Citrus Sinensis ID: 008749

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-----
MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSGNLSKL
cccccccccccccccccccccCECcccccccccccccccccHHHHHHHcccccccccccEEEEcccccEEcHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHccccEEccccccccHHHHHHHHHHcccEEEEEccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEccccccccccEEEEccHHHHHHHHHHHHHccccccccccccccEEEEEccHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEcccHHHHHHHHccccccccccccccEEECccccccHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccEEEEEcccccccccccccEEEEECcccccccccccHHHHHHccccccccccccEEEEcccccEEEEcccHHHHHccccccccHHHHHHHHHcccccEEEEcccccccccccEEEEEEccccccccHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHHccccccc
****************CSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSG*****
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSGNLSKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
4-coumarate--CoA ligase-like 9 Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors. Converts 12-oxo-phytodienoic acid (OPDA) into OPDA-CoA.probableQ84P23
4-coumarate--CoA ligase-like 5 probableQ7F1X5
4-coumarate--CoA ligase-like 6 probableQ8RU95

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.13.-.-Acting on single donors with incorporation of molecular oxygen.probable
1.13.12.-With incorporation of one atom of oxygen.probable
1.13.12.7Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TSY, chain A
Confidence level:very confident
Coverage over the Query: 20-469
View the alignment between query and template
View the model in PyMOL