Citrus Sinensis ID: 008752

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-----
MGNCQSSVMFHKLKEKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLNFEA
ccccccHHHHHHHcccccccccccccccccccccEEEEEEEEEEEEccccccccccHHHHHHHHccccEEEEEEEEcEEcccccccccccccHHcccccccccccccccEEEEEEEEEEEccccccEEEEEEcccccEEEEEEEEEEEcccccEEEEEccccccccccccccEEEccccccccccccHHHHHHHHHHHHHHHcccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccHHHccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHccccccEEccccccccccccccccccccccccHHHHHHccccccHHHHHHcccEEEEcccccccccccccccccccccccEEEEEEccccccEEEEEEEccccccccccccccEEEccccccccccHHHHHHHHHHHccccHHHHHHHHHHcccccccEEEcccc
cccccHHHHHHHHHHHHcccccccccccccccccEEEEEEEEEEEHHHccccHHcccccccHHHHccccEEEEEEEEEEEcccccccEEEcccEEccEEEcccccccccEEEEEEEEEEccccccEEEEEEEEcccccEEEEEEEEEcccccccEEEEEEEEEcEHHHccccEEEEccccccHHHccHHHHHHHHHHHHHHHcccccccccccccccEEcEcccccHHHcHHHccccEccccccccccEEcccccEcccccccEcccccccccccccHHHccccccHHHcHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHcccEcccccHHHHHHHHccccccHHHHcEccccccEEccccHHHcccccHHHcHHHHHHHHHHcccccccEEccccccccccccccccccccccccHHHccccccccHHHHHHcccEEEEEEccccHHHHHHHcccccEccEEEEEEEEcccccEEEEEEEEEEcccccHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccEEEccc
mgncqssvMFHKLKEkvcawpitgtktkgvdesktkIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISavnadpanelRGRLGKVAYLEKWITTITPLTAVETLFTITfdwdeamgvpgafiirnhhhsqfylktvtledvpghgrihfvcnswvypthrykydrvffsnktylpcqtpeplrKYRREELVNLrgngkgelkewdRVYDYAFyndlgnpdkgpeyarpvlggsqeypyprrgrtgrkptktdpnserrlplisldiyvprderfghlkfSDFLAYALKSLVQILLPEITSLCDktinefdsfDDVLNLYEggiklpnsqtvskirdriPWEMLKELVRNDgerflkfpmpdvikedrsawRTDEEFAREMLAGVNPVIISrlqefppasnldpkvygnqhssiTRADIERNMNELTIDEAIEnkklftldhhdalmPYLRRINSTNTKTYASRTLLLlqndgtlkplaielslphpqgdhhgavskvftpaengveGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLNFEA
MGNCQSSVMFHKLkekvcawpitgtktkgvdesktkikGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITtitpltavETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKtylpcqtpeplrkyrREELVnlrgngkgelkewDRVYDYAFYNDLGNPDKGPEYARpvlggsqeypyprrgrtgrkptktdpnserrlplislDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEggiklpnsqtvskirdriPWEMLKELVRndgerflkfpmpdvikedrsAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLNFEA
MGNCQSSVMFHKLKEKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEypyprrgrtgrkptktDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLNFEA
*******VMFHKLKEKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLG*****************************************LPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEF**********************I*RNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPH****HHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLN***
************************************IKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLIS*********************KWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELV***GN*KGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIEL***********A*SKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLNFE*
MGNCQSSVMFHKLKEKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRR**************ERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLNFEA
***CQS*V*FHKLKEKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLNFEA
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SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGNCQSSVMFHKLKEKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLNFEA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query555 2.2.26 [Sep-21-2011]
Q9LUW0 886 Linoleate 9S-lipoxygenase yes no 0.956 0.599 0.703 0.0
Q43191 862 Probable linoleate 9S-lip N/A no 0.920 0.592 0.691 0.0
P38415 860 Linoleate 9S-lipoxygenase N/A no 0.935 0.603 0.660 0.0
Q43190 860 Probable linoleate 9S-lip N/A no 0.935 0.603 0.656 0.0
Q41238 857 Linoleate 9S-lipoxygenase N/A no 0.935 0.605 0.656 0.0
Q06327 859 Linoleate 9S-lipoxygenase no no 0.918 0.593 0.664 0.0
O24379 861 Linoleate 9S-lipoxygenase N/A no 0.935 0.602 0.659 0.0
Q43189 861 Probable linoleate 9S-lip N/A no 0.935 0.602 0.651 0.0
O22508 861 Probable linoleate 9S-lip N/A no 0.935 0.602 0.645 0.0
P37831 861 Linoleate 9S-lipoxygenase N/A no 0.935 0.602 0.647 0.0
>sp|Q9LUW0|LOX5_ARATH Linoleate 9S-lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2 Back     alignment and function desciption
 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/543 (70%), Positives = 444/543 (81%), Gaps = 12/543 (2%)

Query: 9   MFHK-LKEKVCAWPITGTKTKGVDE-----SKTKIKGTVVLMKKNVLDFNDMKASFLDRL 62
           M H  + E +C  P T  KTK ++E     +  KI+G VV+MKKN+LDF D+ AS LDR+
Sbjct: 1   MIHTDIAEILCVKPKTTKKTKTMEEDVKKTTTMKIEGEVVVMKKNLLDFKDVMASLLDRV 60

Query: 63  HELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTI-TPLTAVETLFTITFDWDE 121
           +ELLG+ VS+ LIS+   DPANE RGRLGK A+LEKW+T I T +TA ET F +TFDWDE
Sbjct: 61  NELLGRRVSLHLISSHQPDPANEKRGRLGKAAHLEKWVTKIKTSVTAEETAFGVTFDWDE 120

Query: 122 AMGVPGAFIIRNHHHSQFYLKTVTLEDVP----GHGRIHFVCNSWVYPTHRYKYDRVFFS 177
           +MG P AF+I+NHHHSQFYLK++TL   P    G   IHF+CNSW+YP HRY+ DRVFFS
Sbjct: 121 SMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFS 180

Query: 178 NKTYLPCQTPEPLRKYRREELVNLRGNGKG-ELKEWDRVYDYAFYNDLGNPDKGPEYARP 236
           NK YLP +TPE +++ R EEL NLRGN KG E KEWDRVYDYA+YNDLG PDKGP+  RP
Sbjct: 181 NKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDLGAPDKGPDSVRP 240

Query: 237 VLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALK 296
           VLGGS E PYPRRG+TGRK TK+DP SE RL L++L+IYVPRDERF H+KFSDFLAYALK
Sbjct: 241 VLGGSPELPYPRRGKTGRKSTKSDPKSESRLALLNLNIYVPRDERFSHVKFSDFLAYALK 300

Query: 297 SLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVR 356
           S+ Q+L+PEI S+CDKTINEFDSF+DV +LY+G IKL N  T+SK+RD IPWEM +ELVR
Sbjct: 301 SVTQVLVPEIASVCDKTINEFDSFEDVFHLYDGSIKLANGHTISKLRDVIPWEMFRELVR 360

Query: 357 NDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGN 416
           NDGERFLK+P+PD++KE RSAWRTDEEFAREMLAG+NPV+ISRLQEFPP S LD   YGN
Sbjct: 361 NDGERFLKYPLPDILKESRSAWRTDEEFAREMLAGLNPVVISRLQEFPPKSCLDSAKYGN 420

Query: 417 QHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLL 476
           QHSSI    IE NMN L + EA+E  KL+ LDHHDALMPYL RINSTNTKTYA+RTLLLL
Sbjct: 421 QHSSIRTEHIESNMNGLNVQEALEQNKLYILDHHDALMPYLTRINSTNTKTYATRTLLLL 480

Query: 477 QNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLV 536
           Q DGTLKPLAIELSLPH QG+ +G+VSKVFTPAE GVEGSVWQLAKAYAAVNDSGYHQL+
Sbjct: 481 QADGTLKPLAIELSLPHAQGESYGSVSKVFTPAEKGVEGSVWQLAKAYAAVNDSGYHQLI 540

Query: 537 SHW 539
           SHW
Sbjct: 541 SHW 543
9S-lipoxygenase that can use linoleic acid or linolenic acid as substrates. Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Function as regulators of root development by controlling the emergence of lateral roots.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 5EC: 8
>sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum GN=LOX1.5 PE=2 SV=1 Back     alignment and function description
>sp|P38415|LOXA_SOLLC Linoleate 9S-lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1 Back     alignment and function description
>sp|Q43190|LOX14_SOLTU Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum GN=LOX1.4 PE=2 SV=1 Back     alignment and function description
>sp|Q41238|LOX16_SOLTU Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum GN=LOX1.6 PE=1 SV=1 Back     alignment and function description
>sp|Q06327|LOX1_ARATH Linoleate 9S-lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1 Back     alignment and function description
>sp|O24379|LOX12_SOLTU Linoleate 9S-lipoxygenase 2 OS=Solanum tuberosum GN=LOX1.2 PE=1 SV=1 Back     alignment and function description
>sp|Q43189|LOX13_SOLTU Probable linoleate 9S-lipoxygenase 3 OS=Solanum tuberosum GN=LOX1.3 PE=2 SV=1 Back     alignment and function description
>sp|O22508|LOX18_SOLTU Probable linoleate 9S-lipoxygenase 8 OS=Solanum tuberosum GN=LOX1.8 PE=2 SV=1 Back     alignment and function description
>sp|P37831|LOX11_SOLTU Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query555
255551451 868 lipoxygenase, putative [Ricinus communis 0.947 0.605 0.821 0.0
224111206 880 predicted protein [Populus trichocarpa] 0.971 0.612 0.809 0.0
224099785 880 predicted protein [Populus trichocarpa] 0.971 0.612 0.805 0.0
33235471 884 lipoxygenase [Fragaria x ananassa] 0.972 0.610 0.766 0.0
229002575 886 lipoxygenase [Actinidia arguta] 0.967 0.606 0.746 0.0
268636247 859 lipoxygenase [Vitis vinifera] 0.920 0.594 0.757 0.0
296088356 738 unnamed protein product [Vitis vinifera] 0.920 0.692 0.753 0.0
359487757 859 PREDICTED: probable linoleate 9S-lipoxyg 0.920 0.594 0.753 0.0
208611514 861 lipoxygenase [Camellia sinensis] 0.942 0.607 0.723 0.0
225450913 866 PREDICTED: probable linoleate 9S-lipoxyg 0.920 0.590 0.738 0.0
>gi|255551451|ref|XP_002516771.1| lipoxygenase, putative [Ricinus communis] gi|223543859|gb|EEF45385.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/527 (82%), Positives = 483/527 (91%), Gaps = 1/527 (0%)

Query: 15  EKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQL 74
           E  CA P        V E + KIKGTVVLMKKNVLDF+D+KASFLDR+HELLGKGVSMQL
Sbjct: 2   EVFCAQPRNQPNGGTVTE-RFKIKGTVVLMKKNVLDFSDIKASFLDRVHELLGKGVSMQL 60

Query: 75  ISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH 134
           ISAV+ DPAN+LRG+LGKVAYLEKW+ +ITP+TAV+T+F ITFDWDE+MGVPGAFIIRNH
Sbjct: 61  ISAVHHDPANKLRGKLGKVAYLEKWVRSITPITAVDTVFNITFDWDESMGVPGAFIIRNH 120

Query: 135 HHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYR 194
           HHSQ YLKTVTL+DVPGHGR+HFVCNSWVYP H Y YDRVFFSNKTYLPCQTP+PLRKYR
Sbjct: 121 HHSQLYLKTVTLDDVPGHGRVHFVCNSWVYPAHCYNYDRVFFSNKTYLPCQTPKPLRKYR 180

Query: 195 REELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGR 254
            EEL+NLRGNGKG+L+EWDRVYDYA+YNDLG+PDKG EYARPVLGGS++YPYPRRGRTGR
Sbjct: 181 EEELINLRGNGKGKLEEWDRVYDYAYYNDLGSPDKGKEYARPVLGGSEQYPYPRRGRTGR 240

Query: 255 KPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTI 314
           KPTKTDPNSE RLPL++LDIYVPRDERFGH+KFSDFLAYALKS+VQ+L+PEI SLCDKTI
Sbjct: 241 KPTKTDPNSESRLPLLNLDIYVPRDERFGHIKFSDFLAYALKSVVQVLVPEIKSLCDKTI 300

Query: 315 NEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKED 374
           NEFDSF+DVL LYEGGIKLP+    +K+R+RIPWEMLKELVRNDGERFLKFPMPDVIKED
Sbjct: 301 NEFDSFEDVLKLYEGGIKLPSGTKATKLRNRIPWEMLKELVRNDGERFLKFPMPDVIKED 360

Query: 375 RSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELT 434
           +SAWRTDEEFAREMLAGVNPVIISRLQEFPP S LDPK YGNQ SSIT+  +E++MN LT
Sbjct: 361 KSAWRTDEEFAREMLAGVNPVIISRLQEFPPPSKLDPKEYGNQKSSITKEHVEKSMNGLT 420

Query: 435 IDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHP 494
           +D+AI N KLF LDHHDALMPYL +INST T+TYA+RT+LLLQ+DGTLKPLAIELSLPHP
Sbjct: 421 VDQAIRNNKLFILDHHDALMPYLTKINSTTTRTYATRTILLLQDDGTLKPLAIELSLPHP 480

Query: 495 QGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCD 541
           QG+ HGAVSKVFTPAE+GVEGSVWQLAKAYAAVNDSGYHQL+SHW +
Sbjct: 481 QGERHGAVSKVFTPAEDGVEGSVWQLAKAYAAVNDSGYHQLISHWLN 527

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224111206|ref|XP_002315780.1| predicted protein [Populus trichocarpa] gi|222864820|gb|EEF01951.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224099785|ref|XP_002311617.1| predicted protein [Populus trichocarpa] gi|222851437|gb|EEE88984.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|33235471|emb|CAE17327.1| lipoxygenase [Fragaria x ananassa] Back     alignment and taxonomy information
>gi|229002575|dbj|BAH57745.1| lipoxygenase [Actinidia arguta] Back     alignment and taxonomy information
>gi|268636247|gb|ACZ17392.1| lipoxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088356|emb|CBI36801.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359487757|ref|XP_002284535.2| PREDICTED: probable linoleate 9S-lipoxygenase 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|208611514|gb|ABW75772.2| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|225450913|ref|XP_002280651.1| PREDICTED: probable linoleate 9S-lipoxygenase 5-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query555
TAIR|locus:2087837 886 LOX5 [Arabidopsis thaliana (ta 0.956 0.599 0.686 2.8e-201
TAIR|locus:2011030 859 LOX1 "lipoxygenase 1" [Arabido 0.917 0.592 0.636 3.9e-179
UNIPROTKB|P29250 870 LOX1.1 "Linoleate 9S-lipoxygen 0.915 0.583 0.521 1.5e-140
TAIR|locus:2018848 919 LOX3 "lipoxygenase 3" [Arabido 0.909 0.549 0.376 3.5e-91
TAIR|locus:2030215 926 LOX4 "lipoxygenase 4" [Arabido 0.891 0.534 0.385 3.5e-91
TAIR|locus:2096915 896 LOX2 "lipoxygenase 2" [Arabido 0.857 0.531 0.382 7.4e-82
UNIPROTKB|P38419 924 CM-LOX1 "Lipoxygenase 7, chlor 0.911 0.547 0.359 2.3e-78
TAIR|locus:2008808 917 LOX6 "lipoxygenase 6" [Arabido 0.882 0.534 0.357 5.5e-70
ZFIN|ZDB-GENE-061013-229 663 zgc:152891 "zgc:152891" [Danio 0.304 0.254 0.284 9.2e-07
UNIPROTKB|F1MCH9 663 ALOX15 "Uncharacterized protei 0.255 0.214 0.292 9.2e-06
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1948 (690.8 bits), Expect = 2.8e-201, P = 2.8e-201
 Identities = 373/543 (68%), Positives = 432/543 (79%)

Query:     9 MFHK-LKEKVCAWPITGTKTKGVDES--KT---KIKGTVVLMKKNVLDFNDMKASFLDRL 62
             M H  + E +C  P T  KTK ++E   KT   KI+G VV+MKKN+LDF D+ AS LDR+
Sbjct:     1 MIHTDIAEILCVKPKTTKKTKTMEEDVKKTTTMKIEGEVVVMKKNLLDFKDVMASLLDRV 60

Query:    63 HELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTI-TPLTAVETLFTITFDWDE 121
             +ELLG+ VS+ LIS+   DPANE RGRLGK A+LEKW+T I T +TA ET F +TFDWDE
Sbjct:    61 NELLGRRVSLHLISSHQPDPANEKRGRLGKAAHLEKWVTKIKTSVTAEETAFGVTFDWDE 120

Query:   122 AMGVPGAFIIRNHHHSQFYLKTVTLEDVP-GHG---RIHFVCNSWVYPTHRYKYDRVFFS 177
             +MG P AF+I+NHHHSQFYLK++TL   P G G    IHF+CNSW+YP HRY+ DRVFFS
Sbjct:   121 SMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFS 180

Query:   178 NKTYLPCQTPEPLRKYRREELVNLRGNGKG-ELKEWDRVYDYAFYNDLGNPDKGPEYARP 236
             NK YLP +TPE +++ R EEL NLRGN KG E KEWDRVYDYA+YNDLG PDKGP+  RP
Sbjct:   181 NKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDLGAPDKGPDSVRP 240

Query:   237 VLGGSQEXXXXXXXXXXXXXXXXDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALK 296
             VLGGS E                DP SE RL L++L+IYVPRDERF H+KFSDFLAYALK
Sbjct:   241 VLGGSPELPYPRRGKTGRKSTKSDPKSESRLALLNLNIYVPRDERFSHVKFSDFLAYALK 300

Query:   297 SLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVR 356
             S+ Q+L+PEI S+CDKTINEFDSF+DV +LY+G IKL N  T+SK+RD IPWEM +ELVR
Sbjct:   301 SVTQVLVPEIASVCDKTINEFDSFEDVFHLYDGSIKLANGHTISKLRDVIPWEMFRELVR 360

Query:   357 NDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGN 416
             NDGERFLK+P+PD++KE RSAWRTDEEFAREMLAG+NPV+ISRLQEFPP S LD   YGN
Sbjct:   361 NDGERFLKYPLPDILKESRSAWRTDEEFAREMLAGLNPVVISRLQEFPPKSCLDSAKYGN 420

Query:   417 QHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLL 476
             QHSSI    IE NMN L + EA+E  KL+ LDHHDALMPYL RINSTNTKTYA+RTLLLL
Sbjct:   421 QHSSIRTEHIESNMNGLNVQEALEQNKLYILDHHDALMPYLTRINSTNTKTYATRTLLLL 480

Query:   477 QNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLV 536
             Q DGTLKPLAIELSLPH QG+ +G+VSKVFTPAE GVEGSVWQLAKAYAAVNDSGYHQL+
Sbjct:   481 QADGTLKPLAIELSLPHAQGESYGSVSKVFTPAEKGVEGSVWQLAKAYAAVNDSGYHQLI 540

Query:   537 SHW 539
             SHW
Sbjct:   541 SHW 543
GO:0005737 "cytoplasm" evidence=ISM
GO:0016165 "lipoxygenase activity" evidence=ISS;IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0010311 "lateral root formation" evidence=IMP
GO:0048364 "root development" evidence=IMP
GO:0034440 "lipid oxidation" evidence=IDA
GO:0009536 "plastid" evidence=IDA
GO:1900366 "negative regulation of defense response to insect" evidence=IMP
GO:0009611 "response to wounding" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061013-229 zgc:152891 "zgc:152891" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1MCH9 ALOX15 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LUW0LOX5_ARATH1, ., 1, 3, ., 1, 1, ., 5, 80.70340.95670.5993yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.11LOW CONFIDENCE prediction!
3rd Layer1.13.11.120.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
PLN02337 866 PLN02337, PLN02337, lipoxygenase 0.0
pfam00305 667 pfam00305, Lipoxygenase, Lipoxygenase 0.0
PLN02264 919 PLN02264, PLN02264, lipoxygenase 1e-131
PLN02305 918 PLN02305, PLN02305, lipoxygenase 1e-122
cd01751137 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox 4e-57
smart00308105 smart00308, LH2, Lipoxygenase homology 2 (beta bar 2e-28
pfam01477115 pfam01477, PLAT, PLAT/LH2 domain 9e-22
cd00113116 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A 2e-05
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information 
 Score = 1062 bits (2749), Expect = 0.0
 Identities = 405/519 (78%), Positives = 451/519 (86%), Gaps = 3/519 (0%)

Query: 21  PITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNA 80
            ITG+  K     K KIKGTVVLMKKNVLDFND  AS LDR+HELLGKGVS+QLIS+   
Sbjct: 8   AITGSNNK---TKKEKIKGTVVLMKKNVLDFNDFNASVLDRVHELLGKGVSLQLISSTVV 64

Query: 81  DPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFY 140
           DP N LRG+LGK AYLEKWITTIT LTA E+ F +TFDWDE +GVPGAFII+N+HHS+FY
Sbjct: 65  DPENGLRGKLGKEAYLEKWITTITSLTAGESAFKVTFDWDEKIGVPGAFIIKNNHHSEFY 124

Query: 141 LKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVN 200
           LKTVTLEDVPGHGR+HFVCNSW+YP  RY+YDRVFFSNKTYLP QTP PLR YR EELVN
Sbjct: 125 LKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRPYREEELVN 184

Query: 201 LRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTD 260
           LRG+GKGELKEWDRVYDY +YNDLG+PDKG  YARPVLGGSQEYPYPRRGRTGRKPTKTD
Sbjct: 185 LRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTD 244

Query: 261 PNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSF 320
           PNSE RLPL+SL+IYVPRDERFGHLK SDFLAYALK++ Q+L+PE+ +L DKT NEFDSF
Sbjct: 245 PNSESRLPLLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSF 304

Query: 321 DDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRT 380
           +DVL LYEGGIKLPN   + ++R  IP EMLKEL+R DGE  LKFPMP VIKED+SAWRT
Sbjct: 305 EDVLKLYEGGIKLPNGPLLEELRKNIPLEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRT 364

Query: 381 DEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIE 440
           DEEFAREMLAGVNPV+I RL EFPP S LDPK YG+Q+SSIT   IE+N+  LT+ EA+E
Sbjct: 365 DEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEGLTVQEALE 424

Query: 441 NKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHG 500
             +LF LDHHDALMPYLRRINST+TKTYA+RTLL L++DGTLKPLAIELSLPHPQGD  G
Sbjct: 425 KNRLFILDHHDALMPYLRRINSTSTKTYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFG 484

Query: 501 AVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHW 539
           AVSKV+TPAE+GVEGSVWQLAKAY AVNDSGYHQL+SHW
Sbjct: 485 AVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHW 523

Length = 866
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information
>gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain Back     alignment and domain information
>gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 555
PLN02337 866 lipoxygenase 100.0
PLN02305 918 lipoxygenase 100.0
PLN02264 919 lipoxygenase 100.0
PF00305 667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
cd01751137 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re 100.0
smart00308105 LH2 Lipoxygenase homology 2 (beta barrel) domain. 99.4
PF01477113 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg 99.22
cd00113116 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin 99.13
cd02899109 PLAT_SR Scavenger receptor protein. A subfamily of 99.12
cd01753113 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u 98.95
cd01756120 PLAT_repeat PLAT/LH2 domain repeats of family of p 98.82
cd01752120 PLAT_polycystin PLAT/LH2 domain of polycystin-1 li 98.72
cd01754129 PLAT_plant_stress PLAT/LH2 domain of plant-specifi 98.59
cd01757114 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter 98.55
cd01755120 PLAT_lipase PLAT/ LH2 domain present in connection 89.86
>PLN02337 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=2.6e-160  Score=1339.05  Aligned_cols=536  Identities=75%  Similarity=1.238  Sum_probs=502.4

Q ss_pred             hHhHhhhhhccCccccccccccCCCcceEEEEEEEEecccccccccccchhhHHHhhcCCcEEEEEEeeecCCCcccccC
Q 008752            9 MFHKLKEKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRG   88 (555)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~l~LVS~~~~d~~t~~~g   88 (555)
                      |++++++.++|.-        ....+.+|||+|++|+|+++|++++.++++|.++|++|++|+|||||++.++|+||++|
T Consensus         1 ~~~~~~~~~~~~~--------~~~~~~~~~~~v~l~~k~~ld~~~~~~~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~g   72 (866)
T PLN02337          1 MLGGIIDAITGSN--------NKTKKEKIKGTVVLMKKNVLDFNDFNASVLDRVHELLGKGVSLQLISSTVVDPENGLRG   72 (866)
T ss_pred             CcccccHhhhcCC--------ccCccceEEEEEEEEEecccchhhcccchhhhHHHhcCCeEEEEEEeccccccccCCcc
Confidence            4455666666630        01122589999999999999999999999999999999999999999998888898899


Q ss_pred             ccCccccccccccccCCCCCceEEEEEEeeccCCCCCceEEEeecCCCCceeEeEEEEeecCCCceEEEEecccccCCCC
Q 008752           89 RLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHR  168 (555)
Q Consensus        89 k~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~dfG~pgai~V~n~~~~e~fl~~i~l~~~p~~~~i~FpCnsWV~~~~~  168 (555)
                      |+++++.|++|..+.....+++++|+|+|+|+++||+||||+|+|.|++||||++|+|+++|++++|||+||||||+.++
T Consensus        73 k~~k~a~l~~w~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~  152 (866)
T PLN02337         73 KLGKEAYLEKWITTITSLTAGESAFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKR  152 (866)
T ss_pred             ccCCccchhhhccCCCCCCCCceEEEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCC
Confidence            99999999999976444456677999999999999999999999999999999999999999889999999999999999


Q ss_pred             CccceeeecccccccCCCChHhHHHHHHHHHhhhCCCCCCCcccCeEEeccccCCCCCCCCCCCCCcccCCCCCCCCCCC
Q 008752          169 YKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPR  248 (555)
Q Consensus       169 ~~~~Riff~nkayLP~~tp~~L~~~Re~EL~~lRg~g~Gerk~~dRiYdydvYndlG~Pd~~~~~~RPvLGgs~~~PYPR  248 (555)
                      ++.+||||+||+|||++||++|++|||+||++|||||+||||+||||||||||||||+||++++++||||||+++|||||
T Consensus       153 ~~~~RiFF~nk~ylp~~tP~~l~~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPR  232 (866)
T PLN02337        153 YRYDRVFFSNKTYLPSQTPAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPR  232 (866)
T ss_pred             CCCCceEecCCCcCcccccHHHHHHHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCccccCCCCcccccCCCCccCcccccchhhchHHHHHHhhhhhHhhhccCCCCCCCCHHHHHHHhc
Q 008752          249 RGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYE  328 (555)
Q Consensus       249 R~RTGR~~~~~D~~~esr~~~~~~~~yvPrDE~Fs~~K~~~f~~~~lk~~~~~~~p~l~~~~~~~~~~f~sf~di~~Ly~  328 (555)
                      ||||||+|+++||.+|||.+...-.+||||||+|+++|+++|.++++||++|.++|.|+++++.+..+|++|+||++||.
T Consensus       233 R~rTgr~~t~~dp~~esr~~~~~~~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~  312 (866)
T PLN02337        233 RGRTGRKPTKTDPNSESRLPLLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYE  312 (866)
T ss_pred             cccCCCCCCCCCCccccccccCCCCcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhh
Confidence            99999999999999999976531147999999999999999999999999999999999999888999999999999999


Q ss_pred             CCCcCCCccccchhccccchHHHHHhhhcccccccccCCchhhhhccccccCcHHHHHHHhcCCCcccccccccCCCCCC
Q 008752          329 GGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASN  408 (555)
Q Consensus       329 ~~~~lp~~~~~~~~~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~~~~~W~~D~eFgrQ~LaG~NP~~I~~~~~~P~~s~  408 (555)
                      +|+.+|..+..+.+++.+|+++++++++++++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+
T Consensus       313 ~g~~lp~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~  392 (866)
T PLN02337        313 GGIKLPNGPLLEELRKNIPLEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSK  392 (866)
T ss_pred             cCCCCCCchHHHHhhhcChHHHHHHHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCccc
Confidence            99999986666678888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCcccHHHHHhhcCCCcHHHHhhcCcEEEEcCCcccccccccccCCCCccccceeEEEecCCCceeeEEEE
Q 008752          409 LDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIE  488 (555)
Q Consensus       409 Ldp~~yg~~~~~it~e~i~~~l~G~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~yAp~~Lffl~~dG~L~PIAIq  488 (555)
                      |||++||+++|+||++||++.|+|+||+|||++|||||+||||.+|||+.++|...+++|||+||||++++|+|+|||||
T Consensus       393 ld~~~yg~~~s~iT~e~v~~~L~g~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k~yA~~tLffl~~dG~L~PlAIq  472 (866)
T PLN02337        393 LDPKKYGDQNSSITEEHIEKNLEGLTVQEALEKNRLFILDHHDALMPYLRRINSTSTKTYATRTLLFLKDDGTLKPLAIE  472 (866)
T ss_pred             CChhhcCCccCccCHHHHHhccCCccHHHHHHcCCEEEEecchhcCcccccccCCCCccccceeEEEECCCCCEeEEEEE
Confidence            99999999999999999999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             ecCCCCCCCCCCCCCeEEeCCCCCCCCcHHHHHHHHHHhcccchhHHHHHhhhccccceeeeee
Q 008752          489 LSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLN  552 (555)
Q Consensus       489 L~~p~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HQlisHllrTHlv~E~~~v~  552 (555)
                      |++|++.++.+++.++||||+++++++|.|+||||||++||++|||+|+||++|||++|||+|.
T Consensus       473 L~~p~~~~~~~g~~~~VfTP~~~~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIA  536 (866)
T PLN02337        473 LSLPHPQGDKFGAVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIA  536 (866)
T ss_pred             eccCCCCcccCCCCCCeECCCCCCCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHH
Confidence            9999877666778899999998777799999999999999999999999999999999999985

>PLN02305 lipoxygenase Back     alignment and domain information
>PLN02264 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 Back     alignment and domain information
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain Back     alignment and domain information
>cd02899 PLAT_SR Scavenger receptor protein Back     alignment and domain information
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase Back     alignment and domain information
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function Back     alignment and domain information
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins Back     alignment and domain information
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function Back     alignment and domain information
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family Back     alignment and domain information
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
1ik3_A 857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 1e-169
1rov_A 857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 1e-167
2iuj_A 853 Crystal Structure Of Soybean Lipoxygenase-B Length 1e-151
3pzw_A 839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 1e-147
3bnd_A 839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 1e-147
3bnc_A 839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 1e-147
1fgr_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 1e-147
2sbl_B 839 The Three-Dimensional Structure Of An Arachidonic A 1e-147
3bne_A 839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 1e-147
1fgm_A 839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 1e-147
1fgt_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 1e-147
3bnb_A 839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 1e-147
1y4k_A 839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 1e-147
1fgq_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 1e-147
1fgo_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 1e-146
2iuk_A 864 Crystal Structure Of Soybean Lipoxygenase-D Length 1e-145
1lox_A 662 Rabbit Reticulocyte 15-Lipoxygenase Length = 662 3e-06
2p0m_A 662 Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy 3e-06
3rde_A 573 Crystal Structure Of The Catalytic Domain Of Porcin 6e-06
3v92_B 691 S663a Stable-5-Lox Length = 691 8e-05
3v98_A 691 S663d Stable-5-Lox Length = 691 8e-05
3o8y_A 691 Stable-5-Lipoxygenase Length = 691 8e-05
3vf1_A 698 Structure Of A Calcium-Dependent 11r-Lipoxygenase S 1e-04
3fg3_A 696 Crystal Structure Of Delta413-417:gs I805w Lox Leng 2e-04
3fg4_A 696 Crystal Structure Of Delta413-417:gs I805a Lox Leng 2e-04
2fnq_A 699 Insights From The X-Ray Crystal Structure Of Coral 2e-04
3fg1_A 696 Crystal Structure Of Delta413-417:gs Lox Length = 6 3e-04
3dy5_A 1066 Allene Oxide Synthase 8r-Lipoxygenase From Plexaura 3e-04
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure 
Iteration: 1

 Score =  590 bits (1522), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 302/521 (57%), Positives = 370/521 (71%), Gaps = 25/521 (4%)
Query: 36  KIKGTVVLMKKNVLDFN-------------DMKASFLDRLHELLGKGVSMQLISAVNADP 82
           KIKGTVVLM+KNVLD N             D+  S LD L   LG+ VS+QLISA  AD 
Sbjct: 11  KIKGTVVLMRKNVLDVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRSVSLQLISATKAD- 69
Query: 83  ANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLK 142
           AN  +G+LGK  +LE  IT++  L A ++ F I F+WD+  G+PGAF I+N   ++F+L 
Sbjct: 70  ANG-KGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLV 128
Query: 143 TVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLR 202
           ++TLED+P HG IHFVCNSW+Y    +K DR+FF+N+TYLP +TP PL KYR EEL NLR
Sbjct: 129 SLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLR 188
Query: 203 GNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEXXXXXXXXXXXXXXXXDPN 262
           G+G GE KEW+R+YDY  YNDLG+PDKG  +ARPVLGG+                  DPN
Sbjct: 189 GDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPN 248
Query: 263 SERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDK--TINEFDSF 320
           SE R    S D+Y+PRDE FGHLK SDFL Y LKS+ Q +LP + S  D   T  EFDSF
Sbjct: 249 SESR----SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSF 304
Query: 321 DDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRT 380
           D+V  LY GGIKLP +  +SKI    P  +LKE+ R DGE+ LKFP P VI+  +SAW T
Sbjct: 305 DEVHGLYSGGIKLP-TDIISKIS---PLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMT 360
Query: 381 DEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIE 440
           DEEFAREMLAGVNP +I  L++FPP S LD +VYG+  S IT+  +E N+  LT+DEAI+
Sbjct: 361 DEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGLTVDEAIQ 420
Query: 441 NKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHG 500
           NK+LF LDHHD +MPYLRRIN+T+TK YA+RT+L L+NDGTL+PLAIELSLPHPQGD  G
Sbjct: 421 NKRLFLLDHHDPIMPYLRRINATSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 501 AVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCD 541
           A S+VF PA+ GVE S+W LAKAY  VNDS YHQLVSHW +
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLN 521
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 Back     alignment and structure
>pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 Back     alignment and structure
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 Back     alignment and structure
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 Back     alignment and structure
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 Back     alignment and structure
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 Back     alignment and structure
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 Back     alignment and structure
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 0.0
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 0.0
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 0.0
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 2e-57
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 6e-55
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 2e-53
3d3l_A 541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 5e-46
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 1e-43
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 4e-43
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 8e-38
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  644 bits (1661), Expect = 0.0
 Identities = 283/509 (55%), Positives = 351/509 (68%), Gaps = 16/509 (3%)

Query: 34  KTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKV 93
             KIKGTVVLM KN L+ N    S +D L+  LG+ VS+QLISA  AD     +G++GK 
Sbjct: 5   GHKIKGTVVLMPKNELEVNPD-GSAVDNLNAFLGRSVSLQLISATKADAHG--KGKVGKD 61

Query: 94  AYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHG 153
            +LE   T++  L A E+ F I F+WD +MG+PGAF I+N+   +F+LK++TLE +   G
Sbjct: 62  TFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQG 121

Query: 154 RIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWD 213
            I FVCNSWVY T  YK  R+FF+N TY+P +TP PL  YR EEL +LRGNG GE KE+D
Sbjct: 122 TIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYD 181

Query: 214 RVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLD 273
           R+YDY  YNDLGNPDK  + ARPVLGGS  +PYPRRGRTGR PT TDPN+E++       
Sbjct: 182 RIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGE----V 237

Query: 274 IYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGI 331
            YVPRDE  GHLK  D L    KSL QI+ P   S  D   T  EF SF DV +LYEGGI
Sbjct: 238 FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGI 297

Query: 332 KLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAG 391
           KLP       I   IP  ++KEL R DG+  LKFP P V++  +SAW TDEEFAREM+AG
Sbjct: 298 KLPR----DVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAG 353

Query: 392 VNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHD 451
           VNP +I  L+EFPP SNLDP +YG+Q S IT   ++ +    T+DEA+ +++LF LD+HD
Sbjct: 354 VNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDG--YTMDEALGSRRLFMLDYHD 411

Query: 452 ALMPYLRRINS-TNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAE 510
             MPY+R+IN   + KTYA+RT+L L+ DGTLKP+AIELSLPH  GD   AVS+V  PA+
Sbjct: 412 IFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK 471

Query: 511 NGVEGSVWQLAKAYAAVNDSGYHQLVSHW 539
            GVE ++W LAKAY  VNDS YHQL+SHW
Sbjct: 472 EGVESTIWLLAKAYVIVNDSCYHQLMSHW 500
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query555
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 100.0
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 100.0
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 100.0
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 100.0
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 100.0
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 100.0
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 100.0
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 100.0
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 100.0
3d3l_A 541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 100.0
2wxu_A370 Phospholipase C; cytolysis, hydrolase, hemolysis, 99.09
1olp_A370 Alpha-toxin; zinc phospholipase C, GAS gangrene de 99.08
3cwz_B384 RAB6IP1, RAB6-interacting protein 1; RAB small GTP 97.86
1hpl_A449 Lipase; hydrolase(carboxylic esterase); 2.30A {Equ 91.09
1bu8_A452 Protein (pancreatic lipase related protein 2); hyd 89.83
1rp1_A450 Pancreatic lipase related protein 1; hydrolase, li 89.66
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Back     alignment and structure
Probab=100.00  E-value=2.7e-151  Score=1272.47  Aligned_cols=508  Identities=55%  Similarity=0.944  Sum_probs=473.7

Q ss_pred             CCcceEEEEEEEEecccccccccc----------------------cchhhHHHhhcCCcEEEEEEeeecCCCcccccCc
Q 008752           32 ESKTKIKGTVVLMKKNVLDFNDMK----------------------ASFLDRLHELLGKGVSMQLISAVNADPANELRGR   89 (555)
Q Consensus        32 ~~~~~~k~~v~~~~~~~~~~~~~~----------------------~~~~d~~~~~~g~~v~l~LVS~~~~d~~t~~~gk   89 (555)
                      +.|.++||+|++|+|+++|++++.                      ++.+|++.+++|++|+|||||++.+ |+|| +||
T Consensus         6 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~-~~~~-~~k   83 (864)
T 2iuk_A            6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQT-DGSG-NGK   83 (864)
T ss_dssp             --CCCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEE-CSSS-CEE
T ss_pred             cCCCEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccC-CCCC-CCc
Confidence            345889999999999999998887                      8899999999999999999998865 7787 999


Q ss_pred             cCccccccccccccCCCCCceEEEEEEeeccCCCCCceEEEeecCCCCceeEeEEEEeecCCCceEEEEecccccCCCCC
Q 008752           90 LGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRY  169 (555)
Q Consensus        90 ~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~dfG~pgai~V~n~~~~e~fl~~i~l~~~p~~~~i~FpCnsWV~~~~~~  169 (555)
                      +|+++.|++|........+++++|+|+|.|+++||+||||+|+|.|++||||++|+|+++|+++++||+||||||+.+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~  163 (864)
T 2iuk_A           84 VGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSY  163 (864)
T ss_dssp             EEEEEECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGS
T ss_pred             CCCcccccccccCCCcCCCCcEEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCC
Confidence            99999999998443334567889999999999999999999999999999999999999998899999999999999999


Q ss_pred             ccceeeecccccccCCCChHhHHHHHHHHHhhhCCCCCCCcccCeEEeccccCCCCCCCCCCCCCcccCCCCCCCCCCCc
Q 008752          170 KYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRR  249 (555)
Q Consensus       170 ~~~Riff~nkayLP~~tp~~L~~~Re~EL~~lRg~g~Gerk~~dRiYdydvYndlG~Pd~~~~~~RPvLGgs~~~PYPRR  249 (555)
                      +.+||||+|++|||++||++|+++|++||++|||||+||||+||||||||||||||+||++++  |||||||++||||||
T Consensus       164 ~~~RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR  241 (864)
T 2iuk_A          164 KKNRIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLR  241 (864)
T ss_dssp             SSCEEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCE
T ss_pred             CCCceeccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCcc
Confidence            999999999999999999999999999999999999999999999999999999999999877  999999999999999


Q ss_pred             CCCCCCCCCCCCCCccccCCCCcccccCCCCccCcccccchhhchHHHHHHhhhhhHhhhcc--C-CCCCCCCHHHHHHH
Q 008752          250 GRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--K-TINEFDSFDDVLNL  326 (555)
Q Consensus       250 ~RTGR~~~~~D~~~esr~~~~~~~~yvPrDE~Fs~~K~~~f~~~~lk~~~~~~~p~l~~~~~--~-~~~~f~sf~di~~L  326 (555)
                      |||||+|+++||.+|||+     .+||||||+|++.|+++|.++++++++|.++|.|+++++  . +..+|+||+||++|
T Consensus       242 ~rtgr~~~~~dp~~e~~~-----~~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~l  316 (864)
T 2iuk_A          242 VRTGRERTRTDPNSEKPG-----EVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSL  316 (864)
T ss_dssp             ECCCCCBCSSCTTSBCCC-----CCCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTT
T ss_pred             ccCCCCCCCCCCCccccc-----cCCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHH
Confidence            999999999999999994     289999999999999999999999999999999999885  2 57899999999999


Q ss_pred             hcCCCcCCCccccchhccccchHHHHHhhhcccccccccCCchhhhhccccccCcHHHHHHHhcCCCcccccccccCCCC
Q 008752          327 YEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPA  406 (555)
Q Consensus       327 y~~~~~lp~~~~~~~~~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~~~~~W~~D~eFgrQ~LaG~NP~~I~~~~~~P~~  406 (555)
                      |++|++||.    +.+++.+|++++|++++++++.+++||+|++|++++++|++|++||||+|||+||++|++|++||++
T Consensus       317 y~~g~~l~~----~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~  392 (864)
T 2iuk_A          317 YEGGIKLPT----DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPK  392 (864)
T ss_dssp             TSSCEECCH----HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCC
T ss_pred             HhccccCch----hhhcccCcHHHHHHHhhccccchhcCCCcceecccchhhhchHHHHHHHhcCCCchhhhhhhccCCc
Confidence            999999886    3556668899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCCcccHHHHHhhcCCCcHHHHhhcCcEEEEcCCcccccccccccCCCC-ccccceeEEEecCCCceeeE
Q 008752          407 SNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNT-KTYASRTLLLLQNDGTLKPL  485 (555)
Q Consensus       407 s~Ldp~~yg~~~~~it~e~i~~~l~G~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~-~~yAp~~Lffl~~dG~L~PI  485 (555)
                      |+|||++||+++|+||++||+..|+|+||++||++|||||+||||++|||++++|.+.+ +.|||+||||++++|+|+||
T Consensus       393 s~ldp~~yg~~~s~it~e~i~~~l~g~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~Pl  472 (864)
T 2iuk_A          393 STLDPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPL  472 (864)
T ss_dssp             CCSCHHHHCCCCCCCCHHHHGGGTTTCCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEE
T ss_pred             ccCChhhcCCcccccCHHHHhhccCCCcHHHHHhcCCEEEecchhhhccchhhcccCCCceeecceEEEEEcCCCCEeEE
Confidence            99999999999999999999999999999999999999999999999999999998654 69999999999999999999


Q ss_pred             EEEecCCCCCCCCCCCCCeEEeCCCCCCCCcHHHHHHHHHHhcccchhHHHHHhhhccccceeeeee
Q 008752          486 AIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLN  552 (555)
Q Consensus       486 AIqL~~p~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HQlisHllrTHlv~E~~~v~  552 (555)
                      ||||++|++.+++.++.++||||+|+++++|.|+||||||++||++|||+|+||++||+++|||+|.
T Consensus       473 AIqLs~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IA  539 (864)
T 2iuk_A          473 AIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIA  539 (864)
T ss_dssp             EEEEEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHH
T ss_pred             EEEeeCCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence            9999998765555567899999998777789999999999999999999999999999999999874
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Back     alignment and structure
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Back     alignment and structure
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Back     alignment and structure
>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} Back     alignment and structure
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 Back     alignment and structure
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* Back     alignment and structure
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 555
d3bnea1 690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 0.0
d3bnea2143 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl 2e-79
d2p0ma1 551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 1e-61
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  527 bits (1358), Expect = 0.0
 Identities = 209/361 (57%), Positives = 254/361 (70%), Gaps = 13/361 (3%)

Query: 182 LPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGS 241
           +P +TP PL +YR EEL +LRGNG GE KE+DR+YDY  YNDLGNPDK  + ARPVLGGS
Sbjct: 1   VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60

Query: 242 QEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQI 301
             +PYPRRGRTGR PT TDPN+E++        YVPRDE  GHLK  D L    KSL QI
Sbjct: 61  STFPYPRRGRTGRGPTVTDPNTEKQGE----VFYVPRDENLGHLKSKDALEIGTKSLSQI 116

Query: 302 LLPEITSLCD--KTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDG 359
           + P   S  D   T  EF SF DV +LYEGGIKLP       I   IP  ++KEL R DG
Sbjct: 117 VQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPR----DVISTIIPLPVIKELYRTDG 172

Query: 360 ERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHS 419
           +  LKFP P V++  +SAW TDEEFAREM+AGVNP +I  L+EFPP SNLDP +YG+Q S
Sbjct: 173 QHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSS 232

Query: 420 SITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRIN-STNTKTYASRTLLLLQN 478
            IT   ++ +    T+DEA+ +++LF LD+HD  MPY+R+IN   + KTYA+RT+L L+ 
Sbjct: 233 KITADSLDLDG--YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLRE 290

Query: 479 DGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSH 538
           DGTLKP+AIELSLPH  GD   AVS+V  PA+ GVE ++W LAKAY  VNDS YHQL+SH
Sbjct: 291 DGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSH 350

Query: 539 W 539
           W
Sbjct: 351 W 351
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 Back     information, alignment and structure
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query555
d3bnea1 690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d2p0ma1 551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 100.0
d3bnea2143 Plant lipoxigenase {Soybean (Glycine max), isozyme 100.0
d2p0ma2111 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 98.69
d1olpa2121 Alpha-toxin, C-terminal domain {Clostridium absonu 98.63
d1ca1a2121 Alpha-toxin, C-terminal domain {Clostridium perfri 98.5
d1rp1a1113 Pancreatic lipase, C-terminal domain {Dog (Canis f 97.26
d1bu8a1114 Pancreatic lipase, C-terminal domain {Rat (Rattus 97.17
d1gpla1112 Pancreatic lipase, C-terminal domain {Guinea pig ( 96.1
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=3.8e-114  Score=957.18  Aligned_cols=361  Identities=58%  Similarity=0.981  Sum_probs=344.2

Q ss_pred             ccCCCChHhHHHHHHHHHhhhCCCCCCCcccCeEEeccccCCCCCCCCCCCCCcccCCCCCCCCCCCcCCCCCCCCCCCC
Q 008752          182 LPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDP  261 (555)
Q Consensus       182 LP~~tp~~L~~~Re~EL~~lRg~g~Gerk~~dRiYdydvYndlG~Pd~~~~~~RPvLGgs~~~PYPRR~RTGR~~~~~D~  261 (555)
                      ||++||++|+++||+||++|||||+||||+||||||||||||||+||++++++|||||||++|||||||||||+|+++||
T Consensus         1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp   80 (690)
T d3bnea1           1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP   80 (690)
T ss_dssp             CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCcccccCCCCccCcccccchhhchHHHHHHhhhhhHhhhcc--CCCCCCCCHHHHHHHhcCCCcCCCcccc
Q 008752          262 NSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFDDVLNLYEGGIKLPNSQTV  339 (555)
Q Consensus       262 ~~esr~~~~~~~~yvPrDE~Fs~~K~~~f~~~~lk~~~~~~~p~l~~~~~--~~~~~f~sf~di~~Ly~~~~~lp~~~~~  339 (555)
                      .+|||.+    .+||||||+|+++|+++|.++++|+++|.++|.|+++++  .+..+|+||+||++||++|+++|.+   
T Consensus        81 ~~e~r~~----~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~~---  153 (690)
T d3bnea1          81 NTEKQGE----VFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD---  153 (690)
T ss_dssp             TSBCCCS----SCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCHH---
T ss_pred             CcccCCC----CCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCchh---
Confidence            9999954    689999999999999999999999999999999999875  4568999999999999999998853   


Q ss_pred             chhccccchHHHHHhhhcccccccccCCchhhhhccccccCcHHHHHHHhcCCCcccccccccCCCCCCCCccccCCCCC
Q 008752          340 SKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHS  419 (555)
Q Consensus       340 ~~~~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~~~~~W~~D~eFgrQ~LaG~NP~~I~~~~~~P~~s~Ldp~~yg~~~~  419 (555)
                       .+.+.+|+++++++++++++.+||||+|+||++|+++|++|+|||||+|||+||++|++|++||++++||++.||++.+
T Consensus       154 -~~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s  232 (690)
T d3bnea1         154 -VISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSS  232 (690)
T ss_dssp             -HHHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCC
T ss_pred             -hhhhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchhh
Confidence             5677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccHHHHHhhcCCCcHHHHhhcCcEEEEcCCcccccccccccCCC-CccccceeEEEecCCCceeeEEEEecCCCCCCCC
Q 008752          420 SITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTN-TKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDH  498 (555)
Q Consensus       420 ~it~e~i~~~l~G~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~-~~~yAp~~Lffl~~dG~L~PIAIqL~~p~~~~~~  498 (555)
                      +||.++++  ++|+||++||++|||||+||||+++|++.++|... .+.|||+||||++++|+|+||||||+++++.++.
T Consensus       233 ~it~~~i~--l~G~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~  310 (690)
T d3bnea1         233 KITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDL  310 (690)
T ss_dssp             CCCGGGCC--CTTCCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCC
T ss_pred             hhhHhhhc--cCccHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCccc
Confidence            99999985  78999999999999999999999999999999865 4699999999999999999999999999887777


Q ss_pred             CCCCCeEEeCCCCCCCCcHHHHHHHHHHhcccchhHHHHHhhhccccceeeeee
Q 008752          499 HGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWCDIKKENIGWQLN  552 (555)
Q Consensus       499 ~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HQlisHllrTHlv~E~~~v~  552 (555)
                      .++.++||||+|+++++|.|+||||||++||++|||+|+||++||+++|||+|.
T Consensus       311 ~~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf~IA  364 (690)
T d3bnea1         311 SAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIA  364 (690)
T ss_dssp             CCCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHH
T ss_pred             CCCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHHHHH
Confidence            789999999999766689999999999999999999999999999999999984
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} Back     information, alignment and structure
>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Back     information, alignment and structure
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure