Citrus Sinensis ID: 008749

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-----
MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSGNLSKL
cccccccccccccccccccccEEEccccccccccccccccHHHHHHHHcccccccccccEEEEcccccEEcHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHccccEEccccccccHHHHHHHHHHcccEEEEEccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEccccccccccEEEEccHHHHHHHHHHHHHHcccccccccccccEEEEEccHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEcccHHHHHHHHccccccccccccccEEEEccccccHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccEEEEEcccccccccccccEEEEEEcccccccccccHHHHHHccccccccccccEEEEcccccEEEEcccHHHHHccccccccHHHHHHHHHcccccEEEEcccccccccccEEEEEEccccccccHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHHccccccc
cccccHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEccccEEcHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHcccEEEEEcHHHHHHcccccEEEEEccccHHHHHHHHHcccccccccccccccccEEEEEccccccccccEEEcHHHHHHHHHHHHHHccccccccccccccEEEEEccHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHcccEEEcccHHHHHHHHHccccccccHHHHHHHHcccccccHHHHHHHHHHccccEEEEcccccccccEEEEcccccccccccccccEcccEEEEEEcccccccccccccEEEEEccccHcccccccHHHHHHHHccccccccccEEEEcccccEEEEcccHHHEEEccccccHHHHHHHHHHcccHHHEEEEEccccccccEEEEEEEEcccccccHHHHHHHHHHHcHHcccccEEEEEccccccccccEcHHHccHHHHccccccc
magtnsnglidpnsgfcsqtktfhsvrpkiplppssqplsvtqFTLSILHksatttaapflmnaatgrrltypeflRQTNSLTLSLQKhyslskndvafilspssfeiPVLYFSLLSLgvvvspanplgstseishqlhlskpsiafatsrtshklppnirtvlvdsPEFLSLLstqnqndvvisppavvnqsDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHhveyganpaepqpsgevslitlplfhvFGFLALVRVVAVSETAVFMERFDFETMLKTVDKykltsmpvspplVVALTKseltkkydlsslqylscggaplgkevtdkfkekfpsveiiqgygltecgglassmrdseetkrhgsvgrlhelmeakvvdpvtgdalspaqkgelwlrgptimkgyigdnkatietvdsegwlktgdlcyfdsngFLFIVDRLKELIKYkayqippaelehllqsnpeiadaavipypdeeagqipmafvvrkpgssineAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSGNLSKL
magtnsnglidpnsgFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFAtsrtshklppNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYkltsmpvspPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKvvdpvtgdalspaqkgelwlrgPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVnsipkseagkilrRELVNhalsgnlskl
MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSGNLSKL
****************************************VTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPA*********************************NIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGA*********EVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGL*************************KVVDPVTGDAL**AQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELV***********
****************CSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQN****VISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSG*****
********LIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGL***************VGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSGNLSKL
*************SGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHAL*******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNIRTVLVDSPEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALSGNLSKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query555 2.2.26 [Sep-21-2011]
Q84P23562 4-coumarate--CoA ligase-l yes no 0.989 0.976 0.592 0.0
Q8RU95598 4-coumarate--CoA ligase-l yes no 0.967 0.897 0.499 1e-161
Q7F1X5542 4-coumarate--CoA ligase-l yes no 0.940 0.963 0.510 1e-158
Q84P21546 4-coumarate--CoA ligase-l no no 0.942 0.957 0.456 1e-140
Q69RG7558 4-coumarate--CoA ligase-l no no 0.951 0.946 0.483 1e-139
Q3E6Y4552 4-coumarate--CoA ligase-l no no 0.963 0.969 0.455 1e-137
P0C5B6550 4-coumarate--CoA ligase-l no no 0.963 0.972 0.457 1e-137
Q84P25565 4-coumarate--CoA ligase-l no no 0.929 0.913 0.459 1e-133
Q84P26550 4-coumarate--CoA ligase-l no no 0.951 0.96 0.448 1e-132
Q10S72552 4-coumarate--CoA ligase-l no no 0.951 0.956 0.442 1e-129
>sp|Q84P23|4CLL9_ARATH 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2 Back     alignment and function desciption
 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/567 (59%), Positives = 432/567 (76%), Gaps = 18/567 (3%)

Query: 1   MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSA------- 53
           +  TN + LID +SGF  +T  +HS+RP + LPP  QPLS  +F LS+L KS+       
Sbjct: 2   LTKTNDSRLIDRSSGFDQRTGIYHSLRPSLSLPPIDQPLSAAEFALSLLLKSSPPATAGK 61

Query: 54  TTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHY-SLSKNDVAFILSPSSFEIPVLY 112
              A  +L+N+++G  LTY E LR+  SL +SL++ + SL+  +VAFILSPSS +IPVLY
Sbjct: 62  NIEALTYLVNSSSGDNLTYGELLRRVRSLAVSLRERFPSLASRNVAFILSPSSLDIPVLY 121

Query: 113 FSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPN---IRTVLVDSPE 169
            +L+S+GVVVSPANP+GS SE+SHQ+ +S+P IAFATS+T  KL  +   + TVL+DS E
Sbjct: 122 LALMSIGVVVSPANPIGSESEVSHQVEVSEPVIAFATSQTVKKLQSSSLPLGTVLMDSTE 181

Query: 170 FLSLLSTQNQNDVVISPPAV-VNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHV 228
           FLS L+  + + V  +P  V VNQSD A +L+SSGTTG+VKGVLLTHRN+I+  A  H  
Sbjct: 182 FLSWLNRSDSSSV--NPFQVQVNQSDPAAILFSSGTTGRVKGVLLTHRNLIASTAVSHQR 239

Query: 229 EYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYK 288
                  +P     V L +LPLFHVFGF+ ++R +++ ET V + RF+ E M K V+KYK
Sbjct: 240 TL----QDPVNYDRVGLFSLPLFHVFGFMMMIRAISLGETLVLLGRFELEAMFKAVEKYK 295

Query: 289 LTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYG 348
           +T MPVSPPL+VAL KSELTKKYDL SL+ L CGGAPLGK++ ++FK+KFP V+I+QGYG
Sbjct: 296 VTGMPVSPPLIVALVKSELTKKYDLRSLRSLGCGGAPLGKDIAERFKQKFPDVDIVQGYG 355

Query: 349 LTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMK 408
           LTE  G A+S    EE  ++GSVGR+ E MEAK+VDP TG++L P + GELWLRGP IMK
Sbjct: 356 LTESSGPAASTFGPEEMVKYGSVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMK 415

Query: 409 GYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQ 468
           GY+G+ KA+ ETVD EGWLKTGDLCYFDS  FL+IVDRLKELIKYKAYQ+PP ELE +L 
Sbjct: 416 GYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILH 475

Query: 469 SNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVN 528
           SNP++ DAAV+P+PDE+AG+IPMAF+VRKPGS++NEAQ++DF+AKQV PYKK+RRVAF+N
Sbjct: 476 SNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFIN 535

Query: 529 SIPKSEAGKILRRELVNHALSGNLSKL 555
           +IPK+ AGKILRREL   A+ GN SKL
Sbjct: 536 AIPKNPAGKILRRELTKIAVDGNASKL 562
Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors. Converts 12-oxo-phytodienoic acid (OPDA) into OPDA-CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q8RU95|4CLL6_ORYSJ 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica GN=4CLL6 PE=2 SV=2 Back     alignment and function description
>sp|Q7F1X5|4CLL5_ORYSJ 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1 Back     alignment and function description
>sp|Q84P21|4CLL5_ARATH 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2 Back     alignment and function description
>sp|Q69RG7|4CLL7_ORYSJ 4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1 Back     alignment and function description
>sp|Q3E6Y4|4CLL3_ARATH 4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2 Back     alignment and function description
>sp|P0C5B6|4CLL4_ARATH 4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1 Back     alignment and function description
>sp|Q84P25|4CLL2_ARATH 4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2 Back     alignment and function description
>sp|Q84P26|4CLL8_ARATH 4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2 Back     alignment and function description
>sp|Q10S72|4CLL4_ORYSJ 4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query555
255540313549 AMP dependent CoA ligase, putative [Rici 0.985 0.996 0.673 0.0
359491536 851 PREDICTED: 4-coumarate--CoA ligase-like 0.967 0.631 0.672 0.0
147768422562 hypothetical protein VITISV_007923 [Viti 0.963 0.951 0.641 0.0
356508790580 PREDICTED: 4-coumarate--CoA ligase-like 0.983 0.941 0.663 0.0
357463591562 4-coumarate-coa ligase [Medicago truncat 0.992 0.980 0.641 0.0
297734380523 unnamed protein product [Vitis vinifera] 0.929 0.986 0.646 0.0
356518901597 PREDICTED: 4-coumarate--CoA ligase-like 0.971 0.902 0.649 0.0
357463593560 4-coumarate-coa ligase [Medicago truncat 0.992 0.983 0.636 0.0
224121930550 acyl:coa ligase [Populus trichocarpa] gi 0.978 0.987 0.653 0.0
224121926548 4-coumarate-coa ligase [Populus trichoca 0.978 0.990 0.653 0.0
>gi|255540313|ref|XP_002511221.1| AMP dependent CoA ligase, putative [Ricinus communis] gi|223550336|gb|EEF51823.1| AMP dependent CoA ligase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/557 (67%), Positives = 448/557 (80%), Gaps = 10/557 (1%)

Query: 1   MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKS-ATTTAAP 59
           MA   SN  IDPN+GFC +TKTFHS+RP  PLPPS QPLS+ Q+ +S+L+ + A  TA  
Sbjct: 1   MATVTSN--IDPNNGFCKETKTFHSLRPSTPLPPSDQPLSIAQYAVSLLNSTTANLTATT 58

Query: 60  FLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLG 119
           FL+++ T   LT+ +FL +T SL+ SL+ H+SLS NDVAFIL P+S  +P+LYFSLLSLG
Sbjct: 59  FLIDSNTAESLTFSQFLNRTRSLSFSLKTHFSLSPNDVAFILCPASLHVPLLYFSLLSLG 118

Query: 120 VVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLP-PNIRTVLVDSPEFLSLLSTQN 178
           + +SPANPL S SE++HQ  LS+P IAFATS+T+HK+P P   T+L+DSPEFLS L   N
Sbjct: 119 LTISPANPLSSNSEVAHQTQLSQPKIAFATSQTAHKIPSPPSGTILIDSPEFLSFLHNSN 178

Query: 179 QNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQ 238
               V      VNQSD A +LYSSGTTGKVKGV LTHRNII+L++ F+H +   +P EP+
Sbjct: 179 TATYV-----SVNQSDPAAILYSSGTTGKVKGVSLTHRNIIALISGFYHNKGQTDPNEPE 233

Query: 239 PSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPL 298
           P   VSL TLPLFHVFGF  LVR  A+ ET V MERFDFE ML+ V+KYK+  MPVSPPL
Sbjct: 234 PE-PVSLFTLPLFHVFGFFMLVRAFAMGETVVLMERFDFEGMLRAVEKYKVAFMPVSPPL 292

Query: 299 VVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASS 358
           +VAL KS+LTKKYDLSSL +L CGGAPLGK+V+D+FK+KFP VEI QGYGLTE GG A+ 
Sbjct: 293 IVALVKSDLTKKYDLSSLLFLGCGGAPLGKDVSDRFKDKFPQVEISQGYGLTETGGGAAR 352

Query: 359 MRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATI 418
           M   EE K+HGSVGRL E MEAK+VDPV G+AL P Q+GELWLRGPT+MKGY+ + KAT 
Sbjct: 353 MISPEEFKQHGSVGRLAENMEAKIVDPVNGEALPPGQRGELWLRGPTLMKGYVKNEKATA 412

Query: 419 ETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAV 478
           ET+DSEGWLKTGD+CYFDS GFL+IVDRLKELIKYKAYQ+PPAELE LL S+ EIADAAV
Sbjct: 413 ETLDSEGWLKTGDICYFDSQGFLYIVDRLKELIKYKAYQVPPAELEQLLHSHLEIADAAV 472

Query: 479 IPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKI 538
           +PY DEEAGQIPMA++VRKPGS I EA++MDFIAKQVAPYKKIRRVAF+N+IPKS AGKI
Sbjct: 473 VPYADEEAGQIPMAYIVRKPGSDITEAEVMDFIAKQVAPYKKIRRVAFINAIPKSPAGKI 532

Query: 539 LRRELVNHALSGNLSKL 555
           LRRELV+ A+S + SKL
Sbjct: 533 LRRELVDLAISDHSSKL 549

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359491536|ref|XP_002279522.2| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147768422|emb|CAN75661.1| hypothetical protein VITISV_007923 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356508790|ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max] Back     alignment and taxonomy information
>gi|357463591|ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula] gi|355491125|gb|AES72328.1| 4-coumarate-coa ligase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297734380|emb|CBI15627.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356518901|ref|XP_003528115.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max] Back     alignment and taxonomy information
>gi|357463593|ref|XP_003602078.1| 4-coumarate-coa ligase [Medicago truncatula] gi|355491126|gb|AES72329.1| 4-coumarate-coa ligase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224121930|ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222859381|gb|EEE96928.1| acyl:coa ligase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224121926|ref|XP_002318707.1| 4-coumarate-coa ligase [Populus trichocarpa] gi|222859380|gb|EEE96927.1| 4-coumarate-coa ligase [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query555
TAIR|locus:2158559562 AT5G63380 [Arabidopsis thalian 0.983 0.971 0.599 1.4e-176
TAIR|locus:2034392546 OPCL1 "OPC-8:0 CoA ligase1" [A 0.956 0.972 0.456 7.6e-128
TAIR|locus:2034403550 AT1G20500 [Arabidopsis thalian 0.963 0.972 0.457 6.3e-124
TAIR|locus:2176662550 4CL8 [Arabidopsis thaliana (ta 0.960 0.969 0.457 2e-120
TAIR|locus:2034423565 AT1G20480 [Arabidopsis thalian 0.933 0.916 0.457 5.2e-120
TAIR|locus:2115673544 AT4G05160 [Arabidopsis thalian 0.938 0.957 0.409 1.4e-101
TAIR|locus:2117209566 AT4G19010 [Arabidopsis thalian 0.954 0.936 0.378 8.4e-97
TAIR|locus:2094716556 4CL2 "4-coumarate:CoA ligase 2 0.929 0.928 0.390 5.9e-89
TAIR|locus:2017602561 4CL1 "4-coumarate:CoA ligase 1 0.917 0.907 0.377 5.4e-86
TAIR|locus:2015003561 4CL3 "4-coumarate:CoA ligase 3 0.920 0.910 0.378 3.1e-83
TAIR|locus:2158559 AT5G63380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1715 (608.8 bits), Expect = 1.4e-176, P = 1.4e-176
 Identities = 338/564 (59%), Positives = 432/564 (76%)

Query:     4 TNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKS---ATT----T 56
             TN + LID +SGF  +T  +HS+RP + LPP  QPLS  +F LS+L KS   AT      
Sbjct:     5 TNDSRLIDRSSGFDQRTGIYHSLRPSLSLPPIDQPLSAAEFALSLLLKSSPPATAGKNIE 64

Query:    57 AAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHY-SLSKNDVAFILSPSSFEIPVLYFSL 115
             A  +L+N+++G  LTY E LR+  SL +SL++ + SL+  +VAFILSPSS +IPVLY +L
Sbjct:    65 ALTYLVNSSSGDNLTYGELLRRVRSLAVSLRERFPSLASRNVAFILSPSSLDIPVLYLAL 124

Query:   116 LSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPN---IRTVLVDSPEFLS 172
             +S+GVVVSPANP+GS SE+SHQ+ +S+P IAFATS+T  KL  +   + TVL+DS EFLS
Sbjct:   125 MSIGVVVSPANPIGSESEVSHQVEVSEPVIAFATSQTVKKLQSSSLPLGTVLMDSTEFLS 184

Query:   173 LLSTQNQNDVVISPPAV-VNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYG 231
              L+  + + V  +P  V VNQSD A +L+SSGTTG+VKGVLLTHRN+I+  A  H     
Sbjct:   185 WLNRSDSSSV--NPFQVQVNQSDPAAILFSSGTTGRVKGVLLTHRNLIASTAVSHQ---- 238

Query:   232 ANPAEPQPSGEVSLITLPLFHVFGFLALVRVVAVSETAVFMERFDFETMLKTVDKYKLTS 291
                 +P     V L +LPLFHVFGF+ ++R +++ ET V + RF+ E M K V+KYK+T 
Sbjct:   239 RTLQDPVNYDRVGLFSLPLFHVFGFMMMIRAISLGETLVLLGRFELEAMFKAVEKYKVTG 298

Query:   292 MPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTE 351
             MPVSPPL+VAL KSELTKKYDL SL+ L CGGAPLGK++ ++FK+KFP V+I+QGYGLTE
Sbjct:   299 MPVSPPLIVALVKSELTKKYDLRSLRSLGCGGAPLGKDIAERFKQKFPDVDIVQGYGLTE 358

Query:   352 CGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYI 411
               G A+S    EE  ++GSVGR+ E MEAK+VDP TG++L P + GELWLRGP IMKGY+
Sbjct:   359 SSGPAASTFGPEEMVKYGSVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYV 418

Query:   412 GDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNP 471
             G+ KA+ ETVD EGWLKTGDLCYFDS  FL+IVDRLKELIKYKAYQ+PP ELE +L SNP
Sbjct:   419 GNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNP 478

Query:   472 EIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIP 531
             ++ DAAV+P+PDE+AG+IPMAF+VRKPGS++NEAQ++DF+AKQV PYKK+RRVAF+N+IP
Sbjct:   479 DVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIP 538

Query:   532 KSEAGKILRRELVNHALSGNLSKL 555
             K+ AGKILRREL   A+ GN SKL
Sbjct:   539 KNPAGKILRRELTKIAVDGNASKL 562
GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0016207 "4-coumarate-CoA ligase activity" evidence=ISS
GO:0004321 "fatty-acyl-CoA synthase activity" evidence=IDA
GO:0005777 "peroxisome" evidence=IDA
GO:0009695 "jasmonic acid biosynthetic process" evidence=IDA
GO:0009850 "auxin metabolic process" evidence=IDA
GO:0009851 "auxin biosynthetic process" evidence=IDA
TAIR|locus:2034392 OPCL1 "OPC-8:0 CoA ligase1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034403 AT1G20500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176662 4CL8 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034423 AT1G20480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115673 AT4G05160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117209 AT4G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094716 4CL2 "4-coumarate:CoA ligase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017602 4CL1 "4-coumarate:CoA ligase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2015003 4CL3 "4-coumarate:CoA ligase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7F1X54CLL5_ORYSJ6, ., 2, ., 1, ., -0.51080.94050.9630yesno
Q8RU954CLL6_ORYSJ6, ., 2, ., 1, ., -0.49900.96750.8979yesno
Q84P234CLL9_ARATH6, ., 2, ., 1, ., -0.59250.98910.9768yesno
O07610LCFB_BACSU6, ., 2, ., 1, ., 30.31620.80900.8752yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.766
4th Layer6.2.1.12LOW CONFIDENCE prediction!
3rd Layer1.13.12.70.824
3rd Layer1.13.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 0.0
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 1e-168
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 1e-157
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 1e-146
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 1e-128
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 1e-117
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 1e-114
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 1e-107
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 1e-100
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 1e-100
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 3e-98
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 4e-96
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 5e-94
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 2e-93
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 6e-83
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 1e-81
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 4e-78
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 5e-78
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 1e-73
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 1e-73
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 1e-70
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 3e-69
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 6e-69
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 2e-67
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 5e-67
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 7e-67
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 1e-65
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 8e-65
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 1e-64
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 2e-64
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 5e-64
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 2e-62
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 3e-62
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 1e-60
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 6e-60
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 7e-60
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 1e-59
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 6e-59
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 2e-58
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 6e-58
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 3e-55
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 7e-55
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 3e-54
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 1e-53
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 1e-53
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 2e-53
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 5e-53
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 1e-52
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 1e-52
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 2e-52
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 4e-52
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 8e-52
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 2e-51
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 5e-51
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 1e-50
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 7e-50
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 2e-49
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 6e-49
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 2e-48
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 1e-47
PRK13382537 PRK13382, PRK13382, acyl-CoA synthetase; Provision 2e-46
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 9e-46
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 1e-45
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 4e-45
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 2e-44
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 4e-44
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 1e-43
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 2e-43
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 3e-43
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 3e-43
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 8e-43
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 6e-42
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 1e-41
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 3e-41
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 3e-41
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 1e-39
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 3e-39
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 5e-39
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 1e-38
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 2e-38
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 8e-38
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 9e-38
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 5e-37
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 4e-36
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 4e-36
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 6e-36
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 7e-36
PRK13383516 PRK13383, PRK13383, acyl-CoA synthetase; Provision 1e-35
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 2e-35
cd05924365 cd05924, FACL_like_5, Uncharacterized subfamily of 4e-35
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 9e-35
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 9e-35
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 1e-34
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 1e-34
PRK10524629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 4e-34
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 4e-34
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 5e-33
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 1e-32
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 7e-32
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 3e-31
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 3e-31
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 1e-30
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 4e-30
PRK13390501 PRK13390, PRK13390, acyl-CoA synthetase; Provision 2e-29
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 6e-29
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 2e-28
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 2e-28
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 2e-27
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 3e-27
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 3e-27
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 6e-27
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 5e-26
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 2e-25
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 5e-25
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 7e-25
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 9e-25
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 9e-25
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 2e-24
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 3e-24
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 6e-24
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 9e-24
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 1e-23
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 1e-23
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 1e-23
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 3e-23
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 8e-23
PRK07824358 PRK07824, PRK07824, O-succinylbenzoic acid--CoA li 3e-22
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 5e-21
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 7e-21
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 1e-20
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 1e-20
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 3e-20
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 4e-20
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 4e-20
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 8e-20
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 9e-20
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 3e-19
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 8e-19
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 1e-18
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 4e-18
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 6e-18
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 7e-18
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 1e-17
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 4e-17
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 1e-16
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 3e-16
PRK07445452 PRK07445, PRK07445, O-succinylbenzoic acid--CoA li 2e-15
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 3e-15
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 4e-15
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 2e-14
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 2e-13
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 3e-13
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 5e-13
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 2e-12
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 2e-12
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 2e-12
PRK08308414 PRK08308, PRK08308, acyl-CoA synthetase; Validated 3e-12
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 4e-12
PRK123165163 PRK12316, PRK12316, peptide synthase; Provisional 1e-11
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 1e-11
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 1e-11
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 2e-11
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 3e-11
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 3e-10
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 4e-10
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 1e-09
PRK12476612 PRK12476, PRK12476, putative fatty-acid--CoA ligas 1e-09
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 6e-09
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 6e-08
pfam1319343 pfam13193, DUF4009, Domain of unknown function (DU 5e-06
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 2e-05
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 4e-05
cd05905556 cd05905, Dip2, Disco-interacting protein 2 (Dip2) 5e-05
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 4e-04
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 8e-04
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information 
 Score =  672 bits (1735), Expect = 0.0
 Identities = 251/515 (48%), Positives = 331/515 (64%), Gaps = 15/515 (2%)

Query: 33  PPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSL 92
            P    L       +           P L++AATGR LTY E  R    L   L      
Sbjct: 1   IPKDLSLDSASLLFASEF-----GDRPALIDAATGRALTYAELERLVRRLAAGL-AARGG 54

Query: 93  SKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRT 152
            K DV  +LSP+S E PV++ ++LS G VV+ ANPL + +EI+ Q+  S   +A  TS  
Sbjct: 55  RKGDVVLLLSPNSLEFPVVFLAVLSAGAVVTTANPLYTPAEIAKQVKDSGAKLAITTSEL 114

Query: 153 SHKLPP--NIRTVLVDSPEFLSLLSTQNQNDVVISPPAV-VNQSDAAVLLYSSGTTGKVK 209
           + KL        VL+DS +  S             PP V + Q D A L YSSGTTG+ K
Sbjct: 115 AEKLASLALEPVVLLDSADDGSAAIDDLLFADEPEPPVVVIKQDDVAALPYSSGTTGRSK 174

Query: 210 GVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVR-VVAVSET 268
           GV+LTHRN+I+ VA     E            +V+L  LP+FH++G   ++  ++ +  T
Sbjct: 175 GVMLTHRNLIANVAQLVAGE-----GPNFDREDVTLCVLPMFHIYGLTVILLALLRLGAT 229

Query: 269 AVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGK 328
            V M RFD E  L  ++KYK+T +PV PP+V+AL K  +  KYDLSSL+ +  G APLGK
Sbjct: 230 VVVMPRFDLEKFLAAIEKYKVTHLPVVPPIVLALVKHPIVDKYDLSSLKQIGSGAAPLGK 289

Query: 329 EVTDKFKEKFPSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTG 388
           E+ + F+ +FP VE+ QGYG+TE   + +     E+  + GSVGRL   +EAK+VDP TG
Sbjct: 290 ELAEAFRARFPGVELGQGYGMTESSPVTTMCPVPEKDPKPGSVGRLVPNVEAKIVDPETG 349

Query: 389 DALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLK 448
           ++L P Q GELW+RGP +MKGY+ + +AT ET+D +GWL TGDL YFD +G+LFIVDRLK
Sbjct: 350 ESLPPNQPGELWVRGPQVMKGYLNNPEATAETIDKDGWLHTGDLGYFDEDGYLFIVDRLK 409

Query: 449 ELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLM 508
           ELIKYK +Q+ PAELE LL S+PEIADAAVIPYPDEEAG+IPMAFVVR+PGS ++E ++M
Sbjct: 410 ELIKYKGFQVAPAELEALLLSHPEIADAAVIPYPDEEAGEIPMAFVVRQPGSELSEDEVM 469

Query: 509 DFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRREL 543
            F+AKQVAPYKK+R+V FV++IPKS +GKILRREL
Sbjct: 470 QFVAKQVAPYKKVRKVVFVDAIPKSPSGKILRREL 504

4-Coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids. Length = 504
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|221971 pfam13193, DUF4009, Domain of unknown function (DUF4009) Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 555
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PLN02654666 acetate-CoA ligase 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK09274552 peptide synthase; Provisional 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK056914334 peptide synthase; Validated 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 100.0
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 100.0
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.97
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.93
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.87
PRK09188365 serine/threonine protein kinase; Provisional 99.86
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.79
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 99.37
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 99.3
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.81
PLN02249597 indole-3-acetic acid-amido synthetase 98.45
PLN02247606 indole-3-acetic acid-amido synthetase 98.31
PLN02620612 indole-3-acetic acid-amido synthetase 98.25
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 97.85
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 94.35
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 86.55
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 84.02
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.6e-81  Score=632.15  Aligned_cols=484  Identities=40%  Similarity=0.658  Sum_probs=423.6

Q ss_pred             cEEEECC-CCceecHHHHHHHHHHHHHHHHhhcC--CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 008749           59 PFLMNAA-TGRRLTYPEFLRQTNSLTLSLQKHYS--LSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEIS  135 (555)
Q Consensus        59 ~a~~~~~-~~~~~Ty~el~~~v~~la~~L~~~~g--~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~v~~~~~~~~l~  135 (555)
                      +.++... .++.+||+|++.++.++|..|.+ +|  +++||+|++++||+++++.+++||+.+|+++.+++|.+.+.++.
T Consensus        34 ~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~-~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~  112 (537)
T KOG1176|consen   34 TSLVYQDSDGRELTYSELHDRCRRLASALSE-LGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIA  112 (537)
T ss_pred             ceEEEecCCCcEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHH
Confidence            5666542 25899999999999999999997 66  89999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCeEEEEcCCccccCCC-----CCeEEEeCCc----hhHHhhhccC------CCCcccCCCCcCCCCCEEEEEc
Q 008749          136 HQLHLSKPSIAFATSRTSHKLPP-----NIRTVLVDSP----EFLSLLSTQN------QNDVVISPPAVVNQSDAAVLLY  200 (555)
Q Consensus       136 ~~l~~~~~~~ii~~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~~~~~~~a~i~~  200 (555)
                      .+++.+++++++++....+++.+     ...++++...    ..........      ....... ......+|++.++|
T Consensus       113 ~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dd~~~il~  191 (537)
T KOG1176|consen  113 KQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDG-IRPVSEDDTAAILY  191 (537)
T ss_pred             HHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcc-cccCCCCCeEEEec
Confidence            99999999999999887766532     1344444432    1111111000      0000011 34566799999999


Q ss_pred             CCCCCCccceeeechHHHHHHHHHHhhhhcCCCCCCCCCCCCEEEEecChhHHHHHHHHHHHH-HcCCeEEEeCCCCHHH
Q 008749          201 SSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRVV-AVSETAVFMERFDFET  279 (555)
Q Consensus       201 TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l-~~g~~~v~~~~~~~~~  279 (555)
                      ||||||.||||++||+++..+...........       ..++.++.+|++|.+|+..++.++ ..|++++....++++.
T Consensus       192 SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~-------~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~  264 (537)
T KOG1176|consen  192 SSGTTGLPKGVVLSHRNLIANTLSIKIGWELT-------SDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAEL  264 (537)
T ss_pred             CCCCCCCCceEEEecHHHHHHHHHhhhcccCC-------CCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHH
Confidence            99999999999999999988876554444322       579999999999999997777755 5555555566789999


Q ss_pred             HHHHHhhcCCceEecchHHHHHHHhCcccCCCCCCCceEEEEccCCCCHHHHHHHHHHCCCCcEEcccCccccccccccC
Q 008749          280 MLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGYGLTECGGLASSM  359 (555)
Q Consensus       280 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~  359 (555)
                      +++.+++|++|+++++|.++..|++.+.....+++++|.+.+||+++++++.+++.+.+|...+...||+||+++.++.+
T Consensus       265 ~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~  344 (537)
T KOG1176|consen  265 FLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSN  344 (537)
T ss_pred             HHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeec
Confidence            99999999999999999999999999877778899999999999999999999999999779999999999999777776


Q ss_pred             CCCcccCCCCCcccccCCcEEEEEcCCCCcccCCCCccEEEEeCCcccccccCCchhhhcccCCCCeeecCceEEEecCC
Q 008749          360 RDSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNG  439 (555)
Q Consensus       360 ~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g  439 (555)
                      ...+. ..++++|+++++...++.+ +.|+.+++++.||||++|+.++.||+++|+.|.+.|+.+|||+|||+|+.|+||
T Consensus       345 ~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG  422 (537)
T KOG1176|consen  345 DWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDG  422 (537)
T ss_pred             CCCcc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCC
Confidence            65554 5789999999988888888 999999999999999999999999999999999999878999999999999999


Q ss_pred             cEEEEcccCCeeeeCCeeeChHHHHHHHhcCCCcceEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Q 008749          440 FLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYK  519 (555)
Q Consensus       440 ~l~~~GR~~d~i~~~G~~i~~~~Ie~~l~~~~~i~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~l~~~l~~~l~~~~  519 (555)
                      ++++.+|++|+||.+|++|+|.|||++|.+||.|.||+|++++++..|+.++|+|+.+++...++++|+++++++|+.|+
T Consensus       423 ~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~y~  502 (537)
T KOG1176|consen  423 YLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPAYK  502 (537)
T ss_pred             eEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCChhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceEEEccccCCCCCCcccHHHHHHHHhcCCCC
Q 008749          520 KIRRVAFVNSIPKSEAGKILRRELVNHALSGNLS  553 (555)
Q Consensus       520 ~p~~~~~~~~lP~t~~GKv~r~~l~~~~~~~~~~  553 (555)
                      +|..++|+++||+|++||+.|+.|++.+.+...+
T Consensus       503 ~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~~~  536 (537)
T KOG1176|consen  503 LPGGVVFVDELPKTPNGKILRRKLRDIAKKLGSK  536 (537)
T ss_pred             ccCeEEEeccCCCCCcchHHHHHHHHHHHhcccC
Confidence            9999999999999999999999999999876543

>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 2e-87
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 1e-86
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 2e-82
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 2e-82
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 5e-82
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 2e-78
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 2e-75
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 2e-75
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 3e-75
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 4e-74
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 6e-43
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 3e-42
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 3e-40
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 6e-36
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 4e-33
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 4e-30
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 7e-30
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 2e-29
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 6e-27
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 1e-26
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 6e-26
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 6e-26
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 2e-25
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 3e-25
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 3e-25
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 3e-25
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 1e-24
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 1e-24
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 1e-24
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 7e-24
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 1e-23
3pbk_A583 Structural And Functional Studies Of Fatty Acyl-Ade 1e-22
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 1e-21
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 2e-21
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 2e-21
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 4e-21
3l8c_A521 Structure Of Probable D-Alanine--Poly(Phosphoribito 4e-21
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 5e-21
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 1e-20
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 2e-20
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 2e-20
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 2e-20
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 7e-20
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 1e-19
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 6e-19
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 6e-17
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 6e-17
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 4e-16
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 7e-15
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 4e-14
3e7w_A511 Crystal Structure Of Dlta: Implications For The Rea 9e-14
3kxw_A590 The Crystal Structure Of Fatty Acid Amp Ligase From 1e-12
3vnq_A544 Co-crystal Structure Of Nrps Adenylation Protein Cy 1e-11
3ite_A562 The Third Adenylation Domain Of The Fungal Sidn Non 7e-10
4dg8_A 620 Structure Of Pa1221, An Nrps Protein Containing Ade 8e-05
4gr4_A469 Crystal Structure Of Slgn1deltaasub Length = 469 3e-04
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure 
Iteration: 1

 Score =  320 bits (819), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/506 (38%), Positives = 296/506 (58%), Gaps = 14/506 (2%)
Query: 48  ILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFE 107
           +L   +  ++ P L+N A G   TY +       +   L K   + + DV  +  PSS E
Sbjct: 28  VLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNK-IGIQQGDVIMLFLPSSPE 86
Query: 108 IPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPP-----NIRT 162
             + +      G +++ ANP  + +E++     S+  +    +    K+       +++ 
Sbjct: 87  FVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKV 146
Query: 163 VLVDS-PEFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISL 221
           + VDS P+     S   Q D   +P   ++  D   L YSSGTTG  KGV+LTH+ +I+ 
Sbjct: 147 MCVDSAPDGCLHFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITS 206
Query: 222 VASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGFLALVRV-VAVSETAVFMERFDFETM 280
           VA    V+ G NP     S +V L  LP+FH++   +++   + V    + M +F+  ++
Sbjct: 207 VA--QQVD-GDNPNLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSL 263
Query: 281 LKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPS 340
           L  ++KYK++  PV PP+++++ KS    K+DLSSL+ +  GGAPLGKE+ D  + KFP 
Sbjct: 264 LGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFPQ 323
Query: 341 VEIIQGYGLTECGG-LASSMRDSEE--TKRHGSVGRLHELMEAKVVDPVTGDALSPAQKG 397
             + QGYG+TE G  LA  +  ++E    + G+ G +    E K+VDP TG +L   Q G
Sbjct: 324 ARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPG 383
Query: 398 ELWLRGPTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQ 457
           E+ +RG  IMKGY+ D +AT  T+D EGWL TGD+ Y D +  LFIVDRLKELIKYK +Q
Sbjct: 384 EICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQ 443
Query: 458 IPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAP 517
           + PAELE LL ++PEI+DAAV+   DE+AG++P+AFVV+   S   E ++  +I+KQV  
Sbjct: 444 VAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEIKQYISKQVIF 503
Query: 518 YKKIRRVAFVNSIPKSEAGKILRREL 543
           YK+I+RV F+ +IPK+ +GKILR+ L
Sbjct: 504 YKRIKRVFFIEAIPKAPSGKILRKNL 529
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|3PBK|A Chain A, Structural And Functional Studies Of Fatty Acyl-Adenylate Ligases From E. Coli And L. Pneumophila Length = 583 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|3L8C|A Chain A, Structure Of Probable D-Alanine--Poly(Phosphoribitol) Ligase Subunit-1 From Streptococcus Pyogenes Length = 521 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps) Adenylation Domains Length = 511 Back     alignment and structure
>pdb|3KXW|A Chain A, The Crystal Structure Of Fatty Acid Amp Ligase From Legionella Pneumophila Length = 590 Back     alignment and structure
>pdb|3VNQ|A Chain A, Co-crystal Structure Of Nrps Adenylation Protein Cytc1 With Atp From Streptomyces Length = 544 Back     alignment and structure
>pdb|3ITE|A Chain A, The Third Adenylation Domain Of The Fungal Sidn Non- Ribosomal Peptide Synthetase Length = 562 Back     alignment and structure
>pdb|4DG8|A Chain A, Structure Of Pa1221, An Nrps Protein Containing Adenylation And Pcp Domains Length = 620 Back     alignment and structure
>pdb|4GR4|A Chain A, Crystal Structure Of Slgn1deltaasub Length = 469 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 0.0
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 0.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 0.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 0.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 0.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-135
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 1e-130
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 1e-125
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 1e-125
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 1e-124
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 1e-123
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-122
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 1e-121
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-119
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 1e-116
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 8e-82
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 2e-73
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 6e-73
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 1e-61
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 8e-57
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 7e-51
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 1e-27
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 6e-26
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 1e-24
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 4e-23
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 1e-22
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 4e-21
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 7e-21
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 7e-19
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 7e-19
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 9e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 4e-09
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 9e-09
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 1e-08
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
 Score =  676 bits (1747), Expect = 0.0
 Identities = 193/562 (34%), Positives = 301/562 (53%), Gaps = 28/562 (4%)

Query: 3   GTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLM 62
               + +++  S   +    F S  P I +P     LS+  +    + + AT      L+
Sbjct: 28  EQAVSQVMEKQSNNNNSDVIFRSKLPDIYIPNH---LSLHDYIFQNISEFATKPC---LI 81

Query: 63  NAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVV 122
           N  TG   TY +    +  +  +  K   +++NDV  +L P+  E  + + +    G   
Sbjct: 82  NGPTGHVYTYSDVHVISRQIAANFHK-LGVNQNDVVMLLLPNCPEFVLSFLAASFRGATA 140

Query: 123 SPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPP-----NIRTVLVDSPEFLSL---- 173
           + ANP  + +EI+ Q   S   +    +R   K+ P      +  V +D  E + +    
Sbjct: 141 TAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGC 200

Query: 174 -----LSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHV 228
                L+        +     ++  D   L YSSGTTG  KGV+LTH+ +++ VA     
Sbjct: 201 LRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDG 260

Query: 229 EYGANPAEPQPSGEVSLITLPLFHVFGFLALV-RVVAVSETAVFMERFDFETMLKTVDKY 287
           E   NP     S +V L  LP+FH++   +++   + V    + M +F+   +L+ + + 
Sbjct: 261 E---NPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRC 317

Query: 288 KLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPLGKEVTDKFKEKFPSVEIIQGY 347
           K+T  P+ PP+V+A+ KS  T+KYDLSS++ +  G APLGKE+ D    KFP+ ++ QGY
Sbjct: 318 KVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGY 377

Query: 348 GLTECGGLASSMR---DSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRGP 404
           G+TE G + +            + G+ G +    E K+VDP TGD+LS  Q GE+ +RG 
Sbjct: 378 GMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGH 437

Query: 405 TIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELE 464
            IMKGY+ +  AT ET+D +GWL TGD+   D +  LFIVDRLKELIKYK +Q+ PAELE
Sbjct: 438 QIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELE 497

Query: 465 HLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRV 524
            LL  +P+I D AV+   +E AG++P+AFVV+   S ++E  +  F++KQV  YK+I +V
Sbjct: 498 ALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFYKRINKV 557

Query: 525 AFVNSIPKSEAGKILRRELVNH 546
            F  SIPK+ +GKILR++L   
Sbjct: 558 FFTESIPKAPSGKILRKDLRAK 579
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Length = 436 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Length = 437 Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Length = 443 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query555
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.98
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.55
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.55
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 99.03
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 98.99
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.98
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 91.22
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 90.94
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 87.8
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
Probab=100.00  E-value=5.7e-85  Score=686.97  Aligned_cols=518  Identities=37%  Similarity=0.628  Sum_probs=453.0

Q ss_pred             CCCceeecCCCCCCCCCCCCCCCHHHHhhcccccCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHHHhhcCCCCCCE
Q 008749           18 SQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDV   97 (555)
Q Consensus        18 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~~~~Ty~el~~~v~~la~~L~~~~g~~~gd~   97 (555)
                      .+..+|.+..++.++|.   .+|+.++|.++++++|+   ++|+++...++++||+||.++++++|+.|.+ .|+++||+
T Consensus         4 ~~~~i~~~~~~~~~~p~---~~~l~~~l~~~a~~~p~---~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd~   76 (536)
T 3ni2_A            4 QEEFIFRSKLPDIYIPK---NLPLHSYVLENLSNHSS---KPCLINGANGDVYTYADVELTARRVASGLNK-IGIQQGDV   76 (536)
T ss_dssp             -CCCCBCCSSCCCCCCS---SCCHHHHHTTTGGGSTT---SEEEEETTTCCEEEHHHHHHHHHHHHHHHHH-TTCCTTCE
T ss_pred             ccceEEecCCCCCCCCC---CCcHHHHHHHHhhcCCC---ceEEEECCCCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCE
Confidence            34567777777777765   38999999999999999   9999997667899999999999999999998 89999999


Q ss_pred             EEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcCCccccCCC-----CCeEEEeCCc----
Q 008749           98 AFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPP-----NIRTVLVDSP----  168 (555)
Q Consensus        98 V~l~~~~~~~~~~~~lA~~~~G~~~v~v~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-----~~~~~~~~~~----  168 (555)
                      |+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|++....+.+..     ....+.++..    
T Consensus        77 V~i~~~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (536)
T 3ni2_A           77 IMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGC  156 (536)
T ss_dssp             EEEECCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCCCTTC
T ss_pred             EEEEcCCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCCCCCc
Confidence            9999999999999999999999999999999999999999999999999998765443321     3345555431    


Q ss_pred             -hhHHhhhccCCCCcccCCCCcCCCCCEEEEEcCCCCCCccceeeechHHHHHHHHHHhhhhcCCCCCCCCCCCCEEEEe
Q 008749          169 -EFLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGEVSLIT  247 (555)
Q Consensus       169 -~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (555)
                       .+.++......    ..+.....++++++|+|||||||.||+|+++|+++.+.+.........   .....+++++++.
T Consensus       157 ~~~~~~~~~~~~----~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~---~~~~~~~d~~l~~  229 (536)
T 3ni2_A          157 LHFSELTQADEN----EAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNP---NLYFHSEDVILCV  229 (536)
T ss_dssp             EETHHHHTSCGG----GCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSC---SSCCCTTCCEEEC
T ss_pred             cCHHHHhhcccc----ccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccc---cccCCCCCEEEEe
Confidence             23333332221    223345678999999999999999999999999998887665432110   0001178999999


Q ss_pred             cChhHHHHH-HHHHHHHHcCCeEEEeCCCCHHHHHHHHhhcCCceEecchHHHHHHHhCcccCCCCCCCceEEEEccCCC
Q 008749          248 LPLFHVFGF-LALVRVVAVSETAVFMERFDFETMLKTVDKYKLTSMPVSPPLVVALTKSELTKKYDLSSLQYLSCGGAPL  326 (555)
Q Consensus       248 ~p~~~~~g~-~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G~~l  326 (555)
                      +|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+++
T Consensus       230 ~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l  309 (536)
T 3ni2_A          230 LPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPL  309 (536)
T ss_dssp             SCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCC
T ss_pred             cChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCC
Confidence            999999999 5678999999999999999999999999999999999999999999998877777889999999999999


Q ss_pred             CHHHHHHHHHHCCCCcEEcccCccccccccccCC---CCcccCCCCCcccccCCcEEEEEcCCCCcccCCCCccEEEEeC
Q 008749          327 GKEVTDKFKEKFPSVEIIQGYGLTECGGLASSMR---DSEETKRHGSVGRLHELMEAKVVDPVTGDALSPAQKGELWLRG  403 (555)
Q Consensus       327 ~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~  403 (555)
                      ++++.+++++.||++++++.||+||++.+++.+.   ........+++|+|+++++++|+|++++++++.|+.|||+++|
T Consensus       310 ~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g  389 (536)
T 3ni2_A          310 GKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRG  389 (536)
T ss_dssp             CHHHHHHHHHHCTTSEEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEES
T ss_pred             CHHHHHHHHHHCCCCCccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeC
Confidence            9999999999999999999999999987655432   2223345788999999999999998899999999999999999


Q ss_pred             CcccccccCCchhhhcccCCCCeeecCceEEEecCCcEEEEcccCCeeeeCCeeeChHHHHHHHhcCCCcceEEEEeeeC
Q 008749          404 PTIMKGYIGDNKATIETVDSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPD  483 (555)
Q Consensus       404 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~i~~~~Ie~~l~~~~~i~~~~v~~~~~  483 (555)
                      ++++.||+++++.|.+.|+.++||+|||+|++++||++++.||+||+||++|++|+|.+||++|.++|+|.+++|++.++
T Consensus       390 ~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~  469 (536)
T 3ni2_A          390 DQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKD  469 (536)
T ss_dssp             TTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred             cccchhhcCChhHHHhhccCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHHHHHHHHhCCCcceEEEEeeec
Confidence            99999999999999999988999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCccceEEEccccCCCCCCcccHHHHHHHHhc
Q 008749          484 EEAGQIPMAFVVRKPGSSINEAQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNHALS  549 (555)
Q Consensus       484 ~~~~~~l~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GKv~r~~l~~~~~~  549 (555)
                      +..++.++++|+..++...+.++|+++++++|+.|++|..++++++||+|++||++|++|++++.+
T Consensus       470 ~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~lP~t~~GKi~R~~L~~~~~~  535 (536)
T 3ni2_A          470 EDAGEVPVAFVVKSEKSQATEDEIKQYISKQVIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAG  535 (536)
T ss_dssp             TTTEEEEEEEEEECTTCCCCHHHHHHHHHTTSCGGGCCSEEEECSCCCBCTTSCBCHHHHHTC---
T ss_pred             CCCCceeEEEEEecCCCCCCHHHHHHHHHHhccCCccccEEEEEecCCCCCCCCeeHHHHHHHhcc
Confidence            988999999999998888999999999999999999999999999999999999999999998753
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 555
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 1e-110
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 1e-106
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 9e-98
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 9e-97
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 4e-79
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 2e-74
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 8e-69
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  341 bits (875), Expect = e-110
 Identities = 114/523 (21%), Positives = 205/523 (39%), Gaps = 50/523 (9%)

Query: 63  NAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVV 122
           + +  + ++Y E  R       +L     + K DV  I  P   E  V   +   +G V 
Sbjct: 97  DTSQSKHISYRELHRDVCRFANTLLDL-GIKKGDVVAIYMPMVPEAAVAMLACARIGAVH 155

Query: 123 SPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLP-----------------PNIRTVLV 165
           S      S   ++  +  S   +                              ++  V+V
Sbjct: 156 SVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIV 215

Query: 166 --------DSPEFLSLLSTQNQNDVVIS-PPAVVNQSDAAVLLYSSGTTGKVKGVLLTHR 216
                   D  E   L              P  +N  D   +LY+SG+TGK KGVL T  
Sbjct: 216 LKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTG 275

Query: 217 NIISLVASFHHVEYGANPAEPQPSGEVSLITLPLFHVFGF-LALVRVVAVSETAVFME-- 273
             +   A+     +  +P      G++   T  +  V G    L   +A   T +  E  
Sbjct: 276 GYLVYAATTFKYVFDYHP------GDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGV 329

Query: 274 --RFDFETMLKTVDKYKLTSMPVSPPLVVALTKS--ELTKKYDLSSLQYLSCGGAPLGKE 329
                   M + VDK+++  +  +P  + AL     +  +  D SSL+ L   G P+  E
Sbjct: 330 PNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPE 389

Query: 330 VTDKFKEKF--PSVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVT 387
             + + +K       ++  +  TE GG   +        + GS  R    ++  +VD   
Sbjct: 390 AWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDN-E 448

Query: 388 GDALSPAQKGELWLRG--PTIMKGYIGDNKATIETVDS--EGWLKTGDLCYFDSNGFLFI 443
           G     A +G L +    P   +   GD++   +T  S  +    +GD    D +G+ +I
Sbjct: 449 GHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWI 508

Query: 444 VDRLKELIKYKAYQIPPAELEHLLQSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSIN 503
             R+ +++    +++  AE+E  L ++P+IA+AAV+  P    GQ   A+V    G   +
Sbjct: 509 TGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPS 568

Query: 504 E---AQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRREL 543
               A++ +++ K++ P      + + +S+PK+ +GKI+RR L
Sbjct: 569 PELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRIL 611
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query555
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=1.1e-78  Score=647.77  Aligned_cols=498  Identities=22%  Similarity=0.319  Sum_probs=422.3

Q ss_pred             CCCHHHHhh-cccccCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCCcHHHHH
Q 008749           38 PLSVTQFTL-SILHKSATTTAAPFLMNA----ATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLY  112 (555)
Q Consensus        38 ~~~~~~~~~-~~~~~~p~~~~~~a~~~~----~~~~~~Ty~el~~~v~~la~~L~~~~g~~~gd~V~l~~~~~~~~~~~~  112 (555)
                      .+|+.+.++ ++++++||   ++|++..    +..+++||+||.++|+++|+.|++ +|+++||+|+++++|++++++++
T Consensus        70 ~~N~~~n~ldrh~~~~~d---~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~~-~Gv~~Gd~V~i~~~n~~e~iv~~  145 (643)
T d1pg4a_          70 TLNLAANCLDRHLQENGD---RTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLD-LGIKKGDVVAIYMPMVPEAAVAM  145 (643)
T ss_dssp             EECHHHHHTGGGHHHHTT---SEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHH-HTCCTTCEEEEECCSSHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhCCC---CEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecccchHHHHHH
Confidence            378877554 67788898   9999853    234689999999999999999998 89999999999999999999999


Q ss_pred             HHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcCCccccC-----------------CCCC-eEEEeCCch-----
Q 008749          113 FSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKL-----------------PPNI-RTVLVDSPE-----  169 (555)
Q Consensus       113 lA~~~~G~~~v~v~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~-----------------~~~~-~~~~~~~~~-----  169 (555)
                      |||+++|++++|+++.++.+.+.+++++++++++|+++......                 .... ..+.+....     
T Consensus       146 lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~  225 (643)
T d1pg4a_         146 LACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW  225 (643)
T ss_dssp             HHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC
T ss_pred             HHHHHhCeEEEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCccccc
Confidence            99999999999999999999999999999999999976532211                 0111 233332110     


Q ss_pred             -------hHHhhhccCCCCcccCCCCcCCCCCEEEEEcCCCCCCccceeeechHHHHHHHHHHhhhhcCCCCCCCCCCCC
Q 008749          170 -------FLSLLSTQNQNDVVISPPAVVNQSDAAVLLYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPAEPQPSGE  242 (555)
Q Consensus       170 -------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~  242 (555)
                             ..........    ...+...+++++++|+|||||||.||+|+++|++++..............      ++|
T Consensus       226 ~~~~~~~~~~~~~~~~~----~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~------~~d  295 (643)
T d1pg4a_         226 QEGRDLWWRDLIEKASP----EHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYH------PGD  295 (643)
T ss_dssp             CBTTEEEHHHHHTTSCS----CCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCC------TTC
T ss_pred             ccccchhhhhhhcccCc----ccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCC------CCC
Confidence                   1111111111    23344567899999999999999999999999997765554433332233      889


Q ss_pred             EEEEecChhHHHHH-HHHHHHHHcCCeEEEeCC----CCHHHHHHHHhhcCCceEecchHHHHHHHhCccc--CCCCCCC
Q 008749          243 VSLITLPLFHVFGF-LALVRVVAVSETAVFMER----FDFETMLKTVDKYKLTSMPVSPPLVVALTKSELT--KKYDLSS  315 (555)
Q Consensus       243 ~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~  315 (555)
                      ++++.+|++|++|+ ..++.+|+.|+++++.+.    +++..+++.++++++|+++++|++++.|.+....  ...++++
T Consensus       296 ~~~~~~p~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~s  375 (643)
T d1pg4a_         296 IYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSS  375 (643)
T ss_dssp             EEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTT
T ss_pred             EEEEeCChHHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCc
Confidence            99999999999998 567789999999998753    4789999999999999999999999999887543  4567899


Q ss_pred             ceEEEEccCCCCHHHHHHHHHHCC--CCcEEcccCccccccccccCCCCcccCCCCCcccccCCcEEEEEcCCCCcccCC
Q 008749          316 LQYLSCGGAPLGKEVTDKFKEKFP--SVEIIQGYGLTECGGLASSMRDSEETKRHGSVGRLHELMEAKVVDPVTGDALSP  393 (555)
Q Consensus       316 lr~v~~~G~~l~~~~~~~~~~~~~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~  393 (555)
                      ||.++++|+++++++.+++.+.++  ++.+++.||+||+++.++...........+++|+|++|++++|+| ++|++++.
T Consensus       376 Lr~i~~~G~pl~~~~~~~~~~~~g~~~~~i~~~yG~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~ivd-~~g~~~~~  454 (643)
T d1pg4a_         376 LRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVD-NEGHPQEG  454 (643)
T ss_dssp             CCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCS
T ss_pred             eEEEEEEeCCCCHHHHHHHHHHhCCCCceEEEeechhhccceEEecCCCccCCCCCccccccCCCEEEEEC-CCCCCCCC
Confidence            999999999999999999999983  578999999999988776544434455678999999999999999 67899999


Q ss_pred             CCccEEEEeC--CcccccccCCchhhhccc--CCCCeeecCceEEEecCCcEEEEcccCCeeeeCCeeeChHHHHHHHhc
Q 008749          394 AQKGELWLRG--PTIMKGYIGDNKATIETV--DSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQIPPAELEHLLQS  469 (555)
Q Consensus       394 g~~Gel~v~~--~~~~~gy~~~~~~~~~~~--~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~i~~~~Ie~~l~~  469 (555)
                      |+.|||+++|  |+++.||+++++.+...+  ..+|||+|||+|++|+||++++.||+||+||++|++|+|.|||++|.+
T Consensus       455 g~~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~~  534 (643)
T d1pg4a_         455 ATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVA  534 (643)
T ss_dssp             SEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHH
T ss_pred             CceEEEEEecCCCcccccccCChhhchhhhcccCCCeEEcCCEEEECCCceEEEecccccEEEECCEEECHHHHHHHHHh
Confidence            9999999999  578899999998777664  347899999999999999999999999999999999999999999999


Q ss_pred             CCCcceEEEEeeeCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCccceEEEccccCCCCCCcccHHHHHHH
Q 008749          470 NPEIADAAVIPYPDEEAGQIPMAFVVRKPGSSINE---AQLMDFIAKQVAPYKKIRRVAFVNSIPKSEAGKILRRELVNH  546 (555)
Q Consensus       470 ~~~i~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GKv~r~~l~~~  546 (555)
                      +|+|.+|+|++++++..++.+++||+++++...+.   .+|+++++++|++|++|..|+++++||+|++||++|++|+++
T Consensus       535 ~p~V~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~~~~~~~~i~~~~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R~~Lr~~  614 (643)
T d1pg4a_         535 HPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKI  614 (643)
T ss_dssp             STTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHHH
T ss_pred             CCCcceEEEEEEECCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCcccCccEEEEECCCCCCCCcCccHHHHHHH
Confidence            99999999999999988999999999998877775   479999999999999999999999999999999999999999


Q ss_pred             HhcC
Q 008749          547 ALSG  550 (555)
Q Consensus       547 ~~~~  550 (555)
                      +...
T Consensus       615 ~~~~  618 (643)
T d1pg4a_         615 AAGD  618 (643)
T ss_dssp             HHTC
T ss_pred             hcCC
Confidence            8764
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure