Citrus Sinensis ID: 008725

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550------
MNSLLANGISSFSPQPTVDSPKLSKGFHPKLENPKFIVPKSSRLFKVRADVGYGSSTISSDPSSSPGNLSTSTQSSDDKIQEILRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFCSISEAIREHPDLVRKYLGRVVPSEDNYYAALNAAVFSDGSFCYIPKNTKCPMPISTYFRINAMETGQFERTLIVADEGSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGNGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG
ccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccCECccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHccccEEEEEEcEEEEEcHHHHHHHccEEEccHHHHHHHcHHHHHHHHcccccccccHHHHHHHHHccccCEEEEccccCCcccEEEEEEEcccccccccEEEEEEccccEEEEEccccccccccccEEEEEEEEEEEcccEEEEEEEEccccccccccccEEEEEEccCECcccccEEEEEEEEcccEEEEECccEEEEccccCEEEEEEEEEcccCECcccccEEEEccccccEEEEEEEECcccCEEEEEEEEEcccccccccCECccCEEccccccccccccEEEEcccCEEEEccccccccHHHHHHHHHccccHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHHHHccccc
********IS*********************************LFKVR**********************************ILRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAP**********EADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFCSISEAIREHPDLVRKYLGRVVPSEDNYYAALNAAVFSDGSFCYIPKNTKCPMPISTYFRINAMETGQFERTLIVADEGSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGNGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG
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MNSLLANGISSFSPQPTVDSPKLSKGFHPKLENPKFIVPKSSRLFKVRADVGYGSSTISSDPSSSPGNLSTSTQSSDDKIQEILRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFCSISEAIREHPDLVRKYLGRVVPSEDNYYAALNAAVFSDGSFCYIPKNTKCPMPISTYFRINAMETGQFERTLIVADEGSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGNGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
UPF0051 protein ABCI8, chloroplastic Involved in light signaling, probably by mediating the transport and correct distribution of protoporphyrin IX, a chlorophyll precursor, in response to far-red light.confidentQ9ZS97
FeS cluster assembly protein SufB The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake from extracellular iron chelators under iron limitation.probableQ83KW2
UPF0051 protein ycf24 probableO78473

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4DN7, chain A
Confidence level:very confident
Coverage over the Query: 145-553
View the alignment between query and template
View the model in PyMOL
Template: 1VH4, chain A
Confidence level:very confident
Coverage over the Query: 125-554
View the alignment between query and template
View the model in PyMOL