Citrus Sinensis ID: 008777

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550----
MRVNVDLFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
cccccccccccccccccccccccccccEEccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccEEEEEEccEEEEccHHHHHcccHHHHHHHccccccccccEEEEEEccccHHHHHHHHHccccccEEEccccHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHccccccHHccccHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccccEEEEEccccccccEEEEEEEccEEEEEEEcccccccccEEEcccEEEEEEEEEcccEEEEcccccccccccEEEEEEEEcccccccEEEEEEEEEEEEEccccccccccccEEEEEcccccccccccccccEEEEEccccEEEccEEEEEEEEEEcc
cccccccccccccccccccccccccccEEEEccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHcccccccccHccccccccccccEEEEEcccccccccccccHHHcccccccccccccEEEEEEEEcccHEEEEcccHHHHHHHcccccHccccEEEEEEccccHHHHHHHHHHHHccEEEEcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHccccccccccEEcccccccccEEEEEEccccccEEEEEcccHHHHHHHccccEEEEEEEEEccccEEEEEccccccccccEEEEEEEEEcccccEEEEEEEEEEEEccccccEEEcEcccEEEccccEcccccccccccHHHHcccccEHEccEEEEEEEEEEcc
mrvnvdlfdpqsnmdsdfssglpdsdfgfafndsnfsdrvlrieimpdlpdsksdgdacSSIADWARNRKRRREEIKKDTVDVLVQREQILqcnmpdtedgvayenqddepeamveespadvglnlkqceeatgnidpawsmdlSTVLRVKTVHisspilaakspFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYsstlstttpTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESAllyldlpssvlmadavqpLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVlasddlqiasEDAVYDFALKWARTHYPKLEERREILGSRLgrlirfpymTCRKLKKvltcndfdpelaSKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERaykyrpvkvvefelprqqcvVYLDLKreecahlfpagriysqafhlggqgfflsahcnmdqqssfhcfglflgmqekgsvSFAVDYEFaarikpteeyVSKYkgnytftggkavgyrnlfgipwtafmaddsiyfINGNLHLRAELTIRQ
mrvnvdlfdpqsnmdsdfsSGLPDSDFGFAFNDSNFSDRVLRIEIMpdlpdsksdgdacsSIADwarnrkrrreeikkdtvdvlVQREqilqcnmpdtedGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHIsspilaakspFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARthypkleerreilgsrlgrlirfpYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRalaaeeanstyRRFVERAYKYrpvkvvefelprQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAArikpteeyvskYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
MRVNVDLFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWArnrkrrreeikkDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYsstlstttptallDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
***************************GFAFNDSNFSDRVLRIEI**********************************TVDVLVQREQILQC*******************************NLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAEL****
***NVDLFDPQ***************FGFAFNDSNFSDRVLRIEIMPD***************************************************************************************IDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFK********************RFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIR*
MRVNVDLFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
******LFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDL*******************RKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPAD******************WSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
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MRVNVDLFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query554 2.2.26 [Sep-21-2011]
Q9FPW6561 BTB/POZ domain-containing yes no 0.980 0.967 0.753 0.0
O82343561 BTB/POZ domain-containing no no 0.978 0.966 0.748 0.0
O04615527 BTB/POZ domain-containing no no 0.935 0.982 0.572 1e-166
Q8NFY9 601 Kelch repeat and BTB doma yes no 0.341 0.314 0.272 2e-11
B1H285 575 Kelch repeat and BTB doma yes no 0.326 0.314 0.273 4e-11
Q3UQV5 599 Kelch repeat and BTB doma yes no 0.357 0.330 0.263 4e-11
Q6TDP4 642 Kelch-like protein 17 OS= no no 0.348 0.300 0.271 9e-11
O94889 574 Kelch-like protein 18 OS= no no 0.277 0.268 0.293 3e-10
Q8K430 640 Kelch-like protein 17 OS= no no 0.348 0.301 0.271 3e-10
Q6TDP3 640 Kelch-like protein 17 OS= no no 0.348 0.301 0.271 3e-10
>sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2 Back     alignment and function desciption
 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/559 (75%), Positives = 475/559 (84%), Gaps = 16/559 (2%)

Query: 4   NVDLFDPQSNMDSDFS--SGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSS 61
           N DLFDP++ MD DF+      D DFGFAFNDSNFSDR+LRIEIM    DS+S+ + C+S
Sbjct: 7   NTDLFDPKTQMDPDFTRHGSSSDGDFGFAFNDSNFSDRLLRIEIMGGPSDSRSEVEGCTS 66

Query: 62  IADWARNRKRRREEIKKD---TVDVLVQ--REQILQCNMPDTEDGVAYENQDDEP-EAMV 115
           IADWAR+RKRRRE+IKK+   T+  +V    EQIL    PD +     EN DDE  EAMV
Sbjct: 67  IADWARHRKRRREDIKKESGVTISDIVACPEEQILTDEQPDMDGCPGGENPDDEGGEAMV 126

Query: 116 EESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGM 175
           EE+       L   EE T + +P W MD STV+RVK +HISSPILAAKSPFFYKLFSNGM
Sbjct: 127 EEA-------LSGDEEETSS-EPNWGMDCSTVVRVKELHISSPILAAKSPFFYKLFSNGM 178

Query: 176 RESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCS 235
           RESEQR+VTLRI+ASEEAALMELLNFMYS+ +S TT  ALLDVLMAADKFEVASCMRYCS
Sbjct: 179 RESEQRHVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYCS 238

Query: 236 RLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLA 295
           RLLRN+PMT ESALLYL+LPSSVLMA AVQPLTD AKQFLAARYKDI+KF EEV++LPLA
Sbjct: 239 RLLRNMPMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVMSLPLA 298

Query: 296 GIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLK 355
           GIEA+L+SD+LQIASEDAVYDF LKWAR  YP LEERREILGSRL   IRFP+MTCRKLK
Sbjct: 299 GIEAILSSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMTCRKLK 358

Query: 356 KVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVE 415
           KVLTC+DF+ E+ASK+VLE+LFFKAE P+RQR+LA+EE+ S  RR +ERAYKYRPVKVVE
Sbjct: 359 KVLTCSDFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRPVKVVE 418

Query: 416 FELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF 475
           FELPR QCVVYLDLKREEC  LFP+GR+YSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF
Sbjct: 419 FELPRPQCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF 478

Query: 476 LGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADD 535
           LGMQEKGSVSF VDYEF+AR KP E+++SKYKGNYTFTGGKAVGYRNLFG+PWT+F+A+D
Sbjct: 479 LGMQEKGSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAED 538

Query: 536 SIYFINGNLHLRAELTIRQ 554
           S YFING LHLRAELTI++
Sbjct: 539 SQYFINGILHLRAELTIKR 557
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Arabidopsis thaliana (taxid: 3702)
>sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana GN=At2g46260 PE=2 SV=2 Back     alignment and function description
>sp|O04615|Y4116_ARATH BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana GN=At4g01160 PE=3 SV=1 Back     alignment and function description
>sp|Q8NFY9|KBTB8_HUMAN Kelch repeat and BTB domain-containing protein 8 OS=Homo sapiens GN=KBTBD8 PE=2 SV=2 Back     alignment and function description
>sp|B1H285|KBTB8_RAT Kelch repeat and BTB domain-containing protein 8 OS=Rattus norvegicus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q3UQV5|KBTB8_MOUSE Kelch repeat and BTB domain-containing protein 8 OS=Mus musculus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q6TDP4|KLH17_HUMAN Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1 Back     alignment and function description
>sp|O94889|KLH18_HUMAN Kelch-like protein 18 OS=Homo sapiens GN=KLHL18 PE=2 SV=3 Back     alignment and function description
>sp|Q8K430|KLH17_RAT Kelch-like protein 17 OS=Rattus norvegicus GN=Klhl17 PE=1 SV=1 Back     alignment and function description
>sp|Q6TDP3|KLH17_MOUSE Kelch-like protein 17 OS=Mus musculus GN=Klhl17 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query554
147798263526 hypothetical protein VITISV_008241 [Viti 0.947 0.998 0.835 0.0
225454420553 PREDICTED: BTB/POZ domain-containing pro 0.980 0.981 0.782 0.0
255541774549 atpob1, putative [Ricinus communis] gi|2 0.976 0.985 0.778 0.0
224127832547 predicted protein [Populus trichocarpa] 0.974 0.987 0.773 0.0
224064139556 predicted protein [Populus trichocarpa] 0.980 0.976 0.762 0.0
224072075561 predicted protein [Populus trichocarpa] 1.0 0.987 0.761 0.0
356573187553 PREDICTED: BTB/POZ domain-containing pro 0.978 0.980 0.768 0.0
356506034553 PREDICTED: BTB/POZ domain-containing pro 0.978 0.980 0.767 0.0
449432076553 PREDICTED: BTB/POZ domain-containing pro 0.980 0.981 0.756 0.0
307136357552 ATPOB protein binding [Cucumis melo subs 0.976 0.980 0.758 0.0
>gi|147798263|emb|CAN63457.1| hypothetical protein VITISV_008241 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  925 bits (2390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/536 (83%), Positives = 480/536 (89%), Gaps = 11/536 (2%)

Query: 19  SSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKK 78
           +  + DSDF FAFNDSNFSDR+LRIEI+ DLP+SK DG+ C+SIADWARNRKRRREEIKK
Sbjct: 2   AGSVSDSDFAFAFNDSNFSDRLLRIEIIADLPESKGDGEGCNSIADWARNRKRRREEIKK 61

Query: 79  DTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDP 138
           +    +   EQIL CNMPDTEDGVAYENQD+E  AM+EESP          +EA  + D 
Sbjct: 62  ENAVDVHHEEQILNCNMPDTEDGVAYENQDEEAVAMIEESPPG--------DEAGHSSDS 113

Query: 139 AWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMEL 198
           +W MD STVLRVKT+HISSPILAAKSPFFYKLFSNGMRESEQR+VTLRIHAS +      
Sbjct: 114 SWGMDCSTVLRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRIHASGKYTKTLS 173

Query: 199 LNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSV 258
           L F   +TLSTTTPTALLDVLMAADKFEVASCMRYCSR+LRNLPMTCESALLYLDLPSSV
Sbjct: 174 LFF---NTLSTTTPTALLDVLMAADKFEVASCMRYCSRMLRNLPMTCESALLYLDLPSSV 230

Query: 259 LMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFA 318
           LMA+AVQPLTD AKQFLA RYKD++KFQEEVLNLPLAGIEAVL+SDDLQ+ASEDAVYDF 
Sbjct: 231 LMAEAVQPLTDAAKQFLAGRYKDVTKFQEEVLNLPLAGIEAVLSSDDLQVASEDAVYDFV 290

Query: 319 LKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFF 378
           LKWAR HYPKLE+RREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD ELASKVVLE+LFF
Sbjct: 291 LKWARIHYPKLEDRREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDTELASKVVLEALFF 350

Query: 379 KAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLF 438
           KAE PYRQR+LAAEEA+S+YRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREEC +LF
Sbjct: 351 KAEAPYRQRSLAAEEASSSYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECLNLF 410

Query: 439 PAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKP 498
           PAGR+YSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSV+FAVDYEFAAR KP
Sbjct: 411 PAGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVTFAVDYEFAARSKP 470

Query: 499 TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ 554
           TEEYVSKYKGNYTFTGGKAVGYRNLFGI W AFMADDS YFING LHLRAELTIRQ
Sbjct: 471 TEEYVSKYKGNYTFTGGKAVGYRNLFGIAWXAFMADDSHYFINGILHLRAELTIRQ 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225454420|ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255541774|ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|223549131|gb|EEF50620.1| atpob1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224127832|ref|XP_002320175.1| predicted protein [Populus trichocarpa] gi|222860948|gb|EEE98490.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224064139|ref|XP_002301391.1| predicted protein [Populus trichocarpa] gi|222843117|gb|EEE80664.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224072075|ref|XP_002303620.1| predicted protein [Populus trichocarpa] gi|222841052|gb|EEE78599.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356573187|ref|XP_003554745.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|356506034|ref|XP_003521793.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|449432076|ref|XP_004133826.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] gi|449480287|ref|XP_004155851.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|307136357|gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query554
TAIR|locus:2082827561 POB1 "POZ/BTB containin G-prot 0.980 0.967 0.722 6.5e-209
TAIR|locus:2063026561 LRB1 "light-response BTB 1" [A 0.978 0.966 0.717 8.6e-207
UNIPROTKB|Q6TDP4 642 KLHL17 "Kelch-like protein 17" 0.348 0.300 0.276 3.5e-10
MGI|MGI:2678948 640 Klhl17 "kelch-like 17" [Mus mu 0.348 0.301 0.280 7.4e-10
RGD|708444 640 Klhl17 "kelch-like family memb 0.348 0.301 0.280 7.4e-10
UNIPROTKB|A4FV78 606 KBTBD10 "Uncharacterized prote 0.398 0.364 0.284 1.9e-09
UNIPROTKB|O60662 606 KLHL41 "Kelch-like protein 41" 0.398 0.364 0.280 1.9e-09
UNIPROTKB|F1PMV5 650 KBTBD10 "Uncharacterized prote 0.398 0.34 0.284 2.7e-09
MGI|MGI:2661430 599 Kbtbd8 "kelch repeat and BTB ( 0.342 0.317 0.264 6.4e-09
FB|FBgn0037978 575 KLHL18 [Drosophila melanogaste 0.342 0.330 0.255 1.7e-08
TAIR|locus:2082827 POB1 "POZ/BTB containin G-protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2020 (716.1 bits), Expect = 6.5e-209, P = 6.5e-209
 Identities = 404/559 (72%), Positives = 454/559 (81%)

Query:     4 NVDLFDPQSNMDSDFS--SGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSS 61
             N DLFDP++ MD DF+      D DFGFAFNDSNFSDR+LRIEIM    DS+S+ + C+S
Sbjct:     7 NTDLFDPKTQMDPDFTRHGSSSDGDFGFAFNDSNFSDRLLRIEIMGGPSDSRSEVEGCTS 66

Query:    62 IADWAXXXXXXXXXXXXD---TVDVLVQ--REQILQCNMPDTEDGVAYENQDDEP-EAMV 115
             IADWA            +   T+  +V    EQIL    PD +     EN DDE  EAMV
Sbjct:    67 IADWARHRKRRREDIKKESGVTISDIVACPEEQILTDEQPDMDGCPGGENPDDEGGEAMV 126

Query:   116 EESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKLFSNGM 175
             EE+       L   EE T + +P W MD STV+RVK +HISSPILAAKSPFFYKLFSNGM
Sbjct:   127 EEA-------LSGDEEETSS-EPNWGMDCSTVVRVKELHISSPILAAKSPFFYKLFSNGM 178

Query:   176 RESEQRYVTLRIHASEEAALMELLNFMYXXXXXXXXXXXXXDVLMAADKFEVASCMRYCS 235
             RESEQR+VTLRI+ASEEAALMELLNFMY             DVLMAADKFEVASCMRYCS
Sbjct:   179 RESEQRHVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYCS 238

Query:   236 RLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLA 295
             RLLRN+PMT ESALLYL+LPSSVLMA AVQPLTD AKQFLAARYKDI+KF EEV++LPLA
Sbjct:   239 RLLRNMPMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVMSLPLA 298

Query:   296 GIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLK 355
             GIEA+L+SD+LQIASEDAVYDF LKWAR  YP LEERREILGSRL   IRFP+MTCRKLK
Sbjct:   299 GIEAILSSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMTCRKLK 358

Query:   356 KVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVE 415
             KVLTC+DF+ E+ASK+VLE+LFFKAE P+RQR+LA+EE+ S  RR +ERAYKYRPVKVVE
Sbjct:   359 KVLTCSDFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRPVKVVE 418

Query:   416 FELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF 475
             FELPR QCVVYLDLKREEC  LFP+GR+YSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF
Sbjct:   419 FELPRPQCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLF 478

Query:   476 LGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADD 535
             LGMQEKGSVSF VDYEF+AR KP E+++SKYKGNYTFTGGKAVGYRNLFG+PWT+F+A+D
Sbjct:   479 LGMQEKGSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAED 538

Query:   536 SIYFINGNLHLRAELTIRQ 554
             S YFING LHLRAELTI++
Sbjct:   539 SQYFINGILHLRAELTIKR 557
GO:0005737 "cytoplasm" evidence=ISM
GO:0009954 "proximal/distal pattern formation" evidence=RCA
GO:0010227 "floral organ abscission" evidence=RCA
GO:0048439 "flower morphogenesis" evidence=RCA
GO:0005515 "protein binding" evidence=IPI
GO:0005634 "nucleus" evidence=IDA
GO:0010114 "response to red light" evidence=IGI
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0046982 "protein heterodimerization activity" evidence=IPI
TAIR|locus:2063026 LRB1 "light-response BTB 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6TDP4 KLHL17 "Kelch-like protein 17" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2678948 Klhl17 "kelch-like 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|708444 Klhl17 "kelch-like family member 17" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A4FV78 KBTBD10 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O60662 KLHL41 "Kelch-like protein 41" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PMV5 KBTBD10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2661430 Kbtbd8 "kelch repeat and BTB (POZ) domain containing 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0037978 KLHL18 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O82343Y2626_ARATHNo assigned EC number0.74820.97830.9661nono
Q9FPW6POB1_ARATHNo assigned EC number0.75310.98010.9679yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query554
smart0022597 smart00225, BTB, Broad-Complex, Tramtrack and Bric 3e-11
smart00875101 smart00875, BACK, BTB And C-terminal Kelch 4e-10
pfam07707101 pfam07707, BACK, BTB And C-terminal Kelch 4e-09
PHA03098 534 PHA03098, PHA03098, kelch-like protein; Provisiona 6e-08
pfam00651101 pfam00651, BTB, BTB/POZ domain 6e-07
>gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information 
 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 147 VLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLR-IHASEEAALMELLNFMY 203
            L V  K  H    +LAA SP+F  LFS+  +ES++  + L  +          LLNF+Y
Sbjct: 3   TLVVGGKKFHAHKAVLAAHSPYFKALFSSDFKESDKSEIYLDDVSPE---DFRALLNFLY 59

Query: 204 SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL 241
           +  L       + ++L  AD  ++   +  C   L  L
Sbjct: 60  TGKLD-LPEENVEELLELADYLQIPGLVELCEEFLLKL 96

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures. Length = 97
>gnl|CDD|197943 smart00875, BACK, BTB And C-terminal Kelch Back     alignment and domain information
>gnl|CDD|149006 pfam07707, BACK, BTB And C-terminal Kelch Back     alignment and domain information
>gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional Back     alignment and domain information
>gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 554
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PHA02790480 Kelch-like protein; Provisional 100.0
PHA03098534 kelch-like protein; Provisional 100.0
KOG4350 620 consensus Uncharacterized conserved protein, conta 99.97
KOG2075521 consensus Topoisomerase TOP1-interacting protein B 99.9
KOG4682488 consensus Uncharacterized conserved protein, conta 99.76
PF07707103 BACK: BTB And C-terminal Kelch; InterPro: IPR01170 99.72
PF00651111 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( 99.69
KOG4591280 consensus Uncharacterized conserved protein, conta 99.67
smart00875101 BACK BTB And C-terminal Kelch. The BACK domain is 99.64
KOG4441 571 consensus Proteins containing BTB/POZ and Kelch do 99.58
smart0022590 BTB Broad-Complex, Tramtrack and Bric a brac. Doma 99.57
KOG0783 1267 consensus Uncharacterized conserved protein, conta 99.5
PHA02713 557 hypothetical protein; Provisional 99.38
PHA02790480 Kelch-like protein; Provisional 99.16
PHA03098 534 kelch-like protein; Provisional 98.91
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 98.5
TIGR03547 346 muta_rot_YjhT mutatrotase, YjhT family. Members of 98.49
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 98.48
PLN02153341 epithiospecifier protein 98.45
PLN02193470 nitrile-specifier protein 98.44
PLN02153 341 epithiospecifier protein 98.4
PF1396450 Kelch_6: Kelch motif 98.4
PLN02193 470 nitrile-specifier protein 98.28
TIGR03548 323 mutarot_permut cyclically-permuted mutatrotase fam 98.25
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.23
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 98.12
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.09
PRK14131 376 N-acetylneuraminic acid mutarotase; Provisional 98.08
KOG0511516 consensus Ankyrin repeat protein [General function 98.03
KOG1987297 consensus Speckle-type POZ protein SPOP and relate 97.75
KOG2838401 consensus Uncharacterized conserved protein, conta 97.66
KOG2838401 consensus Uncharacterized conserved protein, conta 97.61
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.48
smart0061247 Kelch Kelch domain. 97.4
KOG2716230 consensus Polymerase delta-interacting protein PDI 97.23
PF0221494 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi 97.2
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 97.1
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 97.02
KOG3473112 consensus RNA polymerase II transcription elongati 96.62
KOG4693392 consensus Uncharacterized conserved protein, conta 96.57
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 96.5
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 96.33
PF1341549 Kelch_3: Galactose oxidase, central domain 96.23
PF1385442 Kelch_5: Kelch motif 95.95
smart00512104 Skp1 Found in Skp1 protein family. Family of Skp1 95.62
smart0061247 Kelch Kelch domain. 94.59
KOG4693 392 consensus Uncharacterized conserved protein, conta 94.57
KOG1665302 consensus AFH1-interacting protein FIP2, contains 94.35
KOG1724162 consensus SCF ubiquitin ligase, Skp1 component [Po 93.46
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 92.2
KOG2714465 consensus SETA binding protein SB1 and related pro 92.1
KOG1230 521 consensus Protein containing repeated kelch motifs 91.75
PF0393162 Skp1_POZ: Skp1 family, tetramerisation domain; Int 90.61
COG3055 381 Uncharacterized protein conserved in bacteria [Fun 89.04
cd03779147 MATH_TRAF1 Tumor Necrosis Factor Receptor (TNFR) A 88.85
KOG1778319 consensus CREB binding protein/P300 and related TA 88.81
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 88.7
KOG0511516 consensus Ankyrin repeat protein [General function 88.43
PF1396450 Kelch_6: Kelch motif 87.59
PF0146678 Skp1: Skp1 family, dimerisation domain; InterPro: 87.29
KOG1230 521 consensus Protein containing repeated kelch motifs 87.16
COG5201158 SKP1 SCF ubiquitin ligase, SKP1 component [Posttra 86.58
cd03781154 MATH_TRAF4 Tumor Necrosis Factor Receptor (TNFR)-A 85.08
PF1341549 Kelch_3: Galactose oxidase, central domain 84.61
cd03774139 MATH_SPOP Speckle-type POZ protein (SPOP) family, 84.26
cd03776147 MATH_TRAF6 Tumor Necrosis Factor Receptor (TNFR)-A 82.92
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=6.9e-65  Score=558.91  Aligned_cols=380  Identities=19%  Similarity=0.307  Sum_probs=353.0

Q ss_pred             ccccCCcchhhhHHHHHHHhcCCCCCCCcceeEEEEE--EEEEeehhhccccChHhHHhhcCCCcccCccEEEEecCCCC
Q 008777          114 MVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASE  191 (554)
Q Consensus       114 ~v~~~p~~~~~~l~~L~~~r~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yFramf~~~~~Es~~~~I~L~~~~v~  191 (554)
                      .....+.|...+++.|+.+|+     .+.+|||++.+  ++|+|||+||||+||||++||+++++|+.+++|.|.  +++
T Consensus        12 ~~~~~~~h~~~~l~~l~~lr~-----~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~--~v~   84 (571)
T KOG4441|consen   12 SEFTDPSHSKFLLQGLNELRE-----EGLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLE--GVD   84 (571)
T ss_pred             cccccHHHHHHHHHHHHHHHH-----hCCCceEEEEECCeeechHHHHHHhccHHHHHHhcCCcccccceEEEEe--cCC
Confidence            445678899999999999998     77899999999  589999999999999999999999999999999999  899


Q ss_pred             HHHHHHHHHHHhcCceecCchhhHHHHHHHhchhcccchHHHHhhhhcccccCcccHHHHHhccccchhhhchHHHHHHH
Q 008777          192 EAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTA  271 (554)
Q Consensus       192 ~~~f~~lL~fiYtg~l~i~~~~~v~~LL~aAd~l~i~~L~~~C~~~L~~l~l~~~n~~~il~lA~~~~~a~~~~~L~~~~  271 (554)
                      +.+++.+|+|+||+++.++. +||++||.+|++|||+.+++.|++||++ +++++||+.+..+|+.|    +|.+|.+.+
T Consensus        85 ~~~l~~ll~y~Yt~~i~i~~-~nVq~ll~aA~~lQi~~v~~~C~~fL~~-~l~~~Nclgi~~~a~~~----~~~~L~~~a  158 (571)
T KOG4441|consen   85 PETLELLLDYAYTGKLEISE-DNVQELLEAASLLQIPEVVDACCEFLES-QLDPSNCLGIRRFAELH----SCTELLEVA  158 (571)
T ss_pred             HHHHHHHHHHhhcceEEech-HhHHHHHHHHHHhhhHHHHHHHHHHHHh-cCCHHHHHHHHHHHHhc----CcHHHHHHH
Confidence            99999999999999999999 9999999999999999999999999999 99999999999999999    999999999


Q ss_pred             HHHHHHhhHhhhccchhhcCCChhhhhcccccCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhhcCCCCCCCCH
Q 008777          272 KQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTC  351 (554)
Q Consensus       272 ~~fi~~nf~~v~~~~~~fl~L~~~~l~~LL~sd~L~V~sE~~Vf~av~~Wi~~~~~~~~~R~~~l~~~Ll~~IRf~lls~  351 (554)
                      ..||.+||.++.+ +++|++||.+++..||++|+|+|.+|++||+++++|++||   .+.|+.++ +.|+++||||+|++
T Consensus       159 ~~~i~~~F~~v~~-~eefl~L~~~~l~~ll~~d~l~v~~E~~vf~a~~~Wv~~d---~~~R~~~~-~~ll~~vr~~ll~~  233 (571)
T KOG4441|consen  159 DEYILQHFAEVSK-TEEFLLLSLEELIGLLSSDDLNVDSEEEVFEAAMRWVKHD---FEEREEHL-PALLEAVRLPLLPP  233 (571)
T ss_pred             HHHHHHHHHHHhc-cHHhhCCCHHHHHhhccccCCCcCCHHHHHHHHHHHHhcC---HhhHHHHH-HHHHHhcCccCCCH
Confidence            9999999999999 9999999999999999999999999999999999999999   78899998 89999999999999


Q ss_pred             HHHhhhcccCCCC--ChHHHHHHHHHHhhhccCcccchhhcccccccccc-cceeceeeecc-------ccccccccccc
Q 008777          352 RKLKKVLTCNDFD--PELASKVVLESLFFKAETPYRQRALAAEEANSTYR-RFVERAYKYRP-------VKVVEFELPRQ  421 (554)
Q Consensus       352 ~~L~~~v~~~~l~--~~~~~~~l~eAl~~~~~~~~~q~~~~~~~t~~~pR-~~~~~~~~~~~-------~~~Ve~ydp~~  421 (554)
                      .+|.+.+...+++  .+.|++++.+|++||. .|.+++.+++++++  || ...+.+++.|+       .+.+|+|||.+
T Consensus       234 ~~l~~~v~~~~~~~~~~~c~~~l~ea~~~~~-~~~~~~~~~~~~t~--~r~~~~~~l~~vGG~~~~~~~~~~ve~yd~~~  310 (571)
T KOG4441|consen  234 QFLVEIVESEPLIKRDSACRDLLDEAKKYHL-LPQRRPVMQSPRTR--PRRSVSGKLVAVGGYNRQGQSLRSVECYDPKT  310 (571)
T ss_pred             HHHHHHHhhhhhhccCHHHHHHHHHHHHHhh-CcccCccccCCCcc--cCcCCCCeEEEECCCCCCCcccceeEEecCCc
Confidence            9999999988875  6899999999999999 88888888898887  46 34456666444       35789999999


Q ss_pred             ceeE--------------------------------------eeecCcCceeeccC--CCceeEEEEEECCcEEEEcccC
Q 008777          422 QCVV--------------------------------------YLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHC  461 (554)
Q Consensus       422 ~~w~--------------------------------------~~d~~~~~W~~l~p--~~r~~~~~~vl~g~lYviGG~~  461 (554)
                      +.|.                                      +|||..++|+.++|  .+|..+++++++|.||++||++
T Consensus       311 ~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~d  390 (571)
T KOG4441|consen  311 NEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFD  390 (571)
T ss_pred             CcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEeccc
Confidence            9998                                      39999999999998  9999999999999999999999


Q ss_pred             CCcccceEEEEE-----------------------------eeecccCCC-ccccccccccceeecc---CceeecCCCC
Q 008777          462 NMDQQSSFHCFG-----------------------------LFLGMQEKG-SVSFAVDYEFAARIKP---TEEYVSKYKG  508 (554)
Q Consensus       462 ~~~~~rs~~~y~-----------------------------~~gG~~~~~-~l~s~V~~~~~E~YdP---~W~~va~m~~  508 (554)
                      |...++++||||                             ++||.++.. .+.++      |||||   +|+.++||+.
T Consensus       391 g~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sv------e~YDP~t~~W~~~~~M~~  464 (571)
T KOG4441|consen  391 GEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSV------ECYDPETNTWTLIAPMNT  464 (571)
T ss_pred             cccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceE------EEEcCCCCceeecCCccc
Confidence            999999999998                             467877776 78886      99999   9999999999


Q ss_pred             ceeeeceeeecc
Q 008777          509 NYTFTGGKAVGY  520 (554)
Q Consensus       509 ~~~~~g~~~~g~  520 (554)
                      +|..+|++++++
T Consensus       465 ~R~~~g~a~~~~  476 (571)
T KOG4441|consen  465 RRSGFGVAVLNG  476 (571)
T ss_pred             ccccceEEEECC
Confidence            999999886554

>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] Back     alignment and domain information
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO) Back     alignment and domain information
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins Back     alignment and domain information
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>smart00875 BACK BTB And C-terminal Kelch Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>smart00512 Skp1 Found in Skp1 protein family Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only] Back     alignment and domain information
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd03779 MATH_TRAF1 Tumor Necrosis Factor Receptor (TNFR) Associated Factor (TRAF) family, TRAF1 subfamily, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link TNFRs and downstream kinase cascades resulting in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses Back     alignment and domain information
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03781 MATH_TRAF4 Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF4 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF4, including the Drosophila protein DTRAF1 Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>cd03774 MATH_SPOP Speckle-type POZ protein (SPOP) family, MATH domain; composed of proteins with similarity to human SPOP Back     alignment and domain information
>cd03776 MATH_TRAF6 Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF6 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF6, including the Drosophila protein DTRAF2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query554
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 2e-28
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 5e-27
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 4e-14
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 1e-12
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 1e-12
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 2e-12
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 4e-12
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 6e-12
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 7e-12
2vpk_A116 Myoneurin; transcription regulation, transcription 1e-11
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 2e-11
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 4e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-11
3b84_A119 Zinc finger and BTB domain-containing protein 48; 9e-11
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 2e-10
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 2e-10
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 4e-10
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 2e-09
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 4e-09
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 9e-09
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 3e-07
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 1e-04
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 Back     alignment and structure
 Score =  113 bits (286), Expect = 2e-28
 Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 23/213 (10%)

Query: 159 ILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEE----AALMELLNFMYSSTLSTTTPTA 214
           +LAA + +F  L S    ES    V +R  +SE       +  ++ +MY+  +  +T + 
Sbjct: 53  VLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSV 112

Query: 215 LLDVLMAADKFEVASCMRYCSR-LLRNL-PMTCESALLYLDLPSSVLMADA--VQPLTDT 270
             +VL  AD+F +     +C   L + L    C      + +     +A    +  L   
Sbjct: 113 -HEVLELADRFLLIRLKEFCGEFLKKKLHLSNC------VAI---HSLAHMYTLSQLALK 162

Query: 271 AKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLE 330
           A   +   +  + +  EE   LP   I   L+  ++ + SE+ +++  LKW +      E
Sbjct: 163 AADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQ-R--NAE 218

Query: 331 ERREILGSRLGRLIRFPYMTCRKLKKVLTCNDF 363
           ER       L +L+R   M    L + +     
Sbjct: 219 ERERYF-EELFKLLRLSQMKPTYLTRHVKPERL 250
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127 Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109 Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144 Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116 Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125 Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119 Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124 Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121 Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138 Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129 Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116 Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119 Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119 Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query554
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 100.0
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 100.0
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 99.97
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 99.95
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 99.92
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 99.89
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 99.89
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 99.89
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 99.88
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 99.88
3b84_A119 Zinc finger and BTB domain-containing protein 48; 99.88
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 99.88
2vpk_A116 Myoneurin; transcription regulation, transcription 99.87
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 99.87
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 99.87
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 99.85
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 99.85
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 99.85
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 99.83
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 99.81
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 99.73
2ast_A159 S-phase kinase-associated protein 1A; SCF-substrat 99.41
4ajy_C97 Transcription elongation factor B polypeptide 1; E 99.16
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.07
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.04
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.03
1fs1_B141 SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le 98.98
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 98.96
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 98.96
2xn4_A 302 Kelch-like protein 2; structural protein, cytoskel 98.94
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 98.93
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 98.93
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 98.91
2p1m_A160 SKP1-like protein 1A; F-BOX, leucine rich repeat, 98.91
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 98.9
2zwa_A 695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 98.86
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 98.82
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 98.68
2uvk_A 357 YJHT; unknown function, hypothetical protein, sial 98.33
1hv2_A99 Elongin C, ELC1; protein-peptide complex, signalin 98.31
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 98.23
2fnj_C96 Transcription elongation factor B polypeptide 1; b 98.21
3v7d_A169 Suppressor of kinetochore protein 1; WD 40 domain, 98.17
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 98.08
3drz_A107 BTB/POZ domain-containing protein KCTD5; potassium 98.06
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 97.85
1vcb_B112 Protein (elongin C); tumor suppressor, cancer, ubi 97.63
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 97.57
3drx_A202 BTB/POZ domain-containing protein KCTD5; golgi, gr 96.87
3kvt_A115 Potassium channel protein SHAW; tetramerization do 95.52
1s1g_A124 Potassium voltage-gated channel subfamily D membe; 94.92
1nn7_A105 Potassium channel KV4.2; teteramerization domain, 94.34
2nz0_B140 Potassium voltage-gated channel subfamily D membe; 94.06
1t1d_A100 Protein (potassium channel KV1.1); potassium chann 92.54
1lb6_A160 TNF receptor-associated factor 6; TRAF6-CD40 compl 80.29
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A Back     alignment and structure
Probab=100.00  E-value=4e-46  Score=377.10  Aligned_cols=248  Identities=20%  Similarity=0.333  Sum_probs=227.8

Q ss_pred             cCCcchhhhHHHHHHHhcCCCCCCCcceeEEEEEE-----EEEeehhhccccChHhHHhhcCCCcccCccEEEEec----
Q 008777          117 ESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVK-----TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRI----  187 (554)
Q Consensus       117 ~~p~~~~~~l~~L~~~r~~~~~~~~~~~DV~l~v~-----~f~aHr~ILaa~S~yFramf~~~~~Es~~~~I~L~~----  187 (554)
                      ..+.|...+++.|+++|+     .+.+|||+|.++     +|+|||+|||++|+||++||+++|+|+.+..|+|+.    
T Consensus        11 ~~~~h~~~ll~~l~~l~~-----~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~   85 (279)
T 3i3n_A           11 ECSSHCSELSWRQNEQRR-----QGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSE   85 (279)
T ss_dssp             ECTTHHHHHHHHHHHHHH-----HTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSST
T ss_pred             CCHhHHHHHHHHHHHHHh-----cCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEecccccc
Confidence            457889999999999998     668999999984     699999999999999999999999999999999862    


Q ss_pred             CCCCHHHHHHHHHHHhcCceecCchhhHHHHHHHhchhcccchHHHHhhhhcccccCcccHHHHHhccccchhhhchHHH
Q 008777          188 HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPL  267 (554)
Q Consensus       188 ~~v~~~~f~~lL~fiYtg~l~i~~~~~v~~LL~aAd~l~i~~L~~~C~~~L~~l~l~~~n~~~il~lA~~~~~a~~~~~L  267 (554)
                      +++++.+|+.+|+|||||++.++. +++.+|+.+|++|+++.|++.|+++|.+ .++++||+.++.+|+.|    ++..|
T Consensus        86 ~~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L  159 (279)
T 3i3n_A           86 PGPEPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMY----TLSQL  159 (279)
T ss_dssp             TCSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHT----TCHHH
T ss_pred             CCCCHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHc----CcHHH
Confidence            279999999999999999999998 8999999999999999999999999999 89999999999999999    99999


Q ss_pred             HHHHHHHHHHhhHhhhccchhhcCCChhhhhcccccCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhhcCCCCC
Q 008777          268 TDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFP  347 (554)
Q Consensus       268 ~~~~~~fi~~nf~~v~~~~~~fl~L~~~~l~~LL~sd~L~V~sE~~Vf~av~~Wi~~~~~~~~~R~~~l~~~Ll~~IRf~  347 (554)
                      .+.|.+||.+||.++.+ +++|++||.+.+..||++|+|+|.+|.+||+++++|++|+   +++|++++ ++||++||||
T Consensus       160 ~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~~r~~~~-~~ll~~VRf~  234 (279)
T 3i3n_A          160 ALKAADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EELFKLLRLS  234 (279)
T ss_dssp             HHHHHHHHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HHHHTTTH-HHHHTTSCGG
T ss_pred             HHHHHHHHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhcCCC
Confidence            99999999999999999 9999999999999999999999999999999999999999   88999998 8999999999


Q ss_pred             CCCHHHHhhhcccCCCC--ChHHHHHHHHHHhhhc
Q 008777          348 YMTCRKLKKVLTCNDFD--PELASKVVLESLFFKA  380 (554)
Q Consensus       348 lls~~~L~~~v~~~~l~--~~~~~~~l~eAl~~~~  380 (554)
                      +|++++|.+.++.+++.  .+.|++++.+|++||.
T Consensus       235 l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~  269 (279)
T 3i3n_A          235 QMKPTYLTRHVKPERLVANNEVCVKLVADAVERHA  269 (279)
T ss_dssp             GSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhcc
Confidence            99999999999888774  7899999999999998
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B Back     alignment and structure
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A Back     alignment and structure
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 Back     alignment and structure
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 Back     alignment and structure
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 Back     alignment and structure
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A Back     alignment and structure
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A Back     alignment and structure
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 554
d1r29a_122 d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB 3e-06
d1buoa_121 d.42.1.1 (A:) Promyelocytic leukaemia zinc finger 7e-05
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 147 VLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYS 204
           V+ V  +       +L A S  FY +F++ ++ +                   LL+FMY+
Sbjct: 29  VIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINL--DPEINPEGFNILLDFMYT 86

Query: 205 STLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 239
           S L       ++ V+  A   ++   +  C + ++
Sbjct: 87  SRL-NLREGNIMAVMATAMYLQMEHVVDTCRKFIK 120
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query554
d1r29a_122 B-cell lymphoma 6 (Bcl6) protein BTB domain {Human 99.89
d1buoa_121 Promyelocytic leukaemia zinc finger (PLZF) protein 99.89
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 98.58
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 98.52
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 97.54
d1hv2a_99 Elongin C {Baker's yeast (Saccharomyces cerevisiae 97.22
d2c9wc196 Elongin C {Human (Homo sapiens) [TaxId: 9606]} 97.22
d1nn7a_105 Potassium channel kv4.2 {Rat (Rattus norvegicus) [ 96.86
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 96.82
d3kvta_103 akv3.1 voltage-gated potassium channel {California 96.68
d1t1da_100 Shaker potassium channel {California sea hare (Apl 95.46
d1fs1b155 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 90.47
d1nexa170 Centromere DNA-binding protein complex Cbf3 subuni 88.04
d1nexa272 Centromere DNA-binding protein complex Cbf3 subuni 80.63
d1fs1b261 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 80.34
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.8e-24  Score=185.38  Aligned_cols=115  Identities=17%  Similarity=0.270  Sum_probs=106.6

Q ss_pred             CCcchhhhHHHHHHHhcCCCCCCCcceeEEEEE--EEEEeehhhccccChHhHHhhcCCCcccCccEEEEecCCCCHHHH
Q 008777          118 SPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAAL  195 (554)
Q Consensus       118 ~p~~~~~~l~~L~~~r~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yFramf~~~~~Es~~~~I~L~~~~v~~~~f  195 (554)
                      -|.|...+|+.|+++|+     .+.+|||+|.+  ++|+|||+|||++|+||++||.+++.|+.+..+.++  ++++++|
T Consensus         5 ~~~h~~~ll~~l~~l~~-----~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~e~~~~~~~~~--~v~~~~f   77 (122)
T d1r29a_           5 FTRHASDVLLNLNRLRS-----RDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDP--EINPEGF   77 (122)
T ss_dssp             CTTHHHHHHHHHHHHHH-----TTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCT--TSCHHHH
T ss_pred             cchHHHHHHHHHHHHHh-----cCCCeEEEEEECCEEEEEehHHhhhCCHHHHHHhccchhhhcceeeeec--ccCHHHH
Confidence            46788999999999998     66899999999  689999999999999999999999998887766655  8999999


Q ss_pred             HHHHHHHhcCceecCchhhHHHHHHHhchhcccchHHHHhhhhcc
Q 008777          196 MELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN  240 (554)
Q Consensus       196 ~~lL~fiYtg~l~i~~~~~v~~LL~aAd~l~i~~L~~~C~~~L~~  240 (554)
                      +.+|+|+|||++.++. +++.+++.+|++|+++.|++.|.+||++
T Consensus        78 ~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~~  121 (122)
T d1r29a_          78 NILLDFMYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA  121 (122)
T ss_dssp             HHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred             HHHHhhhcCCeecCch-hhHHHHHHHHHHHCcHHHHHHHHHHHHh
Confidence            9999999999999998 8999999999999999999999999975
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nexa2 d.42.1.1 (A:4-103) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure