAT 123
Query: 341 VVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVV--TGFWS---- 394
            V    G  F+    ++L+ G  NM  L+A+G   A+ YS+ A+L+  V    F S    
Sbjct: 124 PVVLWGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGV 183
Query: 395 -PTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEERE 453
              YFE +A++ T VL G+ LE+ A+ +T  AI+ L++L P +A  + +D       E E
Sbjct: 184 VAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDG-----SEEE 238
Query: 454 IDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINL 513
           +    +  GD L+V PG K+P DG V  G S+V+ESMVTGE +PV KE ++ VIG TIN 
Sbjct: 239 VSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQ 298
Query: 514 HGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVS 555
            G   ++A  VGSD +L++I+ +V  AQ S+APIQ+ AD VS
Sbjct: 299 TGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVS 340
>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 Back     alignment and structure
>pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 Back     alignment and structure
>pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 Back     alignment and structure
>pdb|2EW9|A Chain A, Solution Structure Of Apowln5-6 Length = 149 Back     alignment and structure
>pdb|2EW9|A Chain A, Solution Structure Of Apowln5-6 Length = 149 Back     alignment and structure
>pdb|3DXS|X Chain X, Crystal Structure Of A Copper Binding Domain From Hma7, A P- Type Atpase Length = 74 Back     alignment and structure
>pdb|3DXS|X Chain X, Crystal Structure Of A Copper Binding Domain From Hma7, A P- Type Atpase Length = 74 Back     alignment and structure
>pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 Back     alignment and structure
>pdb|2RML|A Chain A, Solution Structure Of The N-Terminal Soluble Domains Of Bacillus Subtilis Copa Length = 147 Back     alignment and structure
>pdb|2ROP|A Chain A, Solution Structure Of Domains 3 And 4 Of Human Atp7b Length = 202 Back     alignment and structure
>pdb|2ROP|A Chain A, Solution Structure Of Domains 3 And 4 Of Human Atp7b Length = 202 Back     alignment and structure
>pdb|1P6T|A Chain A, Structure Characterization Of The Water Soluble Region Of P- Type Atpase Copa From Bacillus Subtilis Length = 151 Back     alignment and structure
>pdb|1AW0|A Chain A, Fourth Metal-Binding Domain Of The Menkes Copper- Transporting Atpase, Nmr, 20 Structures Length = 72 Back     alignment and structure
>pdb|2GGP|B Chain B, Solution Structure Of The Atx1-Cu(I)-Ccc2a Complex Length = 72 Back     alignment and structure
>pdb|2GGP|B Chain B, Solution Structure Of The Atx1-Cu(I)-Ccc2a Complex Length = 72 Back     alignment and structure
>pdb|1FVS|A Chain A, Solution Structure Of The Yeast Copper Transporter Domain Ccc2a In The Apo And Cu(I) Load States Length = 72 Back     alignment and structure
>pdb|1FVS|A Chain A, Solution Structure Of The Yeast Copper Transporter Domain Ccc2a In The Apo And Cu(I) Load States Length = 72 Back     alignment and structure
>pdb|1YJU|A Chain A, Solution Structure Of The Apo Form Of The Sixth Soluble Domain Of Menkes Protein Length = 75 Back     alignment and structure
>pdb|1YJU|A Chain A, Solution Structure Of The Apo Form Of The Sixth Soluble Domain Of Menkes Protein Length = 75 Back     alignment and structure
>pdb|1YJR|A Chain A, Solution Structure Of The Apo Form Of The Sixth Soluble Domain A69p Mutant Of Menkes Protein Length = 75 Back     alignment and structure
>pdb|1YJR|A Chain A, Solution Structure Of The Apo Form Of The Sixth Soluble Domain A69p Mutant Of Menkes Protein Length = 75 Back     alignment and structure
>pdb|1Q8L|A Chain A, Second Metal Binding Domain Of The Menkes Atpase Length = 84 Back     alignment and structure
>pdb|1Q8L|A Chain A, Second Metal Binding Domain Of The Menkes Atpase Length = 84 Back     alignment and structure
>pdb|1S6O|A Chain A, Solution Structure And Backbone Dynamics Of The Apo-Form Of The Second Metal-Binding Domain Of The Menkes Protein Atp7a Length = 76 Back     alignment and structure
>pdb|1S6O|A Chain A, Solution Structure And Backbone Dynamics Of The Apo-Form Of The Second Metal-Binding Domain Of The Menkes Protein Atp7a Length = 76 Back     alignment and structure
>pdb|1KVI|A Chain A, Solution Structure Of The Reduced Form Of The First Heavy Metal Binding Motif Of The Menkes Protein Length = 79 Back     alignment and structure
>pdb|1KVI|A Chain A, Solution Structure Of The Reduced Form Of The First Heavy Metal Binding Motif Of The Menkes Protein Length = 79 Back     alignment and structure
>pdb|2K1R|A Chain A, The Solution Nmr Structure Of The Complex Between Mnk1 And Hah1 Mediated By Cu(I) Length = 73 Back     alignment and structure
>pdb|2K1R|A Chain A, The Solution Nmr Structure Of The Complex Between Mnk1 And Hah1 Mediated By Cu(I) Length = 73 Back     alignment and structure
>pdb|2LDI|A Chain A, Nmr Solution Structure Of Ziaan Sub Mutant Length = 71 Back     alignment and structure
>pdb|2LDI|A Chain A, Nmr Solution Structure Of Ziaan Sub Mutant Length = 71 Back     alignment and structure
>pdb|1Y3K|A Chain A, Solution Structure Of The Apo Form Of The Fifth Domain Of Menkes Protein Length = 77 Back     alignment and structure
>pdb|1P8G|A Chain A, The Solution Structure Of Apo Copz From Bacillus Subtilis Length = 73 Back     alignment and structure
>pdb|1P8G|A Chain A, The Solution Structure Of Apo Copz From Bacillus Subtilis Length = 73 Back     alignment and structure
>pdb|2QIF|A Chain A, Crystal Structure Of A Metallochaperone With A Tetranuclear Cu(I) Cluster Length = 69 Back     alignment and structure
>pdb|2QIF|A Chain A, Crystal Structure Of A Metallochaperone With A Tetranuclear Cu(I) Cluster Length = 69 Back     alignment and structure
>pdb|2OFH|X Chain X, Solution Structure Of The N-Terminal Domain Of The Zinc(Ii) Atpase Ziaa In Its Apo Form Length = 111 Back     alignment and structure
>pdb|2OFH|X Chain X, Solution Structure Of The N-Terminal Domain Of The Zinc(Ii) Atpase Ziaa In Its Apo Form Length = 111 Back     alignment and structure
>pdb|2OFG|X Chain X, Solution Structure Of The N-Terminal Domain Of The Zinc(Ii) Atpase Ziaa In Its Apo Form Length = 111 Back     alignment and structure
>pdb|2OFG|X Chain X, Solution Structure Of The N-Terminal Domain Of The Zinc(Ii) Atpase Ziaa In Its Apo Form Length = 111 Back     alignment and structure
>pdb|3CJK|B Chain B, Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Length = 75 Back     alignment and structure
>pdb|3CJK|B Chain B, Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Length = 75 Back     alignment and structure
>pdb|2L3M|A Chain A, Solution Structure Of The Putative Copper-Ion-Binding Protein From Bacillus Anthracis Str. Ames Length = 71 Back     alignment and structure
>pdb|1KQK|A Chain A, Solution Structure Of The N-Terminal Domain Of A Potential Copper-Translocating P-Type Atpase From Bacillus Subtilis In The Cu(I)loaded State Length = 80 Back     alignment and structure
>pdb|2VOY|A Chain A, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 80 Back     alignment and structure
>pdb|1OPZ|A Chain A, A Core Mutation Affecting The Folding Properties Of A Soluble Domain Of The Atpase Protein Copa From Bacillus Subtilis Length = 76 Back     alignment and structure
>pdb|1OPZ|A Chain A, A Core Mutation Affecting The Folding Properties Of A Soluble Domain Of The Atpase Protein Copa From Bacillus Subtilis Length = 76 Back     alignment and structure
>pdb|1AFI|A Chain A, Structure Of The Reduced Form Of Merp, The Periplasmic Protein From The Bacterial Mercury Detoxification System, Nmr, 20 Structures Length = 72 Back     alignment and structure
>pdb|1OSD|A Chain A, Crystal Structure Of Oxidized Merp From Ralstonia Metallidurans Ch34 Length = 72 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 1e-100
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 2e-18
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 8e-18
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 2e-99
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 2e-97
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 1e-61
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 1e-57
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 2e-30
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 7e-23
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 6e-52
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 1e-29
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 8e-51
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 2e-24
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 2e-24
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 7e-05
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 3e-44
3dxs_X74 Copper-transporting ATPase RAN1; CXXC motif, ferre 2e-28
3dxs_X74 Copper-transporting ATPase RAN1; CXXC motif, ferre 5e-25
2l3m_A71 Copper-ION-binding protein; structural genomics, c 3e-27
2l3m_A71 Copper-ION-binding protein; structural genomics, c 2e-24
2kkh_A95 Putative heavy metal transporter; zinc transport, 6e-27
2kkh_A95 Putative heavy metal transporter; zinc transport, 2e-25
1kvi_A79 Copper-transporting ATPase 1; menkes, Cu-protein, 8e-27
1kvi_A79 Copper-transporting ATPase 1; menkes, Cu-protein, 1e-24
1q8l_A84 Copper-transporting ATPase 1; metal binding protei 1e-26
1q8l_A84 Copper-transporting ATPase 1; metal binding protei 2e-26
1fvq_A72 Copper-transporting ATPase; APO-CCC2A, hydrolase; 2e-26
1fvq_A72 Copper-transporting ATPase; APO-CCC2A, hydrolase; 7e-25
1y3j_A77 Copper-transporting ATPase 1; ferrodoxin-like fold 5e-26
1y3j_A77 Copper-transporting ATPase 1; ferrodoxin-like fold 3e-25
1aw0_A72 Menkes copper-transporting ATPase; copper-binding 6e-26
1aw0_A72 Menkes copper-transporting ATPase; copper-binding 1e-25
3cjk_B75 Copper-transporting ATPase 1; HAH1, ATP7B, menkes 7e-26
3cjk_B75 Copper-transporting ATPase 1; HAH1, ATP7B, menkes 4e-25
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 2e-25
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 6e-24
2ofg_X111 Zinc-transporting ATPase; ferredoxin-like fold, be 2e-25
2ofg_X111 Zinc-transporting ATPase; ferredoxin-like fold, be 3e-24
1yjr_A75 Copper-transporting ATPase 1; metallochaperone, pr 3e-25
1yjr_A75 Copper-transporting ATPase 1; metallochaperone, pr 9e-25
2ldi_A71 Zinc-transporting ATPase; metal homeostasis, metal 3e-25
2ldi_A71 Zinc-transporting ATPase; metal homeostasis, metal 4e-24
1cpz_A68 Protein (COPZ); copper chaperone, metal transport, 4e-25
1cpz_A68 Protein (COPZ); copper chaperone, metal transport, 7e-25
1osd_A72 MERP, hypothetical protein MERP; mercury resistanc 3e-24
1osd_A72 MERP, hypothetical protein MERP; mercury resistanc 1e-22
1jww_A80 Potential copper-transporting ATPase; beta-alpha-b 5e-24
1jww_A80 Potential copper-transporting ATPase; beta-alpha-b 1e-22
2g9o_A90 Copper-transporting ATPase 1; menkes disease, solu 5e-24
2g9o_A90 Copper-transporting ATPase 1; menkes disease, solu 2e-23
1opz_A76 Potential copper-transporting ATPase; mutation, fo 1e-22
1opz_A76 Potential copper-transporting ATPase; mutation, fo 2e-22
2xmw_A71 PACS-N, cation-transporting ATPase PACS; hydrolase 1e-19
2xmw_A71 PACS-N, cation-transporting ATPase PACS; hydrolase 4e-19
2kt2_A69 Mercuric reductase; nmera, MERA, HMA domain, mercu 2e-19
2kt2_A69 Mercuric reductase; nmera, MERA, HMA domain, mercu 2e-18
1mwy_A73 ZNTA; open-faced beta-sandwich fold, beta-alpha-be 4e-19
1mwy_A73 ZNTA; open-faced beta-sandwich fold, beta-alpha-be 3e-18
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 4e-19
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 2e-17
1yg0_A66 COP associated protein; open-faced beta-sandwich, 2e-17
1yg0_A66 COP associated protein; open-faced beta-sandwich, 4e-17
3fry_A73 Probable copper-exporting P-type ATPase A; transpo 2e-16
3fry_A73 Probable copper-exporting P-type ATPase A; transpo 7e-12
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 3e-15
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 2e-14
2aj0_A71 Probable cadmium-transporting ATPase; ferrodoxin-l 1e-13
2aj0_A71 Probable cadmium-transporting ATPase; ferrodoxin-l 2e-12
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 8e-13
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 8e-12
2kyz_A67 Heavy metal binding protein; structural genomics, 2e-11
2kyz_A67 Heavy metal binding protein; structural genomics, 7e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-10
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 3e-09
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 1e-08
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 7e-09
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 8e-09
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 3e-08
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 4e-08
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 8e-07
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 1e-06
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 8e-06
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 2e-06
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 5e-06
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 5e-04
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 6e-04
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
 Score =  319 bits (819), Expect = e-100
 Identities = 114/355 (32%), Positives = 177/355 (49%), Gaps = 34/355 (9%)

Query: 203 KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGI-- 260
           +  ++VTG+ C +    +E  + + +GV + R +  +    + FD + +   ++   I  
Sbjct: 3   ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIED 62

Query: 261 AGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYAL 320
            G          +       S + E  S M R    + F  + + F+     H       
Sbjct: 63  LGYG--------VVDEQAAVSAEVEHLSRMKRKLYVAAFAGVLLLFL----AHFI----- 105

Query: 321 LLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYS 380
                      D++   +     F  G   + AA  ALR  + NMDV+ ++G  AA+  S
Sbjct: 106 ------SLPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLAS 159

Query: 381 VGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLV 440
           V +    +   +   +++ETS +L+ F+L G+ LE  AK +T +AIKKLV L   TA+ V
Sbjct: 160 VLSTAGVLPREY---SFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAV-V 215

Query: 441 VKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLK 500
           ++D      +E  +    +  GD + V PG K+P DG+VV G SYV+ESM++GE VPVLK
Sbjct: 216 IRDG-----KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLK 270

Query: 501 EINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVS 555
                V G TIN  GVL I+AT+VG + +L+QI+ LVE A  SK PIQ+ AD V 
Sbjct: 271 SKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVV 325
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149 Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149 Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149 Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151 Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151 Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 Back     alignment and structure
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74 Back     alignment and structure
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74 Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71 Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71 Back     alignment and structure
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95 Back     alignment and structure
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95 Back     alignment and structure
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79 Back     alignment and structure
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79 Back     alignment and structure
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84 Back     alignment and structure
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84 Back     alignment and structure
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72 Back     alignment and structure
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72 Back     alignment and structure
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77 Back     alignment and structure
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77 Back     alignment and structure
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72 Back     alignment and structure
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72 Back     alignment and structure
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75 Back     alignment and structure
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75 Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69 Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69 Back     alignment and structure
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75 Back     alignment and structure
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75 Back     alignment and structure
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71 Back     alignment and structure
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71 Back     alignment and structure
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68 Back     alignment and structure
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68 Back     alignment and structure
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72 Back     alignment and structure
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72 Back     alignment and structure
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80 Back     alignment and structure
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80 Back     alignment and structure
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90 Back     alignment and structure
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90 Back     alignment and structure
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76 Back     alignment and structure
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76 Back     alignment and structure
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71 Back     alignment and structure
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71 Back     alignment and structure
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69 Back     alignment and structure
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69 Back     alignment and structure
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73 Back     alignment and structure
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73 Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66 Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66 Back     alignment and structure
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66 Back     alignment and structure
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66 Back     alignment and structure
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73 Back     alignment and structure
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73 Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85 Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85 Back     alignment and structure
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71 Back     alignment and structure
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71 Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64 Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64 Back     alignment and structure
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67 Back     alignment and structure
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98 Back     alignment and structure
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68 Back     alignment and structure
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68 Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 Back     alignment and structure
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73 Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73 Back     alignment and structure
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249 Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 100.0
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 100.0
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 100.0
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 99.97
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 99.96
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 99.94
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 99.94
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 99.93
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 99.93
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 99.91
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 99.85
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 99.83
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 99.81
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 99.79
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 99.78
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 99.72
3dxs_X74 Copper-transporting ATPase RAN1; CXXC motif, ferre 99.29
3dxs_X74 Copper-transporting ATPase RAN1; CXXC motif, ferre 99.22
4a4j_A69 Pacszia, cation-transporting ATPase PACS; hydrolas 99.21
2ofg_X111 Zinc-transporting ATPase; ferredoxin-like fold, be 99.16
2ofg_X111 Zinc-transporting ATPase; ferredoxin-like fold, be 99.13
4a4j_A69 Pacszia, cation-transporting ATPase PACS; hydrolas 99.12
2l3m_A71 Copper-ION-binding protein; structural genomics, c 99.08
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 99.08
1osd_A72 MERP, hypothetical protein MERP; mercury resistanc 99.08
3fry_A73 Probable copper-exporting P-type ATPase A; transpo 99.08
1y3j_A77 Copper-transporting ATPase 1; ferrodoxin-like fold 99.05
3cjk_B75 Copper-transporting ATPase 1; HAH1, ATP7B, menkes 99.05
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 99.04
3fry_A73 Probable copper-exporting P-type ATPase A; transpo 99.04
1kvi_A79 Copper-transporting ATPase 1; menkes, Cu-protein, 99.03
1q8l_A84 Copper-transporting ATPase 1; metal binding protei 99.03
2g9o_A90 Copper-transporting ATPase 1; menkes disease, solu 99.03
2xmw_A71 PACS-N, cation-transporting ATPase PACS; hydrolase 99.02
2l3m_A71 Copper-ION-binding protein; structural genomics, c 99.02
1cpz_A68 Protein (COPZ); copper chaperone, metal transport, 99.02
1aw0_A72 Menkes copper-transporting ATPase; copper-binding 99.02
1yg0_A66 COP associated protein; open-faced beta-sandwich, 99.01
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 99.01
1mwy_A73 ZNTA; open-faced beta-sandwich fold, beta-alpha-be 98.97
1fvq_A72 Copper-transporting ATPase; APO-CCC2A, hydrolase; 98.97
1osd_A72 MERP, hypothetical protein MERP; mercury resistanc 98.97
2kt2_A69 Mercuric reductase; nmera, MERA, HMA domain, mercu 98.96
1opz_A76 Potential copper-transporting ATPase; mutation, fo 98.96
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 98.95
2ldi_A71 Zinc-transporting ATPase; metal homeostasis, metal 98.94
1yjr_A75 Copper-transporting ATPase 1; metallochaperone, pr 98.93
3cjk_B75 Copper-transporting ATPase 1; HAH1, ATP7B, menkes 98.93
2g9o_A90 Copper-transporting ATPase 1; menkes disease, solu 98.92
1jww_A80 Potential copper-transporting ATPase; beta-alpha-b 98.92
1q8l_A84 Copper-transporting ATPase 1; metal binding protei 98.91
1kvi_A79 Copper-transporting ATPase 1; menkes, Cu-protein, 98.91
1opz_A76 Potential copper-transporting ATPase; mutation, fo 98.9
1mwy_A73 ZNTA; open-faced beta-sandwich fold, beta-alpha-be 98.9
1y3j_A77 Copper-transporting ATPase 1; ferrodoxin-like fold 98.9
2xmw_A71 PACS-N, cation-transporting ATPase PACS; hydrolase 98.9
1aw0_A72 Menkes copper-transporting ATPase; copper-binding 98.9
1cpz_A68 Protein (COPZ); copper chaperone, metal transport, 98.89
1yg0_A66 COP associated protein; open-faced beta-sandwich, 98.88
2ldi_A71 Zinc-transporting ATPase; metal homeostasis, metal 98.88
2kkh_A95 Putative heavy metal transporter; zinc transport, 98.87
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 98.86
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 98.84
1fvq_A72 Copper-transporting ATPase; APO-CCC2A, hydrolase; 98.83
1jww_A80 Potential copper-transporting ATPase; beta-alpha-b 98.82
2kkh_A95 Putative heavy metal transporter; zinc transport, 98.81
2kt2_A69 Mercuric reductase; nmera, MERA, HMA domain, mercu 98.81
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 98.8
2kyz_A67 Heavy metal binding protein; structural genomics, 98.8
1yjr_A75 Copper-transporting ATPase 1; metallochaperone, pr 98.8
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 98.79
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 98.77
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 98.75
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 98.74
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 98.71
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 98.71
2kyz_A67 Heavy metal binding protein; structural genomics, 98.69
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 98.66
2aj0_A71 Probable cadmium-transporting ATPase; ferrodoxin-l 98.49
2aj0_A71 Probable cadmium-transporting ATPase; ferrodoxin-l 98.41
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 98.34
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 98.32
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 98.22
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 98.19
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 98.18
2v50_A 1052 Multidrug resistance protein MEXB; DDM, RND, membr 84.84
4gwb_A168 Peptide methionine sulfoxide reductase MSRA 3; str 82.65
4gwb_A168 Peptide methionine sulfoxide reductase MSRA 3; str 80.86
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
Probab=100.00  E-value=3.3e-53  Score=469.94  Aligned_cols=327  Identities=34%  Similarity=0.519  Sum_probs=280.1

Q ss_pred             eEEEEEecccchhhHHHHHhhhccCCCeeEEEeecCCCeEEEEeCCCCCChhHHHHHHHhcCCCcceEEecCcccccccc
Q 008590          203 KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSR  282 (560)
Q Consensus       203 ~~~~~v~g~~c~~c~~~ie~~l~~~~gV~~~~vn~~~~~~~v~ydp~~~~~~~l~~~i~~~g~~~~~~~~~~~~~~~~~~  282 (560)
                      +.++.++||+|.+|+..+|+.+.+.+||.++++|+.++++.|.|+|...+.+++.+.+++.|   |+..........   
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~G---y~~~~~~~~~~~---   76 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLG---YGVVDEQAAVSA---   76 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHC---CEESSCCCCCCC---
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcC---Ccccccccccch---
Confidence            56899999999999999999999999999999999999999999999999999999999999   665432211110   


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHhhhccCCCcHHHHHHHHHHHHhhheeCHHHHHHHHHHHHcCC
Q 008590          283 DSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGS  362 (560)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~l~~~~~~m~l~~~~~~~~~~~~~~~~~~~~~~~~~~la~~v~~~~g~~~~~~a~~~l~~~~  362 (560)
                      ..++.+.++++++.++++++|++++++ +..+|           .   ..|+.++|++|+++|.||||++.||++++++.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~---~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~  141 (723)
T 3j09_A           77 EVEHLSRMKRKLYVAAFAGVLLLFLAH-FISLP-----------Y---EDFVQLLIALPAIFYSGSSIFKAAFSALRRRT  141 (723)
T ss_dssp             CCCCCCCSCCCSSSTTTTHHHHHHHTT-SSCSS-----------S---SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHH-Hhccc-----------h---HHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCC
Confidence            001111222334444555555543332 11111           1   13556778999999999999999999999999


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCceEEEEEe
Q 008590          363 TNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVK  442 (560)
Q Consensus       363 ~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~  442 (560)
                      +|||+|++++++++|+||++.++...   .....||++++++++++++|+++|.++++|+.+.+++|+++.|.+++++  
T Consensus       142 ~~md~l~~l~~~~a~~~s~~~~~~~~---~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~--  216 (723)
T 3j09_A          142 LNMDVMYSMGVGAAFLASVLSTAGVL---PREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI--  216 (723)
T ss_dssp             TTSCSSCSCHHHHHHHHHHHHHHTTT---TCCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE--
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE--
Confidence            99999999999999999999876421   1122389999999999999999999999999999999999999999998  


Q ss_pred             cCCCcceeeEEeeCCCcCcCCEEEEcCCCccCcceEEEeccceeecccccCCCcccccCCCCcEEEeeeeecceEEEEEE
Q 008590          443 DKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQAT  522 (560)
Q Consensus       443 ~~~g~~~~~~~v~~~~l~~GDii~v~~g~~iP~Dg~v~~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~~~~g~~~~~v~  522 (560)
                       |||   ++++||+++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++||.||+||.+.+|.++++|+
T Consensus       217 -r~g---~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~  292 (723)
T 3j09_A          217 -RDG---KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRAT  292 (723)
T ss_dssp             -ETT---EEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEE
T ss_pred             -ECC---EEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEE
Confidence             888   8899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecchhHHHHHHHHHHHhhccCChhHHHHhHhhhccc
Q 008590          523 KVGSDAVLSQIISLVETAQMSKAPIQKFADFVSFFML  559 (560)
Q Consensus       523 ~~g~~t~~~~i~~~~~~~~~~k~~~q~~~d~~~~~~~  559 (560)
                      ++|.+|.++||.+++++++.+|+|+|+++|+++.+|+
T Consensus       293 ~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~  329 (723)
T 3j09_A          293 RVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI  329 (723)
T ss_dssp             ECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHH
T ss_pred             EecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999875
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Back     alignment and structure
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Back     alignment and structure
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Back     alignment and structure
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 Back     alignment and structure
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 Back     alignment and structure
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A Back     alignment and structure
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Back     alignment and structure
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Back     alignment and structure
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Back     alignment and structure
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Back     alignment and structure
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Back     alignment and structure
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Back     alignment and structure
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Back     alignment and structure
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Back     alignment and structure
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Back     alignment and structure
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Back     alignment and structure
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Back     alignment and structure
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Back     alignment and structure
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Back     alignment and structure
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Back     alignment and structure
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Back     alignment and structure
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Back     alignment and structure
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Back     alignment and structure
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Back     alignment and structure
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Back     alignment and structure
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Back     alignment and structure
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Back     alignment and structure
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Back     alignment and structure
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Back     alignment and structure
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Back     alignment and structure
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Back     alignment and structure
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Back     alignment and structure
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Back     alignment and structure
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Back     alignment and structure
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Back     alignment and structure
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Back     alignment and structure
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Back     alignment and structure
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Back     alignment and structure
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Back     alignment and structure
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Back     alignment and structure
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Back     alignment and structure
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Back     alignment and structure
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Back     alignment and structure
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Back     alignment and structure
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Back     alignment and structure
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Back     alignment and structure
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Back     alignment and structure
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Back     alignment and structure
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Back     alignment and structure
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01} Back     alignment and structure
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti} Back     alignment and structure
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 560
d1kvja_79 d.58.17.1 (A:) Menkes copper-transporting ATPase { 8e-22
d1kvja_79 d.58.17.1 (A:) Menkes copper-transporting ATPase { 8e-19
d1kvja_79 d.58.17.1 (A:) Menkes copper-transporting ATPase { 1e-04
d2ggpb172 d.58.17.1 (B:1-72) Copper transporter domain ccc2a 3e-21
d2ggpb172 d.58.17.1 (B:1-72) Copper transporter domain ccc2a 7e-19
d1osda_72 d.58.17.1 (A:) Mercuric ion binding protein MerP { 8e-21
d1osda_72 d.58.17.1 (A:) Mercuric ion binding protein MerP { 7e-20
d1p6ta279 d.58.17.1 (A:73-151) Potential copper-translocatin 1e-20
d1p6ta279 d.58.17.1 (A:73-151) Potential copper-translocatin 2e-19
d1p6ta279 d.58.17.1 (A:73-151) Potential copper-translocatin 0.002
d2qifa169 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt 2e-20
d2qifa169 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt 4e-19
d1cpza_68 d.58.17.1 (A:) Copper chaperone {Enterococcus hira 7e-20
d1cpza_68 d.58.17.1 (A:) Copper chaperone {Enterococcus hira 2e-19
d1q8la_84 d.58.17.1 (A:) Menkes copper-transporting ATPase { 1e-19
d1q8la_84 d.58.17.1 (A:) Menkes copper-transporting ATPase { 4e-17
d1p6ta172 d.58.17.1 (A:1-72) Potential copper-translocating 2e-19
d1p6ta172 d.58.17.1 (A:1-72) Potential copper-translocating 3e-18
d1p6ta172 d.58.17.1 (A:1-72) Potential copper-translocating 9e-04
d2aw0a_72 d.58.17.1 (A:) Menkes copper-transporting ATPase { 3e-19
d2aw0a_72 d.58.17.1 (A:) Menkes copper-transporting ATPase { 5e-19
d2aw0a_72 d.58.17.1 (A:) Menkes copper-transporting ATPase { 0.002
d1mwza_73 d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, 2e-17
d1mwza_73 d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, 4e-17
d1sb6a_64 d.58.17.1 (A:) Copper chaperone {Synechocystis sp. 1e-13
d1sb6a_64 d.58.17.1 (A:) Copper chaperone {Synechocystis sp. 3e-12
d1qupa272 d.58.17.1 (A:2-73) Copper chaperone for superoxide 3e-13
d1qupa272 d.58.17.1 (A:2-73) Copper chaperone for superoxide 7e-13
d1fe0a_66 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 4e-12
d1fe0a_66 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 2e-11
d1cc8a_72 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 6e-12
d1cc8a_72 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 8e-11
d1wpga1115 b.82.7.1 (A:125-239) Calcium ATPase, transduction 2e-06
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.2 bits (216), Expect = 8e-22
 Identities = 23/70 (32%), Positives = 41/70 (58%)

Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           G+  + + V GMTC +C  ++E  +  + GV    V+L +  A +++DP L   + ++ A
Sbjct: 6   GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEA 65

Query: 104 IEDAGFEAEI 113
           I+D GF+A I
Sbjct: 66  IDDMGFDAVI 75
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 Back     information, alignment and structure
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66 Back     information, alignment and structure
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66 Back     information, alignment and structure
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
d1wpga1115 Calcium ATPase, transduction domain A {Rabbit (Ory 99.9
d2aw0a_72 Menkes copper-transporting ATPase {Human (Homo sap 99.52
d1osda_72 Mercuric ion binding protein MerP {Ralstonia metal 99.51
d1cpza_68 Copper chaperone {Enterococcus hirae [TaxId: 1354] 99.51
d2qifa169 Copper chaperone {Bacillus subtilis, CopZ [TaxId: 99.49
d1kvja_79 Menkes copper-transporting ATPase {Human (Homo sap 99.49
d2ggpb172 Copper transporter domain ccc2a {Baker's yeast (Sa 99.48
d1q8la_84 Menkes copper-transporting ATPase {Human (Homo sap 99.48
d1p6ta172 Potential copper-translocating P-type ATPase CopA 99.47
d1p6ta279 Potential copper-translocating P-type ATPase CopA 99.46
d2qifa169 Copper chaperone {Bacillus subtilis, CopZ [TaxId: 99.44
d1cpza_68 Copper chaperone {Enterococcus hirae [TaxId: 1354] 99.42
d1osda_72 Mercuric ion binding protein MerP {Ralstonia metal 99.41
d1kvja_79 Menkes copper-transporting ATPase {Human (Homo sap 99.4
d2aw0a_72 Menkes copper-transporting ATPase {Human (Homo sap 99.4
d1p6ta172 Potential copper-translocating P-type ATPase CopA 99.38
d2ggpb172 Copper transporter domain ccc2a {Baker's yeast (Sa 99.38
d1q8la_84 Menkes copper-transporting ATPase {Human (Homo sap 99.35
d1p6ta279 Potential copper-translocating P-type ATPase CopA 99.34
d1mwza_73 Metal ion-transporting ATPase ZntA, N-terminal dom 99.32
d1sb6a_64 Copper chaperone {Synechocystis sp. pcc 6803, Scat 99.26
d1mwza_73 Metal ion-transporting ATPase ZntA, N-terminal dom 99.23
d1sb6a_64 Copper chaperone {Synechocystis sp. pcc 6803, Scat 99.2
d1fe0a_66 ATX1 metallochaperone protein (ATOX1) {Human (Homo 99.17
d1cc8a_72 ATX1 metallochaperone protein (ATOX1) {Baker's yea 99.16
d1qupa272 Copper chaperone for superoxide dismutase, N-termi 99.16
d1qupa272 Copper chaperone for superoxide dismutase, N-termi 99.09
d1fe0a_66 ATX1 metallochaperone protein (ATOX1) {Human (Homo 99.08
d1cc8a_72 ATX1 metallochaperone protein (ATOX1) {Baker's yea 99.08
d1jdqa_98 Hypothetical protein TM0983 {Thermotoga maritima [ 90.23
d1je3a_97 hypothetical protein YedF (EC005) {Escherichia col 84.82
d1jdqa_98 Hypothetical protein TM0983 {Thermotoga maritima [ 82.25
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.90  E-value=3.5e-24  Score=176.94  Aligned_cols=98  Identities=26%  Similarity=0.303  Sum_probs=86.6

Q ss_pred             eEEEEEecCCCcceeeEEeeCCCcCcCCEEEEcCCCccCcceEEEeccc---eeecccccCCCcccccCCC---------
Q 008590          436 TALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTS---YVNESMVTGEAVPVLKEIN---------  503 (560)
Q Consensus       436 ~~~v~~~~~~g~~~~~~~v~~~~l~~GDii~v~~g~~iP~Dg~v~~g~~---~vdes~lTGEs~pv~k~~g---------  503 (560)
                      .++|+   |+|+. ..++|+.++|+|||+|.+++|++|||||+|+++++   .||||+|||||.|+.|.++         
T Consensus         2 ~~kV~---R~g~~-~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~   77 (115)
T d1wpga1           2 MGKVY---RADRK-SVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVN   77 (115)
T ss_dssp             EEEEE---BSSCS-SCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCG
T ss_pred             ceEEE---ECCCc-eEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccc
Confidence            56777   77732 23689999999999999999999999999997664   4999999999999999764         


Q ss_pred             ----CcEEEeeeeecceEEEEEEEecchhHHHHHHHHH
Q 008590          504 ----SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLV  537 (560)
Q Consensus       504 ----~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~  537 (560)
                          +.+|+||.+.+|.+++.|+++|.+|.+|||.+++
T Consensus        78 ~~~~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i  115 (115)
T d1wpga1          78 QDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM  115 (115)
T ss_dssp             GGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred             ccccceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence                3499999999999999999999999999999875
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Back     information, alignment and structure
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Back     information, alignment and structure
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Back     information, alignment and structure
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1je3a_ d.68.3.3 (A:) hypothetical protein YedF (EC005) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure