Citrus Sinensis ID: 008826
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 552 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SFU3 | 532 | Purple acid phosphatase 1 | yes | no | 0.914 | 0.949 | 0.765 | 0.0 | |
| O48840 | 545 | Purple acid phosphatase 1 | no | no | 0.932 | 0.944 | 0.556 | 1e-164 | |
| Q6TPH1 | 458 | Purple acid phosphatase 2 | no | no | 0.793 | 0.956 | 0.594 | 1e-155 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.666 | 0.847 | 0.384 | 6e-81 | |
| Q9LJU7 | 437 | Purple acid phosphatase 1 | no | no | 0.664 | 0.839 | 0.385 | 4e-77 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.664 | 0.839 | 0.369 | 6e-77 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.668 | 0.864 | 0.374 | 9e-74 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.586 | 0.696 | 0.378 | 7e-65 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.717 | 0.846 | 0.338 | 1e-64 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | no | no | 0.715 | 0.842 | 0.352 | 1e-63 |
| >sp|Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/508 (76%), Positives = 445/508 (87%), Gaps = 3/508 (0%)
Query: 33 NIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSIWI 92
+IPSTLDGPF P TVP D SLRG A+D+PDTDP VRRRV GFEPEQ+S+SLS +HDSIW+
Sbjct: 21 SIPSTLDGPFVPVTVPLDTSLRGQAIDLPDTDPRVRRRVIGFEPEQISLSLSSDHDSIWV 80
Query: 93 TWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152
+WITGEFQIG +KPLDP ++ S V++GT R +L+HEA GHSLVY QLYPF+GL NYTSG
Sbjct: 81 SWITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGLLNYTSG 140
Query: 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYN 212
IIHHVR+TGL+P+ YYY+CGDPS AMS +++FRT+P S P SYP RIA+VGDLGLTYN
Sbjct: 141 IIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTYN 200
Query: 213 TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272
TT TI+H+ N PDL+LL+GDV+YANLYLTNGT SDCYSCSF +TPIHETYQPRWDYWGR
Sbjct: 201 TTDTISHLIHNSPDLILLIGDVSYANLYLTNGTSSDCYSCSFPETPIHETYQPRWDYWGR 260
Query: 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHF 332
FM+NL SKVP+MV+EGNHEIE QA N+TF AYSSRFAFP ESGS S+ YYSFNAGGIHF
Sbjct: 261 FMENLTSKVPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSFNAGGIHF 320
Query: 333 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 392
+MLGAYI+YDKS QY+WL+KDLA VDRSVTPWLVA+WHPPWYSSY++HYREAECM+ M
Sbjct: 321 VMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAECMKEAM 380
Query: 393 EALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGN 452
E LLYSYG DIVFNGHVHAYERSNRV+NY LDPCGPV+I IGDGGN EKM+I HAD+PG
Sbjct: 381 EELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDPGK 440
Query: 453 CPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALW 512
CPEP +TPDP MGGFCA NFT + KFCWDRQPDYSA RESSFGHGILE+KNETWALW
Sbjct: 441 CPEPLTTPDPVMGGFCAWNFT---PSDKFCWDRQPDYSALRESSFGHGILEMKNETWALW 497
Query: 513 TWHRNQDSNNKVGDQIYIVRQPDKCPFH 540
TW+RNQDS+++VGDQIYIVRQPD+CP H
Sbjct: 498 TWYRNQDSSSEVGDQIYIVRQPDRCPLH 525
|
Acid phosphatase activity with p-nitrophenyl phosphate (pNPP), D-myoinositol 1-phosphate (Ins(1)P1), phytic acid and Myo-inositol hexakisphosphate. Low or no activity with Glc-6-P and ATP. Confers shoot growth stimulation, enhanced salt and osmotic stress tolerance, and ABA insensitivity. May modulate ascorbic acid (AsA) levels by controlling the input of myoinositol into this branch of AsA biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|O48840|PPA13_ARATH Purple acid phosphatase 13 OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 299/537 (55%), Positives = 361/537 (67%), Gaps = 22/537 (4%)
Query: 17 FFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE- 75
FF+ S + I PSTLDGP P T P D +L A D+P++DP + ++ F
Sbjct: 11 FFVIFASTVTIIV--HGFPSTLDGPLNPVTAPLDPNLNPIAFDLPESDPSFVKPISEFLL 68
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGD-NIKPLDPKTVASFVRYGT--SRTNLNHEATG 132
PEQ+SVSLS++ DS+WI+W+TGE+QIG+ + PLDP V S V+Y R ATG
Sbjct: 69 PEQISVSLSYSFDSVWISWVTGEYQIGEKDSAPLDPNCVQSIVQYREFDVRRTRKQNATG 128
Query: 133 HSLVYDQLYPFE-GLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPA 191
HS+VY+Q Y E G NYTSGIIHHV+LTGL+PN Y YQCGDPS+ AMS YYFRT+P
Sbjct: 129 HSIVYNQQYSSENGFMNYTSGIIHHVQLTGLKPNTLYRYQCGDPSLSAMSKEYYFRTMPK 188
Query: 192 SGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS 251
S ++YP RI + GDLGLTYNT+ + H+ SN PDLV+L+G +YA+ YL N T DC S
Sbjct: 189 STSENYPHRIVVAGDLGLTYNTSTVLGHILSNHPDLVVLLGGFSYADTYLANKTKLDCSS 248
Query: 252 CSFSKTPIH----------ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ-T 300
C + ETYQPRWDYWGRFM+ L + VP M+V G HEIE Q N T
Sbjct: 249 CHCDQNGTSSDCGSCYSSGETYQPRWDYWGRFMEPLTANVPTMMVAGEHEIEPQTENNLT 308
Query: 301 FVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDR 360
F AYSSRFAFPS ESGS S YYSFNAGG HFI+L +Y YD S QY WLE DL ++R
Sbjct: 309 FAAYSSRFAFPSNESGSFSPLYYSFNAGGAHFIVLNSYTLYDNSSDQYIWLESDLIKINR 368
Query: 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN 420
S TPW+VATW PWYS++ HYREAE MR+ +E LLY+Y VDIVFN HV AYERSNRV+N
Sbjct: 369 SETPWVVATWSLPWYSTFKGHYREAESMRIHLEDLLYNYRVDIVFNSHVDAYERSNRVYN 428
Query: 421 YTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGK 480
YTLD CGPV+IT G GG K+ H D+PGN P+PS G N T P +
Sbjct: 429 YTLDQCGPVYITTGAGG-AGKLETQHVDDPGNIPDPSQNYSCRSSGL---NSTLEPVKDE 484
Query: 481 FCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKC 537
C +QP+YSA+RESSFG GILEVKNET ALW+W+RNQD D I+IVRQP+ C
Sbjct: 485 TCPVKQPEYSAYRESSFGFGILEVKNETHALWSWNRNQDLYYLAADVIHIVRQPEMC 541
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 547 bits (1409), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/441 (59%), Positives = 328/441 (74%), Gaps = 3/441 (0%)
Query: 15 FLFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRR-VTG 73
L I L S + A IP+TLDGPF+P T ++ SLR + D+P P +R+R V+
Sbjct: 3 LLIMITLTSISLLLAAAETIPTTLDGPFKPLTRRFEPSLRRGSDDLPMDHPRLRKRNVSS 62
Query: 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGH 133
PEQ++++LS S+W++W+TG+ +G ++KPLDP ++AS V YG + N + G+
Sbjct: 63 DFPEQIALALS-TPTSMWVSWVTGDAIVGKDVKPLDPSSIASEVWYGKEKGNYMLKKKGN 121
Query: 134 SLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASG 193
+ VY QLYP +GL NYTSGIIHHV + GLEP +YYY+CGD S+PAMS+ F TLP
Sbjct: 122 ATVYSQLYPSDGLLNYTSGIIHHVLIDGLEPETRYYYRCGDSSVPAMSEEISFETLPLPS 181
Query: 194 PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLT-NGTGSDCYSC 252
+YP RIA VGDLGLT NTT TI+H+ N+P LV++VGD+TYAN Y T G G C+SC
Sbjct: 182 KDAYPHRIAFVGDLGLTSNTTTTIDHLMENDPSLVIIVGDLTYANQYRTIGGKGVPCFSC 241
Query: 253 SFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPS 312
SF PI ETYQPRWD WGRFM+ L SKVP MV+EGNHEIE QA TF +YS RFA P+
Sbjct: 242 SFPDAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIEPQASGITFKSYSERFAVPA 301
Query: 313 EESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHP 372
ESGS S+ YYSF+AGG+HF+MLGAY+ Y+ +G QY WL++DL+ VDR+VTPWLVAT HP
Sbjct: 302 SESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVTPWLVATMHP 361
Query: 373 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHIT 432
PWY+SYSSHY+E ECMR EME LLY Y VDIVF GHVHAYER NR++NYTLDPCGPV+IT
Sbjct: 362 PWYNSYSSHYQEFECMRQEMEELLYQYRVDIVFAGHVHAYERMNRIYNYTLDPCGPVYIT 421
Query: 433 IGDGGNLEKMSITHADEPGNC 453
IGDGGN+EK+ + AD+PG C
Sbjct: 422 IGDGGNIEKVDVDFADDPGKC 442
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Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 246/458 (53%), Gaps = 90/458 (19%)
Query: 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHS 134
+P+Q+ +SL+ D + +T+IT + V S V YG + +ATG
Sbjct: 46 DPQQVHISLA-GKDHMRVTFIT------------EDNKVESVVEYGKQPGKYDGKATGEC 92
Query: 135 LVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGP 194
Y + Y SG IHHV++ L+ N YYY+CG P S F+T P++
Sbjct: 93 TSYKYFF-------YKSGKIHHVKIGPLQANTTYYYRCGGNG-PEFS----FKTPPST-- 138
Query: 195 QSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSF 254
+P AIVGDLG T T T++H++S + D+ LL GD++YA+
Sbjct: 139 --FPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYAD---------------- 180
Query: 255 SKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGNQTFVAYSSRFAFPS 312
T+QP WD +GR ++ L SK P MV EGNHEIE + TF +Y++R+ P
Sbjct: 181 -------THQPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPH 233
Query: 313 EESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHP 372
ES S S+ YYSF+ G+H +MLG+Y +D QY+WL+ DLA VDR TPW+V H
Sbjct: 234 TESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHA 293
Query: 373 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHIT 432
PWY++ +H E E MR ME+LL++ VD+VF+GHVHAYER RV+N DPCGP+HIT
Sbjct: 294 PWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHIT 353
Query: 433 IGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAF 492
IGDGGN E ++++ P E F
Sbjct: 354 IGDGGNREGLALSFKKPPSPLSE------------------------------------F 377
Query: 493 RESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 530
RESSFGHG L+V + A W+WHRN DSN+ + D++++
Sbjct: 378 RESSFGHGRLKVMDGKRAHWSWHRNNDSNSLLADEVWL 415
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 176/456 (38%), Positives = 239/456 (52%), Gaps = 89/456 (19%)
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
PEQ+ +SL+ + + +TW+T + K+ SFV YGTS ++ G S
Sbjct: 47 PEQVHISLAGD-KHMRVTWVTND------------KSSPSFVEYGTSPGKYSYLGQGEST 93
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
Y + Y SG IHH + LE + YYY+CG ++ +T PA
Sbjct: 94 SYSYIM-------YRSGKIHHTVIGPLEADTVYYYRCG-----GEGPEFHLKTPPAQ--- 138
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
+P A+ GDLG T T T++H+ + + LL GD++YA+
Sbjct: 139 -FPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYM--------------- 182
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEE 314
Q +WD +G +Q L S P MV +GNHE E+ FV+++SR+ P EE
Sbjct: 183 --------QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEE 234
Query: 315 SGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPW 374
SGS S+ YYSF G+H IMLG+Y YD+ QY WL+ DL+ VDR TPWL+ +H PW
Sbjct: 235 SGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPW 294
Query: 375 YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434
Y+S ++H E + M EME LLY+ GVDIVF GHVHAYER+ RV N DPCGPVHITIG
Sbjct: 295 YNSNNAHQHEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIG 354
Query: 435 DGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRE 494
DGGN E ++ + D PS P++S FRE
Sbjct: 355 DGGNREGLARKYKD-------PS-----------------------------PEWSVFRE 378
Query: 495 SSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 530
+SFGHG L++ N T ALWTWHRN D D++++
Sbjct: 379 ASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWL 414
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 288 bits (738), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 234/457 (51%), Gaps = 90/457 (19%)
Query: 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGH 133
F P+Q+ +SL+ D + +T+ T D VAS V YG + + G
Sbjct: 49 FYPQQVHISLA-GKDHMRVTYTT------------DDLNVASMVEYGKHPKKYDKKTAGE 95
Query: 134 SLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASG 193
S Y + Y SG IHHV++ L+PN KYYY+CG D + F+T P+
Sbjct: 96 STSYTYFF-------YNSGKIHHVKIGPLKPNTKYYYRCG-----GHGDEFSFKTPPSK- 142
Query: 194 PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 253
+P A+ GDLG T T T++ + + D+ LL GD++YA
Sbjct: 143 ---FPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYA---------------- 183
Query: 254 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ--TFVAYSSRFAFP 311
+T+QP WD +GR ++ L S P MV EGNHEIE+ N +F +Y++R+ P
Sbjct: 184 -------DTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMP 236
Query: 312 SEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWH 371
ES S S+ YYSF+ G+H +MLG+Y Y+ QY WL+ DL VDR TPWLV H
Sbjct: 237 HAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMH 296
Query: 372 PPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431
PWYS+ +HY E E MR +E+LLY VD+VF GHVH YER ++N DPCGP++I
Sbjct: 297 TPWYSTNKAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYI 356
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
TIGDGGN E +++ +F + P S
Sbjct: 357 TIGDGGNREGLAL-----------------------------------RFKKPQSP-LSE 380
Query: 492 FRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQI 528
FRESSFGHG L + + A W+WHRN D + + D++
Sbjct: 381 FRESSFGHGRLRIIDHKRAHWSWHRNNDEMSSIADEV 417
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 233/459 (50%), Gaps = 90/459 (19%)
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
P+Q+ +SL D + I+WIT +++ V YGT A G S
Sbjct: 44 PDQVHISL-VGPDKMRISWIT-------------QSSISPSVVYGTVSGKYEGSANGTSS 89
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
Y L Y SG I+ V + L+PN YYY+CG PS + + FRT P+
Sbjct: 90 SYHYLLI------YRSGQINDVVIGPLKPNTVYYYKCGGPS---STQEFSFRTPPSK--- 137
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
+P + A+ GDLG + + T+ H+S + D+ +L GD++YAN+Y
Sbjct: 138 -FPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMY--------------- 181
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ--AGNQTFVAYSSRFAFPSE 313
QP WD +GR +Q L S+ P MV GNHE+E + F AY+ R+ P E
Sbjct: 182 --------QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFE 233
Query: 314 ESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPP 373
ESGS S+ YYSFN G+H IMLG+Y ++ QY+WLE +L +DR TPW+VA H P
Sbjct: 234 ESGSSSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAP 293
Query: 374 WYSSYSSHYREAEC--MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431
WY+S +H E E M+ ME LLY VD+VF GHVHAYER +RV+ D CGPV+I
Sbjct: 294 WYNSNEAHQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYI 353
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
IGDGGNLE ++ + D P+ S
Sbjct: 354 NIGDGGNLEGLATKYRDP------------------------------------NPEISL 377
Query: 492 FRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 530
FRE+SFGHG L V+N T A W WHRN D + D +++
Sbjct: 378 FREASFGHGQLVVENATHARWEWHRNDDDVSVEKDSVWL 416
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 204/399 (51%), Gaps = 75/399 (18%)
Query: 148 NYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDL 207
NYTSG IHH + LE N KYYY+ G I + ++F T P GP P ++GDL
Sbjct: 110 NYTSGYIHHCTIRNLEYNTKYYYEVG---IGNTTRSFWFTTPPEVGPDV-PYTFGLIGDL 165
Query: 208 GLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265
G ++++ T+ H N + VL VGD++YA+ Y P H+
Sbjct: 166 GQSFDSNRTLTHYERNPIKGQAVLFVGDLSYADNY-----------------PNHDNV-- 206
Query: 266 RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ---AGNQTFVAYSSRFAFPSEESGSLSSFY 322
RWD WGRF++ + P + GNHEI+ + F ++ R+ P + SGS +F+
Sbjct: 207 RWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPFTKRYHVPYKASGSTETFW 266
Query: 323 YSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY 382
Y + I+L +Y +Y K QYKWLE++L V+R+ TPWL+ H PWY+SY+ HY
Sbjct: 267 YPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHY 326
Query: 383 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLD-----------PCGPVHI 431
E E MRV E + VD+VF GHVHAYERS RV N D PV+I
Sbjct: 327 MEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYDIVNGKCTPVRDQSAPVYI 386
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
TIGDGGNLE + ATN T D QP+YSA
Sbjct: 387 TIGDGGNLEGL--------------------------ATNMT----------DPQPEYSA 410
Query: 492 FRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 530
FRE+SFGH L++KN T A ++WHRNQD D +++
Sbjct: 411 FREASFGHATLDIKNRTHAYYSWHRNQDGYAVEADSMWV 449
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 230/491 (46%), Gaps = 95/491 (19%)
Query: 57 AVDIPDTDPLVRRRVTGFEPEQLSVSL-SFNHDSIWITWITGEFQIGDNIKPLDPKTVAS 115
VD+P + R P+Q+ ++ ++ ++W+T E + G N
Sbjct: 40 TVDMPLDSDVFRVPCGYNAPQQVHITQGDVEGKAVIVSWVTQEAK-GSNK---------- 88
Query: 116 FVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDP 175
V Y + H+A G + Y NYTSG IHH + LE + KYYY G
Sbjct: 89 -VIYWKENSTKKHKAHGKTNTYK-------FYNYTSGFIHHCPIRNLEYDTKYYYVLG-- 138
Query: 176 SIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGD 233
+ ++F T P GP P ++GDLG +Y++ T+ H +N + VL VGD
Sbjct: 139 -VGQTERKFWFFTPPEIGPDV-PYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGD 196
Query: 234 VTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293
++YA+ Y P H+ RWD WGRF + + P + GNHE++
Sbjct: 197 ISYADTY-----------------PDHD--NRRWDSWGRFAERSTAYQPWIWTTGNHELD 237
Query: 294 AQ---AGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKW 350
N+ F ++ R+ P SGS F+YS G + I+L +Y +Y K QY+W
Sbjct: 238 FAPEIGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQW 297
Query: 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
LE++ V+R+ TPWL+ H PWY+SY HY E E MRV EA Y VD+VF GHVH
Sbjct: 298 LEEEFPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVH 357
Query: 411 AYERSNRVFNYTL-----------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSST 459
AYERS RV N D PV+ITIGDGGN+E ++ T EP
Sbjct: 358 AYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLA-TKMTEP--------- 407
Query: 460 PDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQD 519
QP YSAFRE+SFGH I +KN T A + WHRN D
Sbjct: 408 --------------------------QPKYSAFREASFGHAIFSIKNRTHAHYGWHRNHD 441
Query: 520 SNNKVGDQIYI 530
GD+++
Sbjct: 442 GYAVEGDRMWF 452
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 249/508 (49%), Gaps = 113/508 (22%)
Query: 53 LRGNAVDIPDTDPLVRRRVTGFE-------PEQLSVSLSFNHDS--IWITWITGEFQIGD 103
+RG+ D+PD PL FE P+Q+ V+ NH+ + I+W+T
Sbjct: 35 VRGS--DLPDDMPL---DSDVFEVPPGPNSPQQVHVTQG-NHEGNGVIISWVT------- 81
Query: 104 NIKPLDP--KTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTG 161
P+ P KTV + SR EAT ++ + NYTSG IHH +
Sbjct: 82 ---PVKPGSKTVQYWCENEKSRKQA--EATVNTYRF---------FNYTSGYIHHCLIDD 127
Query: 162 LEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINH-- 219
LE + KYYY+ G S ++F P SGP P ++GDLG TY++ T++H
Sbjct: 128 LEFDTKYYYEIGSGK---WSRRFWFFIPPKSGPDV-PYTFGLIGDLGQTYDSNSTLSHYE 183
Query: 220 MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 279
M+ + VL VGD++YA+ Y P H+ RWD WGRF++ V+
Sbjct: 184 MNPGKGQAVLFVGDLSYADRY-----------------PNHDN--NRWDTWGRFVERSVA 224
Query: 280 KVPIMVVEGNHEIE--AQAGN-QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLG 336
P + GNHEI+ G + F + +R+ P + SGS+S +YS + I++
Sbjct: 225 YQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSISPLWYSIKRASAYIIVMS 284
Query: 337 AYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 396
Y SY QYKWLEK+L V+R+ TPWL+ H P+YSSY HY E E +RV E
Sbjct: 285 CYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWF 344
Query: 397 YSYGVDIVFNGHVHAYERSNRVFNYTL-----------DPCGPVHITIGDGGNLEKMSIT 445
Y VD+VF GHVHAYERS RV N D P++ITIGDGGN E + +T
Sbjct: 345 VKYKVDVVFAGHVHAYERSERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGL-LT 403
Query: 446 HADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVK 505
+P QP YSAFRE+SFGHG+LE+K
Sbjct: 404 DMMQP-----------------------------------QPKYSAFREASFGHGLLEIK 428
Query: 506 NETWALWTWHRNQDSNNKVGDQIYIVRQ 533
N T A ++W+RNQD N D ++++ +
Sbjct: 429 NRTHAYFSWNRNQDGNAVAADSVWLLNR 456
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 552 | ||||||
| 351722194 | 547 | phytase precursor [Glycine max] gi|13925 | 0.923 | 0.932 | 0.803 | 0.0 | |
| 304421388 | 547 | phytase [Glycine max] | 0.923 | 0.932 | 0.801 | 0.0 | |
| 255554090 | 566 | acid phosphatase, putative [Ricinus comm | 0.947 | 0.924 | 0.774 | 0.0 | |
| 356569147 | 582 | PREDICTED: purple acid phosphatase 15-li | 0.951 | 0.902 | 0.780 | 0.0 | |
| 224141249 | 542 | predicted protein [Populus trichocarpa] | 0.967 | 0.985 | 0.770 | 0.0 | |
| 225469592 | 540 | PREDICTED: purple acid phosphatase 15 [V | 0.947 | 0.968 | 0.772 | 0.0 | |
| 147798298 | 540 | hypothetical protein VITISV_037278 [Viti | 0.947 | 0.968 | 0.772 | 0.0 | |
| 189311132 | 547 | phytase [Glycine max] | 0.923 | 0.932 | 0.798 | 0.0 | |
| 255560127 | 566 | acid phosphatase, putative [Ricinus comm | 0.954 | 0.931 | 0.791 | 0.0 | |
| 118486309 | 555 | unknown [Populus trichocarpa] | 0.914 | 0.909 | 0.795 | 0.0 |
| >gi|351722194|ref|NP_001235188.1| phytase precursor [Glycine max] gi|13925771|gb|AAK49438.1| phytase [Glycine max] gi|297718790|gb|ADI50286.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/510 (80%), Positives = 461/510 (90%)
Query: 31 NANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSI 90
+ +IPSTL+GPF+P TVP+D +LRG AVD+P+TDP VRRRV GFEPEQ+SVSLS +HDS+
Sbjct: 27 HCHIPSTLEGPFDPVTVPFDPALRGVAVDLPETDPRVRRRVRGFEPEQISVSLSTSHDSV 86
Query: 91 WITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150
WI+W+TGEFQIG +IKPLDPKTV+S V+YGTSR L HEA G SL+Y+QLYPFEGLQNYT
Sbjct: 87 WISWVTGEFQIGLDIKPLDPKTVSSVVQYGTSRFELVHEARGQSLIYNQLYPFEGLQNYT 146
Query: 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLT 210
SGIIHHV+L GLEP+ YYYQCGDPS+ AMSD+YYFRT+P SG +SYP ++A+VGDLGLT
Sbjct: 147 SGIIHHVQLKGLEPSTLYYYQCGDPSLQAMSDIYYFRTMPISGSKSYPGKVAVVGDLGLT 206
Query: 211 YNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270
YNTT TI H++SNEPDL+LL+GDVTYANLYLTNGTGSDCYSCSF TPIHETYQPRWDYW
Sbjct: 207 YNTTTTIGHLTSNEPDLLLLIGDVTYANLYLTNGTGSDCYSCSFPLTPIHETYQPRWDYW 266
Query: 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGI 330
GRFMQNLVS VPIMVVEGNHEIE QA N+TFVAYSSRFAFPS+ESGS S+FYYSFNAGGI
Sbjct: 267 GRFMQNLVSNVPIMVVEGNHEIEKQAENRTFVAYSSRFAFPSQESGSSSTFYYSFNAGGI 326
Query: 331 HFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390
HFIMLGAYI+YDK+ QYKWLE+DL NVDRS+TPWLV TWHPPWYSSY +HYREAECMRV
Sbjct: 327 HFIMLGAYINYDKTAEQYKWLERDLENVDRSITPWLVVTWHPPWYSSYEAHYREAECMRV 386
Query: 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEP 450
EME LLY+YGVDI+FNGHVHAYERSNRV+NY LDPCGPV+IT+GDGGN EKM+I ADEP
Sbjct: 387 EMEDLLYAYGVDIIFNGHVHAYERSNRVYNYNLDPCGPVYITVGDGGNREKMAIKFADEP 446
Query: 451 GNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWA 510
G+CP+P STPDPYMGGFCATNFT G KFCWDRQPDYSAFRESSFG+GILEVKNETWA
Sbjct: 447 GHCPDPLSTPDPYMGGFCATNFTFGTKVSKFCWDRQPDYSAFRESSFGYGILEVKNETWA 506
Query: 511 LWTWHRNQDSNNKVGDQIYIVRQPDKCPFH 540
LW+W+RNQDS +VGDQIYIVRQPD CP H
Sbjct: 507 LWSWYRNQDSYKEVGDQIYIVRQPDICPIH 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|304421388|gb|ADM32493.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/510 (80%), Positives = 460/510 (90%)
Query: 31 NANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSI 90
+ +IPSTL+GPF+P TVP+D +LRG AVD+P+TDP VRRRV GFEPEQ+SVSLS +HDS+
Sbjct: 27 HCHIPSTLEGPFDPVTVPFDPALRGVAVDLPETDPRVRRRVRGFEPEQISVSLSTSHDSV 86
Query: 91 WITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150
WI+W+TGEFQIG +IKPLDPKTV+S V+YGTSR L HEA G SL+Y+QLYPFEGLQNYT
Sbjct: 87 WISWVTGEFQIGLDIKPLDPKTVSSVVQYGTSRFELVHEARGQSLIYNQLYPFEGLQNYT 146
Query: 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLT 210
SGIIHHV+L GLEP+ YYYQCGDPS+ AMSD+YYFRT+P SG +SYP ++A+VGDLGLT
Sbjct: 147 SGIIHHVQLKGLEPSTLYYYQCGDPSLQAMSDIYYFRTMPISGSKSYPGKVAVVGDLGLT 206
Query: 211 YNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270
YNTT TI H++SNEPDL+LL+GDVTYANLYLTNGTGSDCYSCSF TPIHETYQPRWDYW
Sbjct: 207 YNTTTTIGHLTSNEPDLLLLIGDVTYANLYLTNGTGSDCYSCSFPLTPIHETYQPRWDYW 266
Query: 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGI 330
GRF+QNLVS VPIMVVEGNHEIE QA N+TFVAYSSRFAFPS+ESGS S+FYYSFNAGGI
Sbjct: 267 GRFVQNLVSNVPIMVVEGNHEIEKQAENRTFVAYSSRFAFPSQESGSSSTFYYSFNAGGI 326
Query: 331 HFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390
HFIMLGAYI+YDK+ QYKWLE+DL NVDRS+TPWLV TWHPPWYSSY +HYREAECMRV
Sbjct: 327 HFIMLGAYINYDKTAEQYKWLERDLENVDRSITPWLVVTWHPPWYSSYEAHYREAECMRV 386
Query: 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEP 450
EME LLY+YGVDI FNGHVHAYERSNRV+NY LDPCGPV+IT+GDGGN EKM+I ADEP
Sbjct: 387 EMEDLLYAYGVDITFNGHVHAYERSNRVYNYNLDPCGPVYITVGDGGNREKMAIKFADEP 446
Query: 451 GNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWA 510
G+CP+P STPDPYMGGFCATNFT G KFCWDRQPDYSAFRESSFG+GILEVKNETWA
Sbjct: 447 GHCPDPLSTPDPYMGGFCATNFTFGTKVSKFCWDRQPDYSAFRESSFGYGILEVKNETWA 506
Query: 511 LWTWHRNQDSNNKVGDQIYIVRQPDKCPFH 540
LW+W+RNQDS +VGDQIYIVRQPD CP H
Sbjct: 507 LWSWYRNQDSYKEVGDQIYIVRQPDICPIH 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554090|ref|XP_002518085.1| acid phosphatase, putative [Ricinus communis] gi|223542681|gb|EEF44218.1| acid phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/523 (77%), Positives = 465/523 (88%)
Query: 16 LFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE 75
L F LLS + A + +IP+TL+GPF+P TVP D S RG+A+D+PD+DP V+R V FE
Sbjct: 32 LSFYVLLSSATLAAAHGHIPTTLEGPFKPRTVPLDQSFRGHAIDLPDSDPRVQRTVRDFE 91
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
PEQ+SVSLS HDS+WI+WITG++QIGDNIKPL+P AS V YG S L H+ATG+SL
Sbjct: 92 PEQISVSLSSTHDSVWISWITGDYQIGDNIKPLNPSATASVVLYGRSIFPLTHQATGYSL 151
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
VY+QLYPFEGL+NYTSG+IHHVRLTGL+PN Y+YQCGDPSIPAMSD+Y+FRT+PASGP+
Sbjct: 152 VYNQLYPFEGLKNYTSGVIHHVRLTGLKPNTTYFYQCGDPSIPAMSDIYHFRTMPASGPK 211
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
S+P +IAIVGDLGLTYNTT T++H+ SN PDL+LLVGD TYANLYLTNGTG+DCY C+F
Sbjct: 212 SFPGKIAIVGDLGLTYNTTSTVDHLISNNPDLILLVGDATYANLYLTNGTGADCYKCAFP 271
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
+TPIHETYQPRWDYWGR+MQ L+S++PIMVVEGNHEIE QA NQTF AYSSRFAFPS+ES
Sbjct: 272 QTPIHETYQPRWDYWGRYMQPLISRIPIMVVEGNHEIEQQAQNQTFAAYSSRFAFPSKES 331
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 375
GS S+FYYSFNAGGIHF+MLGAYISY+KSG QYKWLE+DLANVDR VTPWLVATWHPPWY
Sbjct: 332 GSPSTFYYSFNAGGIHFVMLGAYISYNKSGDQYKWLERDLANVDREVTPWLVATWHPPWY 391
Query: 376 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435
++Y +HYREAECMRV ME LLY YGVD+VFNGHVHAYERSNRV+NYTLDPCGPVHIT+GD
Sbjct: 392 NTYKAHYREAECMRVAMEELLYKYGVDMVFNGHVHAYERSNRVYNYTLDPCGPVHITVGD 451
Query: 436 GGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 495
GGN EKM+ITHADEPGNCP+PS+TPD +MGGFCA NFTSGPAAGKFCWDRQPDYSA+RES
Sbjct: 452 GGNREKMAITHADEPGNCPDPSTTPDEFMGGFCAFNFTSGPAAGKFCWDRQPDYSAYRES 511
Query: 496 SFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 538
SFGHGILEVKNET ALWTWHRNQD + GDQIYIVRQ ++CP
Sbjct: 512 SFGHGILEVKNETHALWTWHRNQDLYSSAGDQIYIVRQQERCP 554
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356569147|ref|XP_003552767.1| PREDICTED: purple acid phosphatase 15-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/528 (78%), Positives = 463/528 (87%), Gaps = 3/528 (0%)
Query: 11 MGGIFLFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRR 70
MG + + +F LS + + + +P+TLDGPF+P TVP D S RGNAVD+ DTDPLV+R
Sbjct: 1 MGWVIVCMLFSLSCVIV---DGGVPTTLDGPFKPVTVPLDQSFRGNAVDLTDTDPLVQRT 57
Query: 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEA 130
V GF+PEQ+S+SLS +HDS+WI+WITGEFQIGDNI+PLDP+TVAS V+YG ++ H+A
Sbjct: 58 VEGFQPEQISLSLSASHDSVWISWITGEFQIGDNIEPLDPETVASIVQYGRFGRSMRHQA 117
Query: 131 TGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLP 190
TG+SLVY QLYPFEGLQNYTSGIIHHVRLTGL PN Y Y+CGDPS+ MSDV+YFRT+P
Sbjct: 118 TGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRPNTLYQYKCGDPSLSGMSDVHYFRTMP 177
Query: 191 ASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCY 250
ASGP+SYP RIA+VGDLGLTYNTT T+NHM+SN PDL+LLVGDV+ ANLYLTNGTG+DCY
Sbjct: 178 ASGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSCANLYLTNGTGADCY 237
Query: 251 SCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF 310
SCSF TPIHETYQPRWDYWGR+MQ L+S VPIMV+EGNHEIE QA NQTFVAYSSRFAF
Sbjct: 238 SCSFPNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIEEQAENQTFVAYSSRFAF 297
Query: 311 PSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATW 370
PSEESGS S+FYYSFNAGGIHFIMLGAYISYDKSG QYKWLE+DLA+VDR VTPWL+ATW
Sbjct: 298 PSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLERDLASVDREVTPWLIATW 357
Query: 371 HPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430
H PWYS+Y +HYREAECMRVEME LLY YGVDIVFNGHVHAYERSNRV+NYTLDPCGPV+
Sbjct: 358 HAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVY 417
Query: 431 ITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYS 490
IT+GDGGN EKM+ITHADEPG CPEPS+TPD YMGGFCA NFTSGPA G FCWDRQPDYS
Sbjct: 418 ITVGDGGNREKMAITHADEPGQCPEPSTTPDDYMGGFCAFNFTSGPAEGNFCWDRQPDYS 477
Query: 491 AFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 538
AFRESSFGHGILEVKNET ALW WHRNQD GD+IYIVR+P CP
Sbjct: 478 AFRESSFGHGILEVKNETHALWIWHRNQDFYGSAGDEIYIVREPQNCP 525
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141249|ref|XP_002323987.1| predicted protein [Populus trichocarpa] gi|222866989|gb|EEF04120.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/535 (77%), Positives = 462/535 (86%), Gaps = 1/535 (0%)
Query: 14 IFLFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTG 73
+ F + +S + IP+TLDGPF+P TVP D + RG+AVD+PDTDP V+R V G
Sbjct: 8 LISFCVLSISLIGTDNIVVGIPTTLDGPFKPVTVPLDKTFRGHAVDLPDTDPRVQRVVQG 67
Query: 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGH 133
FEPEQ+SVSLS HDS+WI+WITG+FQIGD IKPL+PKTVAS VRYG R L H+ATG+
Sbjct: 68 FEPEQISVSLSTTHDSVWISWITGDFQIGDRIKPLNPKTVASVVRYGRLRIPLIHKATGY 127
Query: 134 SLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASG 193
SLVY+QLYPF GLQNYTSGIIHHVRLTGL+PN Y+YQCGDPSIPAMS YYF+T+PASG
Sbjct: 128 SLVYNQLYPFVGLQNYTSGIIHHVRLTGLKPNTLYHYQCGDPSIPAMSSKYYFKTMPASG 187
Query: 194 PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 253
P+SYP RIAIVGDLGLTYNTT T++H+ N PDL+LLVGDV YANLYLTNGTG+DCYSCS
Sbjct: 188 PKSYPSRIAIVGDLGLTYNTTSTVDHVIGNNPDLILLVGDVCYANLYLTNGTGADCYSCS 247
Query: 254 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE 313
FS+TPIHETYQPRWDYWGR+MQ + SK+PIMVVEGNHEIE Q NQTFVAYSSRFAFPS+
Sbjct: 248 FSQTPIHETYQPRWDYWGRYMQPVTSKIPIMVVEGNHEIEKQVENQTFVAYSSRFAFPSK 307
Query: 314 ESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPP 373
ESGS S+FYYSFNAGGIHFIMLG YI+Y+KS HQYKWL+KDLA VDR VTPWLVATWHPP
Sbjct: 308 ESGSSSTFYYSFNAGGIHFIMLGGYIAYNKSAHQYKWLKKDLAKVDRKVTPWLVATWHPP 367
Query: 374 WYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITI 433
WYS+Y +HYREAECMR ME LLY YGVDI+FNGH+HAYERSNRV+NYTLDPCGPVHIT+
Sbjct: 368 WYSTYKAHYREAECMRTAMEDLLYQYGVDIIFNGHIHAYERSNRVYNYTLDPCGPVHITV 427
Query: 434 GDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFR 493
GDGGN EKM+I HADEP NCP+PS+TPD YMGGFCA NFTSGPAAGKFCWDRQPDYSA+R
Sbjct: 428 GDGGNREKMAIAHADEPRNCPDPSTTPDEYMGGFCAFNFTSGPAAGKFCWDRQPDYSAYR 487
Query: 494 ESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPFH-GMPQPKP 547
ESSFGHGI EVKNET ALWTWHRNQD N GDQIYIVRQP++CP MP +P
Sbjct: 488 ESSFGHGIFEVKNETHALWTWHRNQDMYNSPGDQIYIVRQPERCPTEPKMPTREP 542
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225469592|ref|XP_002272478.1| PREDICTED: purple acid phosphatase 15 [Vitis vinifera] gi|296088799|emb|CBI38249.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/523 (77%), Positives = 461/523 (88%)
Query: 16 LFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE 75
L + ++ ++ A +A IP+TLDGPF P TVP+D SLRG AVD+PDTDP VRRRV GFE
Sbjct: 5 LCCVIVVILVNFAAIHARIPTTLDGPFTPVTVPFDQSLRGKAVDLPDTDPRVRRRVKGFE 64
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
PEQ+SV+LS + DS+WI+WITGEFQIG NIKPL+PKTV+S VRYGT R L + G+SL
Sbjct: 65 PEQISVALSASFDSVWISWITGEFQIGYNIKPLNPKTVSSVVRYGTLRYPLRRKVMGYSL 124
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
VY+QLYPFEGLQNYTSGIIHHVRL GL+P+ +YYY+CGDP+I AMS++Y FRT+P SGP+
Sbjct: 125 VYNQLYPFEGLQNYTSGIIHHVRLAGLKPSTRYYYRCGDPTIGAMSNIYSFRTMPVSGPR 184
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
SYP++I I+GDLGLTYN+T TI+H+ SN+PDLVLLVGDVTYAN YLTNGTGSDCYSCSF
Sbjct: 185 SYPRKIGIIGDLGLTYNSTATIDHLISNKPDLVLLVGDVTYANQYLTNGTGSDCYSCSFP 244
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
+TPIHETYQPRWDYWGRFMQNLVSKVP+MV+EGNHEIE QA + FVAYSSRFAFPS+ES
Sbjct: 245 QTPIHETYQPRWDYWGRFMQNLVSKVPMMVIEGNHEIEEQAEKKNFVAYSSRFAFPSKES 304
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 375
GS S+FYYSFNAGGIHFIMLGAY +Y+KS QYKWLE+DLA VDRS+TPWL+A WHPPWY
Sbjct: 305 GSASTFYYSFNAGGIHFIMLGAYAAYNKSADQYKWLERDLAKVDRSITPWLIAAWHPPWY 364
Query: 376 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435
SSY +HYRE ECMR EME LLYSYGVDIVFNGHVHAYERSNRV+NYTLDPCGPVHI +GD
Sbjct: 365 SSYKAHYREVECMRQEMEELLYSYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVHIMVGD 424
Query: 436 GGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 495
GGN EKM+I HAD PG CPEPS+TPD ++GGFCATNFT GPAAGKFCWDRQPD+SAFRES
Sbjct: 425 GGNREKMAIEHADAPGKCPEPSTTPDTFIGGFCATNFTFGPAAGKFCWDRQPDFSAFRES 484
Query: 496 SFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 538
SFGHGILEVKN+TWALWTW+RNQDS + GDQIYIVR PD CP
Sbjct: 485 SFGHGILEVKNDTWALWTWYRNQDSRDNAGDQIYIVRTPDMCP 527
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147798298|emb|CAN65638.1| hypothetical protein VITISV_037278 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/523 (77%), Positives = 461/523 (88%)
Query: 16 LFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE 75
L + ++ ++ A +A IP+TLDGPF P TVP+D SLRG AVD+PDTDP VRRRV GFE
Sbjct: 5 LCCVIVVILVNFAAIHARIPTTLDGPFXPVTVPFDQSLRGKAVDLPDTDPRVRRRVKGFE 64
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
PEQ+SV+LS + DS+WI+WITGEFQIG NIKPL+PKTV+S VRYGT R L + G+SL
Sbjct: 65 PEQISVALSASFDSVWISWITGEFQIGYNIKPLNPKTVSSVVRYGTLRYPLRRKVMGYSL 124
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
VY+QLYPFEGLQNYTSGIIHHVRL GL+P+ +YYY+CGDP+I AMS++Y FRT+P SGP+
Sbjct: 125 VYNQLYPFEGLQNYTSGIIHHVRLAGLKPSTRYYYRCGDPTIGAMSNIYSFRTMPVSGPR 184
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
SYP++I I+GDLGLTYN+T TI+H+ SN+PDLVLLVGDVTYAN YLTNGTGSDCYSCSF
Sbjct: 185 SYPRKIGIIGDLGLTYNSTATIDHLISNKPDLVLLVGDVTYANQYLTNGTGSDCYSCSFP 244
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
+TPIHETYQPRWDYWGRFMQNLVSKVP+MV+EGNHEIE QA + FVAYSSRFAFPS+ES
Sbjct: 245 QTPIHETYQPRWDYWGRFMQNLVSKVPMMVIEGNHEIEEQAEKKNFVAYSSRFAFPSKES 304
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 375
GS S+FYYSFNAGGIHFIMLGAY +Y+KS QYKWLE+DLA VDRS+TPWL+A WHPPWY
Sbjct: 305 GSASTFYYSFNAGGIHFIMLGAYAAYNKSADQYKWLERDLAKVDRSITPWLIAAWHPPWY 364
Query: 376 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435
SSY +HYRE ECMR EME LLYSYGVDIVFNGHVHAYERSNRV+NYTLDPCGPVHI +GD
Sbjct: 365 SSYKAHYREVECMRQEMEELLYSYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVHIMVGD 424
Query: 436 GGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 495
GGN EKM+I HAD PG CPEPS+TPD ++GGFCATNFT GPAAGKFCWDRQPD+SAFRES
Sbjct: 425 GGNREKMAIEHADAPGKCPEPSTTPDTFIGGFCATNFTFGPAAGKFCWDRQPDFSAFRES 484
Query: 496 SFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCP 538
SFGHGILEVKN+TWALWTW+RNQDS + GDQIYIVR PD CP
Sbjct: 485 SFGHGILEVKNDTWALWTWYRNQDSRDNAGDQIYIVRTPDMCP 527
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|189311132|gb|ACD87745.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/510 (79%), Positives = 459/510 (90%)
Query: 31 NANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSI 90
+ +IPSTL+GPF+P TVP+D +LRG AVD+ +TDP VRRRV GFEPEQ+SVSLS +HDS+
Sbjct: 27 HCHIPSTLEGPFDPVTVPFDPALRGVAVDLSETDPRVRRRVRGFEPEQISVSLSTSHDSV 86
Query: 91 WITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150
WI+W+TGEFQIG +IKPLDPKTV+S V+YGTSR L HEA G SL+Y+QLYPFEGLQNYT
Sbjct: 87 WISWVTGEFQIGLDIKPLDPKTVSSVVQYGTSRFELVHEARGQSLIYNQLYPFEGLQNYT 146
Query: 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLT 210
SGIIHHV+L GLEP+ YYYQCGDPS+ AMSD+YYFRT+P SG +SYP ++A+VGDLGLT
Sbjct: 147 SGIIHHVQLKGLEPSTLYYYQCGDPSLQAMSDIYYFRTMPISGSKSYPGKVAVVGDLGLT 206
Query: 211 YNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270
YNTT TI H++SNEPDL+LL+GDVTYANLYLTNGTGSDCYSCSF TPIHETYQPRWDYW
Sbjct: 207 YNTTTTIGHLTSNEPDLLLLIGDVTYANLYLTNGTGSDCYSCSFPLTPIHETYQPRWDYW 266
Query: 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGI 330
GRFMQNLVS VPIMVVEGNHEIE QA N+TFVAYSSRFAFPS+ESGS S+FYYSFNAGGI
Sbjct: 267 GRFMQNLVSNVPIMVVEGNHEIEKQAENRTFVAYSSRFAFPSQESGSSSTFYYSFNAGGI 326
Query: 331 HFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390
HFIMLGAYI+YDK+ + KWLE+DL NVDRS+TPWLV TWHPPWYSSY +HYREAECMRV
Sbjct: 327 HFIMLGAYINYDKTAEEDKWLERDLENVDRSITPWLVVTWHPPWYSSYEAHYREAECMRV 386
Query: 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEP 450
EME LLY+YGVDI+FNGHVHAYERSNRV+NY LDPCGPV+IT+GDGGN EKM+I ADEP
Sbjct: 387 EMEDLLYAYGVDIIFNGHVHAYERSNRVYNYNLDPCGPVYITVGDGGNREKMAIKFADEP 446
Query: 451 GNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWA 510
G+CP+P STPDPYMGGFCATNFT G KFCWDRQPDYSAFRESSFG+GILEVKNETWA
Sbjct: 447 GHCPDPLSTPDPYMGGFCATNFTFGTKVSKFCWDRQPDYSAFRESSFGYGILEVKNETWA 506
Query: 511 LWTWHRNQDSNNKVGDQIYIVRQPDKCPFH 540
LW+W+RNQDS +VGDQIYIVRQPD CP H
Sbjct: 507 LWSWYRNQDSYKEVGDQIYIVRQPDICPIH 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560127|ref|XP_002521081.1| acid phosphatase, putative [Ricinus communis] gi|223539650|gb|EEF41232.1| acid phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/532 (79%), Positives = 467/532 (87%), Gaps = 5/532 (0%)
Query: 17 FFIFLLSPLDIRA-----TNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRV 71
F+ LL + A N +IPSTLDGPF+P TVP+D SLRGNAVD+P+TDP V RRV
Sbjct: 15 LFLLLLVTTSVAAGLFVHVNKHIPSTLDGPFDPVTVPFDVSLRGNAVDLPETDPRVGRRV 74
Query: 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEAT 131
GFEPEQ+SVSLS + DS+WI+WITG+FQIG +I PLDP VAS VRYGT R L+ EA+
Sbjct: 75 RGFEPEQISVSLSSSFDSVWISWITGDFQIGYSITPLDPARVASIVRYGTLRYPLSREAS 134
Query: 132 GHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPA 191
G+SLVY QLYPF+GLQNYTSGIIHHVRLTGL+P+ YYY+CGDPSI AMS + F+T+P
Sbjct: 135 GYSLVYSQLYPFDGLQNYTSGIIHHVRLTGLKPDRVYYYRCGDPSIKAMSGIRSFKTMPY 194
Query: 192 SGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS 251
SGP +YP RIA++GDLGLTYNTT TI+H++ N+PDLVLLVGDVTYANLYLTNGTGSDCYS
Sbjct: 195 SGPSNYPSRIAVLGDLGLTYNTTATISHVTKNKPDLVLLVGDVTYANLYLTNGTGSDCYS 254
Query: 252 CSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFP 311
CSFS TPIHETYQPRWDYWGRFMQNLVS+VPIMVVEGNHEIE QA NQTFVAYSSRFAFP
Sbjct: 255 CSFSGTPIHETYQPRWDYWGRFMQNLVSRVPIMVVEGNHEIEQQARNQTFVAYSSRFAFP 314
Query: 312 SEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWH 371
S+ESGSLS+ YYSFNAGGIHFIMLGAYI Y+KS Q+KWLE DLANVDRS+TPWLVA WH
Sbjct: 315 SKESGSLSTMYYSFNAGGIHFIMLGAYIDYNKSADQFKWLEIDLANVDRSLTPWLVAVWH 374
Query: 372 PPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431
PPWYSSY +HYREAECMRV ME LLYSY VDIVFNGHVHAYERSNRV+NY LDPCGPV+I
Sbjct: 375 PPWYSSYKAHYREAECMRVAMEDLLYSYSVDIVFNGHVHAYERSNRVYNYKLDPCGPVYI 434
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
T+GDGGN EKM++ HADEPGNCPEP +TPDPYMGGFCATNFT+GPAAGKFCWDRQPDYSA
Sbjct: 435 TVGDGGNREKMAVEHADEPGNCPEPLTTPDPYMGGFCATNFTTGPAAGKFCWDRQPDYSA 494
Query: 492 FRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPFHGMP 543
FRESSFGHGILEVKNETWALWTWHRNQDS +KVGDQIYIVRQPD C + P
Sbjct: 495 FRESSFGHGILEVKNETWALWTWHRNQDSTSKVGDQIYIVRQPDICRVNPTP 546
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118486309|gb|ABK94996.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/508 (79%), Positives = 455/508 (89%), Gaps = 3/508 (0%)
Query: 34 IPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSIWIT 93
IPSTLDGPFEP TVP+D SLRGNAVD+PD DP VRRRV GF+PEQ+S+SLS +DS+WI+
Sbjct: 35 IPSTLDGPFEPRTVPFDVSLRGNAVDLPDADPRVRRRVKGFQPEQISLSLSATYDSVWIS 94
Query: 94 WITGEFQIGD---NIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150
WITGEFQ+ + NI PLDPK+VAS VRYGT R LNHEA G+SLVY QLYPFEGLQNYT
Sbjct: 95 WITGEFQMSNHNKNITPLDPKSVASVVRYGTLRNPLNHEAKGYSLVYSQLYPFEGLQNYT 154
Query: 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLT 210
SGIIHHVRLTGL+P+ YYY+CGDPSI A+SDVY F+T+P S P++YPKRIA++GDLGLT
Sbjct: 155 SGIIHHVRLTGLKPDKLYYYRCGDPSIGALSDVYSFKTMPVSSPKTYPKRIAVMGDLGLT 214
Query: 211 YNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270
YNT+ TI+H+ SN+P L LLVGDVTYANLYLTNGTG DCYSCSF +PIHETYQPRWDYW
Sbjct: 215 YNTSTTISHVISNKPQLALLVGDVTYANLYLTNGTGCDCYSCSFPNSPIHETYQPRWDYW 274
Query: 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGI 330
GRFMQ LVSKVP+MVVEGNHEIE Q GNQTF AYSSRFAFP++ESGS S+FYYSFNAGGI
Sbjct: 275 GRFMQPLVSKVPLMVVEGNHEIEKQVGNQTFAAYSSRFAFPAKESGSSSTFYYSFNAGGI 334
Query: 331 HFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390
HF+MLGAYI+Y +S QY+WLE+DLANVDR VTPWLVA WHPPWYSSY++HYREAECM
Sbjct: 335 HFVMLGAYIAYHRSSDQYRWLERDLANVDRFVTPWLVAVWHPPWYSSYNAHYREAECMMA 394
Query: 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEP 450
ME LLYSY VDIVFNGHVHAYERSNRV+NYTLDPCGPVHI +GDGGN EKM++ HADEP
Sbjct: 395 AMEELLYSYAVDIVFNGHVHAYERSNRVYNYTLDPCGPVHIVVGDGGNREKMAVGHADEP 454
Query: 451 GNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWA 510
GNCP+P++TPD ++GGFCA NFT+GPAAG+FCWDRQPDYSAFRESSFGHGILEVKN+TWA
Sbjct: 455 GNCPDPATTPDQHIGGFCALNFTTGPAAGQFCWDRQPDYSAFRESSFGHGILEVKNQTWA 514
Query: 511 LWTWHRNQDSNNKVGDQIYIVRQPDKCP 538
LWTWHRNQDS + VGDQIYIVRQPDKCP
Sbjct: 515 LWTWHRNQDSRSTVGDQIYIVRQPDKCP 542
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 552 | ||||||
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.914 | 0.949 | 0.746 | 7.9e-220 | |
| TAIR|locus:2046407 | 545 | PAP13 "purple acid phosphatase | 0.903 | 0.915 | 0.554 | 7.9e-149 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.353 | 0.449 | 0.477 | 1.5e-77 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.335 | 0.423 | 0.505 | 1.4e-73 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.336 | 0.435 | 0.478 | 2e-72 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.333 | 0.421 | 0.467 | 3.3e-72 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.445 | 0.525 | 0.367 | 2.3e-52 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.451 | 0.534 | 0.363 | 7.7e-52 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.422 | 0.528 | 0.352 | 2e-50 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.451 | 0.534 | 0.339 | 9.8e-48 |
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2123 (752.4 bits), Expect = 7.9e-220, P = 7.9e-220
Identities = 379/508 (74%), Positives = 433/508 (85%)
Query: 33 NIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSIWI 92
+IPSTLDGPF P TVP D SLRG A+D+PDTDP VRRRV GFEPEQ+S+SLS +HDSIW+
Sbjct: 21 SIPSTLDGPFVPVTVPLDTSLRGQAIDLPDTDPRVRRRVIGFEPEQISLSLSSDHDSIWV 80
Query: 93 TWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152
+WITGEFQIG +KPLDP ++ S V++GT R +L+HEA GHSLVY QLYPF+GL NYTSG
Sbjct: 81 SWITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGLLNYTSG 140
Query: 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYN 212
IIHHVR+TGL+P+ YYY+CGDPS AMS +++FRT+P S P SYP RIA+VGDLGLTYN
Sbjct: 141 IIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTYN 200
Query: 213 TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272
TT TI+H+ N PDL+LL+GDV+YANLYLTNGT SDCYSCSF +TPIHETYQPRWDYWGR
Sbjct: 201 TTDTISHLIHNSPDLILLIGDVSYANLYLTNGTSSDCYSCSFPETPIHETYQPRWDYWGR 260
Query: 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHF 332
FM+NL SKVP+MV+EGNHEIE QA N+TF AYSSRFAFP ESGS S+ YYSFNAGGIHF
Sbjct: 261 FMENLTSKVPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSFNAGGIHF 320
Query: 333 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXXXXXXREAECMRVEM 392
+MLGAYI+YDKS QY+WL+KDLA VDRSVTPWLVA+ REAECM+ M
Sbjct: 321 VMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAECMKEAM 380
Query: 393 EALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGN 452
E LLYSYG DIVFNGHVHAYERSNRV+NY LDPCGPV+I IGDGGN EKM+I HAD+PG
Sbjct: 381 EELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDPGK 440
Query: 453 CPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALW 512
CPEP +TPDP MGGFCA NFT P+ KFCWDRQPDYSA RESSFGHGILE+KNETWALW
Sbjct: 441 CPEPLTTPDPVMGGFCAWNFT--PS-DKFCWDRQPDYSALRESSFGHGILEMKNETWALW 497
Query: 513 TWHRNQDSNNKVGDQIYIVRQPDKCPFH 540
TW+RNQDS+++VGDQIYIVRQPD+CP H
Sbjct: 498 TWYRNQDSSSEVGDQIYIVRQPDRCPLH 525
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| TAIR|locus:2046407 PAP13 "purple acid phosphatase 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 288/519 (55%), Positives = 346/519 (66%)
Query: 35 PSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE-PEQLSVSLSFNHDSIWIT 93
PSTLDGP P T P D +L A D+P++DP + ++ F PEQ+SVSLS++ DS+WI+
Sbjct: 27 PSTLDGPLNPVTAPLDPNLNPIAFDLPESDPSFVKPISEFLLPEQISVSLSYSFDSVWIS 86
Query: 94 WITGEFQIGD-NIKPLDPKTVASFVRYGTS--RTNLNHEATGHSLVYDQLYPFE-GLQNY 149
W+TGE+QIG+ + PLDP V S V+Y R ATGHS+VY+Q Y E G NY
Sbjct: 87 WVTGEYQIGEKDSAPLDPNCVQSIVQYREFDVRRTRKQNATGHSIVYNQQYSSENGFMNY 146
Query: 150 TSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGL 209
TSGIIHHV+LTGL+PN Y YQCGDPS+ AMS YYFRT+P S ++YP RI + GDLGL
Sbjct: 147 TSGIIHHVQLTGLKPNTLYRYQCGDPSLSAMSKEYYFRTMPKSTSENYPHRIVVAGDLGL 206
Query: 210 TYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH--------- 260
TYNT+ + H+ SN PDLV+L+G +YA+ YL N T DC SC +
Sbjct: 207 TYNTSTVLGHILSNHPDLVVLLGGFSYADTYLANKTKLDCSSCHCDQNGTSSDCGSCYSS 266
Query: 261 -ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TFVAYSSRFAFPSEESGSL 318
ETYQPRWDYWGRFM+ L + VP M+V G HEIE Q N TF AYSSRFAFPS ESGS
Sbjct: 267 GETYQPRWDYWGRFMEPLTANVPTMMVAGEHEIEPQTENNLTFAAYSSRFAFPSNESGSF 326
Query: 319 SSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXX 378
S YYSFNAGG HFI+L +Y YD S QY WLE DL ++RS TPW+VAT
Sbjct: 327 SPLYYSFNAGGAHFIVLNSYTLYDNSSDQYIWLESDLIKINRSETPWVVATWSLPWYSTF 386
Query: 379 XXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438
REAE MR+ +E LLY+Y VDIVFN HV AYERSNRV+NYTLD CGPV+IT G GG
Sbjct: 387 KGHYREAESMRIHLEDLLYNYRVDIVFNSHVDAYERSNRVYNYTLDQCGPVYITTGAGG- 445
Query: 439 LEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFG 498
K+ H D+PGN P+PS G N T P + C +QP+YSA+RESSFG
Sbjct: 446 AGKLETQHVDDPGNIPDPSQNYSCRSSGL---NSTLEPVKDETCPVKQPEYSAYRESSFG 502
Query: 499 HGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKC 537
GILEVKNET ALW+W+RNQD D I+IVRQP+ C
Sbjct: 503 FGILEVKNETHALWSWNRNQDLYYLAADVIHIVRQPEMC 541
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| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 493 (178.6 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 94/197 (47%), Positives = 124/197 (62%)
Query: 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGNQTFVAYSSRFAFPSEESGSL 318
+T+QP WD +GR ++ L SK P MV EGNHEIE + TF +Y++R+ P ES S
Sbjct: 180 DTHQPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESFST 239
Query: 319 SSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXX 378
S+ YYSF+ G+H +MLG+Y +D QY+WL+ DLA VDR TPW+V
Sbjct: 240 SNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTN 299
Query: 379 XXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438
E E MR ME+LL++ VD+VF+GHVHAYER RV+N DPCGP+HITIGDGGN
Sbjct: 300 EAHEGEGESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGN 359
Query: 439 LEKMSITHADEPGNCPE 455
E ++++ P E
Sbjct: 360 REGLALSFKKPPSPLSE 376
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| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 471 (170.9 bits), Expect = 1.4e-73, Sum P(3) = 1.4e-73
Identities = 94/186 (50%), Positives = 116/186 (62%)
Query: 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFY 322
Q +WD +G +Q L S P MV +GNHE E+ FV+++SR+ P EESGS S+ Y
Sbjct: 183 QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLY 242
Query: 323 YSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXXXXXX 382
YSF G+H IMLG+Y YD+ QY WL+ DL+ VDR TPWL+
Sbjct: 243 YSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQ 302
Query: 383 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKM 442
E + M EME LLY+ GVDIVF GHVHAYER+ RV N DPCGPVHITIGDGGN E +
Sbjct: 303 HEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGL 362
Query: 443 SITHAD 448
+ + D
Sbjct: 363 ARKYKD 368
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| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 462 (167.7 bits), Expect = 2.0e-72, Sum P(3) = 2.0e-72
Identities = 91/190 (47%), Positives = 115/190 (60%)
Query: 263 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFAFPSEESGSLSS 320
YQP WD +GR +Q L S+ P MV GNHE+E + F AY+ R+ P EESGS S+
Sbjct: 181 YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSN 240
Query: 321 FYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXXXX 380
YYSFN G+H IMLG+Y ++ QY+WLE +L +DR TPW+VA
Sbjct: 241 LYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEA 300
Query: 381 XXREAEC--MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438
E E M+ ME LLY VD+VF GHVHAYER +RV+ D CGPV+I IGDGGN
Sbjct: 301 HQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGN 360
Query: 439 LEKMSITHAD 448
LE ++ + D
Sbjct: 361 LEGLATKYRD 370
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| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 457 (165.9 bits), Expect = 3.3e-72, Sum P(3) = 3.3e-72
Identities = 87/186 (46%), Positives = 115/186 (61%)
Query: 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ--TFVAYSSRFAFPSEESGSL 318
+T+QP WD +GR ++ L S P MV EGNHEIE+ N +F +Y++R+ P ES S
Sbjct: 184 DTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSH 243
Query: 319 SSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXX 378
S+ YYSF+ G+H +MLG+Y Y+ QY WL+ DL VDR TPWLV
Sbjct: 244 SNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTN 303
Query: 379 XXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438
E E MR +E+LLY VD+VF GHVH YER ++N DPCGP++ITIGDGGN
Sbjct: 304 KAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGN 363
Query: 439 LEKMSI 444
E +++
Sbjct: 364 REGLAL 369
|
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| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 104/283 (36%), Positives = 145/283 (51%)
Query: 184 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYL 241
++F T P GP P ++GDLG +Y++ T+ H +N + VL VGD++YA+ Y
Sbjct: 146 FWFFTPPEIGPD-VPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTY- 203
Query: 242 TNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAG-N 298
P H+ RWD WGRF + + P + GNHE++ + G N
Sbjct: 204 ----------------PDHDNR--RWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGEN 245
Query: 299 QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 358
+ F ++ R+ P SGS F+YS G + I+L +Y +Y K QY+WLE++ V
Sbjct: 246 RPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKV 305
Query: 359 DRSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 418
+R+ TPWL+ E E MRV EA Y VD+VF GHVHAYERS RV
Sbjct: 306 NRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERV 365
Query: 419 FN--YTL---------DPCGPVHITIGDGGNLEKMSITHADEP 450
N Y + D PV+ITIGDGGN+E ++ T EP
Sbjct: 366 SNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLA-TKMTEP 407
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| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 405 (147.6 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 105/289 (36%), Positives = 144/289 (49%)
Query: 184 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN-EPDLVLLVGDVTYANLYLT 242
+ F T P GP P I+GDLG TY + T+ H SN + VL GD++YA+ +
Sbjct: 143 FSFTTPPKIGPD-VPYTFGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDH-- 199
Query: 243 NGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGN-Q 299
P H+ Q +WD WGRFM+ + P + GNHEI+ G
Sbjct: 200 ---------------PNHD--QRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPH 242
Query: 300 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 359
F Y+ R+ + S S S +YS H I+L +Y +Y K QY WLE++L NV+
Sbjct: 243 AFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVN 302
Query: 360 RSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 419
R TPWL+ E E MRV E+ L + VD+V +GHVHAYERS R+
Sbjct: 303 REETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERIS 362
Query: 420 N--YTL---------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPS 457
N Y + DP P++ITIGDGGN+E ++ + D P+PS
Sbjct: 363 NIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVD-----PQPS 406
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| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 346 (126.9 bits), Expect = 2.0e-50, Sum P(3) = 2.0e-50
Identities = 96/272 (35%), Positives = 137/272 (50%)
Query: 201 IAIVGDLGLTYNTTCTI-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259
I DLG TY + T+ N+MS+ + VL VGD++YA+ + P
Sbjct: 140 IRYYSDLGQTYASNQTLYNYMSNPKGQAVLFVGDLSYADDH-----------------PN 182
Query: 260 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE-AQAGNQT--FVAYSSRFAFPSEESG 316
H+ Q +WD +GRF++ + P GN+EI+ AQ+ ++T F Y +R+ P + S
Sbjct: 183 HD--QRKWDSYGRFVEPSAAYQPWSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQ 240
Query: 317 SLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXX 376
S S +YS + I+L +Y +YDK Q WL+ +L V+RS T WL+
Sbjct: 241 STSPLWYSIKRASTYIIVLSSYSAYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYN 300
Query: 377 XXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN--YTL---------DP 425
E E MRV E VDIVF GHVHAYERS R+ N Y + D
Sbjct: 301 SNNYHYMEGESMRVTFEPWFVENKVDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQ 360
Query: 426 CGPVHITIGDGGNLEKMSITHADEPGNCPEPS 457
P++ITIGDGGN+E ++ + D P+PS
Sbjct: 361 NAPIYITIGDGGNIEGIANSFTD-----PQPS 387
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| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 366 (133.9 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 98/289 (33%), Positives = 139/289 (48%)
Query: 184 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN-EPDLVLLVGDVTYANLYLT 242
+ F + P GP P I+GDLG T + T+ H SN + VL GD++YA+ +
Sbjct: 143 FSFTSPPKVGPD-VPYTFGIIGDLGQTLASNETLYHYMSNPKGQAVLFPGDLSYADDH-- 199
Query: 243 NGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGN-Q 299
P H+ Q +WD WGRF++ + + GNHEI+ G
Sbjct: 200 ---------------PNHD--QRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPH 242
Query: 300 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 359
F Y R+ + S S+S +YS H I+L +Y +Y K QY WLE++L V+
Sbjct: 243 AFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVN 302
Query: 360 RSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 419
R TPWL+ E E MR E+ + VD+V +GHVH+YERS RV
Sbjct: 303 REETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVS 362
Query: 420 N--YTL---------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPS 457
N Y + DP P++ITIGDGGN+E ++ + D P+PS
Sbjct: 363 NIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTD-----PQPS 406
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SFU3 | PPA15_ARATH | 3, ., 1, ., 3, ., 2 | 0.7657 | 0.9148 | 0.9492 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_LG_XVII000182 | hypothetical protein (542 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 552 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-97 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 4e-97 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-19 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 8e-12 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 1e-09 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 1e-08 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 5e-07 | |
| COG3540 | 522 | COG3540, PhoD, Phosphodiesterase/alkaline phosphat | 4e-05 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 6e-04 | |
| pfam09423 | 452 | pfam09423, PhoD, PhoD-like phosphatase | 6e-04 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 298 bits (764), Expect = 1e-97
Identities = 125/352 (35%), Positives = 164/352 (46%), Gaps = 76/352 (21%)
Query: 197 YPKRIAIVGDLGL-TYNTTCTINHM--SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 253
P + A+ GD+G T N+T T++H+ D +L VGD+ YA+ Y
Sbjct: 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN----------- 51
Query: 254 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE 313
RWD + R ++ L S VP MV GNHE + A+ RF FP
Sbjct: 52 ----------GSRWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHS 101
Query: 314 ESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH---QYKWLEKDLANVDRSVTPWLVATW 370
SGS S+ +YSF+ G +HF+ L + + G QY WLE DLA VDRS TPW++
Sbjct: 102 PSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMG 161
Query: 371 HPPWYSSYSSHY--REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL----- 423
H P Y S + H E E MR +E L Y YGVD+V +GHVHAYER+ V+N T+
Sbjct: 162 HRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221
Query: 424 ---DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGK 480
+P GPVHI IG GGN E + A
Sbjct: 222 PYSNPKGPVHIVIGAGGNDEGLDPFSAPP------------------------------- 250
Query: 481 FCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVR 532
P +SAFRES +G G L V N T + W RN D V D +I++
Sbjct: 251 ------PAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDD--GVVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 301 bits (772), Expect = 4e-97
Identities = 175/459 (38%), Positives = 233/459 (50%), Gaps = 90/459 (19%)
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
P+Q+ +SL D + I+WIT D+I P V YGT A G S
Sbjct: 44 PDQVHISL-VGPDKMRISWITQ-----DSIPPS--------VVYGTVSGKYEGSANGTSS 89
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
Y L Y SG I+ V + L+PN YYY+CG PS + + FRT P+
Sbjct: 90 SYHYLLI------YRSGQINDVVIGPLKPNTVYYYKCGGPS---STQEFSFRTPPSK--- 137
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
+P + A+ GDLG + T T+ H+S + D+ +L GD++YAN Y
Sbjct: 138 -FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFY--------------- 181
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEA--QAGNQTFVAYSSRFAFPSE 313
QP WD +GR +Q L S+ P MV GNHE+E + F AY++R+ P E
Sbjct: 182 --------QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFE 233
Query: 314 ESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPP 373
ESGS S+ YYSFN G+H IMLG+Y ++ QY+WLE +L +DR TPW+VA H P
Sbjct: 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAP 293
Query: 374 WYSSYSSHYREAEC--MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431
WY+S +H E E M+ ME LLY VD+VF GHVHAYER +RV+ D CGPV+I
Sbjct: 294 WYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYI 353
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
TIGDGGN E ++ + D +PD S
Sbjct: 354 TIGDGGNREGLATKYIDP------------------------------------KPDISL 377
Query: 492 FRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 530
FRE+SFGHG L V + WTWHRN D + D +++
Sbjct: 378 FREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWL 416
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 86.0 bits (212), Expect = 2e-19
Identities = 39/217 (17%), Positives = 66/217 (30%), Gaps = 36/217 (16%)
Query: 200 RIAIVGDLGLTYNTTCTINHM----SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
RI ++GDL + + + +PDLVL +GD+
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP--------------- 45
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
F L + P+ +V GNH+ ++ F + +
Sbjct: 46 ---------SLEVLALLFALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVL--- 93
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 375
+ G + I L + ++LE + ++ + H P
Sbjct: 94 -----GNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLS 148
Query: 376 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412
S S +E LL GVD+V GH H
Sbjct: 149 PSLDSGDDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 60.2 bits (147), Expect = 8e-12
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 43/102 (42%)
Query: 427 GPVHITIGDGGN-LEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDR 485
PVHI +G GN L+ D
Sbjct: 2 APVHIVVGAAGNGLDPF----------------------------------------PDP 21
Query: 486 QPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQ 527
QP +SAFR+S +G+G L V N T W + R+ D V D
Sbjct: 22 QPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDD--GTVLDS 61
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 63/275 (22%), Positives = 90/275 (32%), Gaps = 81/275 (29%)
Query: 200 RIAIVGDLG--LTYNTTCTINHMSS----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 253
R +GD G T M+ PD +L +GD N Y G
Sbjct: 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGD----NFY---DDG------- 47
Query: 254 FSKTPIHETYQPRWD------YWGRFMQNLVSKVPIMVVEGNHE----IEAQAGNQTFVA 303
+ PR++ Y +Q VP +V GNH+ + AQ + T
Sbjct: 48 -----VGSVDDPRFETTFEDVYSAPSLQ-----VPWYLVLGNHDYSGNVSAQI-DYTKRP 96
Query: 304 YSSRFAFPSEESGSLSSFYYSFNAGG------IHFIML-------------GAYISYDKS 344
S R+ P+ +YY + + FIM+ Y +
Sbjct: 97 NSPRWTMPA--------YYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGK 148
Query: 345 GH--QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVD 402
Q WLEK LA S W + H P YSS + C+ + LL Y VD
Sbjct: 149 LAEEQLAWLEKTLAA---STADWKIVVGHHPIYSS--GEHGPTSCLVDRLLPLLKKYKVD 203
Query: 403 IVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437
+GH H + + D G + G G
Sbjct: 204 AYLSGHDHNLQ------HIKDDGSGTSFVVSGAGS 232
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 42/160 (26%)
Query: 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSL--SSF---YYSFN 326
+ L +P++ V GNH++ GN P+EES F Y+SF
Sbjct: 78 DVLSLLDPDIPLVCVCGNHDV----GNT-----------PTEESIKDYRDVFGDDYFSFW 122
Query: 327 AGGIHFIMLGAYISYDKSG------HQYKWLEKDLANVDRSVTPWLVATWHPPW------ 374
GG+ FI+L + + +D S Q WLE+ L S ++ H PW
Sbjct: 123 VGGVFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPD 182
Query: 375 ----YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
Y + R+ + GV VF+GH H
Sbjct: 183 EEDSYFNIPKSVRK------PLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 5e-07
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 13/100 (13%)
Query: 342 DKSGHQYKWLEKDLANVDRSVTPWL-------VATWHPPWYSSYSSHYREAECMRVEMEA 394
+ L LA + P + H P Y + + +
Sbjct: 38 GDGPDPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLE 97
Query: 395 LLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434
LL YGVD+V +GH H YER D G ++I G
Sbjct: 98 LLEKYGVDLVLSGHTHVYER------REPDGGGTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|226070 COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 40/155 (25%), Positives = 52/155 (33%), Gaps = 26/155 (16%)
Query: 155 HHVRLTGLEPNNKYYYQ--CGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYN 212
HV L GL P+ Y+Y+ GD S V RT PA G A G
Sbjct: 101 VHVDLRGLSPDQDYFYRFKAGD----ERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIG 156
Query: 213 TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT------PIHETYQPR 266
M+ EPD V+ +GD Y G D S + K E
Sbjct: 157 YMTAYKTMAKEEPDFVIHLGDYIYE-----YGPIPDEVSLNSWKNVVVTQHKSKEIETLD 211
Query: 267 WDYWGRFMQNLV--------SKVPIMVVEGNHEIE 293
DY GR+ + P +V +HE+
Sbjct: 212 -DYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVA 245
|
Length = 522 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 6e-04
Identities = 52/237 (21%), Positives = 84/237 (35%), Gaps = 47/237 (19%)
Query: 199 KRIAIVGDL---GLTYNTT----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS 251
RIA + DL L ++ + + +PDL+++ GD+T D
Sbjct: 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTN-----------DGEP 49
Query: 252 CSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFP 311
+ + + L P++VV GNH+ G A+S +F
Sbjct: 50 EEY------RRLK-------ELLARLELPAPVIVVPGNHDARVVNGE----AFSDQFFNR 92
Query: 312 SEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH----QYKWLEKDLANVDRSVTPWLV 367
S GG I L + + G Q WLE+ LA +V
Sbjct: 93 YAVLVGACSS------GGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVV 146
Query: 368 ATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAYERSNRVFNYT 422
H P S + R A E+ +L ++G V +V +GH+H ++ N T
Sbjct: 147 VLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGT 203
|
Length = 301 |
| >gnl|CDD|220234 pfam09423, PhoD, PhoD-like phosphatase | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 6e-04
Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 25/153 (16%)
Query: 156 HVRLTGLEPNNKYYYQ--CGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGD----LGL 209
V +TGL P +Y+Y+ G + S V RT PA G R A+ G
Sbjct: 65 KVDVTGLPPGRRYFYRFRAGG----STSPVGRTRTAPAPGAAVDRLRFAVASCQNYEQGY 120
Query: 210 TYNTTCTINHMSSNE-PDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 268
+N HM+ + PD VL +GD Y + G + + P HE D
Sbjct: 121 -FN---AYRHMARRDDPDFVLHLGDYIYEYGPIGGGGYGNLVREHKGR-PAHEAVT-LAD 174
Query: 269 YWGRFMQNLVS--------KVPIMVVEGNHEIE 293
Y GR+ Q VP +V +HE+
Sbjct: 175 YRGRYAQYKSDPDLQAAHAAVPWIVTWDDHEVA 207
|
Length = 452 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 552 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.98 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.91 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.9 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.9 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.9 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.88 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.87 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.81 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.77 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.72 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.67 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.66 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.65 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.64 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.63 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.62 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.58 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.54 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.53 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.52 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.48 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.47 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.47 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.46 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.43 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.41 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.3 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.25 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.2 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.19 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.18 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.13 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.07 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.95 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.92 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.92 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.91 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.87 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.87 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.86 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.83 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.83 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.82 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.77 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.71 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.71 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.7 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.7 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.66 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.61 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.58 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.57 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.46 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.42 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.37 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.32 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.3 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.29 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.27 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.27 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.26 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.16 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.15 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.14 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.13 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.08 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.08 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 98.04 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.01 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.95 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.93 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.92 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.92 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.89 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.77 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.74 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.65 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.6 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.53 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.51 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.46 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.42 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.31 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.2 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.16 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.13 | |
| PHA02239 | 235 | putative protein phosphatase | 97.09 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.03 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.02 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 96.92 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.78 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 96.77 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.77 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.66 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.63 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.32 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.21 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.14 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.11 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.03 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 95.94 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 95.91 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 95.87 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.86 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 95.67 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.6 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 95.49 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.48 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 94.19 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 93.64 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 93.47 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 93.24 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 93.21 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 92.91 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 92.32 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 92.15 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 91.73 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 91.13 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 90.9 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 89.57 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 89.5 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 88.42 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 87.96 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 87.24 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 86.52 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 86.31 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 84.46 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 83.47 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 80.24 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-83 Score=662.72 Aligned_cols=422 Identities=39% Similarity=0.641 Sum_probs=363.6
Q ss_pred CCCCccCCCCCccccccccCCCCCCCCCCCCCcccccCCCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCC
Q 008826 34 IPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTV 113 (552)
Q Consensus 34 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~ 113 (552)
.+....|+..+..++++++++-....++...|++. +.||||||++++..++|+|+|.|.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~peQvhlS~~~~~~~m~VswvT~~~~------------- 69 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVV-----NSPEQVHLSFTDNLNEMRVSWVTGDGE------------- 69 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcccC-----CCCCeEEEeccCCCCcEEEEEeCCCCC-------------
Confidence 35556688888999999998888888777777554 569999999999888999999998753
Q ss_pred ccEEEEecCCCCCceE-EEEEEEEeeeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCC
Q 008826 114 ASFVRYGTSRTNLNHE-ATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPAS 192 (552)
Q Consensus 114 ~~~V~yg~~~~~~~~~-a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~ 192 (552)
.++|+||+.+...... +.+.+..+...+.. -+|++|++|+|+|++|+|+|+||||||++. .||++|+|+|+|.
T Consensus 70 ~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~---~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~--~wS~~f~F~t~p~- 143 (452)
T KOG1378|consen 70 ENVVRYGEVKDKLDNSAARGMTEAWTDGYAN---GWRDSGYIHDAVMKNLEPNTRYYYQVGSDL--KWSEIFSFKTPPG- 143 (452)
T ss_pred CceEEEeecCCCccccccccceEEEeccccc---ccceeeeEeeeeecCCCCCceEEEEeCCCC--CcccceEeECCCC-
Confidence 3799999877664322 35666655554432 247899999999999999999999999987 6999999999982
Q ss_pred CCCCCceEEEEEeCCCCCCChHHHHHHHHhCC-CCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHH
Q 008826 193 GPQSYPKRIAIVGDLGLTYNTTCTINHMSSNE-PDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (552)
Q Consensus 193 ~~~~~~~rfavigD~~~~~~~~~~l~~l~~~~-pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~ 271 (552)
...+.+|+++||+|.+.....++....++. +|+|||+|||+|++.+.+ .+||+|+
T Consensus 144 --~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n----------------------~~wD~f~ 199 (452)
T KOG1378|consen 144 --QDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSN----------------------WQWDEFG 199 (452)
T ss_pred --ccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCc----------------------cchHHHH
Confidence 224899999999999877767777777654 999999999999874410 5899999
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC--CCcHHHHH
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--DKSGHQYK 349 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~--~~~~~Q~~ 349 (552)
++++++++.+|+|++.||||++..... .|..|.+||.||.+++++..++||||++|++|||+|+|+.++ ....+|++
T Consensus 200 r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~ 278 (452)
T KOG1378|consen 200 RQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQ 278 (452)
T ss_pred hhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHH
Confidence 999999999999999999999865443 799999999999998888889999999999999999999875 35789999
Q ss_pred HHHHHHhcccCCCCCEEEEEcCCCcccCCCC-CCchhH--HHHHHHHHHHHHcCCcEEEEccccCceeeeecccccc---
Q 008826 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSS-HYREAE--CMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL--- 423 (552)
Q Consensus 350 WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~-~~~~~~--~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~--- 423 (552)
||+++|++++|+++||+||+.|+|||++... ++++.+ .+|..||+||.+++||+||+||+|+|||++|++|.++
T Consensus 279 WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~ 358 (452)
T KOG1378|consen 279 WLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTG 358 (452)
T ss_pred HHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeecc
Confidence 9999999999877999999999999999865 666655 8899999999999999999999999999999999887
Q ss_pred -------CCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCC
Q 008826 424 -------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESS 496 (552)
Q Consensus 424 -------~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~ 496 (552)
+++|++||++|+||+.|+.+.. + .+||+|||||+.+
T Consensus 359 ~~~~~~~d~~aPvyI~~G~~G~~e~~~~~--------------------------~-----------~~~p~~Sa~R~~d 401 (452)
T KOG1378|consen 359 WGPVHLVDGMAPIYITVGDGGNHEHLDPF--------------------------S-----------SPQPEWSAFREGD 401 (452)
T ss_pred CCcccccCCCCCEEEEEccCCcccccCcc--------------------------c-----------CCCCccccccccc
Confidence 8899999999999999886531 1 2689999999999
Q ss_pred ceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeCCCCCCCCC
Q 008826 497 FGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPFHG 541 (552)
Q Consensus 497 ~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~~~~~~~~~ 541 (552)
|||++|+++|.||+.|+|+|++|.++.+.|+|||+|+...|....
T Consensus 402 fG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~ 446 (452)
T KOG1378|consen 402 FGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGV 446 (452)
T ss_pred CCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCcccccc
Confidence 999999999999999999999998889999999999988765443
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-79 Score=649.91 Aligned_cols=378 Identities=45% Similarity=0.822 Sum_probs=330.2
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccccc
Q 008826 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
+...|+||||++++ +++|+|+|.|.+. ..+.|+||++.+.+..+|.|++.+|+.. ..|++
T Consensus 40 ~~~~P~qvhls~~~-~~~m~V~W~T~~~-------------~~~~V~yG~~~~~l~~~a~g~~~~~~~~------~~~~~ 99 (427)
T PLN02533 40 DPTHPDQVHISLVG-PDKMRISWITQDS-------------IPPSVVYGTVSGKYEGSANGTSSSYHYL------LIYRS 99 (427)
T ss_pred CCCCCceEEEEEcC-CCeEEEEEECCCC-------------CCCEEEEecCCCCCcceEEEEEEEEecc------ccccC
Confidence 34689999999997 8999999999864 2478999999999999999998888631 24678
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEc
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLV 231 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~~~~~~~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~ 231 (552)
+++|+|+|+||+|+|+|+|||+.. .+|++++|+|+|.. .++||+++||+|.......+++++.+.+|||||++
T Consensus 100 g~iH~v~l~~L~p~T~Y~Yrvg~~---~~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 100 GQINDVVIGPLKPNTVYYYKCGGP---SSTQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred CeEEEEEeCCCCCCCEEEEEECCC---CCccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 999999999999999999999965 46899999998853 37999999999977666678999988999999999
Q ss_pred CCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccc--cCcchHHhhhhcC
Q 008826 232 GDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFA 309 (552)
Q Consensus 232 GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~--~~~~f~~y~~~f~ 309 (552)
||++|++. |+.+|+.|.+.++++.+.+|+|+++||||..... ....|..|..+|.
T Consensus 173 GDl~y~~~-----------------------~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~ 229 (427)
T PLN02533 173 GDLSYANF-----------------------YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWR 229 (427)
T ss_pred Cccccccc-----------------------hHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhccc
Confidence 99998642 3578999999999999999999999999986432 2356788999999
Q ss_pred CCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch--hHH
Q 008826 310 FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AEC 387 (552)
Q Consensus 310 ~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~--~~~ 387 (552)
||..+.+...+.||||++|++|||+||++.++....+|++||+++|++++++++||+||++|+|+|++...+..+ ...
T Consensus 230 mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~ 309 (427)
T PLN02533 230 MPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVG 309 (427)
T ss_pred CCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHH
Confidence 998776677889999999999999999998888889999999999999988889999999999999876544322 245
Q ss_pred HHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcc
Q 008826 388 MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGF 467 (552)
Q Consensus 388 ~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 467 (552)
+|+.|++||.+++||++|+||+|.|||++|+++++++++|++||++|+||+.|++...
T Consensus 310 ~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~---------------------- 367 (427)
T PLN02533 310 MKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATK---------------------- 367 (427)
T ss_pred HHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccc----------------------
Confidence 7889999999999999999999999999999999999999999999999998875321
Q ss_pred cccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeCCC
Q 008826 468 CATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPD 535 (552)
Q Consensus 468 ~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~~~ 535 (552)
| +.++|+||+||+.+|||++|+|+|+|||+|+|++++|+++.|.|+|||.|...
T Consensus 368 -------------~-~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~ 421 (427)
T PLN02533 368 -------------Y-IDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLT 421 (427)
T ss_pred -------------c-CCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccC
Confidence 1 14688999999999999999999999999999999988778999999999855
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=384.70 Aligned_cols=276 Identities=44% Similarity=0.770 Sum_probs=222.1
Q ss_pred CceEEEEEeCCCCC-CChHHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHH
Q 008826 197 YPKRIAIVGDLGLT-YNTTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (552)
Q Consensus 197 ~~~rfavigD~~~~-~~~~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~ 273 (552)
.++||+++||+|.. .....+++++.+ .+|||||++||++|++... .+.+|+.|++.
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~---------------------~~~~~~~~~~~ 61 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN---------------------NGSRWDTFMRQ 61 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc---------------------cchhHHHHHHH
Confidence 37999999999973 456778888887 7899999999999864210 12579999999
Q ss_pred HHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC---CCcHHHHHH
Q 008826 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY---DKSGHQYKW 350 (552)
Q Consensus 274 l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~---~~~~~Q~~W 350 (552)
++++.+.+|+++++||||............+..++.++........+.||+|++|++|||+||++... ....+|++|
T Consensus 62 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 62 IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999999999999997543322111111123344433344568899999999999999998665 568999999
Q ss_pred HHHHHhcccCCCCCEEEEEcCCCcccCCCCCCc--hhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc------
Q 008826 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT------ 422 (552)
Q Consensus 351 L~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~------ 422 (552)
|+++|+++++.+++|+||++|+|+|+....... .....++.|++||++|+|+++|+||+|.|+|++|+++++
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~ 221 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccc
Confidence 999999987667799999999999987544332 245678999999999999999999999999999998865
Q ss_pred --cCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCCceEE
Q 008826 423 --LDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHG 500 (552)
Q Consensus 423 --~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~ 500 (552)
.+++|++||++|+||+.++..... ...++|++++...+||+
T Consensus 222 ~~~~~~g~~yiv~G~~G~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~g~~ 264 (294)
T cd00839 222 PYSNPKGPVHIVIGAGGNDEGLDPFS-------------------------------------APPPAWSAFRESDYGFG 264 (294)
T ss_pred cccCCCccEEEEECCCccccCcCccc-------------------------------------CCCCCceEEEeccCCEE
Confidence 367899999999999976532100 12357999999999999
Q ss_pred EEEEecCCcEEEEEEEecCCCceeeEEEEEEe
Q 008826 501 ILEVKNETWALWTWHRNQDSNNKVGDQIYIVR 532 (552)
Q Consensus 501 ~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k 532 (552)
+|+|.|+|+|.|+|+++.+| +|+|+|+|+|
T Consensus 265 ~~~~~~~t~l~~~~~~~~~g--~v~D~f~i~k 294 (294)
T cd00839 265 RLTVHNSTHLHFEWIRNDDG--VVIDSFWIIK 294 (294)
T ss_pred EEEEEecCeEEEEEEECCCC--eEEEEEEEeC
Confidence 99999999999999999888 9999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=280.67 Aligned_cols=257 Identities=19% Similarity=0.288 Sum_probs=187.6
Q ss_pred ceEEEEEeCCCCCCChHHHHHHHH-----hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH-HH
Q 008826 198 PKRIAIVGDLGLTYNTTCTINHMS-----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY-WG 271 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~l~~l~-----~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~-~~ 271 (552)
.++|+++||+|.+...+..+++.+ +.++||||.+||+. .++.. + ...++|.. |.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~--s-----------------v~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVD--G-----------------LNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCC--C-----------------ccchhHHhhHh
Confidence 689999999997655454433322 46899999999998 43321 1 12366765 44
Q ss_pred HHHHHhh--hcCCeEEecCCchhcccccCcc--hH------------H------hhhhcCCCCCCCCCCCcceEEE----
Q 008826 272 RFMQNLV--SKVPIMVVEGNHEIEAQAGNQT--FV------------A------YSSRFAFPSEESGSLSSFYYSF---- 325 (552)
Q Consensus 272 ~~l~~l~--~~iP~~~v~GNHD~~~~~~~~~--f~------------~------y~~~f~~P~~~~~~~~~~yYsf---- 325 (552)
+...... .++||++|+||||+..+...+. +. . ...||.||. .||.+
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f 157 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHF 157 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeee
Confidence 5554444 6899999999999975543221 10 1 125777774 57754
Q ss_pred Ec-------------CeEEEEEeccccc-----C-CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhH
Q 008826 326 NA-------------GGIHFIMLGAYIS-----Y-DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAE 386 (552)
Q Consensus 326 ~~-------------G~v~fI~Ldt~~~-----~-~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~ 386 (552)
.. ..+.||+|||... + .....|++||+++|+.+. +.++|+||+.|||+|+++.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~-k~a~WkIVvGHhPIySsG~h--g~~~ 234 (394)
T PTZ00422 158 TDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAP-KIADYIIVVGDKPIYSSGSS--KGDS 234 (394)
T ss_pred ecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhhc-cCCCeEEEEecCceeecCCC--CCCH
Confidence 21 2389999999631 1 225789999999997543 56789999999999998643 2345
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCc
Q 008826 387 CMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGG 466 (552)
Q Consensus 387 ~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 466 (552)
+++..|++||++|+||++|+||+|.+|+.. ++|+.||++|+||...+...
T Consensus 235 ~L~~~L~PLL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~~---------------------- 284 (394)
T PTZ00422 235 YLSYYLLPLLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKSI---------------------- 284 (394)
T ss_pred HHHHHHHHHHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCCC----------------------
Confidence 688999999999999999999999999974 46899999999998543210
Q ss_pred ccccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeCCCC
Q 008826 467 FCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDK 536 (552)
Q Consensus 467 ~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~~~~ 536 (552)
..++|+.|....+||..+++ +.+.+.++|+.+.+| ++++++.+.+.+..
T Consensus 285 ------------------~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G--kvL~~~~~~~~~~~ 333 (394)
T PTZ00422 285 ------------------MKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG--EVLYTHKQPLKKRK 333 (394)
T ss_pred ------------------CCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC--cEEEEeeecccchh
Confidence 12356778888899999998 888999999976667 89999999766443
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=265.13 Aligned_cols=243 Identities=24% Similarity=0.371 Sum_probs=171.9
Q ss_pred eEEEEEeCCCCCC-C-hHH---HHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHH-HHHH
Q 008826 199 KRIAIVGDLGLTY-N-TTC---TINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW-DYWG 271 (552)
Q Consensus 199 ~rfavigD~~~~~-~-~~~---~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~w-d~~~ 271 (552)
++|+++||+|... . ... .+.++. +.+|||||++||++|+++... .+..+| +.+.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~-------------------~~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGS-------------------VDDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCC-------------------CcchHHHHHHH
Confidence 4899999999852 2 222 233333 368999999999998753210 112344 3455
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccCc-chHH--hhhhcCCCCCCCCCCCcceEEEEcC------eEEEEEecccccC-
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TFVA--YSSRFAFPSEESGSLSSFYYSFNAG------GIHFIMLGAYISY- 341 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~-~f~~--y~~~f~~P~~~~~~~~~~yYsf~~G------~v~fI~Ldt~~~~- 341 (552)
+.++.+..++|+++++||||........ .+.. +..+|.+ ...||+|+++ +++||+|||....
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~ 133 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTM--------PAYYYRVSFPFPSSDTTVEFIMIDTVPLCG 133 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccC--------cchheEEEeecCCCCCEEEEEEEeChhHcC
Confidence 5555555689999999999987432111 1111 1222333 3479999998 7999999997431
Q ss_pred --------------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEc
Q 008826 342 --------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNG 407 (552)
Q Consensus 342 --------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsG 407 (552)
....+|++||+++|++.. .+|+||++|+|+++...... ....++.|++++++++|+++|+|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~~--~~~~~~~l~~l~~~~~v~~vl~G 208 (277)
T cd07378 134 NSDDIASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHGP--TSCLVDRLLPLLKKYKVDAYLSG 208 (277)
T ss_pred ccccccccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCCC--cHHHHHHHHHHHHHcCCCEEEeC
Confidence 236899999999999864 37999999999997643221 24668899999999999999999
Q ss_pred cccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCC
Q 008826 408 HVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQP 487 (552)
Q Consensus 408 H~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p 487 (552)
|+|.+++..+ ...|+.||++|+||...+..... ...+|
T Consensus 209 H~H~~~~~~~------~~~~~~~i~~G~~~~~~~~~~~~------------------------------------~~~~~ 246 (277)
T cd07378 209 HDHNLQHIKD------DGSGTSFVVSGAGSKARPSVKHI------------------------------------DKVPQ 246 (277)
T ss_pred Ccccceeeec------CCCCcEEEEeCCCcccCCCCCcc------------------------------------Ccccc
Confidence 9999998854 23699999999988865422100 01234
Q ss_pred CccceeeCCceEEEEEEecCCcEEEEEEE
Q 008826 488 DYSAFRESSFGHGILEVKNETWALWTWHR 516 (552)
Q Consensus 488 ~~sa~~~~~~G~~~l~v~n~t~~~~~~~~ 516 (552)
.|+.++...+||.+++|. .+.+.++|+.
T Consensus 247 ~~~~~~~~~~Gy~~i~v~-~~~l~~~~~~ 274 (277)
T cd07378 247 FFSGFTSSGGGFAYLELT-KEELTVRFYD 274 (277)
T ss_pred cccccccCCCCEEEEEEe-cCEEEEEEEC
Confidence 678888899999999995 5589999985
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=235.69 Aligned_cols=204 Identities=23% Similarity=0.366 Sum_probs=147.8
Q ss_pred ceEEEEEeCCCCCCC-----------------hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 198 PKRIAIVGDLGLTYN-----------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 198 ~~rfavigD~~~~~~-----------------~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
+++|+++||+|.+.. ....++.+.+. +||||+++||+++. +..
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~------~~~------------ 65 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNA------MPG------------ 65 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCC------Ccc------------
Confidence 799999999998731 12345556555 89999999999963 221
Q ss_pred cccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccc
Q 008826 259 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY 338 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~ 338 (552)
.+....+|+.+.+.++.+...+|+++++||||+........+..|...| +..||+|++|+++||+||+.
T Consensus 66 -~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~ 134 (262)
T cd07395 66 -DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQ 134 (262)
T ss_pred -hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHh----------CCcceEEEECCEEEEEeccc
Confidence 0111245777777777776789999999999986433223334444444 23589999999999999996
Q ss_pred ccC------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCC----chhHHHHHHHHHHHHHcCCcEEEEcc
Q 008826 339 ISY------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY----REAECMRVEMEALLYSYGVDIVFNGH 408 (552)
Q Consensus 339 ~~~------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~----~~~~~~r~~l~~ll~~~~VdlvlsGH 408 (552)
... ....+|++||+++|+++.+.+.+++||++|+|++....... ......+++|.++|++++|+++|+||
T Consensus 135 ~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH 214 (262)
T cd07395 135 LFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGH 214 (262)
T ss_pred cccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECc
Confidence 432 23579999999999997544567899999999986432211 12235678999999999999999999
Q ss_pred ccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 409 VHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 409 ~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
+|.+++.. -.|+.+++++++|.
T Consensus 215 ~H~~~~~~--------~~g~~~~~~~~~~~ 236 (262)
T cd07395 215 YHRNAGGR--------YGGLEMVVTSAIGA 236 (262)
T ss_pred cccCCceE--------ECCEEEEEcCceec
Confidence 99887753 23777887777765
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-24 Score=233.82 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=143.0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEeCCCCCCChHHHHHHHHh-CCCCEEE
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSS-NEPDLVL 229 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~~~~~~~~rfavigD~~~~~~~~~~l~~l~~-~~pDfvl 229 (552)
..++++|.|+||+|+|+|+||+........|.+++|||+|..... ++||+++||.+.......+++++.+ .+|||+|
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~--~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPD--PFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred CCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCC--ceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 458999999999999999999998644578899999999765443 6999999999886566788899988 6999999
Q ss_pred EcCCccccccc--ccCCCCCCCC--cCCCCCCccccccHHHHHHHH--HHHHHhhhcCCeEEecCCchhcccccC-----
Q 008826 230 LVGDVTYANLY--LTNGTGSDCY--SCSFSKTPIHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGN----- 298 (552)
Q Consensus 230 ~~GDl~Y~d~~--~~~G~~~~cy--~~~~~~~~~~e~y~~~wd~~~--~~l~~l~~~iP~~~v~GNHD~~~~~~~----- 298 (552)
|+||.+|++.. ........-- ..........+.|+.+|..+. ..++.+.+++|++.++.+||+.++...
T Consensus 138 ~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~ 217 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAEN 217 (453)
T ss_dssp E-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-ST
T ss_pred EeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCcccc
Confidence 99999999741 0000000000 000011234456766666553 457778889999999999999765331
Q ss_pred -------------cchHHhhhhcCCCCCC-CCCCCcceEEEEcCe-EEEEEecccccCC---------------------
Q 008826 299 -------------QTFVAYSSRFAFPSEE-SGSLSSFYYSFNAGG-IHFIMLGAYISYD--------------------- 342 (552)
Q Consensus 299 -------------~~f~~y~~~f~~P~~~-~~~~~~~yYsf~~G~-v~fI~Ldt~~~~~--------------------- 342 (552)
..+.+|.+........ .+.....|++|.+|+ +.|++||++....
T Consensus 218 ~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~m 297 (453)
T PF09423_consen 218 HQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTM 297 (453)
T ss_dssp T---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--S
T ss_pred ccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCc
Confidence 0112333332222111 122456799999999 9999999863221
Q ss_pred CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCC-----------CCCCchhHHHHHHHHHHHHHcCCc--EEEEccc
Q 008826 343 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSY-----------SSHYREAECMRVEMEALLYSYGVD--IVFNGHV 409 (552)
Q Consensus 343 ~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~-----------~~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~ 409 (552)
.+.+|++||++.|++ +.++|+|+..-.|+.... ...|......|++|.++|.+.++. ++|+|++
T Consensus 298 LG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDv 374 (453)
T PF09423_consen 298 LGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDV 374 (453)
T ss_dssp S-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SS
T ss_pred CCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCc
Confidence 278999999999998 458999999888775432 234555567799999999988875 8999999
Q ss_pred cCceeee
Q 008826 410 HAYERSN 416 (552)
Q Consensus 410 H~yeR~~ 416 (552)
|......
T Consensus 375 H~~~~~~ 381 (453)
T PF09423_consen 375 HASAASR 381 (453)
T ss_dssp SSEEEEE
T ss_pred chheeee
Confidence 9876664
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-23 Score=204.58 Aligned_cols=192 Identities=23% Similarity=0.327 Sum_probs=136.1
Q ss_pred EEEEEeCCCCCCC-------------hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 200 RIAIVGDLGLTYN-------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 200 rfavigD~~~~~~-------------~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
||+++||+|.+.. ..++++.+.+. +||+||++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 6999999998753 13455666665 89999999999952 22 2
Q ss_pred HHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC---
Q 008826 265 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--- 341 (552)
Q Consensus 265 ~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~--- 341 (552)
..|+.+.+.++.+ ++|++.++||||... .+...|..... .....+|+|+.++++||+||+....
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~ 123 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRA--------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHG 123 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHH--------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcC
Confidence 3456666777766 799999999999842 12222211110 2345689999999999999986432
Q ss_pred -CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceeeeec
Q 008826 342 -DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRV 418 (552)
Q Consensus 342 -~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~pv 418 (552)
....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|......
T Consensus 124 ~~~~~~ql~wL~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-- 198 (240)
T cd07402 124 GELCAAQLDWLEAALAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS-- 198 (240)
T ss_pred CEECHHHHHHHHHHHHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--
Confidence 236889999999999864 2347778888876643211111 112367899999999 99999999999876553
Q ss_pred cccccCCCCcEEEEECCCCCc
Q 008826 419 FNYTLDPCGPVHITIGDGGNL 439 (552)
Q Consensus 419 ~n~~~~~~G~vyiv~G~gG~~ 439 (552)
-+|+.++++|+.|..
T Consensus 199 ------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 199 ------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred ------ECCEEEEEcCcceee
Confidence 368899999887763
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-23 Score=208.83 Aligned_cols=197 Identities=23% Similarity=0.307 Sum_probs=136.1
Q ss_pred eEEEEEeCCCCCCC--------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 199 KRIAIVGDLGLTYN--------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 199 ~rfavigD~~~~~~--------------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
|||+++||+|.... ..++++++.+.+||+||++||+++. +.. ...
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 69999999996542 1345667777789999999999952 210 012
Q ss_pred HHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc----
Q 008826 265 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS---- 340 (552)
Q Consensus 265 ~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~---- 340 (552)
..|+.+.+.++.+ ++|+++++||||...... .+.. +... ...+..||+|++++++||+||+...
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~-----~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~ 127 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSR-----EYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALG 127 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccH-----hhhh-cccc----cCCCCceEEEecCCcEEEEEeCCcccccc
Confidence 4566666666655 689999999999864321 1111 0001 1234579999999999999998521
Q ss_pred ------------------------------CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHH
Q 008826 341 ------------------------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390 (552)
Q Consensus 341 ------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~ 390 (552)
.....+|++||+++|++...+. .++||++|+|++...... ......++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~-~~viV~~Hhp~~~~~~~~-~~~~~~~~ 205 (267)
T cd07396 128 RPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANG-EKVIIFSHFPLHPESTSP-HGLLWNHE 205 (267)
T ss_pred CCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcC-CeEEEEEeccCCCCCCCc-cccccCHH
Confidence 1235899999999999875332 458999999987654211 11112257
Q ss_pred HHHHHHHHc-CCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 391 EMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 391 ~l~~ll~~~-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
.+.++|+++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 206 ~~~~ll~~~~~V~~v~~GH~H~~~~~~--------~~gi~~~~~~a~~~ 246 (267)
T cd07396 206 EVLSILRAYGCVKACISGHDHEGGYAQ--------RHGIHFLTLEGMVE 246 (267)
T ss_pred HHHHHHHhCCCEEEEEcCCcCCCCccc--------cCCeeEEEechhhc
Confidence 889999996 89999999999987542 46888998877544
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-23 Score=210.32 Aligned_cols=283 Identities=22% Similarity=0.292 Sum_probs=197.7
Q ss_pred CccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCC
Q 008826 113 VASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPAS 192 (552)
Q Consensus 113 ~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~ 192 (552)
+.-.+||++..+..+.+..|+... .-...+.++|.++||+|+|.|+||+...+ ..|.+++|||+|..
T Consensus 70 v~V~wEvs~~~~f~~ivr~gt~~a-----------~p~~dhtv~v~~~gL~P~~~yfYRf~~~~--~~spvGrtrTapa~ 136 (522)
T COG3540 70 VPVIWEVSTDENFSNIVRKGTVIA-----------SPELDHTVHVDLRGLSPDQDYFYRFKAGD--ERSPVGRTRTAPAP 136 (522)
T ss_pred cceEEEecCCccHHHHHhcCCccC-----------CcccCceEEEeccCCCCCceEEEEEeeCC--ccccccccccCCCC
Confidence 345678887776544443333211 11245789999999999999999999887 78899999999998
Q ss_pred CCCCCceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcC-CCCC-----CccccccHHH
Q 008826 193 GPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSC-SFSK-----TPIHETYQPR 266 (552)
Q Consensus 193 ~~~~~~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~-~~~~-----~~~~e~y~~~ 266 (552)
+....-++|++.++.|...+...+.+.|.+.+|||+||+||.+|+++....-.......+ ...+ ....+.|+.+
T Consensus 137 ~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~r 216 (522)
T COG3540 137 GRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGR 216 (522)
T ss_pred CCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhH
Confidence 765445666677777777677788999999999999999999999753210000000000 1111 2344678888
Q ss_pred HHHHH--HHHHHhhhcCCeEEecCCchhcccccC-------------------cchHHhhhhcCCCCCCCC--CCCcceE
Q 008826 267 WDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGN-------------------QTFVAYSSRFAFPSEESG--SLSSFYY 323 (552)
Q Consensus 267 wd~~~--~~l~~l~~~iP~~~v~GNHD~~~~~~~-------------------~~f~~y~~~f~~P~~~~~--~~~~~yY 323 (552)
|..++ ..++...+..|+++.+.+||..++... ..+++|.+. ||..... .....|.
T Consensus 217 ya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~--mPiR~~~~p~~~~lYR 294 (522)
T COG3540 217 YAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEH--MPIRYSSLPTDGRLYR 294 (522)
T ss_pred HhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHHh--CccccccCCccceeee
Confidence 87764 567888899999999999999876321 122444443 4543222 2357899
Q ss_pred EEEcCe-EEEEEecccccC------C----------------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCC--
Q 008826 324 SFNAGG-IHFIMLGAYISY------D----------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSY-- 378 (552)
Q Consensus 324 sf~~G~-v~fI~Ldt~~~~------~----------------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~-- 378 (552)
+|.||+ +.|.+||++... + .+.+|.+||+..|.+ +++.|.|+..-.|+---.
T Consensus 295 ~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d 371 (522)
T COG3540 295 SFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFD 371 (522)
T ss_pred eeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecC
Confidence 999998 679999986433 1 278999999999999 688999998888763211
Q ss_pred -----------CCCCchhHHHHHHHHHHHHHcCCc--EEEEccccCce
Q 008826 379 -----------SSHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYE 413 (552)
Q Consensus 379 -----------~~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~ye 413 (552)
...+.....-|+.|..++++.++. ++|+|++|...
T Consensus 372 ~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 372 GSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred CCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 012233445689999999999875 89999999543
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=195.02 Aligned_cols=204 Identities=22% Similarity=0.317 Sum_probs=136.1
Q ss_pred CceEEEEEeCCCCCCC--hHHHHH---HHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH-
Q 008826 197 YPKRIAIVGDLGLTYN--TTCTIN---HMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY- 269 (552)
Q Consensus 197 ~~~rfavigD~~~~~~--~~~~l~---~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~- 269 (552)
..++|+++||+|.... ...+.. .|. +.+.||||.+||++|.++..+. +.+++..
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~-------------------~Dp~Fq~s 102 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSE-------------------NDPRFQDS 102 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCC-------------------CChhHHhh
Confidence 3799999999996532 222222 232 3689999999999997654221 1233322
Q ss_pred HHHHHHHhhhcCCeEEecCCchhcccccCc---chHHhhhhcCCCCCCCCCCCcceEE------EEcCeEEEEEeccccc
Q 008826 270 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ---TFVAYSSRFAFPSEESGSLSSFYYS------FNAGGIHFIMLGAYIS 340 (552)
Q Consensus 270 ~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~---~f~~y~~~f~~P~~~~~~~~~~yYs------f~~G~v~fI~Ldt~~~ 340 (552)
|.+....-..+.||+.+.||||+.++...+ .+.....||..|.. ||. +..-++.++++|+...
T Consensus 103 F~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~ 174 (336)
T KOG2679|consen 103 FENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTL 174 (336)
T ss_pred hhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccH--------Hhhcceeeeeeccccccchhhheec
Confidence 223322223467999999999998775433 24555567766541 211 1112344555554321
Q ss_pred -------CC-------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEE
Q 008826 341 -------YD-------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFN 406 (552)
Q Consensus 341 -------~~-------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdlvls 406 (552)
+. ....|+.||+..|++ +.++|+||+.|+|+.+.. +.+...++++.|.+||+.++||++++
T Consensus 175 ~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~n 249 (336)
T KOG2679|consen 175 CTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYIN 249 (336)
T ss_pred ccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEe
Confidence 11 146789999999999 578999999999998864 44567799999999999999999999
Q ss_pred ccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 407 GHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 407 GH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
||+|..|..-- ...++-|+++|+|..
T Consensus 250 GHDHcLQhis~------~e~~iqf~tSGagSk 275 (336)
T KOG2679|consen 250 GHDHCLQHISS------PESGIQFVTSGAGSK 275 (336)
T ss_pred cchhhhhhccC------CCCCeeEEeeCCccc
Confidence 99999988741 134566777776654
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-21 Score=194.24 Aligned_cols=191 Identities=19% Similarity=0.255 Sum_probs=123.5
Q ss_pred ceEEEEEeCCCCCC---------C----hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccc
Q 008826 198 PKRIAIVGDLGLTY---------N----TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 262 (552)
Q Consensus 198 ~~rfavigD~~~~~---------~----~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~ 262 (552)
++||++++|+|+.. + ..++++++.+. +|||||++||++. +|.
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~------~~~----------------- 70 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ------DHS----------------- 70 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC------CCC-----------------
Confidence 79999999999732 1 23455666543 6999999999994 222
Q ss_pred cHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC-
Q 008826 263 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY- 341 (552)
Q Consensus 263 y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~- 341 (552)
...+..+.+.++.+ .+|+++++||||... .+..+.....+ ...++.+..++++||+||+....
T Consensus 71 -~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~-----~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~ 134 (275)
T PRK11148 71 -SEAYQHFAEGIAPL--RKPCVWLPGNHDFQP-----AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGV 134 (275)
T ss_pred -HHHHHHHHHHHhhc--CCcEEEeCCCCCChH-----HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCC
Confidence 13455566666665 689999999999842 12222111111 12233445567999999996422
Q ss_pred ---CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceeee
Q 008826 342 ---DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSN 416 (552)
Q Consensus 342 ---~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~ 416 (552)
..+.+|++||+++|++... .+-+|+++|+|+.... ..... .....++|.++++++ +|+++|+||+|.....
T Consensus 135 ~~G~l~~~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~~-~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~- 210 (275)
T PRK11148 135 PHGELSEYQLEWLERKLADAPE--RHTLVLLHHHPLPAGC-AWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL- 210 (275)
T ss_pred cCCEeCHHHHHHHHHHHhhCCC--CCeEEEEcCCCCCCCc-chhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc-
Confidence 2468999999999998642 2335556566654421 11110 111246899999998 8999999999985433
Q ss_pred eccccccCCCCcEEEEECCCCC
Q 008826 417 RVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 417 pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
.-+|+.++++++.+.
T Consensus 211 -------~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 211 -------DWNGRRLLATPSTCV 225 (275)
T ss_pred -------eECCEEEEEcCCCcC
Confidence 135787777666554
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.4e-21 Score=191.31 Aligned_cols=192 Identities=21% Similarity=0.269 Sum_probs=127.0
Q ss_pred EEEEeCCCCCCCh--------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 201 IAIVGDLGLTYNT--------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 201 favigD~~~~~~~--------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
|++++|+|.+... ..+++.+.+.+||+|+++||++.... ..+. ....++.+|+.|.+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~--~~~~-------------~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKT--GNKL-------------PSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccc--cCCC-------------cccccHHHHHHHHH
Confidence 7899999987531 12345566789999999999994311 1110 01233567888888
Q ss_pred HHHHhh--hcCCeEEecCCchhcccccCcchHHhhhhc-CCCCCCCCCCCcceEE--EEcCeEEEEEeccccc-------
Q 008826 273 FMQNLV--SKVPIMVVEGNHEIEAQAGNQTFVAYSSRF-AFPSEESGSLSSFYYS--FNAGGIHFIMLGAYIS------- 340 (552)
Q Consensus 273 ~l~~l~--~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f-~~P~~~~~~~~~~yYs--f~~G~v~fI~Ldt~~~------- 340 (552)
.+.... ...|++.++||||............|..++ .... ....+|. ++.|+++||+||+...
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~ 141 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPF 141 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCC
Confidence 776643 258999999999996432222222222222 1110 1122333 3459999999999642
Q ss_pred ---CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeee
Q 008826 341 ---YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 417 (552)
Q Consensus 341 ---~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~p 417 (552)
.....+|++||+++|++.. +.+++||++|+|++...... . ...+ .+.++|++++|+++|+||+|.+++..|
T Consensus 142 ~~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~-~--~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 142 NFFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPS-A--KSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred ceeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCC-c--chhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 2246899999999999864 34579999999986533211 1 1122 389999999999999999999999655
Q ss_pred c
Q 008826 418 V 418 (552)
Q Consensus 418 v 418 (552)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 4
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.6e-19 Score=173.97 Aligned_cols=149 Identities=19% Similarity=0.270 Sum_probs=108.4
Q ss_pred eEEEEEeCCCCCCCh---------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT---------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 269 (552)
Q Consensus 199 ~rfavigD~~~~~~~---------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~ 269 (552)
|||++++|+|..... ..+++.+.+.+||+|+++||+++. +.. ..+|+.
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~------~~~-----------------~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDD------GDN-----------------DAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCC------CCC-----------------HHHHHH
Confidence 689999999975431 123344445789999999999953 210 257888
Q ss_pred HHHHHHHhh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHH
Q 008826 270 WGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 348 (552)
Q Consensus 270 ~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~ 348 (552)
+.+.++.+. ..+|+++++||||. ++.+|+ ....+|+
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~---------------------------------------~~~ld~----~~~~~ql 94 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDL---------------------------------------VLALEF----GPRDEVL 94 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcc---------------------------------------hhhCCC----CCCHHHH
Confidence 888888886 67999999999992 233333 2358999
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-----hHHHHHHHHHHHHHc-CCcEEEEccccCceeee
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-----AECMRVEMEALLYSY-GVDIVFNGHVHAYERSN 416 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-----~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~ 416 (552)
+||+++|++.. .+++|+++|+|++......... ....++.|++|++++ +|++||+||+|.+.+..
T Consensus 95 ~WL~~~L~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 95 QWANEVLKKHP---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred HHHHHHHHHCC---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 99999999853 2358999999988654321111 123356788999999 79999999999998775
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.4e-18 Score=173.23 Aligned_cols=191 Identities=20% Similarity=0.285 Sum_probs=126.8
Q ss_pred EeCCCCCCC---hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH--HHHHHHHHHHH
Q 008826 204 VGDLGLTYN---TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP--RWDYWGRFMQN 276 (552)
Q Consensus 204 igD~~~~~~---~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~--~wd~~~~~l~~ 276 (552)
+|+.+.... ..++++.+.+. +|||||++||+++.+.+.. ..+ ... .+..+.+.++.
T Consensus 43 ~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~----------------~~~-~~~~~~~~~~~~~l~~ 105 (296)
T cd00842 43 WGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQ----------------TPE-TLVLISISNLTSLLKK 105 (296)
T ss_pred CcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhh----------------chh-HHHHHHHHHHHHHHHH
Confidence 555554332 34567777776 8999999999996542210 000 011 24556666777
Q ss_pred hhhcCCeEEecCCchhccccc-------CcchHHhhhhcC--CCCCC-CCCCCcceEEEE-cCeEEEEEecccccC----
Q 008826 277 LVSKVPIMVVEGNHEIEAQAG-------NQTFVAYSSRFA--FPSEE-SGSLSSFYYSFN-AGGIHFIMLGAYISY---- 341 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~~~~~-------~~~f~~y~~~f~--~P~~~-~~~~~~~yYsf~-~G~v~fI~Ldt~~~~---- 341 (552)
....+|+++++||||...... ...+..+...|. ++... .....+.||++. .++++||+|||...+
T Consensus 106 ~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~ 185 (296)
T cd00842 106 AFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNF 185 (296)
T ss_pred hCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccCh
Confidence 778899999999999975421 122333333332 23211 112346789998 889999999996432
Q ss_pred -------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccCc
Q 008826 342 -------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAY 412 (552)
Q Consensus 342 -------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~y 412 (552)
....+|++||+++|+++++.. ..++|++|+|+....... ....+++|.+|+++|. |.++|+||+|..
T Consensus 186 ~~~~~~~~~~~~Ql~WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d 261 (296)
T cd00842 186 WLLGSNETDPAGQLQWLEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRD 261 (296)
T ss_pred hhhccCCCCHHHHHHHHHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccc
Confidence 234789999999999976433 347788899987643221 1345688999999996 788999999987
Q ss_pred eee
Q 008826 413 ERS 415 (552)
Q Consensus 413 eR~ 415 (552)
+..
T Consensus 262 ~~~ 264 (296)
T cd00842 262 EFR 264 (296)
T ss_pred eEE
Confidence 665
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-17 Score=152.53 Aligned_cols=188 Identities=23% Similarity=0.274 Sum_probs=100.7
Q ss_pred eEEEEEeCCCCCCChH-----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHH-H
Q 008826 199 KRIAIVGDLGLTYNTT-----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG-R 272 (552)
Q Consensus 199 ~rfavigD~~~~~~~~-----~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~-~ 272 (552)
+||+++||+|...... .......+.++|+||++||+++.. .. ...+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~------~~-----------------~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGG------NP-----------------SEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSS------SH-----------------HHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccc------cc-----------------cccchhhhcc
Confidence 6999999999986433 233444468999999999999642 10 11111111 1
Q ss_pred HHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcC-CCCCCCCCCCcceEEEEcCeEEEEEecccccCCCc---HHHH
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKS---GHQY 348 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~-~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~---~~Q~ 348 (552)
........+|+++++||||+................. ..........+...........+............ ..+.
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWW 137 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcc
Confidence 2344467899999999999974321111111111100 00000000000001111112222222211111122 2333
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCc--hhHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAY 412 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 412 (552)
.|+...++. ...+++||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 138 ~~~~~~~~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 138 LWLLLLLEA---KNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHE---EEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccc---ccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 333333333 45678999999999987543211 01235678999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-15 Score=151.83 Aligned_cols=169 Identities=18% Similarity=0.217 Sum_probs=109.0
Q ss_pred HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH----HHHHHHHhhhcCCeEEecC
Q 008826 214 TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY----WGRFMQNLVSKVPIMVVEG 288 (552)
Q Consensus 214 ~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~----~~~~l~~l~~~iP~~~v~G 288 (552)
.+.++.+.+ .+||+||++||+++. |... -..+|.. +.+.+.++...+|++.++|
T Consensus 34 r~~~~~~~~~l~PD~vv~lGDL~d~------G~~~---------------~~~~~~~~~~rf~~i~~~~~~~~pv~~VpG 92 (257)
T cd08163 34 RRNWRYMQKQLKPDSTIFLGDLFDG------GRDW---------------ADEYWKKEYNRFMRIFDPSPGRKMVESLPG 92 (257)
T ss_pred HHHHHHHHHhcCCCEEEEecccccC------CeeC---------------cHHHHHHHHHHHHHHhcCCCccceEEEeCC
Confidence 345555554 589999999999852 3311 0234543 3333333333579999999
Q ss_pred CchhcccccC--cchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc-----CCCcHHHHHHHHHHHhcccCC
Q 008826 289 NHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS-----YDKSGHQYKWLEKDLANVDRS 361 (552)
Q Consensus 289 NHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~-----~~~~~~Q~~WL~~~L~~~~r~ 361 (552)
|||+...... .....|.+.|. ..+|+|++|+++||+||+... .....+|.+||++.|+....
T Consensus 93 NHDig~~~~~~~~~~~rf~~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~- 161 (257)
T cd08163 93 NHDIGFGNGVVLPVRQRFEKYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK- 161 (257)
T ss_pred CcccCCCCCCCHHHHHHHHHHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-
Confidence 9998543211 23455666663 236899999999999999632 22356899999999987542
Q ss_pred CCCEEEEEcCCCcccCCCCCCc---h------------hH-HH-HHHHHHHHHHcCCcEEEEccccCceee
Q 008826 362 VTPWLVATWHPPWYSSYSSHYR---E------------AE-CM-RVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 362 ~~~w~Iv~~H~P~y~s~~~~~~---~------------~~-~~-r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
.. .+||++|+|+|........ + .+ .+ .+.-..||++.+..+||+||+|.|=..
T Consensus 162 ~~-p~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 162 SK-PRILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CC-cEEEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 22 3899999999865321110 0 00 11 234457788889999999999988554
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.9e-16 Score=151.57 Aligned_cols=191 Identities=17% Similarity=0.203 Sum_probs=117.2
Q ss_pred EEEEeCCCCCCC-----------hHHHHHHHHhC------CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 201 IAIVGDLGLTYN-----------TTCTINHMSSN------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 201 favigD~~~~~~-----------~~~~l~~l~~~------~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
|.+++|+|+... ..+.++++.+. +||+||++||+++. +.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~------~~------------------ 56 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA------MK------------------ 56 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC------CC------------------
Confidence 357899997731 13455555544 89999999999842 11
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc-C-
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS-Y- 341 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~-~- 341 (552)
........+.++.+ ..|+++|+||||+... ....+.+.+. .. +..-....++.++++.|+.++.... +
T Consensus 57 ~~~~~~~l~~l~~l--~~~v~~V~GNHD~~~~----~~~~~~~~l~--~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 57 LEEAKLDLAWIDAL--PGTKVLLKGNHDYWWG----SASKLRKALE--ES--RLALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred hHHHHHHHHHHHhC--CCCeEEEeCCccccCC----CHHHHHHHHH--hc--CeEEeccCcEEECCEEEEEEEeeCCCCC
Confidence 01222333344443 3578999999998421 1122222221 00 0000013445678889998763211 0
Q ss_pred ---------------CCcHHHHHHHHHHHhcccCCC-CCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEE
Q 008826 342 ---------------DKSGHQYKWLEKDLANVDRSV-TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 405 (552)
Q Consensus 342 ---------------~~~~~Q~~WL~~~L~~~~r~~-~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdlvl 405 (552)
.....|++||++.|++..... ..++|++.|+|++..... .+.+..++++++++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl 198 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICV 198 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEE
Confidence 113569999999999864322 246899999998764321 23677888999999999
Q ss_pred EccccCceeeeeccccccCCCCcEEEEECCC
Q 008826 406 NGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 406 sGH~H~yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
+||+|.+++..|+.. .-+|+.|+++.++
T Consensus 199 ~GH~H~~~~~~~~~~---~~~gi~~~~~~~~ 226 (232)
T cd07393 199 YGHLHGVGRDRAING---ERGGIRYQLVSAD 226 (232)
T ss_pred ECCCCCCcccccccc---eECCEEEEEEcch
Confidence 999999988766532 2357778766654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=147.45 Aligned_cols=150 Identities=21% Similarity=0.224 Sum_probs=96.8
Q ss_pred ceEEEEEeCCCCCCCh------------HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 198 PKRIAIVGDLGLTYNT------------TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 198 ~~rfavigD~~~~~~~------------~~~l~~-l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
.+||++++|+|..... ...+++ +.+.+||+||++||+++.... . .
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~--------------------~--~ 59 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT--------------------N--D 59 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC--------------------c--h
Confidence 5899999999986532 123333 335689999999999964210 0 0
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCC
Q 008826 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 343 (552)
Q Consensus 265 ~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~ 343 (552)
..+..+.++++.+. .++|+++++||||. ....
T Consensus 60 ~~~~~~~~~~~~l~~~~~p~~~~~GNHD~-----------------------------------------------~g~l 92 (199)
T cd07383 60 NSTSALDKAVSPMIDRKIPWAATFGNHDG-----------------------------------------------YDWI 92 (199)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECccCCC-----------------------------------------------CCCC
Confidence 12344455555553 47999999999990 1123
Q ss_pred cHHHHHHHHHHHhccc--CCCCCEEEEEcCCCcccCCCC---------CCch---hHHHHHHHHH-HHHHcCCcEEEEcc
Q 008826 344 SGHQYKWLEKDLANVD--RSVTPWLVATWHPPWYSSYSS---------HYRE---AECMRVEMEA-LLYSYGVDIVFNGH 408 (552)
Q Consensus 344 ~~~Q~~WL~~~L~~~~--r~~~~w~Iv~~H~P~y~s~~~---------~~~~---~~~~r~~l~~-ll~~~~VdlvlsGH 408 (552)
...|++||+++|++.. +....+.++++|+|+...... ...+ .......+.. +.+..+|+++|+||
T Consensus 93 ~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH 172 (199)
T cd07383 93 RPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGH 172 (199)
T ss_pred CHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCC
Confidence 5799999999999863 223456899999987653211 1111 0011233444 44566899999999
Q ss_pred ccCceeee
Q 008826 409 VHAYERSN 416 (552)
Q Consensus 409 ~H~yeR~~ 416 (552)
+|.++...
T Consensus 173 ~H~~~~~~ 180 (199)
T cd07383 173 DHGNDFCG 180 (199)
T ss_pred CCCcceec
Confidence 99987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-15 Score=149.73 Aligned_cols=176 Identities=18% Similarity=0.215 Sum_probs=107.6
Q ss_pred EEEEEeCCCCCCCh-------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 200 RIAIVGDLGLTYNT-------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 200 rfavigD~~~~~~~-------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
||++++|+|...+. ...++.+.+.++|+|+++||++.. . .+...+.+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~------~--------------------~~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND------F--------------------QRSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc------h--------------------hhHHHHHH
Confidence 58999999975322 235566667889999999999931 0 11112333
Q ss_pred HHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCC----------
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD---------- 342 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~---------- 342 (552)
.+..+ ..+|++.++||||+.... .+..+.+.+. .....+.++.+..++++|+.++...++.
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~---~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~ 125 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDL---TYEEIESNDS-----PLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEI 125 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCC---CHHHHHhccc-----hhhhcccccccCCCceEEEeeccceecccccccCHHHH
Confidence 33332 468999999999985221 1222222110 0012233444445778888888533220
Q ss_pred ---------------------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCC------CCCchhH--HHHHHHH
Q 008826 343 ---------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS------SHYREAE--CMRVEME 393 (552)
Q Consensus 343 ---------------------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~------~~~~~~~--~~r~~l~ 393 (552)
...+|++||++.|++... .+ +|+++|+|+..... ..+.... .....|+
T Consensus 126 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~~-~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~ 202 (239)
T TIGR03729 126 LRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDN--KQ-VIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFG 202 (239)
T ss_pred HHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCC--CC-EEEEEcccchHHHhcCCCCCcchhhhhhccChHHHH
Confidence 136789999999988642 23 67777777644211 1121111 1146899
Q ss_pred HHHHHcCCcEEEEccccCce
Q 008826 394 ALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 394 ~ll~~~~VdlvlsGH~H~ye 413 (552)
+++++++|+++|+||+|.-.
T Consensus 203 ~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 203 QLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHhCCCEEEECCccCCC
Confidence 99999999999999999764
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.6e-15 Score=139.89 Aligned_cols=167 Identities=18% Similarity=0.193 Sum_probs=102.0
Q ss_pred EEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhc
Q 008826 201 IAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSK 280 (552)
Q Consensus 201 favigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~ 280 (552)
|+++||+|........ ..+.+.++|+||++||+++. +.. .....+ +.++. .+
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~~------------------~~~~~~-~~l~~--~~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GGK------------------EAAVEI-NLLLA--IG 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CCH------------------HHHHHH-HHHHh--cC
Confidence 5789999986533222 34556789999999999942 220 111112 33433 37
Q ss_pred CCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc------CCCcHHHHHHHHHH
Q 008826 281 VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS------YDKSGHQYKWLEKD 354 (552)
Q Consensus 281 iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~------~~~~~~Q~~WL~~~ 354 (552)
+|+++++||||.... ......... ... -..+.+++++|+.+++... .....+|++|+ +.
T Consensus 53 ~p~~~v~GNHD~~~~-----~~~~~~~~~-------~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~ 117 (188)
T cd07392 53 VPVLAVPGNCDTPEI-----LGLLTSAGL-------NLH--GKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GR 117 (188)
T ss_pred CCEEEEcCCCCCHHH-----HHhhhcCcE-------ecC--CCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hh
Confidence 899999999997421 111100000 011 1345678899999987421 13367899998 45
Q ss_pred HhcccCCCCCEEEEEcCCCcccC-CCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 355 LANVDRSVTPWLVATWHPPWYSS-YSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 355 L~~~~r~~~~w~Iv~~H~P~y~s-~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
|+.. ..+.+|+++|+|++.. ............+.+.+++++++++++|+||+|.-.
T Consensus 118 l~~~---~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 118 LNNL---LAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hhcc---CCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 5442 2234788888888763 111111111224688899999999999999999754
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.7e-15 Score=155.58 Aligned_cols=94 Identities=24% Similarity=0.348 Sum_probs=71.5
Q ss_pred CcceEEEE-cCeEEEEEeccccc-----CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCc-----hhHH
Q 008826 319 SSFYYSFN-AGGIHFIMLGAYIS-----YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR-----EAEC 387 (552)
Q Consensus 319 ~~~yYsf~-~G~v~fI~Ldt~~~-----~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~-----~~~~ 387 (552)
+..||+|+ .++++||+||+... .....+|++||+++|++. ..+++||++|||++.......+ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 89999999999643 234799999999999974 3356899999998765321111 1112
Q ss_pred HHHHHHHHHHHc-CCcEEEEccccCceee
Q 008826 388 MRVEMEALLYSY-GVDIVFNGHVHAYERS 415 (552)
Q Consensus 388 ~r~~l~~ll~~~-~VdlvlsGH~H~yeR~ 415 (552)
..++|.++|++| +|.++|+||+|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 346899999999 7999999999976544
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.3e-14 Score=144.47 Aligned_cols=179 Identities=26% Similarity=0.355 Sum_probs=119.2
Q ss_pred eEEEEEeCCCCC--CC-h----HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHH
Q 008826 199 KRIAIVGDLGLT--YN-T----TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (552)
Q Consensus 199 ~rfavigD~~~~--~~-~----~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~ 271 (552)
+||++++|+|.. .. . .++++++...+||+||++||+++. |. ....+...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 489999999988 22 2 234566666889999999999952 32 23445566
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEc-CeEEEEEeccccc----CCCcHH
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNA-GGIHFIMLGAYIS----YDKSGH 346 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~-G~v~fI~Ldt~~~----~~~~~~ 346 (552)
++++.+....|++++|||||..... ...+...+.... ..+..... ++++++.+|+... ...+..
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~ 125 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVVN----GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAE 125 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCchH----HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHH
Confidence 6777556688999999999986432 222322221110 11111122 6789999999643 235799
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccCc
Q 008826 347 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAY 412 (552)
Q Consensus 347 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~y 412 (552)
|++||++.|++........+|+++|+|..................+..++..++ |+++|+||.|..
T Consensus 126 q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 126 QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999999999986533112468888888776443332222233456777888888 999999999976
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.9e-14 Score=126.92 Aligned_cols=132 Identities=27% Similarity=0.386 Sum_probs=91.4
Q ss_pred EEEEeCCCCCCChH-----------HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHH
Q 008826 201 IAIVGDLGLTYNTT-----------CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 269 (552)
Q Consensus 201 favigD~~~~~~~~-----------~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~ 269 (552)
|++++|+|.+.... ..++.+.+.++|+|+++||+++. +. +.+|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999875321 13445556799999999999963 22 245667
Q ss_pred HHHHHHHhhhc-CCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHH
Q 008826 270 WGRFMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 348 (552)
Q Consensus 270 ~~~~l~~l~~~-iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~ 348 (552)
+.++++.+... +|++.++||||.
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD~-------------------------------------------------------- 80 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHDV-------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCeE--------------------------------------------------------
Confidence 77888887543 699999999996
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCc
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGP 428 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~ 428 (552)
|+++|+|++.......... ..++.+.+++++++++++++||+|......-. ...+++
T Consensus 81 ------------------iv~~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~~ 137 (144)
T cd07400 81 ------------------IVVLHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGGL 137 (144)
T ss_pred ------------------EEEecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCCE
Confidence 6777777765432211111 14567999999999999999999986554211 124567
Q ss_pred EEEEECC
Q 008826 429 VHITIGD 435 (552)
Q Consensus 429 vyiv~G~ 435 (552)
+++..|+
T Consensus 138 ~~~~aGs 144 (144)
T cd07400 138 VVIGAGT 144 (144)
T ss_pred EEEecCC
Confidence 7776664
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-14 Score=112.55 Aligned_cols=43 Identities=40% Similarity=0.686 Sum_probs=32.3
Q ss_pred CCCCCccceeeCCceEEEEEEecCCcEEEEEEEecCCCceeeEEE
Q 008826 484 DRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQI 528 (552)
Q Consensus 484 ~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~ 528 (552)
.++|+|+++|..+|||++|+|.|+|||+|+|+++.|+ +|+|+|
T Consensus 20 ~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g--~v~D~f 62 (62)
T PF14008_consen 20 YPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDG--SVLDEF 62 (62)
T ss_dssp SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS---T-CEE-
T ss_pred CCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCC--cEecCC
Confidence 4679999999999999999999999999999999887 899997
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=135.13 Aligned_cols=187 Identities=20% Similarity=0.202 Sum_probs=114.1
Q ss_pred ceEEEEEeCCCCCCC-----hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 198 ~~rfavigD~~~~~~-----~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
++||++++|+|.... ..+.++.+.+.+||+|+++||+++.. .. .. +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~------~~------------------~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGS------VD------------------VL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCc------ch------------------hh-HHHHH
Confidence 479999999998753 24556666778999999999999531 10 01 34556
Q ss_pred HHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHH
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 352 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~ 352 (552)
.++.+....|+++++||||+...... .+........+. ...+.+..++.++..+.++.-.. .....+++.
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~-~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~ 125 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEE-NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLE 125 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchH-HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHH
Confidence 66777677999999999998643211 101121111111 12334555666665554443111 122334566
Q ss_pred HHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc----------
Q 008826 353 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT---------- 422 (552)
Q Consensus 353 ~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~---------- 422 (552)
+.+++.+ ...+.|++.|.|.+.. .+.+.++|++++||+|..+...|.....
T Consensus 126 ~~~~~~~--~~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~ 186 (223)
T cd07385 126 KALKGLD--EDDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYD 186 (223)
T ss_pred HHHhCCC--CCCCEEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCccc
Confidence 7776653 3346899999885321 1156799999999999998776543210
Q ss_pred ----cCCCCcEEEEECCCCC
Q 008826 423 ----LDPCGPVHITIGDGGN 438 (552)
Q Consensus 423 ----~~~~G~vyiv~G~gG~ 438 (552)
...+..+||+.|.|..
T Consensus 187 ~G~~~~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 187 YGLYRKGGSQLYVSRGLGTW 206 (223)
T ss_pred ceEEEECCEEEEEcCCccCC
Confidence 1133467777777664
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=128.88 Aligned_cols=144 Identities=20% Similarity=0.287 Sum_probs=87.3
Q ss_pred EEEEeCCCCCCChHHHH--HHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhh
Q 008826 201 IAIVGDLGLTYNTTCTI--NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (552)
Q Consensus 201 favigD~~~~~~~~~~l--~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 278 (552)
|+++||+|.+....... +.+.+.++|+++++||+++. +. ...+.. ......
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~------~~------------------~~~~~~---~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYL------TD------------------APRFAP---LLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCC------cc------------------hHHHHH---HHHhhc
Confidence 57899999875433222 23445789999999999952 11 011211 233344
Q ss_pred hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCC-cHHHHHHHHHHHhc
Q 008826 279 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK-SGHQYKWLEKDLAN 357 (552)
Q Consensus 279 ~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~-~~~Q~~WL~~~L~~ 357 (552)
...|+++++||||+. +.|+...-..++.. ..++.+|+.++++
T Consensus 54 ~~~~v~~v~GNHD~~------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~- 96 (166)
T cd07404 54 GFEPVIYVPGNHEFY------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR- 96 (166)
T ss_pred CCccEEEeCCCcceE------------------------------------EEEEeeecccccCccchHHHHhCCCCCC-
Confidence 678999999999984 22222221112211 2345566655554
Q ss_pred ccCCCCCEEEEEcCCCcccCCCCCC---c-hhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 008826 358 VDRSVTPWLVATWHPPWYSSYSSHY---R-EAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (552)
Q Consensus 358 ~~r~~~~w~Iv~~H~P~y~s~~~~~---~-~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 414 (552)
+.+||++|+|+........ . .....++.+..++++++|+++++||+|....
T Consensus 97 ------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 97 ------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred ------CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 2367888888766532211 1 1123456677888899999999999997643
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.3e-13 Score=133.38 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=98.2
Q ss_pred ceEEEEEeCCCCCCC-----hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 198 ~~rfavigD~~~~~~-----~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
++||+++||+|.... ..+.++.+.+.+||+|+++||+++.+ . ...++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~------~------------------~~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFD------M------------------PLNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCC------c------------------cccHHHHHH
Confidence 699999999998632 23455666678999999999998421 1 012345667
Q ss_pred HHHHhhhcCCeEEecCCchhccccc-CcchHHhhhhcCCCCCCCCCCCcceEEEEcCe--EEEEEecccccCCCcHHHHH
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEESGSLSSFYYSFNAGG--IHFIMLGAYISYDKSGHQYK 349 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~--v~fI~Ldt~~~~~~~~~Q~~ 349 (552)
.++.+.+..|+++|+||||+..... ...+....+.-.+ .-..+....+..++ +.++.+|........
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~~~~~----- 174 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWAGQCK----- 174 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhccCCC-----
Confidence 7777777789999999999853211 1112222111111 11234455555553 556666532111100
Q ss_pred HHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeec
Q 008826 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 418 (552)
Q Consensus 350 WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv 418 (552)
..+.+++ + ...|++.|.|-+- +.+.+.++|++||||+|.-|...|.
T Consensus 175 -~~~~~~~----~-~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 175 -PPPASEA----N-LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred -hhHhcCC----C-CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 1112222 2 2478899999431 1234578999999999998887664
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.9e-12 Score=125.42 Aligned_cols=169 Identities=14% Similarity=0.197 Sum_probs=102.8
Q ss_pred ceEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+.||+++||+|..... .+.++.+.+.++|+|+++||+++. |. ..+.+.++++.
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~--------------------~~~~~~~~l~~ 57 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AA--------------------KSEDYAAFFRI 57 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CC--------------------CHHHHHHHHHH
Confidence 6799999999975332 334444445789999999999952 21 01223344444
Q ss_pred hh-hcCCeEEecCCchhcccccCcchHHhhhhcC----CCCCCCCCCCcceEEEEc-CeEEEEEecccccC--CCcHHHH
Q 008826 277 LV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEESGSLSSFYYSFNA-GGIHFIMLGAYISY--DKSGHQY 348 (552)
Q Consensus 277 l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~~~~~~~~yYsf~~-G~v~fI~Ldt~~~~--~~~~~Q~ 348 (552)
+. ..+|+++++||||... .....+.|. .|.. ......+ ..+ |+++|+.|+....+ ..+++|.
T Consensus 58 l~~l~~pv~~V~GNhD~~v------~~~l~~~~~~~~~~p~~--~~lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~ 127 (224)
T cd07388 58 LGEAHLPTFYVPGPQDAPL------WEYLREAYNAELVHPEI--RNVHETF--AFWRGPYLVAGVGGEIADEGEPEEHEA 127 (224)
T ss_pred HHhcCCceEEEcCCCChHH------HHHHHHHhcccccCccc--eecCCCe--EEecCCeEEEEecCCcCCCCCcCHHHH
Confidence 42 2589999999999631 111111221 1210 0011122 334 56999999975433 2355552
Q ss_pred ----HHHHH----HHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEcccc
Q 008826 349 ----KWLEK----DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410 (552)
Q Consensus 349 ----~WL~~----~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 410 (552)
+||.+ .|.+. ..+..|+++|.|++.....|.. ...+..++++++..+++|||+|
T Consensus 128 ~~~~~~~~~~~l~~~~~~---~~~~~VLv~H~PP~g~g~~h~G-----S~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 128 LRYPAWVAEYRLKALWEL---KDYRKVFLFHTPPYHKGLNEQG-----SHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhhhhhHHHHHHHHHHhC---CCCCeEEEECCCCCCCCCCccC-----HHHHHHHHHHhCCCEEEEcCCc
Confidence 56433 33332 2335899999999987433322 3577889999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.4e-13 Score=129.81 Aligned_cols=185 Identities=16% Similarity=0.157 Sum_probs=106.6
Q ss_pred EEEEEeCCCCCCC----------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 200 RIAIVGDLGLTYN----------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 200 rfavigD~~~~~~----------------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
||++++|+|++.. ..++++.+.+.+||+|+++||+++... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 6899999998743 133445555679999999999985321 00
Q ss_pred HHHHHHHHHHHHHhh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCC--CCCCCCcceEEEEcCeEEEEEeccccc
Q 008826 264 QPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE--ESGSLSSFYYSFNAGGIHFIMLGAYIS 340 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~--~~~~~~~~yYsf~~G~v~fI~Ldt~~~ 340 (552)
...+..+.+.++.+. ..+|+++++||||....... ............. ...........++.+++.|+.++....
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~ 136 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR 136 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccccc--ccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH
Confidence 134556667777664 58999999999998743221 1111111000000 000011223334455688888875422
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 341 YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 341 ~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
. ....+.+++++.+.+.. .....|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 137 ~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 137 S-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred H-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 1 12344455555555543 34468999999976543221110 123334456779999999999987543
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-11 Score=122.65 Aligned_cols=256 Identities=22% Similarity=0.280 Sum_probs=142.9
Q ss_pred CceEEEEEeCCCCCCC--------------------hHHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCC
Q 008826 197 YPKRIAIVGDLGLTYN--------------------TTCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255 (552)
Q Consensus 197 ~~~rfavigD~~~~~~--------------------~~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~ 255 (552)
.+|||+.++|+|.+.. ....+++++ .++||||+++||+++... .
T Consensus 52 g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~-----t---------- 116 (379)
T KOG1432|consen 52 GTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS-----T---------- 116 (379)
T ss_pred CceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc-----c----------
Confidence 3799999999998642 234566665 479999999999996421 0
Q ss_pred CCccccccHHHHHHHHHHHHHh-hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC--CC-CCcceEEEEcCe--
Q 008826 256 KTPIHETYQPRWDYWGRFMQNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES--GS-LSSFYYSFNAGG-- 329 (552)
Q Consensus 256 ~~~~~e~y~~~wd~~~~~l~~l-~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~--~~-~~~~yYsf~~G~-- 329 (552)
+..-..+++.++|. ..+|||.++.||||-+..........+... +|..-+ .. .+..+--..+|+
T Consensus 117 --------~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn 186 (379)
T KOG1432|consen 117 --------QDAATSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYN 186 (379)
T ss_pred --------HhHHHHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhc--CCCccccCCCcccceeeeecccceE
Confidence 11113455666665 689999999999998755433333333222 222110 00 011110111121
Q ss_pred ----------------EEEEEeccccc---------C-CCcHHHHHHHHHHHhc---ccCCCCC-EEEEEcCCCcc--cC
Q 008826 330 ----------------IHFIMLGAYIS---------Y-DKSGHQYKWLEKDLAN---VDRSVTP-WLVATWHPPWY--SS 377 (552)
Q Consensus 330 ----------------v~fI~Ldt~~~---------~-~~~~~Q~~WL~~~L~~---~~r~~~~-w~Iv~~H~P~y--~s 377 (552)
..+++||+..+ | .....|.+||+..-++ .+..-.| --++++|.|+- ..
T Consensus 187 ~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~ 266 (379)
T KOG1432|consen 187 LQIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLE 266 (379)
T ss_pred EEeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhh
Confidence 23455555321 1 1257899999987733 1112223 36788899873 21
Q ss_pred CCC------CCchh---HHHHHHHHHHHH-HcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccC
Q 008826 378 YSS------HYREA---ECMRVEMEALLY-SYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHA 447 (552)
Q Consensus 378 ~~~------~~~~~---~~~r~~l~~ll~-~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~ 447 (552)
... ..++. ......+...|. ..+|+.|++||.|.-.-..+. .|.+++.=|+|+..-+..
T Consensus 267 ~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~-------k~~~wlCygGgaGyggYg---- 335 (379)
T KOG1432|consen 267 LESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGEL-------KGELWLCYGGGAGYGGYG---- 335 (379)
T ss_pred ccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceeccc-------CCeEEEEecCCCccCCcC----
Confidence 111 11111 111235556666 779999999999986655432 344666555544321110
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEe-cCCcEEEEEEEecCCCceeeE
Q 008826 448 DEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVK-NETWALWTWHRNQDSNNKVGD 526 (552)
Q Consensus 448 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~-n~t~~~~~~~~~~d~~~~v~D 526 (552)
++-| .| +--++++. ++..+ -+|.|.+|...++.|
T Consensus 336 --------------------------------------~~gw--~R----r~Rv~e~d~~~~~I-kTWKRl~d~~~~~~D 370 (379)
T KOG1432|consen 336 --------------------------------------IGGW--ER----RARVFELDLNKDRI-KTWKRLDDKPLSVID 370 (379)
T ss_pred --------------------------------------cCCc--cc----ceEEEEcccccccc-ceeeecCCCCcceee
Confidence 0111 11 23455554 44444 489999999888889
Q ss_pred EEEEEeC
Q 008826 527 QIYIVRQ 533 (552)
Q Consensus 527 ~~~i~k~ 533 (552)
.-.+.+.
T Consensus 371 ~q~l~d~ 377 (379)
T KOG1432|consen 371 YQLLYDG 377 (379)
T ss_pred eEEEecc
Confidence 8877654
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.5e-12 Score=133.02 Aligned_cols=93 Identities=19% Similarity=0.261 Sum_probs=67.2
Q ss_pred CcceEEEE-cCeE--EEEEeccccc-----------CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCC---
Q 008826 319 SSFYYSFN-AGGI--HFIMLGAYIS-----------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH--- 381 (552)
Q Consensus 319 ~~~yYsf~-~G~v--~fI~Ldt~~~-----------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~--- 381 (552)
+..||+|+ .|++ |+|+||+... .....+|++||+++|+.... +.+++|+++|+|+.+.....
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 34599999 5855 9999998631 12468999999999998753 45789999999987622111
Q ss_pred Cc----------hhHHHHHHHHHHHHHc-CCcEEEEccccCc
Q 008826 382 YR----------EAECMRVEMEALLYSY-GVDIVFNGHVHAY 412 (552)
Q Consensus 382 ~~----------~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 412 (552)
+. +......+|..+|.+| +|.++|+||.|.-
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 11 0011124899999999 6999999999963
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.3e-11 Score=107.08 Aligned_cols=116 Identities=28% Similarity=0.483 Sum_probs=82.1
Q ss_pred EEEeCCCCCCChHHHH---HHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhh
Q 008826 202 AIVGDLGLTYNTTCTI---NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (552)
Q Consensus 202 avigD~~~~~~~~~~l---~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 278 (552)
+++||+|......... ....+.++|+|+++||+++. +.. ..+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~------~~~------------------~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGD------GPD------------------PEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCC------CCC------------------chHHHHHHHHHhhc
Confidence 4789999886543332 34456799999999999963 211 12222222333446
Q ss_pred hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhcc
Q 008826 279 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 358 (552)
Q Consensus 279 ~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~ 358 (552)
...|++.++||||
T Consensus 57 ~~~~~~~~~GNHD------------------------------------------------------------------- 69 (131)
T cd00838 57 LGIPVYVVPGNHD------------------------------------------------------------------- 69 (131)
T ss_pred CCCCEEEeCCCce-------------------------------------------------------------------
Confidence 7899999999999
Q ss_pred cCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008826 359 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 416 (552)
Q Consensus 359 ~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~ 416 (552)
|++.|.|++.............+..+..++.+.+++++|+||.|.+.+..
T Consensus 70 --------i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 --------ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 88889998776433222222256788899999999999999999998874
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.2e-10 Score=114.80 Aligned_cols=178 Identities=20% Similarity=0.222 Sum_probs=113.5
Q ss_pred EEEEEeCCCCCCChHHHHHHHH----hCCCCEEEEcCCcccccccccCCCCCC--CCcCCCCCCccccccHHHHHHHH--
Q 008826 200 RIAIVGDLGLTYNTTCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSD--CYSCSFSKTPIHETYQPRWDYWG-- 271 (552)
Q Consensus 200 rfavigD~~~~~~~~~~l~~l~----~~~pDfvl~~GDl~Y~d~~~~~G~~~~--cy~~~~~~~~~~e~y~~~wd~~~-- 271 (552)
||++.||.+...........+. +.+||++|++||.+|++.......... --..........+.|+.++..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5889999887765555555554 789999999999999874311000000 00000001223345555555543
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccC----------------cchHHhhhhcCCCCCCCC--CCCcceEEEEcCeE-EE
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGN----------------QTFVAYSSRFAFPSEESG--SLSSFYYSFNAGGI-HF 332 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~----------------~~f~~y~~~f~~P~~~~~--~~~~~yYsf~~G~v-~f 332 (552)
..++.+.+++|++.++.+||+.++.+. .....|......+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 346777889999999999999876443 122345554444433322 34678999999996 99
Q ss_pred EEecccccCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCC--cEEEEcccc
Q 008826 333 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGV--DIVFNGHVH 410 (552)
Q Consensus 333 I~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~V--dlvlsGH~H 410 (552)
|+||++... ..|......|+++..++.+.++ -++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998653 3344445567788887666643 489999999
Q ss_pred Cceee
Q 008826 411 AYERS 415 (552)
Q Consensus 411 ~yeR~ 415 (552)
..+..
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 65544
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.9e-10 Score=109.64 Aligned_cols=195 Identities=21% Similarity=0.211 Sum_probs=101.4
Q ss_pred eEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhh
Q 008826 199 KRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (552)
Q Consensus 199 ~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 278 (552)
+||+++||+|..... ...+.+.+.+||+|+++||++.. . ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~-------~----------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE-------S----------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC-------h----------------------HHHHHHHHhC-
Confidence 589999999976443 33456667799999999999831 0 1223333333
Q ss_pred hcCCeEEecCCchhcccccC-cchHHhhhhcCCCCCCCCCCCcceEE---EEcCeEEEEEeccccc--------------
Q 008826 279 SKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYS---FNAGGIHFIMLGAYIS-------------- 340 (552)
Q Consensus 279 ~~iP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYs---f~~G~v~fI~Ldt~~~-------------- 340 (552)
..|++++.||||....... .....+.+....- +..... .++....+.+..++..
T Consensus 50 -~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~l-------g~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr 121 (238)
T cd07397 50 -PLPKAVILGNHDAWYDATFRKKGDRVQEQLELL-------GDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVK 121 (238)
T ss_pred -CCCeEEEcCCCcccccccccchHHHHHHHHHHh-------CCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHH
Confidence 4799999999998653211 0122233322111 111111 1222222222332210
Q ss_pred --C--CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCC-------------CchhHHHHHHHHHHHHHcCCcE
Q 008826 341 --Y--DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH-------------YREAECMRVEMEALLYSYGVDI 403 (552)
Q Consensus 341 --~--~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~-------------~~~~~~~r~~l~~ll~~~~Vdl 403 (552)
| ..-.+-.+.+-+.++..+. ..+ .|++.|.++....+.. ......+++++..+-.+-.+++
T Consensus 122 ~~fgi~s~~eA~~~ive~~~~~~~-~~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l 199 (238)
T cd07397 122 AVYGVISLEESAQRIIAAAKKAPP-DLP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPL 199 (238)
T ss_pred HHhCCCCHHHHHHHHHHHhhhcCC-CCC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCE
Confidence 1 0112223444444443332 223 6888898886653111 1123455666655543335899
Q ss_pred EEEccccCceeeee-ccc-cccCCCCcEEEEEC
Q 008826 404 VFNGHVHAYERSNR-VFN-YTLDPCGPVHITIG 434 (552)
Q Consensus 404 vlsGH~H~yeR~~p-v~n-~~~~~~G~vyiv~G 434 (552)
+++||+|.--|... ... ...+..|++|+...
T Consensus 200 ~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a 232 (238)
T cd07397 200 VVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAA 232 (238)
T ss_pred EEeCCccCcccccccccceeeecCCCeEEEecc
Confidence 99999996533211 100 11356799998543
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=104.28 Aligned_cols=117 Identities=18% Similarity=0.207 Sum_probs=74.4
Q ss_pred EEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhh
Q 008826 200 RIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 279 (552)
Q Consensus 200 rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~ 279 (552)
||+++||+|.... .+...++|+++++||++.. +. ...++.+.+.++.+.
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~~- 49 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSLP- 49 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhCC-
Confidence 5899999997744 2344689999999999842 21 123344555555542
Q ss_pred cCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhccc
Q 008826 280 KVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 359 (552)
Q Consensus 280 ~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 359 (552)
..++++++||||.... .
T Consensus 50 ~~~~~~v~GNHD~~~~--------------------------------------------------------------~- 66 (135)
T cd07379 50 HPHKIVIAGNHDLTLD--------------------------------------------------------------P- 66 (135)
T ss_pred CCeEEEEECCCCCcCC--------------------------------------------------------------C-
Confidence 1235789999996310 1
Q ss_pred CCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 360 RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 360 r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
. .+.|++.|.|++............-.+.+.+++.+++++++|+||+|...
T Consensus 67 -~--~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 -E--DTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred -C--CCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 1 23677889888765422111011112466777788999999999999764
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.6e-10 Score=104.84 Aligned_cols=138 Identities=25% Similarity=0.381 Sum_probs=80.7
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+||+++||+|..... .+.++.+ +++|+|+++||++.. .++.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 699999999986432 3455555 579999999999831 2334444433
Q ss_pred hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhc
Q 008826 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 357 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~ 357 (552)
|++++.||||... +....... + +.+.+..
T Consensus 49 ----~~~~v~GNHD~~~---------~~~~~~~~----------~----------------------------~~~~~~~ 77 (156)
T PF12850_consen 49 ----PVYVVRGNHDNWA---------FPNENDEE----------Y----------------------------LLDALRL 77 (156)
T ss_dssp ----EEEEE--CCHSTH---------HHSEECTC----------S----------------------------SHSEEEE
T ss_pred ----CEEEEeCCccccc---------chhhhhcc----------c----------------------------cccceee
Confidence 8999999999531 11111000 0 0000000
Q ss_pred ccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCC
Q 008826 358 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 358 ~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG 437 (552)
......|++.|...+.... ..+.+..++...+++++|+||+|...... .+|+.++..|+-+
T Consensus 78 ---~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~ 138 (156)
T PF12850_consen 78 ---TIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIG 138 (156)
T ss_dssp ---EETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSS
T ss_pred ---eecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCC
Confidence 1123477777876654321 12345677788999999999999877753 3578888888765
Q ss_pred C
Q 008826 438 N 438 (552)
Q Consensus 438 ~ 438 (552)
.
T Consensus 139 ~ 139 (156)
T PF12850_consen 139 G 139 (156)
T ss_dssp S
T ss_pred C
Confidence 5
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.5e-10 Score=113.30 Aligned_cols=76 Identities=21% Similarity=0.307 Sum_probs=58.0
Q ss_pred CceEEEEEeCCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHH
Q 008826 197 YPKRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (552)
Q Consensus 197 ~~~rfavigD~~~~~~~---~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~ 273 (552)
..+||++++|+|..... .+.+.++....||+|+++||+++.+ . .+.+..+.+.
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~------~------------------~~~~~~~~~~ 98 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD------R------------------PPGVAALALF 98 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC------C------------------CCCHHHHHHH
Confidence 36899999999987554 2345555567889999999999520 0 1234667888
Q ss_pred HHHhhhcCCeEEecCCchhcccc
Q 008826 274 MQNLVSKVPIMVVEGNHEIEAQA 296 (552)
Q Consensus 274 l~~l~~~iP~~~v~GNHD~~~~~ 296 (552)
+++|.+..+++++.||||+....
T Consensus 99 L~~L~~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 99 LAKLKAPLGVFAVLGNHDYGVDR 121 (284)
T ss_pred HHhhhccCCEEEEeccccccccc
Confidence 89999999999999999997543
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-09 Score=107.96 Aligned_cols=197 Identities=17% Similarity=0.207 Sum_probs=104.4
Q ss_pred eEEEEEeCCCCCCChH----HHHHHHH--hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNTT----CTINHMS--SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 199 ~rfavigD~~~~~~~~----~~l~~l~--~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
+|++++||+|++.... ..++.+. +.+||+|+++||+++. | .|... ..+......+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~--~g~~~---------------~~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--W--IGDDD---------------PSPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--c--cccCc---------------CCHHHHHHHH
Confidence 4799999999875432 2333332 3589999999999942 1 11100 0122234556
Q ss_pred HHHHhhhc-CCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHH
Q 008826 273 FMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 351 (552)
Q Consensus 273 ~l~~l~~~-iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL 351 (552)
.++.+... +|++.++||||.... ..+.+...+.. . .....+++++.++++.-.-.. ......++++
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~~~------~~~~~~~g~~~-----l-~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~ 128 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFLLG------KRFAKAAGMTL-----L-PDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRF 128 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchhhh------HHHHHhCCCEE-----e-CCcEEEEECCEEEEEECCccc-ccCCHHHHHH
Confidence 66666544 899999999997421 12222221110 1 123346777877777654321 1233455555
Q ss_pred HHHHhcccCCCCCEEEEEcCCCcccCCCC-------------C--Cc-hhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 352 EKDLANVDRSVTPWLVATWHPPWYSSYSS-------------H--YR-EAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 352 ~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~-------------~--~~-~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
++.+.+. |....+|.+++..... . .. -.....+.+.+++.+++++++++||+|.-...
T Consensus 129 r~~~r~~------~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 202 (241)
T PRK05340 129 RRKVRNP------WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIH 202 (241)
T ss_pred HHHHhCH------HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCccee
Confidence 5554431 1222222222211000 0 00 00001246778889999999999999976543
Q ss_pred eeccccccCCCCcEEEEECCCC
Q 008826 416 NRVFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 416 ~pv~n~~~~~~G~vyiv~G~gG 437 (552)
. +.+ +..+..|++.|+..
T Consensus 203 ~-~~~---~~~~~~~~~lgdw~ 220 (241)
T PRK05340 203 Q-LQA---GGQPATRIVLGDWH 220 (241)
T ss_pred e-ccC---CCcceEEEEeCCCC
Confidence 2 111 11124688888874
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.2e-09 Score=99.85 Aligned_cols=110 Identities=17% Similarity=0.346 Sum_probs=70.1
Q ss_pred HHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh---hhcCCeEEecCCchhcccc
Q 008826 220 MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL---VSKVPIMVVEGNHEIEAQA 296 (552)
Q Consensus 220 l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l---~~~iP~~~v~GNHD~~~~~ 296 (552)
+...+||+|+++||+++. |... -..+|.+..+.+.++ ...+|++.++||||++...
T Consensus 38 ~~~l~PD~Vi~lGDL~D~------G~~~---------------~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~ 96 (195)
T cd08166 38 LNFVQPDIVIFLGDLMDE------GSIA---------------NDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEE 96 (195)
T ss_pred HhccCCCEEEEeccccCC------CCCC---------------CHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCC
Confidence 334689999999999953 3311 023344433333333 3568999999999997432
Q ss_pred cCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCccc
Q 008826 297 GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYS 376 (552)
Q Consensus 297 ~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~ 376 (552)
.... ..-.+||. .+| |++.|.|...
T Consensus 97 ~~~~-~~~v~RF~-----------~~F-------------------------------------------i~lsH~P~~~ 121 (195)
T cd08166 97 EDPI-ESKIRRFE-----------KYF-------------------------------------------IMLSHVPLLA 121 (195)
T ss_pred CCcC-HHHHHHHH-----------Hhh-------------------------------------------eeeecccccc
Confidence 2111 22223331 011 8899999865
Q ss_pred CCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 377 SYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 377 s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
... ..+..++.+++++++|+||.|.+.+.
T Consensus 122 ~~~----------~~~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 122 EGG----------QALKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred ccc----------HHHHHHHHhcCceEEEEcCccceeeE
Confidence 321 25677888999999999999987665
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.8e-08 Score=108.49 Aligned_cols=180 Identities=18% Similarity=0.288 Sum_probs=108.1
Q ss_pred HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCch
Q 008826 214 TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHE 291 (552)
Q Consensus 214 ~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD 291 (552)
.+++++|.++ ++|+|+++||++-.+.|. ...+..-.......+.|.+....+|++++.||||
T Consensus 198 es~L~~ike~~~~iD~I~wTGD~~~H~~w~----------------~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe 261 (577)
T KOG3770|consen 198 ESALDHIKENHKDIDYIIWTGDNVAHDVWA----------------QTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHE 261 (577)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCcccchh----------------hhHHHHHHHHHHHHHHHHHhCCCCceeeecccCC
Confidence 3467777754 489999999999544221 1111111222334455667778999999999999
Q ss_pred hccccc-------Cc-----chHHhhhhc--CCCCCC-CCCCCcceEEE-EcCeEEEEEecccccC----------CCcH
Q 008826 292 IEAQAG-------NQ-----TFVAYSSRF--AFPSEE-SGSLSSFYYSF-NAGGIHFIMLGAYISY----------DKSG 345 (552)
Q Consensus 292 ~~~~~~-------~~-----~f~~y~~~f--~~P~~~-~~~~~~~yYsf-~~G~v~fI~Ldt~~~~----------~~~~ 345 (552)
...... .. .|..+...| -+|.+. .....+.+|.- -.+|.++|+||+..-+ ....
T Consensus 262 ~~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~ 341 (577)
T KOG3770|consen 262 IHPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPI 341 (577)
T ss_pred CCcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCch
Confidence 874311 01 112222222 133321 12334556654 4689999999985322 2367
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccCceee
Q 008826 346 HQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAYERS 415 (552)
Q Consensus 346 ~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~yeR~ 415 (552)
.|++|+..+|..++.++.+ |=++.|.|.-.. ... +.....+-.++.++. +...|.||.|.-+-.
T Consensus 342 ~~lqWf~~~L~~ae~~Gek-Vhil~HIPpG~~---~c~--~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 342 DQLQWFVDQLQEAESAGEK-VHILGHIPPGDG---VCL--EGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HHhhHHHHHHHHHHhcCCE-EEEEEeeCCCCc---chh--hhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 8899999999998654433 667889997542 111 122334556666663 566899999976543
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=8e-09 Score=95.39 Aligned_cols=56 Identities=20% Similarity=0.147 Sum_probs=37.2
Q ss_pred EEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
+|++.|.+....... . + . ..++.+.++|++++||+|...... .++++++..|+.|.
T Consensus 77 ~i~v~Hg~~~~~~~~----~---~-~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 132 (155)
T cd00841 77 RIFLTHGHLYGVKNG----L---D-R-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSL 132 (155)
T ss_pred EEEEECCcccccccc----h---h-h-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccC
Confidence 677778776543211 0 1 1 455677899999999999764432 24788888888765
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.3e-09 Score=96.65 Aligned_cols=52 Identities=29% Similarity=0.547 Sum_probs=33.8
Q ss_pred HhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh-h--hcCCeEEecCCchhc
Q 008826 221 SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL-V--SKVPIMVVEGNHEIE 293 (552)
Q Consensus 221 ~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l-~--~~iP~~~v~GNHD~~ 293 (552)
.+.+||+|+++||++.. +.. .. ...|..+...+..+ . ..+|++.++||||..
T Consensus 35 ~~~~pd~vv~~GDl~~~------~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 35 WLLQPDVVFVLGDLFDE------GKW--------------ST-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HhcCCCEEEECCCCCCC------Ccc--------------CC-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 35789999999999953 110 00 13455544433333 2 258999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.6e-08 Score=92.49 Aligned_cols=61 Identities=21% Similarity=0.347 Sum_probs=41.9
Q ss_pred eEEEEEeCCCCCCChHH-HHHHHHhC-CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNTTC-TINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 199 ~rfavigD~~~~~~~~~-~l~~l~~~-~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+||+++||+|......+ .++.+... ++|.|+++||++.. ...+.++.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~-------------------------------~~~~~l~~ 49 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTSP-------------------------------FVLKEFED 49 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCCH-------------------------------HHHHHHHH
Confidence 58999999997654333 33444455 89999999999710 12233333
Q ss_pred hhhcCCeEEecCCchh
Q 008826 277 LVSKVPIMVVEGNHEI 292 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~ 292 (552)
+ ..|++.|.||||.
T Consensus 50 ~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 50 L--AAKVIAVRGNNDG 63 (158)
T ss_pred h--CCceEEEccCCCc
Confidence 2 4589999999996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.8e-07 Score=87.51 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=29.6
Q ss_pred HHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 391 ~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
.+..++++.++|++++||+|...... .+|.+++..|+.|.
T Consensus 97 ~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~ 136 (178)
T cd07394 97 SLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATG 136 (178)
T ss_pred HHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCC
Confidence 34455667889999999999754432 24788898898774
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.5e-08 Score=91.01 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=31.3
Q ss_pred EEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
.|+++|+|++...... .......+.+.+++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 4667777766432211 000112457778888999999999999965443
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.7e-08 Score=92.91 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=25.8
Q ss_pred EEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008826 367 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 416 (552)
Q Consensus 367 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~ 416 (552)
|++.|.|.+. ++.+.+++++|+||+|.+-+..
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~~~~~ 150 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQCEVV 150 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCCeEEE
Confidence 8899998631 5677899999999999986654
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.3e-08 Score=93.87 Aligned_cols=194 Identities=22% Similarity=0.318 Sum_probs=88.9
Q ss_pred ceEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCc-----CCCCC-Ccccc--ccHH-HH
Q 008826 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS-----CSFSK-TPIHE--TYQP-RW 267 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~-----~~~~~-~~~~e--~y~~-~w 267 (552)
+-|++.++|.+..... .+.+..+.+.+||+|+++||+.-. ....+.|. ...|+ ..+.+ .|+. ..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~------~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKA------EARSDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-T------CHHHHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEecccccc------chhhhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 4589999999865332 344555556799999999999832 11110010 00000 00000 0000 01
Q ss_pred HHHHHHHHHhhhcCCeEEecCCchhcccccCcch-HHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC-CC--
Q 008826 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTF-VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-DK-- 343 (552)
Q Consensus 268 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f-~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~-~~-- 343 (552)
+.+++.+.. ..+|++++|||||.... ..+ .+|....-.|.-- .-...+.+.-|..-|+.+..+... ..
T Consensus 79 ~~ff~~L~~--~~~p~~~vPG~~Dap~~---~~lr~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~~~ 150 (255)
T PF14582_consen 79 DKFFRILGE--LGVPVFVVPGNMDAPER---FFLREAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQREE 150 (255)
T ss_dssp HHHHHHHHC--C-SEEEEE--TTS-SHH---HHHHHHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-BC
T ss_pred HHHHHHHHh--cCCcEEEecCCCCchHH---HHHHHHhccceecccee---eeeeeecccCCcEEEEecCccccCCCccc
Confidence 133333433 58999999999998421 011 1222111122100 001123344455888888765321 11
Q ss_pred ------cHHHHHHHHHHHhcccCCCCCEEEEEcCCCc-ccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 344 ------SGHQYKWLEKDLANVDRSVTPWLVATWHPPW-YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 344 ------~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~-y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
.....+|..+.|..++ ..-+|+.+|.|+ +.....+.. .+++.+++++|+.++||+||+|--.
T Consensus 151 ~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 151 EFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp SSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred cccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEecccccch
Confidence 2234455566666653 223788899998 443322322 2578899999999999999999643
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.82 E-value=1e-07 Score=94.26 Aligned_cols=73 Identities=15% Similarity=0.312 Sum_probs=47.2
Q ss_pred EEEeCCCCCCCh----HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 202 AIVGDLGLTYNT----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 202 avigD~~~~~~~----~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
+++||+|.+... ...++.+.+ .+||+|+++||+++ .|. |... . ....+.+.+.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d--~~~--~~~~------------~---~~~~~~~~~~l~ 62 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFE--AWI--GDDD------------P---STLARSVAQAIR 62 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceec--ccc--CCCC------------C---CHHHHHHHHHHH
Confidence 689999987532 234555544 37999999999994 221 1100 0 112234556666
Q ss_pred Hhhh-cCCeEEecCCchhc
Q 008826 276 NLVS-KVPIMVVEGNHEIE 293 (552)
Q Consensus 276 ~l~~-~iP~~~v~GNHD~~ 293 (552)
.+.. .+|+++++||||..
T Consensus 63 ~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 63 QVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred HHHHCCCeEEEEcCCCchh
Confidence 6654 58999999999985
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-07 Score=90.32 Aligned_cols=191 Identities=18% Similarity=0.247 Sum_probs=112.8
Q ss_pred ceEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 198 ~~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
.+|+++++|+|.... ..+.++.+...++|+++.+||++|.+ .|... ..-+.. + ++.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~~-------------~~~~~~---~---~e~ 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPKE-------------VAEELN---K---LEA 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCchH-------------HHHhhh---H---HHH
Confidence 589999999998754 34455555567999999999999542 22210 000000 1 344
Q ss_pred hh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccc------cCCCcHHH-H
Q 008826 277 LV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI------SYDKSGHQ-Y 348 (552)
Q Consensus 277 l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~------~~~~~~~Q-~ 348 (552)
+. ..+|+++++||-|... ......+ ....- .+ -+.+.+++.|+.+.... .+..++++ +
T Consensus 60 l~~~~~~v~avpGNcD~~~-----v~~~l~~-~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 60 LKELGIPVLAVPGNCDPPE-----VIDVLKN-AGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred HHhcCCeEEEEcCCCChHH-----HHHHHHh-ccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 43 6899999999987631 1111111 11111 11 56778888888865321 11223333 4
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCC
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G 427 (552)
.-|++-+++.+... .|+.+|.|+|......... ...-...+.+++++.++-+.++||+|-+.-.-. -+.
T Consensus 126 s~l~~~v~~~~~~~---~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-------iG~ 195 (226)
T COG2129 126 SKLKSLVKKADNPV---NILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-------IGN 195 (226)
T ss_pred HHHHHHHhcccCcc---eEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccccccc-------cCC
Confidence 45555555543221 3899999999875442222 122346788899999999999999997433311 234
Q ss_pred cEEEEECC
Q 008826 428 PVHITIGD 435 (552)
Q Consensus 428 ~vyiv~G~ 435 (552)
++.|.-|.
T Consensus 196 TivVNPG~ 203 (226)
T COG2129 196 TIVVNPGP 203 (226)
T ss_pred eEEECCCC
Confidence 66665555
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.3e-07 Score=94.54 Aligned_cols=192 Identities=16% Similarity=0.138 Sum_probs=98.8
Q ss_pred eEEEEEeCCCCCC-------Ch---HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHH
Q 008826 199 KRIAIVGDLGLTY-------NT---TCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 267 (552)
Q Consensus 199 ~rfavigD~~~~~-------~~---~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~w 267 (552)
++|++++|+|... +. ...++++.+.+|| +++.+||++....... + ...
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~--------------------~-~~~ 59 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST--------------------A-TKG 59 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh--------------------c-cCC
Confidence 4899999999553 12 3466777777788 7899999985321100 0 001
Q ss_pred HHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCC---C----C---CCCCCcceEEEEcCeEEEEE--e
Q 008826 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPS---E----E---SGSLSSFYYSFNAGGIHFIM--L 335 (552)
Q Consensus 268 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~---~----~---~~~~~~~yYsf~~G~v~fI~--L 335 (552)
....+.++.+ -.-++++||||+... ...+.........|. + + .......|..++.+++++-+ +
T Consensus 60 ~~~~~~l~~~---g~d~~~~GNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~ 134 (252)
T cd00845 60 EANIELMNAL---GYDAVTIGNHEFDYG--LDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGL 134 (252)
T ss_pred cHHHHHHHhc---CCCEEeecccccccc--HHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEe
Confidence 1223333332 245577899998632 223333333333321 0 0 00112345567788765544 4
Q ss_pred cccccCC----------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEE
Q 008826 336 GAYISYD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 405 (552)
Q Consensus 336 dt~~~~~----------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdlvl 405 (552)
.+..... ......+.+++..+.. +.+...+|++.|.+.... ..+...+ .+||+||
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~~------------~~la~~~--~giDlvl 199 (252)
T cd00845 135 TTPDTPTYTPLGWIIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDDD------------EELAEEV--PGIDVIL 199 (252)
T ss_pred ccccceeecCCCcccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccch------------HHHHhcC--CCccEEE
Confidence 3321100 0012233343322222 245677999999775430 1121111 5899999
Q ss_pred EccccCceeeeeccccccCCCCcEEEEECCCC
Q 008826 406 NGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 406 sGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG 437 (552)
+||.|....... .-++++.+-+|.=|
T Consensus 200 ggH~H~~~~~~~------~~~~~~v~~~g~~~ 225 (252)
T cd00845 200 GGHTHHLLEEPE------VVNGTLIVQAGKYG 225 (252)
T ss_pred cCCcCcccCCCc------ccCCEEEEeCChhH
Confidence 999998654311 12356666555433
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.8e-07 Score=85.08 Aligned_cols=75 Identities=20% Similarity=0.344 Sum_probs=46.2
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+|++++||+|..... .++++.+.+.++|.|+++||++.. |.. .+..+.|. .....+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~~----------~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GPR----------NPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------CcC----------CCCccccC--HHHHHHHHHhc
Confidence 589999999965322 334555556789999999999842 110 00111111 12233334332
Q ss_pred hhcCCeEEecCCchhc
Q 008826 278 VSKVPIMVVEGNHEIE 293 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~ 293 (552)
..+++.+.||||..
T Consensus 63 --~~~v~~V~GNhD~~ 76 (182)
T PRK09453 63 --ADKIIAVRGNCDSE 76 (182)
T ss_pred --CCceEEEccCCcch
Confidence 46899999999964
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.5e-07 Score=91.75 Aligned_cols=197 Identities=16% Similarity=0.191 Sum_probs=99.3
Q ss_pred EEEeCCCCCCCh---HHHHHHHHh----CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 202 AIVGDLGLTYNT---TCTINHMSS----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 202 avigD~~~~~~~---~~~l~~l~~----~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+++||+|.+... ......+.+ .++|.++++||++.. +. +... ... ......+...+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~--~~--~~~~----------~~~---~~~~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDL--WF--GDDE----------VVP---PAAHEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEE--Ee--cCCC----------CCC---hHHHHHHHHHH
Confidence 479999987543 222333332 489999999999942 21 1100 000 01111124455
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHH
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 354 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~ 354 (552)
+.+...++++.++||||.... ..+..+..... .......+.+++.+++++-... ++.....+.|+...
T Consensus 64 ~~~~~~~~v~~v~GNHD~~~~------~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~ 131 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFLLG------DFFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRL 131 (217)
T ss_pred HHHHCCCeEEEECCCchHHHH------hHHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHH
Confidence 555678999999999998522 11111111100 1111215677888888876542 23334445555544
Q ss_pred HhcccC------CCCCEEEEEcCCCccc------CCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc
Q 008826 355 LANVDR------SVTPWLVATWHPPWYS------SYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT 422 (552)
Q Consensus 355 L~~~~r------~~~~w~Iv~~H~P~y~------s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~ 422 (552)
+..... .-..|..-........ .............+.+..++.+++++++++||+|......
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~------ 205 (217)
T cd07398 132 GRNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHE------ 205 (217)
T ss_pred hCcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEE------
Confidence 322100 0000000000000000 0000011122345566777888999999999999775543
Q ss_pred cCCCCcEEEEECC
Q 008826 423 LDPCGPVHITIGD 435 (552)
Q Consensus 423 ~~~~G~vyiv~G~ 435 (552)
.++..|+++|+
T Consensus 206 --~~~~~~~n~G~ 216 (217)
T cd07398 206 --LDGKLYINLGD 216 (217)
T ss_pred --ECCEEEEECCC
Confidence 13678888886
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.1e-07 Score=94.12 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=31.0
Q ss_pred ceEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccc
Q 008826 198 PKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYA 237 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~ 237 (552)
.+||++++|+|++... .++++.+.+.++|+||++||+...
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 5899999999987421 234555557899999999999954
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.4e-07 Score=83.56 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECC
Q 008826 362 VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435 (552)
Q Consensus 362 ~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~ 435 (552)
...-+|||.|.|+++..... ..+.+++++++|+.++.||.|.-.|-.+-.. +-.|+.|+.+.+
T Consensus 157 ~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~~~~s---~v~Gi~y~Lvaa 219 (230)
T COG1768 157 GVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPNIGFS---NVRGIEYMLVAA 219 (230)
T ss_pred CcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCCCCcc---cccCceEEEEec
Confidence 34458999999998764321 2566788899999999999998776543221 224777765544
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-06 Score=89.30 Aligned_cols=188 Identities=18% Similarity=0.150 Sum_probs=96.0
Q ss_pred eEEEEEeCCCCCCC-----------------hHHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 199 KRIAIVGDLGLTYN-----------------TTCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 199 ~rfavigD~~~~~~-----------------~~~~l~~l~~~~pDfvl~-~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
++|++.+|+|.... ....++++.+.+|+.+++ +||++...... .+....
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~-------~~~~~~------ 67 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLA-------DYYAKI------ 67 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHH-------HHhhhc------
Confidence 47889999986421 133566666677887776 99999532100 000000
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC-------C-CCCCCcceEEEEcC-eEE
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------E-SGSLSSFYYSFNAG-GIH 331 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~-~~~~~~~yYsf~~G-~v~ 331 (552)
+ ........+.|+.+ ... +.++||||+.. +...+....+...+|.- . .......|.-++.+ +++
T Consensus 68 ~--~~~~~~~~~~ln~~--g~d-~~~lGNHe~d~--g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~k 140 (277)
T cd07410 68 E--DGDPHPMIAAMNAL--GYD-AGTLGNHEFNY--GLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVK 140 (277)
T ss_pred c--cCCCChHHHHHHhc--CCC-EEeecccCccc--CHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCE
Confidence 0 00001233444444 333 66789999853 22334444444433311 0 01122456667888 866
Q ss_pred EEEecccccC---------------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHH
Q 008826 332 FIMLGAYISY---------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 396 (552)
Q Consensus 332 fI~Ldt~~~~---------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll 396 (552)
+-++.-.... ....+..++..++|++ .+...+|+++|........... ..+.....|.
T Consensus 141 VgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~----~~~~~~~~la 213 (277)
T cd07410 141 VGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESL----TGENAAYELA 213 (277)
T ss_pred EEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccccc----CCccHHHHHH
Confidence 5555421110 0112234444555544 3567899999988654321000 0111223344
Q ss_pred HH-cCCcEEEEccccCce
Q 008826 397 YS-YGVDIVFNGHVHAYE 413 (552)
Q Consensus 397 ~~-~~VdlvlsGH~H~ye 413 (552)
++ .+||++|+||.|...
T Consensus 214 ~~~~~vD~IlgGHsH~~~ 231 (277)
T cd07410 214 EEVPGIDAILTGHQHRRF 231 (277)
T ss_pred hcCCCCcEEEeCCCcccc
Confidence 44 489999999999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.58 E-value=9e-07 Score=89.04 Aligned_cols=194 Identities=15% Similarity=0.105 Sum_probs=102.8
Q ss_pred eEEEEEeCCCCCC-----------ChHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHH
Q 008826 199 KRIAIVGDLGLTY-----------NTTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 266 (552)
Q Consensus 199 ~rfavigD~~~~~-----------~~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~ 266 (552)
++|++++|+|.-. .....++++.+.+++ +++.+||++...... . + .+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~-------~-------------~-~~ 59 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS-------T-------------A-TK 59 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch-------h-------------h-cC
Confidence 4788888888211 123456666666788 999999998432100 0 0 00
Q ss_pred HHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC-------CC---CCCCcceEEEEcCeEEEEE--
Q 008826 267 WDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------ES---GSLSSFYYSFNAGGIHFIM-- 334 (552)
Q Consensus 267 wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~~---~~~~~~yYsf~~G~v~fI~-- 334 (552)
.....+.|+.+ .. -+.++||||+... ...+........+|.- .. -..-+.|.-++.+++++-+
T Consensus 60 g~~~~~~l~~l--~~-d~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG 134 (257)
T cd07406 60 GKQMVPVLNAL--GV-DLACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLG 134 (257)
T ss_pred CccHHHHHHhc--CC-cEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEE
Confidence 11233444443 22 3668999998532 2233333333322210 00 0112467788889866544
Q ss_pred ecccccC------C---CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH-cCCcEE
Q 008826 335 LGAYISY------D---KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIV 404 (552)
Q Consensus 335 Ldt~~~~------~---~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~Vdlv 404 (552)
+.+.... . .-..-.+.+++.+++..+.+...+|++.|.+... . . ++.++ .+||++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d----~---~la~~~~~iD~I 199 (257)
T cd07406 135 LVEEEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------D----K---RLAREVPEIDLI 199 (257)
T ss_pred EecccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----H---HHHHhCCCCceE
Confidence 4332110 0 0112233344444333334667899999987421 1 1 22333 389999
Q ss_pred EEccccCceeeeeccccccCCCCcEEEEECCCCCccc
Q 008826 405 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 441 (552)
Q Consensus 405 lsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~ 441 (552)
|+||.|..... ..++++.+-+|.-|...+
T Consensus 200 lgGH~H~~~~~--------~~~~t~vv~~g~~g~~vg 228 (257)
T cd07406 200 LGGHDHEYILV--------QVGGTPIVKSGSDFRTVY 228 (257)
T ss_pred EecccceeEee--------eECCEEEEeCCcCcceEE
Confidence 99999986622 124667777777776544
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.6e-07 Score=89.65 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=24.4
Q ss_pred EEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008826 367 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 416 (552)
Q Consensus 367 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~ 416 (552)
|++.|.|.+- ...+.+++++||||+|.-++..
T Consensus 129 ilL~H~P~~~------------------~~~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYK------------------IFLEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEccccee------------------ccccCCCCEEEeCccCCCeEEE
Confidence 8888999764 1224589999999999877653
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.9e-07 Score=94.48 Aligned_cols=75 Identities=23% Similarity=0.355 Sum_probs=52.3
Q ss_pred eEEEEEeCCCCCC---C-----------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 199 KRIAIVGDLGLTY---N-----------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 199 ~rfavigD~~~~~---~-----------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
+||++++|+|++. + ....++.+.+.++||||++||+.+.+. |..
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~------------------Ps~---- 58 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNN------------------PSP---- 58 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCC------------------CCH----
Confidence 5899999999982 1 123556666789999999999995421 111
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEecCCchhccc
Q 008826 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQ 295 (552)
Q Consensus 265 ~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~ 295 (552)
..-..+.+.++.+. .++|++++.||||....
T Consensus 59 ~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 59 RALKLFLEALRRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCCchhc
Confidence 11234555666663 68999999999998643
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.2e-06 Score=84.54 Aligned_cols=177 Identities=16% Similarity=0.176 Sum_probs=89.3
Q ss_pred HHHHHHHhC-CCCEE-EEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchh
Q 008826 215 CTINHMSSN-EPDLV-LLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEI 292 (552)
Q Consensus 215 ~~l~~l~~~-~pDfv-l~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~ 292 (552)
..++++.+. ++|.+ +.+||+....... ...+.....+.|+. +++.++.||||+
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~~---------------------~~~~g~~~~~~l~~----~g~da~~GNHef 94 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGEA---------------------LYTRGQAMVDALNA----LGVDAMVGHWEF 94 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChHH---------------------hhcCChhHHHHHHh----hCCeEEeccccc
Confidence 345666666 89977 5799999532100 00011122333333 555555599998
Q ss_pred cccccCcchHHhhhhcCCCCCCC-------C-CCCcceEEEEcCeEE--EEEecccccCC----------CcHHHHHHHH
Q 008826 293 EAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAGGIH--FIMLGAYISYD----------KSGHQYKWLE 352 (552)
Q Consensus 293 ~~~~~~~~f~~y~~~f~~P~~~~-------~-~~~~~yYsf~~G~v~--fI~Ldt~~~~~----------~~~~Q~~WL~ 352 (552)
... ...+....+.+.+|.-.. + ..-..|.-++.++++ ||.+.+..... ......+.++
T Consensus 95 d~g--~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T cd07411 95 TYG--PERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQ 172 (264)
T ss_pred ccC--HHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHH
Confidence 632 233444444444432100 0 011235667888755 45554321000 0122344455
Q ss_pred HHHhccc-CCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH-cCCcEEEEccccCceeeeeccccccCCCCcEE
Q 008826 353 KDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (552)
Q Consensus 353 ~~L~~~~-r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vy 430 (552)
+.+++.. ..+...+|++.|.+.... . .+.++ .+||++|+||.|..... |. ..-++++.
T Consensus 173 ~~~~~~~~~~~~D~iI~l~H~g~~~~------------~---~la~~~~~iDlilgGH~H~~~~~-~~----~~~~~t~v 232 (264)
T cd07411 173 EVVVKLRREEGVDVVVLLSHNGLPVD------------V---ELAERVPGIDVILSGHTHERTPK-PI----IAGGGTLV 232 (264)
T ss_pred HHHHHHHHhCCCCEEEEEecCCchhh------------H---HHHhcCCCCcEEEeCcccccccC-cc----cccCCEEE
Confidence 4433321 245678999999875311 1 12223 47999999999964322 11 01246666
Q ss_pred EEECCCCC
Q 008826 431 ITIGDGGN 438 (552)
Q Consensus 431 iv~G~gG~ 438 (552)
+-+|.-|.
T Consensus 233 ~~~g~~~~ 240 (264)
T cd07411 233 VEAGSHGK 240 (264)
T ss_pred EEcCcccc
Confidence 66666555
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.9e-06 Score=83.69 Aligned_cols=182 Identities=20% Similarity=0.209 Sum_probs=91.2
Q ss_pred eEEEEEeCCCCCCC--------h---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHH
Q 008826 199 KRIAIVGDLGLTYN--------T---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 267 (552)
Q Consensus 199 ~rfavigD~~~~~~--------~---~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~w 267 (552)
++|++++|+|.... . ...++++.+..+++++.+||++..... .+ ....
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~--------------------~~~g 59 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SD--------------------LDKG 59 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hh--------------------hcCC
Confidence 47999999996421 1 234455544457899999999843110 00 0011
Q ss_pred HHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC-------CC-CCcceEEEEcC-eEE--EEEec
Q 008826 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------GS-LSSFYYSFNAG-GIH--FIMLG 336 (552)
Q Consensus 268 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-------~~-~~~~yYsf~~G-~v~--fI~Ld 336 (552)
....+.|+.+ ..-+ .++||||+.. +...+..+.+...+|.-.. +. .-..|.-++.+ +++ ||.+-
T Consensus 60 ~~~~~~ln~~--g~d~-~~~GNHefd~--G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~ 134 (257)
T cd07408 60 ETIIKIMNAV--GYDA-VTPGNHEFDY--GLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLT 134 (257)
T ss_pred cHHHHHHHhc--CCcE-EccccccccC--CHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeec
Confidence 1223444433 3444 5679999853 2334444444444443100 10 11235556777 655 45544
Q ss_pred ccc-cC--C-C------cHHHHHHHHHH-HhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEE
Q 008826 337 AYI-SY--D-K------SGHQYKWLEKD-LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 405 (552)
Q Consensus 337 t~~-~~--~-~------~~~Q~~WL~~~-L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdlvl 405 (552)
+.. .. . . -..-.+-+++. .....+.+...+|++.|........ .+. ...+.. .-.+||++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~-~~~-----~~~la~--~~~giDvIi 206 (257)
T cd07408 135 TPETATKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS-PWT-----STELAA--NVTGIDLII 206 (257)
T ss_pred CcCcccccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC-Ccc-----HHHHHH--hCCCceEEE
Confidence 321 00 0 0 00112223333 2222224567899999988654321 111 112222 124899999
Q ss_pred EccccCcee
Q 008826 406 NGHVHAYER 414 (552)
Q Consensus 406 sGH~H~yeR 414 (552)
.||.|....
T Consensus 207 gGH~H~~~~ 215 (257)
T cd07408 207 DGHSHTTIE 215 (257)
T ss_pred eCCCccccc
Confidence 999997654
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.4e-05 Score=80.32 Aligned_cols=188 Identities=17% Similarity=0.194 Sum_probs=99.6
Q ss_pred EEEEeCCCCCCChHHHH---HHHHh---CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 201 IAIVGDLGLTYNTTCTI---NHMSS---NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 201 favigD~~~~~~~~~~l---~~l~~---~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
|+|.||.|... ..+. +.+.+ .++|++|++||+.-. + +....++- .....| ..+..|.+.+
T Consensus 1 i~v~Gd~HG~~--~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~--~--~~~d~~~~-------~~p~k~-~~~~~f~~~~ 66 (262)
T cd00844 1 IAVEGCCHGEL--DKIYETLEKIEKKEGTKVDLLICCGDFQAV--R--NEADLKCM-------AVPPKY-RKMGDFYKYY 66 (262)
T ss_pred CEEEecCCccH--HHHHHHHHHHHHhcCCCCcEEEEcCCCCCc--C--Ccchhhhh-------ccchhh-hhhhhHHHHh
Confidence 58999999853 3333 33332 469999999999621 1 11111000 011222 2344455555
Q ss_pred HHh-hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcce-----EEEEcCeEEEEEecccc---cCC---
Q 008826 275 QNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFY-----YSFNAGGIHFIMLGAYI---SYD--- 342 (552)
Q Consensus 275 ~~l-~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~y-----Ysf~~G~v~fI~Ldt~~---~~~--- 342 (552)
+.. ...+|+++|.||||-.. .+.+ ++..+ ....+.+ ..++++|++|..|.... ++.
T Consensus 67 ~g~~~~p~~t~fi~GNHE~~~--------~l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~ 134 (262)
T cd00844 67 SGEKKAPILTIFIGGNHEASN--------YLWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGH 134 (262)
T ss_pred cCCccCCeeEEEECCCCCCHH--------HHHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEeccccccccccccc
Confidence 443 35678899999999531 1111 11110 0012233 23567899999997632 111
Q ss_pred -----CcHHHHHHHH-------HHHhcccCCCCCEEEEEcCCCcccCCCCCCch------------h---HHHHHHHHHH
Q 008826 343 -----KSGHQYKWLE-------KDLANVDRSVTPWLVATWHPPWYSSYSSHYRE------------A---ECMRVEMEAL 395 (552)
Q Consensus 343 -----~~~~Q~~WL~-------~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~------------~---~~~r~~l~~l 395 (552)
....++..+. +.|.... .+--|+++|.|+.......... . ..-...+..|
T Consensus 135 ~~~~~~t~~~~rs~y~~r~~~~~kl~~~~---~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~l 211 (262)
T cd00844 135 FERPPYSEDTKRSAYHVRNIEVFKLKQLK---QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEEL 211 (262)
T ss_pred ccCCCCCHHHHHHhhhhhHHHHHHHHhcC---CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHH
Confidence 1223333211 1122221 1225888999987653211100 0 0112467789
Q ss_pred HHHcCCcEEEEccccC-ceeeee
Q 008826 396 LYSYGVDIVFNGHVHA-YERSNR 417 (552)
Q Consensus 396 l~~~~VdlvlsGH~H~-yeR~~p 417 (552)
+++.+....|+||.|. |++..|
T Consensus 212 l~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 212 LKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred HHHhCCCEEEEecCCcccceecC
Confidence 9999999999999997 676644
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.3e-05 Score=81.95 Aligned_cols=84 Identities=14% Similarity=0.102 Sum_probs=45.6
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH--cCCcEEEEccccCceeeeeccccccCCC
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS--YGVDIVFNGHVHAYERSNRVFNYTLDPC 426 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~--~~VdlvlsGH~H~yeR~~pv~n~~~~~~ 426 (552)
+-+++.+++.+..+...+|++.|........... .+........++.+ .+||++|.||.|..... +. ..-+
T Consensus 178 e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~~ 250 (288)
T cd07412 178 EAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAGN 250 (288)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCcC
Confidence 3444444444334567799999987653221100 00011122334444 37999999999976532 10 0125
Q ss_pred CcEEEEECCCCCc
Q 008826 427 GPVHITIGDGGNL 439 (552)
Q Consensus 427 G~vyiv~G~gG~~ 439 (552)
+++.+..|.-|..
T Consensus 251 ~~~v~q~g~~g~~ 263 (288)
T cd07412 251 PRLVTQAGSYGKA 263 (288)
T ss_pred CEEEEecChhhce
Confidence 6777777776664
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.8e-05 Score=77.85 Aligned_cols=191 Identities=15% Similarity=0.228 Sum_probs=101.4
Q ss_pred EEEEEeCCCCCCCh---HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 200 RIAIVGDLGLTYNT---TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 200 rfavigD~~~~~~~---~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
||+++||.=..... ...+.++. +.++||++..||.+-. |... . ....+.|.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~g------g~gl------------~-------~~~~~~L~ 55 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAG------GKGI------------T-------PKIAKELL 55 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccC------CCCC------------C-------HHHHHHHH
Confidence 58899998554332 23445554 3579999999999832 2110 0 12233343
Q ss_pred HhhhcCCeEEecCCchhcccccCcchHHhhhhcC---CCCCC-CCCCCcceEEEEcCeEEEEEecc--cccCCCcHHHHH
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA---FPSEE-SGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYK 349 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~---~P~~~-~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~ 349 (552)
.+ .+-++ +.|||++... ....+.+... .|.+- .......|.-++.+++++-+++- .........-++
T Consensus 56 ~~--G~D~i-TlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~ 128 (255)
T cd07382 56 SA--GVDVI-TMGNHTWDKK----EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFR 128 (255)
T ss_pred hc--CCCEE-EecccccCcc----hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHH
Confidence 33 44444 4599998643 2333333221 11111 11123457778888876655543 211111112233
Q ss_pred HHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcE
Q 008826 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPV 429 (552)
Q Consensus 350 WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~v 429 (552)
-+++.+++.+. +...+||.+|.-.. .+ +.++.. ...-+||+++.||+|..-- +.++-|+|+.
T Consensus 129 ~~~~~v~~lk~-~~D~IIV~~H~g~t-------sE----k~ala~-~ldg~VdvIvGtHTHv~t~-----d~~il~~gTa 190 (255)
T cd07382 129 AADELLEELKE-EADIIFVDFHAEAT-------SE----KIALGW-YLDGRVSAVVGTHTHVQTA-----DERILPGGTA 190 (255)
T ss_pred HHHHHHHHHhc-CCCEEEEEECCCCC-------HH----HHHHHH-hCCCCceEEEeCCCCccCC-----ccEEeeCCeE
Confidence 45555555543 56789999996321 11 122322 1133599999999996422 1222367998
Q ss_pred EEEE-CCCCCcc
Q 008826 430 HITI-GDGGNLE 440 (552)
Q Consensus 430 yiv~-G~gG~~~ 440 (552)
|++. |.-|...
T Consensus 191 ~itd~Gm~G~~~ 202 (255)
T cd07382 191 YITDVGMTGPYD 202 (255)
T ss_pred EEecCccccCCC
Confidence 8873 6666643
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.7e-06 Score=81.72 Aligned_cols=190 Identities=16% Similarity=0.241 Sum_probs=98.0
Q ss_pred EEeCCCCCCChHH---H-HHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 203 IVGDLGLTYNTTC---T-INHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 203 vigD~~~~~~~~~---~-l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+|||+|++..... . ++-|... +.|.+.++||++. .|. |.. .+.+.-++..+.+..
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~--g~~---------------~~~~~~~~V~~~l~~ 62 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWI--GDD---------------EPPQLHRQVAQKLLR 62 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhh--cCC---------------cccHHHHHHHHHHHH
Confidence 6899999844322 2 2333333 4599999999993 332 221 011222333444444
Q ss_pred h-hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHH
Q 008826 277 L-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDL 355 (552)
Q Consensus 277 l-~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L 355 (552)
+ ...+|++.++||||+... ..+...+..- ...+.+--+++-|-+++++-.- .+.....++.|+....
T Consensus 63 ~a~~G~~v~~i~GN~Dfll~------~~f~~~~g~~-----~l~~~~~~~~l~g~~~Ll~HGD-~f~t~~~~y~~~r~~~ 130 (237)
T COG2908 63 LARKGTRVYYIHGNHDFLLG------KRFAQEAGGM-----TLLPDPIVLDLYGKRILLAHGD-TFCTDDRAYQWFRYKV 130 (237)
T ss_pred HHhcCCeEEEecCchHHHHH------HHHHhhcCce-----EEcCcceeeeecCcEEEEEeCC-cccchHHHHHHHHHHc
Confidence 4 356999999999997421 2222222100 0112233344444455555331 1223345555555443
Q ss_pred hcccCCCCCEE-EEEcCCCcc----------c-C--CCCCCch----hHHHHHHHHHHHHHcCCcEEEEccccCceeeee
Q 008826 356 ANVDRSVTPWL-VATWHPPWY----------S-S--YSSHYRE----AECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 417 (552)
Q Consensus 356 ~~~~r~~~~w~-Iv~~H~P~y----------~-s--~~~~~~~----~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~p 417 (552)
.. +|. .++.+.|.. + + ....-+. .+.+.+...+.+++++||.+++||+|.-+..
T Consensus 131 ~~------~~~~~lflnl~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~-- 202 (237)
T COG2908 131 HW------AWLQLLFLNLPLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIH-- 202 (237)
T ss_pred cc------HHHHHHHHHhHHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhc--
Confidence 22 111 122222221 0 1 0000000 1223456678889999999999999975443
Q ss_pred ccccccCCCCcEEEEECCCC
Q 008826 418 VFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 418 v~n~~~~~~G~vyiv~G~gG 437 (552)
+-.+..||+.|+..
T Consensus 203 ------~i~~~~yi~lGdW~ 216 (237)
T COG2908 203 ------NIPGITYINLGDWV 216 (237)
T ss_pred ------cCCCceEEecCcch
Confidence 23469999999987
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.5e-05 Score=76.05 Aligned_cols=194 Identities=16% Similarity=0.178 Sum_probs=103.9
Q ss_pred eEEEEEeCCCCCCCh---HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 199 ~rfavigD~~~~~~~---~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+||+++||.=..... ...+.++.+ .++||++..||++-. |... . ....+.|
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~g------G~Gi----------------~---~~~~~~L 55 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTH------GKGL----------------T---LKIYEFL 55 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCC------CCCC----------------C---HHHHHHH
Confidence 589999998643211 234455553 578999999999832 2110 0 1122233
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHh---hhhcCCCCCCCCCCCcceEEEEcCeEEEEEecc--cccCCC--cHHH
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAY---SSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGA--YISYDK--SGHQ 347 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y---~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~--~~~Q 347 (552)
.. ..+-++.+ |||++............ .....+|.. ..+..|..++.++.++-+++- ...... ...-
T Consensus 56 ~~--~GvDviT~-GNH~~Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~P 129 (266)
T TIGR00282 56 KQ--SGVNYITM-GNHTWFQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNP 129 (266)
T ss_pred Hh--cCCCEEEc-cchhccCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCH
Confidence 32 35666665 99999633100001111 111122321 223346667888766655542 211111 1112
Q ss_pred HHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCC
Q 008826 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (552)
Q Consensus 348 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G 427 (552)
++-+++.+++.+. +++.+||.+|.-.. .. +.....+.+.+|++|+.-|+|..---. .+-|+|
T Consensus 130 f~~~d~~i~~lk~-~~d~IIVd~Haeat-----------sE-K~a~~~~ldg~vsaVvGtHtHV~TaD~-----~il~~g 191 (266)
T TIGR00282 130 FKVLKELINMLKK-DCDLIFVDFHAETT-----------SE-KNAFGMAFDGYVTAVVGTHTHVPTADL-----RILPKG 191 (266)
T ss_pred HHHHHHHHHhhhc-CCCEEEEEeCCCCH-----------HH-HHHHHHHhCCCccEEEeCCCCCCCCcc-----eeCCCC
Confidence 2334444444432 46789999995321 11 334556667799999999999532211 123689
Q ss_pred cEEEE-ECCCCCccc
Q 008826 428 PVHIT-IGDGGNLEK 441 (552)
Q Consensus 428 ~vyiv-~G~gG~~~~ 441 (552)
+-||+ +|.-|...+
T Consensus 192 tayitD~Gm~G~~~s 206 (266)
T TIGR00282 192 TAYITDVGMTGPFGS 206 (266)
T ss_pred CEEEecCCcccCccc
Confidence 99998 477776543
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=6.4e-05 Score=76.58 Aligned_cols=203 Identities=16% Similarity=0.211 Sum_probs=103.7
Q ss_pred ceEEEEEeCCCCCCC--------------hHHHHHHHH----hCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 198 PKRIAIVGDLGLTYN--------------TTCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 198 ~~rfavigD~~~~~~--------------~~~~l~~l~----~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
.++|++.+|+|.... ..+.++++. +.+++ +++.+||.+....+
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~------------------ 66 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL------------------ 66 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec------------------
Confidence 689999999996421 122334333 23555 67789999953211
Q ss_pred cccccHHHHHHHHHHHHHhhhcCCe-EEecCCchhccccc-CcchHHhhhhcCCCCC--------CCCC---CCcceEEE
Q 008826 259 IHETYQPRWDYWGRFMQNLVSKVPI-MVVEGNHEIEAQAG-NQTFVAYSSRFAFPSE--------ESGS---LSSFYYSF 325 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~~~iP~-~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~--------~~~~---~~~~yYsf 325 (552)
...+..++....++|+.+ ++ ..++||||+..... -..+..+.....+|-- +.+. ....|.-+
T Consensus 67 -~~~~~~~g~~~~~~mN~m----gyDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~ 141 (282)
T cd07407 67 -SDASPPPGSYSNPIFRMM----PYDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKF 141 (282)
T ss_pred -eeeecCCChHHHHHHHhc----CCcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEE
Confidence 111111223344555544 33 57899999953211 1112223232223310 0001 12336666
Q ss_pred EcC-eEEE--EEeccccc-------CCC--cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHH
Q 008826 326 NAG-GIHF--IMLGAYIS-------YDK--SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEME 393 (552)
Q Consensus 326 ~~G-~v~f--I~Ldt~~~-------~~~--~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~ 393 (552)
+.+ ++++ |.+-+... +.. ...+.+|+.+.|++ .+...+|++.|....... + ..+...
T Consensus 142 ~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~ 210 (282)
T cd07407 142 TTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHD 210 (282)
T ss_pred EcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHH
Confidence 776 7664 44433211 011 12233488877874 346679999998764321 1 111112
Q ss_pred HHHHHc-CCc-EEEEccccCceeeeeccccccCCCCcEEEEECCCCCccc
Q 008826 394 ALLYSY-GVD-IVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 441 (552)
Q Consensus 394 ~ll~~~-~Vd-lvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~ 441 (552)
.+.++. ++| ++|.||+|..... ++ .+|+..+-.|.-|...+
T Consensus 211 ~la~~~~~id~~Ii~GHsH~~~~~-~~------~~~~~ivq~G~~g~~lg 253 (282)
T cd07407 211 AIRKIFPDTPIQFLGGHSHVRDFT-QY------DSSSTGLESGRYLETVG 253 (282)
T ss_pred HHHHhCCCCCEEEEeCCcccccce-ec------cCcEEEEeccchhhceE
Confidence 233334 577 7999999975332 11 24677677777776544
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.1e-05 Score=72.90 Aligned_cols=38 Identities=18% Similarity=0.236 Sum_probs=29.3
Q ss_pred eEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCccc
Q 008826 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 199 ~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
++|+++||+|.... .....+.....++|+|||+||.+.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~ 40 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTS 40 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCC
Confidence 68999999998753 233444445679999999999994
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.15 E-value=2e-05 Score=86.70 Aligned_cols=202 Identities=17% Similarity=0.203 Sum_probs=102.8
Q ss_pred CceEEEEEeCCCCCCCh------HHHHHHHH---------hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccc
Q 008826 197 YPKRIAIVGDLGLTYNT------TCTINHMS---------SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 261 (552)
Q Consensus 197 ~~~rfavigD~~~~~~~------~~~l~~l~---------~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e 261 (552)
.+.+++++||+|.+... ...++.+. +.+++.++++||++...+.. .+... +.....
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~-p~~~~--------~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIY-PGQEE--------ELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCC-ccchh--------hccchh
Confidence 36899999999987531 22344455 45799999999999531100 00000 000001
Q ss_pred ccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccC--cchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccc
Q 008826 262 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI 339 (552)
Q Consensus 262 ~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~ 339 (552)
.+ .+.+.+.++++.+...+|+++++||||....... .....+...+... ......+ -+.+++++.++++.-...
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~--~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEH--NVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcC--CeEEecC-CeEEEECCEEEEEECCCC
Confidence 11 2234566677777788999999999997532111 1112222222111 0011122 235778888887775421
Q ss_pred -----cCC---CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccC
Q 008826 340 -----SYD---KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 340 -----~~~---~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+- ....-.+.|++.|+.-. -+| ..-.+.|.+.... .+ +.-+.-.|++++||.|.
T Consensus 389 idDl~~~i~~~s~~~p~~~m~~~l~~rH--laP--t~p~~~~~~p~~~-D~------------lvi~~~Pdv~~~GH~H~ 451 (504)
T PRK04036 389 IDDVISLIPGASYEKPGKAMEELLKRRH--LAP--IYGGRTPIAPEKE-DY------------LVIDEVPDIFHTGHVHI 451 (504)
T ss_pred HHHHHhhcccccccCHHHHHHHHHHhcc--cCC--CCCCCEEeCcCCC-CC------------EEEecCCCEEEeCCCCc
Confidence 110 11223455666665411 010 0001122232111 10 11112359999999998
Q ss_pred ceeeeeccccccCCCCcEEEEECCC
Q 008826 412 YERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 412 yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
+.... -.|+.+|..|+-
T Consensus 452 ~~~~~--------~~g~~~IN~gsf 468 (504)
T PRK04036 452 NGYGK--------YRGVLLINSGTW 468 (504)
T ss_pred cceEE--------ECCEEEEECCcc
Confidence 76542 247888877764
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.9e-05 Score=79.16 Aligned_cols=174 Identities=18% Similarity=0.239 Sum_probs=91.6
Q ss_pred eEEEEEeCCCCCC-------------------C---hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCC
Q 008826 199 KRIAIVGDLGLTY-------------------N---TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFS 255 (552)
Q Consensus 199 ~rfavigD~~~~~-------------------~---~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~ 255 (552)
++|++.+|+|... . ....++++.+..++ +++.+||++......
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~-------------- 66 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWY-------------- 66 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchh--------------
Confidence 4688888888531 1 12345666556677 566699998532110
Q ss_pred CCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC-----C------CCCcceEE
Q 008826 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-----G------SLSSFYYS 324 (552)
Q Consensus 256 ~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-----~------~~~~~yYs 324 (552)
.. .+.....+.|+.+ ... +.++||||+... ...+..+.+...+|.-.. . ..-..|.-
T Consensus 67 -----~~--~~g~~~~~~ln~~--g~D-~~~lGNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i 134 (281)
T cd07409 67 -----TL--YKGNADAEFMNLL--GYD-AMTLGNHEFDDG--VEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTI 134 (281)
T ss_pred -----hh--cCChHHHHHHHhc--CCC-EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEE
Confidence 00 0112233444443 344 456799999632 233444444443332110 0 11234666
Q ss_pred EEcCeEEE--EEeccccc-C--C-----CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHH
Q 008826 325 FNAGGIHF--IMLGAYIS-Y--D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 394 (552)
Q Consensus 325 f~~G~v~f--I~Ldt~~~-~--~-----~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ 394 (552)
++.+++++ |.+-+... . . .-.+..+.+++.+++.+..+...+|++.|..... . . .
T Consensus 135 ~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~--------d----~---~ 199 (281)
T cd07409 135 LTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV--------D----K---E 199 (281)
T ss_pred EEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh--------H----H---H
Confidence 78888665 44433210 0 0 0123345566666665444577799999976321 0 1 2
Q ss_pred HHHH-cCCcEEEEccccCce
Q 008826 395 LLYS-YGVDIVFNGHVHAYE 413 (552)
Q Consensus 395 ll~~-~~VdlvlsGH~H~ye 413 (552)
+.++ .+||+++.||.|...
T Consensus 200 la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 200 IARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHcCCCCcEEEeCCcCccc
Confidence 2233 489999999999753
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.13 E-value=7.3e-05 Score=90.37 Aligned_cols=184 Identities=18% Similarity=0.206 Sum_probs=95.5
Q ss_pred CceEEEEEeCCCCCCC-h---HHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHH
Q 008826 197 YPKRIAIVGDLGLTYN-T---TCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-~---~~~l~~l~~~~pDfvl~-~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~ 271 (552)
..++|++++|+|.... . ...++++.+.+|+.+++ +||++..... ... .+.....
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-------------------~~~--~~g~~~~ 717 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-------------------SNL--LKGLPVL 717 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-------------------hhh--cCChHHH
Confidence 4699999999996532 2 34566666678887766 9999843210 000 0112233
Q ss_pred HHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcC------------CCC---C----CCCC---CCcceEEEEcCe
Q 008826 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA------------FPS---E----ESGS---LSSFYYSFNAGG 329 (552)
Q Consensus 272 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~------------~P~---~----~~~~---~~~~yYsf~~G~ 329 (552)
+.|+.+ -.-+.++||||+... ...+..+..... +|- | ..+. ....|.-++.++
T Consensus 718 ~~ln~l---g~d~~~~GNHEfd~g--~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G 792 (1163)
T PRK09419 718 KMMKEM---GYDASTFGNHEFDWG--PDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG 792 (1163)
T ss_pred HHHhCc---CCCEEEecccccccC--hHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC
Confidence 444433 223569999998632 222222222211 111 0 0011 123466678888
Q ss_pred EEE--EEecccc-cC-C--------CcHHHHHHHHHHHhccc-CCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHH
Q 008826 330 IHF--IMLGAYI-SY-D--------KSGHQYKWLEKDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 396 (552)
Q Consensus 330 v~f--I~Ldt~~-~~-~--------~~~~Q~~WL~~~L~~~~-r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll 396 (552)
+++ |.+-+.. .. . .-....+.+++..++.+ ..+...+|++.|.......... + ....+|.
T Consensus 793 ~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~~--~-----~~~~~lA 865 (1163)
T PRK09419 793 KKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTTG--E-----ITGLELA 865 (1163)
T ss_pred EEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccccc--c-----cHHHHHH
Confidence 654 4443321 00 0 01122333444444433 2456789999998865321111 1 1223444
Q ss_pred HHc-CCcEEEEccccCce
Q 008826 397 YSY-GVDIVFNGHVHAYE 413 (552)
Q Consensus 397 ~~~-~VdlvlsGH~H~ye 413 (552)
++. +||++|.||+|..-
T Consensus 866 ~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 866 KKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred HhCCCCCEEEeCCCCccc
Confidence 444 79999999999753
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.5e-05 Score=74.42 Aligned_cols=197 Identities=16% Similarity=0.196 Sum_probs=97.2
Q ss_pred EEEeCCCCCCCh--H----HHHHHHHhC-----CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHH
Q 008826 202 AIVGDLGLTYNT--T----CTINHMSSN-----EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270 (552)
Q Consensus 202 avigD~~~~~~~--~----~~l~~l~~~-----~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~ 270 (552)
+++||+|++... . ..++.+... ++|.|+++||++...... .+... .+ ..+.....+..+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~~~-~~--------~~~~~~~~~~~~ 71 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQEE-EL--------EILDIYEQYEEA 71 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccchh-hh--------hhhhHHHHHHHH
Confidence 689999976432 1 223333333 569999999999531000 00000 00 000112235566
Q ss_pred HHHHHHhhhcCCeEEecCCchhccccc--CcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccc--cc---C--
Q 008826 271 GRFMQNLVSKVPIMVVEGNHEIEAQAG--NQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY--IS---Y-- 341 (552)
Q Consensus 271 ~~~l~~l~~~iP~~~v~GNHD~~~~~~--~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~--~~---~-- 341 (552)
.++++.+...+|+++++||||...... ......+...+. +.+ -....+.+ .+.+++.+|++.... .+ +
T Consensus 72 ~~~l~~L~~~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~-~~~-v~~l~Np~-~~~~~g~~i~~~~G~~~~d~~~~~~ 148 (243)
T cd07386 72 AEYLSDVPSHIKIIIIPGNHDAVRQAEPQPALPEEIRKLFL-PGN-VEFVSNPA-LVKIHGVDVLIYHGRSIDDVVKLIP 148 (243)
T ss_pred HHHHHhcccCCeEEEeCCCCCcccccCCCCCccHHHHhhcC-CCc-eEEeCCCC-EEEECCEEEEEECCCCHHHHHHhCC
Confidence 777888877899999999999853211 111223332221 100 00112222 577888888765321 00 1
Q ss_pred -CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccc
Q 008826 342 -DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN 420 (552)
Q Consensus 342 -~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n 420 (552)
.....-.++++..|.+.. -.|. .-.-.|.+... .++ +..+...+++|+||.|.+....
T Consensus 149 ~~~~~~~~~~~~~~l~~~h--l~P~--~~~~~~~~~~~-~~~------------~~~~~~p~vii~Gh~h~~~~~~---- 207 (243)
T cd07386 149 GLSYDKPGKAMEELLKRRH--LAPI--YGGRTPIAPEP-EDY------------LVIDEVPDILHTGHVHVYGVGV---- 207 (243)
T ss_pred CCCcccHHHHHHHHHhhcc--cCCC--CCCCEeeCCCC-CCC------------EEecCCCCEEEECCCCchHhEE----
Confidence 112233566666665521 1110 00001111110 000 1112367899999999876653
Q ss_pred cccCCCCcEEEEECCC
Q 008826 421 YTLDPCGPVHITIGDG 436 (552)
Q Consensus 421 ~~~~~~G~vyiv~G~g 436 (552)
-+|..+|..|+-
T Consensus 208 ----~~~~~~vn~Gsf 219 (243)
T cd07386 208 ----YRGVLLVNSGTW 219 (243)
T ss_pred ----ECCEEEEECCCC
Confidence 247888877763
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.08 E-value=1e-05 Score=81.14 Aligned_cols=73 Identities=26% Similarity=0.439 Sum_probs=49.1
Q ss_pred eEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 199 ~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
+||++++|+|++... ...++.+.+.++|+|+++||++... . + . ..
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~------~------------p--~--~~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTA------N------------P--P--AE 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCC------C------------C--C--HH
Confidence 589999999987421 1234445567899999999999531 1 0 0 11
Q ss_pred HHHHHHHHHHHhhh-c-CCeEEecCCchhc
Q 008826 266 RWDYWGRFMQNLVS-K-VPIMVVEGNHEIE 293 (552)
Q Consensus 266 ~wd~~~~~l~~l~~-~-iP~~~v~GNHD~~ 293 (552)
....+.++++.+.. . +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 22334556666642 3 8999999999985
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.04 E-value=9.6e-06 Score=78.84 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=25.2
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~-~~pDfvl~~GDl~Y 236 (552)
||+++||+|..... .++++.+.. .++|.++++||+++
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 68999999965321 223333322 36899999999995
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.8e-05 Score=79.81 Aligned_cols=111 Identities=18% Similarity=0.328 Sum_probs=71.0
Q ss_pred ceEEEEEeCCCCCCCh------------------HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 198 PKRIAIVGDLGLTYNT------------------TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 198 ~~rfavigD~~~~~~~------------------~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
++|++.++|.|.-.+. ...+..+. ..+||.++++||+.+. |...+
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDe------G~~~~---------- 111 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDE------GQWAG---------- 111 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEecccccc------CccCC----------
Confidence 7999999999976421 11222222 3599999999999953 33211
Q ss_pred cccccHHHHHHHHHHHHHhh---hcCCeEEecCCchhcccccC--cchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEE
Q 008826 259 IHETYQPRWDYWGRFMQNLV---SKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFI 333 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~---~~iP~~~v~GNHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI 333 (552)
.++|....+.++.+. ..+|++.++||||++..... ..-..|.+.| ++...+|+.|+..|+
T Consensus 112 -----~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~f----------g~~~r~f~v~~~tf~ 176 (410)
T KOG3662|consen 112 -----DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVF----------GPTERRFDVGNLTFV 176 (410)
T ss_pred -----hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccccccccchhHHHHHHHhh----------cchhhhhccCCceeE
Confidence 245655444455542 47999999999999743211 1113333333 235667999999999
Q ss_pred Eecccc
Q 008826 334 MLGAYI 339 (552)
Q Consensus 334 ~Ldt~~ 339 (552)
++|++.
T Consensus 177 ~~d~~~ 182 (410)
T KOG3662|consen 177 MFDSNA 182 (410)
T ss_pred Eeeehh
Confidence 999864
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.3e-05 Score=76.27 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=20.2
Q ss_pred HHHHHHHHcCCcEEEEccccCcee
Q 008826 391 EMEALLYSYGVDIVFNGHVHAYER 414 (552)
Q Consensus 391 ~l~~ll~~~~VdlvlsGH~H~yeR 414 (552)
.+..+|+.++.++++.||+|.-..
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~~ 181 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEGG 181 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeecC
Confidence 577888999999999999997543
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00021 Score=73.07 Aligned_cols=187 Identities=18% Similarity=0.152 Sum_probs=88.7
Q ss_pred eEEEEEeCCCCCCC-----------hHHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCCCCcCCCCCCccccc
Q 008826 199 KRIAIVGDLGLTYN-----------TTCTINHMSSN----EP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 262 (552)
Q Consensus 199 ~rfavigD~~~~~~-----------~~~~l~~l~~~----~p-Dfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~ 262 (552)
++|++.+|+|.... ....++++.+. ++ -+++.+||+... +. ....
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~G-------s~------------~~~~ 61 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTG-------VP------------ESDL 61 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCC-------ch------------hHHh
Confidence 47899999997521 12345555432 33 488999999842 21 0000
Q ss_pred cHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC------CCC-CCCcceEEEEcCeEEEEE-
Q 008826 263 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE------ESG-SLSSFYYSFNAGGIHFIM- 334 (552)
Q Consensus 263 y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~------~~~-~~~~~yYsf~~G~v~fI~- 334 (552)
+ +.....+.|+.+ ..-. .++||||+... ...+........+|.- ..+ .....|.-++.+++++-+
T Consensus 62 ~--~g~~~~~~~n~~--g~Da-~~~GNHEfD~G--~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgvi 134 (285)
T cd07405 62 Q--DAEPDFRGMNLV--GYDA-MAVGNHEFDNP--LEVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVI 134 (285)
T ss_pred c--CcchHHHHHHhh--CCcE-EeecccccccC--HHHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEE
Confidence 0 111223444443 3333 46699999632 2223333322222211 001 112346667788866544
Q ss_pred -ecccc-cC--C----C---cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcE
Q 008826 335 -LGAYI-SY--D----K---SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDI 403 (552)
Q Consensus 335 -Ldt~~-~~--~----~---~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~Vdl 403 (552)
+-+.. .. . . -....+=+++.+++.+..+...+|++.|............. .....+...+...+||+
T Consensus 135 G~t~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~~~--~~~~~lA~~~~~~giD~ 212 (285)
T cd07405 135 GLTTDDTAKIGNPAYFEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGSNA--PGDVEMARALPAGGLDL 212 (285)
T ss_pred EecccccccccCcCCcCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccccC--chHHHHHHhcCCCCCCE
Confidence 43311 00 0 0 01111222222222222356779999998875322100000 01122333322358999
Q ss_pred EEEccccCce
Q 008826 404 VFNGHVHAYE 413 (552)
Q Consensus 404 vlsGH~H~ye 413 (552)
+|.||.|...
T Consensus 213 IigGHsH~~~ 222 (285)
T cd07405 213 IVGGHSQDPV 222 (285)
T ss_pred EEeCCCCccc
Confidence 9999999754
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.9e-05 Score=81.32 Aligned_cols=74 Identities=18% Similarity=0.256 Sum_probs=47.3
Q ss_pred eEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 199 ~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
+||+++||+|++... ...++.+.+.+||+||++||+..... .. . ..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~----~~-------------~----~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRK----AI-------------T----QN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCC----CC-------------C----HH
Confidence 589999999987421 22344445789999999999984210 00 0 11
Q ss_pred HHHHHHH-HHHHhh-hcCCeEEecCCchhc
Q 008826 266 RWDYWGR-FMQNLV-SKVPIMVVEGNHEIE 293 (552)
Q Consensus 266 ~wd~~~~-~l~~l~-~~iP~~~v~GNHD~~ 293 (552)
......+ +++.+. ..+|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 2222222 244442 479999999999975
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.3e-05 Score=82.78 Aligned_cols=73 Identities=23% Similarity=0.409 Sum_probs=47.8
Q ss_pred eEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 199 ~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
+||++++|+|++... ...++.+.+.+||+||++||+... +.. .. .
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~p--------------~~--~ 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GSP--------------PS--Y 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CCC--------------cH--H
Confidence 589999999987421 123444556899999999999842 110 00 1
Q ss_pred HHHHHHHHHHHhh-hcCCeEEecCCchhc
Q 008826 266 RWDYWGRFMQNLV-SKVPIMVVEGNHEIE 293 (552)
Q Consensus 266 ~wd~~~~~l~~l~-~~iP~~~v~GNHD~~ 293 (552)
....+.++++.+. ..+|+++++||||..
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSV 87 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCCh
Confidence 1122344445543 368999999999975
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.1e-05 Score=72.74 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=39.1
Q ss_pred EEEeCCCCCCCh----------------HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 202 AIVGDLGLTYNT----------------TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 202 avigD~~~~~~~----------------~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
.+++|+|.+... ...++.+.+ .++|.|+++||++.. +.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 57 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFG------GK------------------ 57 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCC------CC------------------
Confidence 367888877532 123344443 268999999999942 21
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhc
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
...+ .+.++.+ ..|++.++||||..
T Consensus 58 ~~~~---~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 58 AGTE---LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred hHHH---HHHHHhC--CCCeEEEeCCCCch
Confidence 0111 3334433 46899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=3.2e-05 Score=75.88 Aligned_cols=37 Identities=27% Similarity=0.405 Sum_probs=27.2
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHhC-CCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSSN-EPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~~-~pDfvl~~GDl~Y 236 (552)
|++++||+|..... .++++++... +.|-++++||+++
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 89999999986432 3345554323 5789999999994
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00056 Score=75.81 Aligned_cols=185 Identities=16% Similarity=0.145 Sum_probs=99.9
Q ss_pred CceEEEEEeCCCCCCC------------h----HHHHHHHHhC-CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcc
Q 008826 197 YPKRIAIVGDLGLTYN------------T----TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259 (552)
Q Consensus 197 ~~~rfavigD~~~~~~------------~----~~~l~~l~~~-~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~ 259 (552)
..++|++.+|+|.... . ...++++.+. +..++|.+||++..+...+
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~----------------- 87 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSD----------------- 87 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccc-----------------
Confidence 4799999999997533 1 1234555444 4468999999995421110
Q ss_pred ccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC------C---CCCCCcceEEEEcCeE
Q 008826 260 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE------E---SGSLSSFYYSFNAGGI 330 (552)
Q Consensus 260 ~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~------~---~~~~~~~yYsf~~G~v 330 (552)
+........+.|..+. .=..++||||+... ...+..+.+...+|.- . .....+.|.-++.+++
T Consensus 88 ---~~~~g~~~~~~mN~m~---yDa~tiGNHEFd~g--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~ 159 (517)
T COG0737 88 ---YLTKGEPTVDLLNALG---YDAMTLGNHEFDYG--LEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGV 159 (517)
T ss_pred ---cccCCChHHHHHhhcC---CcEEeecccccccC--HHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCe
Confidence 0011122334454431 22578999999632 2334444444444410 1 1123356888899986
Q ss_pred E--EEEeccc-c-cC---C-----CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH
Q 008826 331 H--FIMLGAY-I-SY---D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS 398 (552)
Q Consensus 331 ~--fI~Ldt~-~-~~---~-----~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~ 398 (552)
+ +|.+.+. . .+ . .-....+++++.+.+.+.....-+|++.|.+........... ........
T Consensus 160 KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~-~~~~~~~~----- 233 (517)
T COG0737 160 KIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEV-PGDVDVAV----- 233 (517)
T ss_pred EEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccc-cccccccc-----
Confidence 5 4554431 1 01 1 123455666666666554436779999999876542211110 00000000
Q ss_pred cCCcEEEEccccCc
Q 008826 399 YGVDIVFNGHVHAY 412 (552)
Q Consensus 399 ~~VdlvlsGH~H~y 412 (552)
.++|+++.||.|.+
T Consensus 234 ~~iD~i~~GH~H~~ 247 (517)
T COG0737 234 PGIDLIIGGHSHTV 247 (517)
T ss_pred cCcceEeccCCccc
Confidence 34999999999954
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00085 Score=74.86 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=57.2
Q ss_pred EEecCCchhcccccCcchHHhhhhcCCCCCC------CC----CCCcceEEEEcCeE--EEEEeccccc-C---CCc---
Q 008826 284 MVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE------SG----SLSSFYYSFNAGGI--HFIMLGAYIS-Y---DKS--- 344 (552)
Q Consensus 284 ~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~----~~~~~yYsf~~G~v--~fI~Ldt~~~-~---~~~--- 344 (552)
+.++||||+.. +...+..+.+...+|--. .. ..-..|.-++.+++ -||.|.+... . ...
T Consensus 85 a~~lGNHEFd~--G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~ 162 (550)
T TIGR01530 85 FFTLGNHEFDA--GNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDI 162 (550)
T ss_pred EEEeccccccC--CHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCce
Confidence 67899999863 223344444443333210 00 11235666788874 4666644211 0 000
Q ss_pred --HHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCce
Q 008826 345 --GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYE 413 (552)
Q Consensus 345 --~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 413 (552)
....+=+++..+..++.....+|++.|..... . ..+.++. +||++|.||+|..-
T Consensus 163 ~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 163 KFIDEIAAAQIAANALKQQGINKIILLSHAGFEK--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred EECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 01112222222222223567799999965321 1 1233333 79999999999853
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00085 Score=74.98 Aligned_cols=185 Identities=17% Similarity=0.164 Sum_probs=90.2
Q ss_pred CceEEEEEeCCCCCCC--------h---HHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 197 YPKRIAIVGDLGLTYN--------T---TCTINHMSSN----EP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 197 ~~~rfavigD~~~~~~--------~---~~~l~~l~~~----~p-Dfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
..++|++++|+|.... . ...++++.+. ++ -+++.+||+...... .
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-------------------s 93 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 93 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-------------------h
Confidence 4799999999997532 1 2234444421 33 478899999842110 0
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCC-------CCC-CCCcceEEEEcCeEEE
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------ESG-SLSSFYYSFNAGGIHF 332 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~~~-~~~~~yYsf~~G~v~f 332 (552)
..+ ......+.|+.+ ..- +.++||||+... ...+..+.....+|-- ..+ ..-..|.-++.+++++
T Consensus 94 ~~~--~g~~~i~~mN~~--g~D-a~tlGNHEFD~G--~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kI 166 (551)
T PRK09558 94 DLQ--DAEPDFRGMNLI--GYD-AMAVGNHEFDNP--LSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKI 166 (551)
T ss_pred hhc--CCchhHHHHhcC--CCC-EEcccccccCcC--HHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEE
Confidence 000 011223444443 333 455799998632 2233333333333321 001 1123466678888665
Q ss_pred EEec--cccc--C-CC-------cHHHHHHHHHHHhcccC-CCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc
Q 008826 333 IMLG--AYIS--Y-DK-------SGHQYKWLEKDLANVDR-SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY 399 (552)
Q Consensus 333 I~Ld--t~~~--~-~~-------~~~Q~~WL~~~L~~~~r-~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~ 399 (552)
-++. +... . .. -....+-+++.+++.+. .+...+|++.|.......... .... .-..|.++.
T Consensus 167 giiG~~t~~~~~~~~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~----~d~~la~~~ 241 (551)
T PRK09558 167 AVIGLTTEDTAKIGNPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAP----GDVEMARSL 241 (551)
T ss_pred EEEEEeccccccccCCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCc----cHHHHHHhC
Confidence 4443 2110 0 00 01112223333333321 356779999998875322110 0000 002233333
Q ss_pred ---CCcEEEEccccCc
Q 008826 400 ---GVDIVFNGHVHAY 412 (552)
Q Consensus 400 ---~VdlvlsGH~H~y 412 (552)
+||++|.||.|..
T Consensus 242 ~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 242 PAGGLDMIVGGHSQDP 257 (551)
T ss_pred CccCceEEEeCCCCcc
Confidence 7999999999975
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0012 Score=68.47 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=25.3
Q ss_pred eEEEEEeCCCCCCC----h---HHHHHHHHhC----C-CCEEEEcCCccc
Q 008826 199 KRIAIVGDLGLTYN----T---TCTINHMSSN----E-PDLVLLVGDVTY 236 (552)
Q Consensus 199 ~rfavigD~~~~~~----~---~~~l~~l~~~----~-pDfvl~~GDl~Y 236 (552)
++|++.+|+|.... . ...++++.+. . .-+++.+||+..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~q 50 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFI 50 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCcccc
Confidence 47899999997632 1 2345555432 3 348899999984
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00031 Score=64.71 Aligned_cols=52 Identities=13% Similarity=-0.079 Sum_probs=32.3
Q ss_pred EEEEcCCCcccCCCC-CC----chhHHHHHHHHHHHHHcCCcEEEEcccc-Cceeeeec
Q 008826 366 LVATWHPPWYSSYSS-HY----REAECMRVEMEALLYSYGVDIVFNGHVH-AYERSNRV 418 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~-~~----~~~~~~r~~l~~ll~~~~VdlvlsGH~H-~yeR~~pv 418 (552)
-|++.|.|++..... .. .....-...+.+++++.+..+.|+||.| .|||- |-
T Consensus 71 DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf 128 (150)
T cd07380 71 DILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PY 128 (150)
T ss_pred CEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-Cc
Confidence 477778777654211 00 0001113466778888899999999999 66664 53
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00024 Score=66.95 Aligned_cols=70 Identities=21% Similarity=0.435 Sum_probs=42.9
Q ss_pred EEEeCCCCCCCh--------------HHHHHH----HHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 202 AIVGDLGLTYNT--------------TCTINH----MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 202 avigD~~~~~~~--------------~~~l~~----l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
++++|+|++... ..++++ +.+.+||.++++||+++... +. .
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~----~~----------------~- 59 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFG----GL----------------S- 59 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccc----cc----------------C-
Confidence 368899887421 123333 34578999999999995311 10 0
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhc
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
...+.... .+......+|++.++||||..
T Consensus 60 ~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 60 RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 11222222 333345678999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0015 Score=66.62 Aligned_cols=183 Identities=22% Similarity=0.292 Sum_probs=101.9
Q ss_pred eEEEEEeCCCCCC-ChHHHHHHHHhC---CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTY-NTTCTINHMSSN---EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 199 ~rfavigD~~~~~-~~~~~l~~l~~~---~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+||+|-|+.|... +...++..+.+. +.|++|++||+---. |+..-.| -.+...|+..-+.|.-.-
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavR----n~~D~~s-------iavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVR----NEQDLKS-------IAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhc----chhhccc-------ccCCHHHHHHHHHHHHhC
Confidence 5899999999764 334566666654 789999999996321 2221111 112233432222222122
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEE-----EEcCeEEEEEeccc---ccCCCc--
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYS-----FNAGGIHFIMLGAY---ISYDKS-- 344 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYs-----f~~G~v~fI~Ldt~---~~~~~~-- 344 (552)
.++.+.+|.+++-||||..+ |.. .+|..+ -...+.||- .++||+|+-.|..- .+|..+
T Consensus 70 ge~~APVlTIFIGGNHEAsn---------yL~--eLpyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~ 137 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN---------YLQ--ELPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHF 137 (456)
T ss_pred CcccCceeEEEecCchHHHH---------HHH--hcccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCCC
Confidence 34567899999999999842 322 233321 112345553 67899999988762 233210
Q ss_pred ---------------HHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchh-HHH----------------HHHH
Q 008826 345 ---------------GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREA-ECM----------------RVEM 392 (552)
Q Consensus 345 ---------------~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~-~~~----------------r~~l 392 (552)
-.+++ ...|++. +.|-=|+++|.=+.... .++.. ..+ ...+
T Consensus 138 E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~~ 210 (456)
T KOG2863|consen 138 EWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPAL 210 (456)
T ss_pred CCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChHH
Confidence 11111 1233443 23445777786332221 11111 111 2467
Q ss_pred HHHHHHcCCcEEEEccccC
Q 008826 393 EALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 393 ~~ll~~~~VdlvlsGH~H~ 411 (552)
++||++.+...+|+.|.|.
T Consensus 211 ~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 211 EELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHhCcchhhhhhHhh
Confidence 8899999999999999993
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0069 Score=69.94 Aligned_cols=59 Identities=17% Similarity=0.085 Sum_probs=32.7
Q ss_pred HHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008826 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412 (552)
Q Consensus 349 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 412 (552)
+.+++...+.+......+|++.|.-+.........+ .. -..|..--+||++|.||.|..
T Consensus 296 eaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~E--n~---~~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 296 EAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEE--NV---GYQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCccccccccccc--ch---hhHHhcCCCCCEEEECCCCCc
Confidence 334444444333457789999998764321111111 11 112222248999999999974
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.005 Score=74.71 Aligned_cols=48 Identities=25% Similarity=0.217 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCce
Q 008826 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYE 413 (552)
Q Consensus 361 ~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 413 (552)
.+...+|++.|............ .....+|.++. +||+++.||.|...
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~~-----en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSGA-----EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCCc-----chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 46778999999886543211111 12233455444 89999999999764
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.012 Score=67.93 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=27.8
Q ss_pred CceEEEEEeCCCCCCC-----------------hHHHHHHHHhCCC-CEEEEcCCcccc
Q 008826 197 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEP-DLVLLVGDVTYA 237 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-----------------~~~~l~~l~~~~p-Dfvl~~GDl~Y~ 237 (552)
..++|+..+|+|.... ....++++.+..+ -++|..||++..
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 3689999999997521 1234555554444 488899999953
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0075 Score=54.90 Aligned_cols=38 Identities=26% Similarity=0.252 Sum_probs=24.4
Q ss_pred EEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccC
Q 008826 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.|+++|.|.-+.. +.+ + .......+.++++.+.||.|+
T Consensus 110 ~~~LsHyP~~~~~--~~~----~--~~r~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 110 DVYLSHYPRPGQD--HPG----M--ESRFDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred EEEEEeCCCCCCC--Ccc----h--hhhHHHHhccCCeEEeccccc
Confidence 6899999965432 111 1 111223355799999999998
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0013 Score=65.23 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=42.7
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
+|++++||+|..... .+.++.+... ..|.++++||+++. |.. .. ..+..+++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDr------G~~------------------s~-~v~~~l~~ 55 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDR------GKR------------------SK-DVVNYIFD 55 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCC------CCC------------------hH-HHHHHHHH
Confidence 478999999965322 3345555332 35999999999952 321 00 11222233
Q ss_pred HhhhcCCeEEecCCchhc
Q 008826 276 NLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~ 293 (552)
.+....+++++.||||..
T Consensus 56 ~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 56 LMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred HhhcCCCeEEEECCcHHH
Confidence 223346799999999974
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0018 Score=63.88 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=46.7
Q ss_pred eEEEEEeCCCCCCCh--------------HHHHHHHH----hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 199 KRIAIVGDLGLTYNT--------------TCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 199 ~rfavigD~~~~~~~--------------~~~l~~l~----~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
-+.++++|+|.+... .++++++. +.+||.++++||+.+... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~-----~--------------- 74 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK-----K--------------- 74 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC-----C---------------
Confidence 368899999987421 13444443 468999999999995311 0
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhc
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
...|..+.++++.+ ..+++.++||||..
T Consensus 75 ---~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 75 ---GLEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred ---hHHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 02344455555554 36999999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.001 Score=67.47 Aligned_cols=67 Identities=24% Similarity=0.373 Sum_probs=43.1
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
++++++||+|..... ..+++++. +.+.|.++++||++.. |.. + ....+.+..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdr------Gp~------------------s--~~vl~~l~~ 54 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNR------GPD------------------S--LEVLRFVKS 54 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCC------CcC------------------H--HHHHHHHHh
Confidence 468999999976432 23444442 2468999999999942 321 0 123334443
Q ss_pred hhhcCCeEEecCCchhc
Q 008826 277 LVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~ 293 (552)
+ ..++.+|.||||..
T Consensus 55 l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 55 L--GDSAVTVLGNHDLH 69 (275)
T ss_pred c--CCCeEEEecChhHH
Confidence 3 35689999999984
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.002 Score=63.87 Aligned_cols=68 Identities=22% Similarity=0.344 Sum_probs=42.5
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHH---h-------CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHH
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMS---S-------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 268 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~---~-------~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd 268 (552)
||+++||+|..... .++++++. + .+.|.++++||+++. |.. -.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr------G~~--------------------s~ 55 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR------GPD--------------------SP 55 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC------CCC--------------------HH
Confidence 79999999986432 23444441 1 136899999999942 321 12
Q ss_pred HHHHHHHHhhhcCCeEEecCCchhc
Q 008826 269 YWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 269 ~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
+..+++..+...-.+..+.||||..
T Consensus 56 evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 56 EVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHhhCCcEEEEECCcHHH
Confidence 2334444443344688999999974
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.029 Score=63.85 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=27.6
Q ss_pred CceEEEEEeCCCCCCC-----------------hHHHHHHHHhCCC-CEEEEcCCcccc
Q 008826 197 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEP-DLVLLVGDVTYA 237 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-----------------~~~~l~~l~~~~p-Dfvl~~GDl~Y~ 237 (552)
..++|+..+|+|.... ....++++.+..+ -++|..||++..
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qG 82 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQG 82 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCC
Confidence 3699999999996421 1234555554444 478899999953
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.027 Score=60.24 Aligned_cols=90 Identities=17% Similarity=0.323 Sum_probs=55.7
Q ss_pred CceEEEEEeCCCCCCC------hHHHHHHHHh-----CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHH
Q 008826 197 YPKRIAIVGDLGLTYN------TTCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (552)
Q Consensus 197 ~~~rfavigD~~~~~~------~~~~l~~l~~-----~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~ 265 (552)
..+++++++|.|.+.. +...++.+.- .+...++.+||+++.-+-. .|.. .+..+..-| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiY-pgq~--------~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIY-PGQE--------EELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccc-cCcc--------cccccccch-H
Confidence 3688999999998642 1223444431 2347899999999521110 1111 111122222 3
Q ss_pred HHHHHHHHHHHhhhcCCeEEecCCchhcccc
Q 008826 266 RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA 296 (552)
Q Consensus 266 ~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~ 296 (552)
+++.+.+++..+-..+-+++.|||||.....
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCccccc
Confidence 5667777888777888899999999986543
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.02 Score=57.46 Aligned_cols=192 Identities=15% Similarity=0.216 Sum_probs=96.0
Q ss_pred EEEEeCCCCCCCh------HHHHHHHHh-----------CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 201 IAIVGDLGLTYNT------TCTINHMSS-----------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 201 favigD~~~~~~~------~~~l~~l~~-----------~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
++++||+|.+.+. +..++.|.- .+..-+|++||.+.......+......+ .........
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~---~~~~~~~~~- 77 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARY---LTKKSSAAS- 77 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhc---cccccchhh-
Confidence 7899999987652 122333321 1334799999999542110000000000 000000111
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhcccccC-cch-HHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccc--
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTF-VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI-- 339 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~-~~f-~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~-- 339 (552)
....+.+..++..+.+.+|+...|||||-....-. ..+ ..+..+-....+ -....| -|.|+++|++|++.....
T Consensus 78 ~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~-~~~vtN-P~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 78 VEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYST-LNLVTN-PYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCC-cEEeCC-CeEEEECCEEEEEECCCCHH
Confidence 23456677788888899999999999998644211 111 111100000000 001122 356999999999988742
Q ss_pred ---cCCCcHHHHHHHHHHHhcccCC-CCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 340 ---SYDKSGHQYKWLEKDLANVDRS-VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 340 ---~~~~~~~Q~~WL~~~L~~~~r~-~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
.|.....-++.|++.|+.-.-. .+|=.+ +.|... +. .+++-+.-.+++|+||.|.|+-.
T Consensus 156 Di~ky~~~~~~l~~me~~L~wrHlaPTaPDTL-----~~yP~~-----~~-------Dpfvi~~~PhVyf~Gnq~~f~t~ 218 (257)
T cd07387 156 DILKYSSLESRLDILERTLKWRHIAPTAPDTL-----WCYPFT-----DR-------DPFILEECPHVYFAGNQPKFGTK 218 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHhcccCCCCCCcc-----ccccCC-----CC-------CceeecCCCCEEEeCCCcceeee
Confidence 1333445577788877651000 000000 111100 00 01222345899999999998765
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0046 Score=61.79 Aligned_cols=69 Identities=23% Similarity=0.291 Sum_probs=40.9
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHh---------CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHH
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSS---------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 268 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~---------~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd 268 (552)
+|++++||+|..... .++++++.- ..-|.++++||+++. |.. + .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDR------Gp~------------------S--~ 54 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDR------GPH------------------S--L 54 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCC------CcC------------------h--H
Confidence 378999999976432 223333221 124789999999952 331 0 1
Q ss_pred HHHHHHHHhhhcCCeEEecCCchhc
Q 008826 269 YWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 269 ~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
...+.+..+...-.++++.||||..
T Consensus 55 ~vl~~~~~~~~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 55 RMIEIVWELVEKKAAYYVPGNHCNK 79 (245)
T ss_pred HHHHHHHHHhhCCCEEEEeCccHHH
Confidence 1223333333345789999999963
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.036 Score=62.88 Aligned_cols=46 Identities=26% Similarity=0.189 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCc
Q 008826 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAY 412 (552)
Q Consensus 361 ~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 412 (552)
.....+|++.|............+ . .. ..+.+. +||+++.||+|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~~e--n---~~-~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPGAE--N---SA-YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCccccccc--h---HH-HHHhcCCCCCEEEcCCCCcc
Confidence 456779999998765321111111 1 11 123443 8999999999974
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0075 Score=59.90 Aligned_cols=140 Identities=21% Similarity=0.355 Sum_probs=85.5
Q ss_pred HhhhcCCeEEecCCchhcccccCc-------chHHhhhhcC-------CCCCC-CCCCCcceEEEEcCeEEEEEeccccc
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQ-------TFVAYSSRFA-------FPSEE-SGSLSSFYYSFNAGGIHFIMLGAYIS 340 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~-------~f~~y~~~f~-------~P~~~-~~~~~~~yYsf~~G~v~fI~Ldt~~~ 340 (552)
++...+|+|+-.||||.....-.. ....|.+.+. -|... .-.....-||+++|++|.+-+-+...
T Consensus 166 ~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~G 245 (392)
T COG5555 166 NIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIG 245 (392)
T ss_pred CceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeecc
Confidence 344569999999999997543211 1223322221 11110 11233557999999999988766432
Q ss_pred CCC--cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch----------------hHHHHHHHHHHHHHcCCc
Q 008826 341 YDK--SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE----------------AECMRVEMEALLYSYGVD 402 (552)
Q Consensus 341 ~~~--~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~----------------~~~~r~~l~~ll~~~~Vd 402 (552)
-.. ...-+-||+.+|........| ++++.|.-+-.-....++. ....|.++...++.|+|.
T Consensus 246 d~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvv 324 (392)
T COG5555 246 DAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVV 324 (392)
T ss_pred ccCCCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeE
Confidence 111 223467999999876544444 8888887653321111110 112477888999999999
Q ss_pred EEEEccccCceeee
Q 008826 403 IVFNGHVHAYERSN 416 (552)
Q Consensus 403 lvlsGH~H~yeR~~ 416 (552)
..+.||.|.....+
T Consensus 325 g~fhGhkhd~~may 338 (392)
T COG5555 325 GTFHGHKHDFNMAY 338 (392)
T ss_pred Eeccccccccceee
Confidence 99999999764433
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0082 Score=58.86 Aligned_cols=37 Identities=32% Similarity=0.507 Sum_probs=26.6
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHH-hCCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~-~~~pDfvl~~GDl~Y 236 (552)
|++++||+|..... .++++.+. +.+.|.++++||+++
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 89999999976432 23334433 246899999999995
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.009 Score=58.77 Aligned_cols=66 Identities=18% Similarity=0.300 Sum_probs=40.0
Q ss_pred EEEeCCCCCCCh-HHHHHHHHhC--------CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 202 AIVGDLGLTYNT-TCTINHMSSN--------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 202 avigD~~~~~~~-~~~l~~l~~~--------~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
.++||+|..... .+.++++... ..|.++++||+++. |.. + ....+
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR------Gp~------------------S--~~vl~ 55 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR------GPE------------------I--RELLE 55 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC------CCC------------------H--HHHHH
Confidence 589999986432 2344444211 35899999999942 321 0 12334
Q ss_pred HHHHhhhcCCeEEecCCchhc
Q 008826 273 FMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~ 293 (552)
.+..+...-.++.+.||||..
T Consensus 56 ~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 56 IVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred HHHHhhcCCCEEEEEccCcHH
Confidence 444443334688999999974
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.18 Score=49.50 Aligned_cols=193 Identities=18% Similarity=0.251 Sum_probs=102.5
Q ss_pred eEEEEEeCCCCCCChHHH---HHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNTTCT---INHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 199 ~rfavigD~~~~~~~~~~---l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+|++++||+=....-..+ +..+. +.++||||..|-++- +|.+. .|+.+..++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa------~G~Gi------------------t~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAA------GGFGI------------------TEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCcccc------CCcCC------------------CHHHHHHHH
Confidence 589999998655433332 33344 358999999999882 34321 233344443
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC-CCCCcceEEEEcCeEEEEEec--ccccCCC-cHHHHHH
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-GSLSSFYYSFNAGGIHFIMLG--AYISYDK-SGHQYKW 350 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-~~~~~~yYsf~~G~v~fI~Ld--t~~~~~~-~~~Q~~W 350 (552)
+ +.+- +++.|||=+..... ..|..-..++--|.+-+ +..+..|+-|...+..+.+.+ ....... -..-.+=
T Consensus 57 ~---~G~d-viT~GNH~wd~~ei-~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~ 131 (266)
T COG1692 57 E---AGAD-VITLGNHTWDQKEI-LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKA 131 (266)
T ss_pred H---hCCC-EEecccccccchHH-HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHH
Confidence 3 2344 46799998753210 11111112222333321 233455666777665554444 3322211 2223444
Q ss_pred HHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEE
Q 008826 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (552)
Q Consensus 351 L~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vy 430 (552)
+++.|...+ .+++.+||-+|.=..+. ..+| -++.+-.|.+|+-=|+|.-.- +..+-++|+.|
T Consensus 132 ~d~l~~~~~-~~~~~iiVDFHAEtTSE-----------K~a~-g~yldGrvsavvGTHTHV~Ta-----D~rIL~~GTay 193 (266)
T COG1692 132 ADKLLDEIK-LGTDLIIVDFHAETTSE-----------KNAF-GWYLDGRVSAVVGTHTHVPTA-----DERILPKGTAY 193 (266)
T ss_pred HHHHHHhCc-cCCceEEEEccccchhh-----------hhhh-heEEcCeEEEEEeccCccccc-----cceecCCCcEE
Confidence 566666654 35577999999532221 1111 122344799999999995322 22234689999
Q ss_pred EEE-CCCCC
Q 008826 431 ITI-GDGGN 438 (552)
Q Consensus 431 iv~-G~gG~ 438 (552)
++- |.-|.
T Consensus 194 iTDvGMtG~ 202 (266)
T COG1692 194 ITDVGMTGP 202 (266)
T ss_pred EecCccccc
Confidence 873 55444
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.011 Score=59.46 Aligned_cols=64 Identities=25% Similarity=0.352 Sum_probs=40.8
Q ss_pred EEEeCCCCCCCh-HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhh
Q 008826 202 AIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 279 (552)
Q Consensus 202 avigD~~~~~~~-~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~ 279 (552)
.++||+|..... .++++++.- .+.|.++++||++.. |.. + .+..+++..+.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdR------Gp~------------------s--~evl~~l~~l~- 54 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNR------GPD------------------S--LETLRFVKSLG- 54 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCC------CcC------------------H--HHHHHHHHhcC-
Confidence 589999986432 334455432 357999999999942 321 1 12334444432
Q ss_pred cCCeEEecCCchhc
Q 008826 280 KVPIMVVEGNHEIE 293 (552)
Q Consensus 280 ~iP~~~v~GNHD~~ 293 (552)
..+..+.||||..
T Consensus 55 -~~v~~VlGNHD~~ 67 (257)
T cd07422 55 -DSAKTVLGNHDLH 67 (257)
T ss_pred -CCeEEEcCCchHH
Confidence 4688999999984
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.096 Score=51.95 Aligned_cols=189 Identities=16% Similarity=0.237 Sum_probs=89.5
Q ss_pred EEEeCCCCCCCh---HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 202 AIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 202 avigD~~~~~~~---~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+++||.=....- ...+..+.+ .++||||..|.++- .|... ....+.+++
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa------~G~Gi------------------t~~~~~~L~--- 53 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAA------GGFGI------------------TPKIAEELF--- 53 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTT------TTSS--------------------HHHHHHHH---
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccC------CCCCC------------------CHHHHHHHH---
Confidence 367776433221 223444443 58999999999983 34321 011222222
Q ss_pred hhcCCeEEecCCchhcccccCcchHHhhhh---cCCCCCCC-CCCCcceEEEEcCeEEEEEecc--cccCCCcHHHHHHH
Q 008826 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSR---FAFPSEES-GSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYKWL 351 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~---f~~P~~~~-~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~WL 351 (552)
...+- ..+.|||=+.. +....|... .--|.|-+ +..+..|..++.++.++-++|- +........-+..+
T Consensus 54 ~~GvD-viT~GNH~wdk----kei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~ 128 (253)
T PF13277_consen 54 KAGVD-VITMGNHIWDK----KEIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAA 128 (253)
T ss_dssp HHT-S-EEE--TTTTSS----TTHHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHH
T ss_pred hcCCC-EEecCcccccC----cHHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHH
Confidence 23444 46789998853 222333322 22343322 3456778899999877777664 22222222334445
Q ss_pred HHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEE
Q 008826 352 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431 (552)
Q Consensus 352 ~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyi 431 (552)
++.|++. +.+++.+||=+|.=. .....+| -.+.+-+|.+|+--|+|.- ..+..+-|+|+-||
T Consensus 129 d~~l~~l-~~~~~~iiVDFHAEa-----------TSEK~A~-g~~lDGrvsaV~GTHTHVq-----TaDerILp~GTaYi 190 (253)
T PF13277_consen 129 DRLLEEL-KEETDIIIVDFHAEA-----------TSEKQAM-GWYLDGRVSAVVGTHTHVQ-----TADERILPGGTAYI 190 (253)
T ss_dssp HHHHHH------SEEEEEEE-S------------HHHHHHH-HHHHBTTBSEEEEESSSS------BS--EE-TTS-EEE
T ss_pred HHHHHhc-cccCCEEEEEeecCc-----------HHHHHHH-HHHhCCcEEEEEeCCCCcc-----CchhhccCCCCEEE
Confidence 5555554 246778999988421 1112222 3445668999999999952 12222247899999
Q ss_pred E-ECCCCCcc
Q 008826 432 T-IGDGGNLE 440 (552)
Q Consensus 432 v-~G~gG~~~ 440 (552)
+ +|.-|...
T Consensus 191 TDvGMtG~~d 200 (253)
T PF13277_consen 191 TDVGMTGPYD 200 (253)
T ss_dssp S---EBEESS
T ss_pred ecCccccCcc
Confidence 7 46666643
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.012 Score=57.36 Aligned_cols=65 Identities=17% Similarity=0.230 Sum_probs=39.7
Q ss_pred EEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhh-c
Q 008826 203 IVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS-K 280 (552)
Q Consensus 203 vigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~-~ 280 (552)
++||+|..... ..+++.+.....|.++++||++.. |.. .....+.+..+.. .
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdr------g~~--------------------~~~~l~~l~~~~~~~ 55 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDR------GPD--------------------SVEVIDLLLALKILP 55 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCC------CCC--------------------cHHHHHHHHHhcCCC
Confidence 78999975322 233444444578999999999942 321 0122233333211 4
Q ss_pred CCeEEecCCchhc
Q 008826 281 VPIMVVEGNHEIE 293 (552)
Q Consensus 281 iP~~~v~GNHD~~ 293 (552)
.+++.+.||||..
T Consensus 56 ~~~~~l~GNHe~~ 68 (225)
T cd00144 56 DNVILLRGNHEDM 68 (225)
T ss_pred CcEEEEccCchhh
Confidence 5799999999985
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.036 Score=44.61 Aligned_cols=76 Identities=21% Similarity=0.339 Sum_probs=46.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
+|+.+++.-. ..+++.|+|...... +. ....-.|+|....+.... ..... ++..
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~-~~-------~~~~y~v~~~~~~~~~~~----~~~~~-------------~~~~ 55 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSG-NG-------PITGYRVEYRSVNSTSDW----QEVTV-------------PGNE 55 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSST-SS-------SESEEEEEEEETTSSSEE----EEEEE-------------ETTS
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCC-CC-------CeeEEEEEEEecccceee----eeeee-------------eeee
Confidence 4777777665 479999999997511 11 113456677655443310 11111 1112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
+.++|++|+|+|.|.++|..-+
T Consensus 56 ~~~~i~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 56 TSYTITGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp SEEEEESCCTTSEEEEEEEEEE
T ss_pred eeeeeccCCCCCEEEEEEEEEe
Confidence 3788899999999999998544
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.13 Score=51.00 Aligned_cols=135 Identities=13% Similarity=0.168 Sum_probs=68.4
Q ss_pred HHHHHHhhhcCCeEEecCCchhcccccCcchHHhhh---hcCCCCCCCCCC---CcceEEEEcCeEE--EEEecccccCC
Q 008826 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEESGSL---SSFYYSFNAGGIH--FIMLGAYISYD 342 (552)
Q Consensus 271 ~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~~~~~---~~~yYsf~~G~v~--fI~Ldt~~~~~ 342 (552)
.+.|+. ..+-++.+.+||++... ...+....+ .-.++..+.+.. ...+..++.++++ |+.+.+.....
T Consensus 70 ~~~L~~--~G~d~~tlaNNH~fD~G--~~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~ 145 (239)
T cd07381 70 ADALKA--AGFDVVSLANNHTLDYG--EEGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGI 145 (239)
T ss_pred HHHHHH--hCCCEEEcccccccccc--hHHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCC
Confidence 344444 35666666669998633 222222221 223333222211 1345567777754 55554321110
Q ss_pred ----------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008826 343 ----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412 (552)
Q Consensus 343 ----------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 412 (552)
....-.+-+++.++++++. ...+||..|-...... ........+...+.+.++|+|+.||.|..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~ 219 (239)
T cd07381 146 PLAAGARPGGVNPLDLERIAADIAEAKKK-ADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVL 219 (239)
T ss_pred cCcccCCccccCccCHHHHHHHHHHHhhc-CCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcC
Confidence 0111123455555555433 7789999996432211 11122335555555679999999999976
Q ss_pred eee
Q 008826 413 ERS 415 (552)
Q Consensus 413 eR~ 415 (552)
+-.
T Consensus 220 q~~ 222 (239)
T cd07381 220 QGI 222 (239)
T ss_pred CCe
Confidence 543
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.028 Score=55.28 Aligned_cols=73 Identities=21% Similarity=0.441 Sum_probs=48.4
Q ss_pred eEEEEEeCCCCCCCh--------------H---HHHHHH-HhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 199 KRIAIVGDLGLTYNT--------------T---CTINHM-SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 199 ~rfavigD~~~~~~~--------------~---~~l~~l-~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
-+.++++|+|.+... . ..++++ .+.+|+-+|++||+-.+- +.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~~--------------- 79 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----GK--------------- 79 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----Cc---------------
Confidence 378999999998632 1 123322 357999999999998531 11
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhc
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 293 (552)
.....|+....+++.+... -++++.||||-+
T Consensus 80 -~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~ 110 (235)
T COG1407 80 -SLRQEKEEVREFLELLDER-EVIIIRGNHDNG 110 (235)
T ss_pred -cccccHHHHHHHHHHhccC-cEEEEeccCCCc
Confidence 0123566666666665443 599999999975
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.022 Score=57.69 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=26.7
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHH-hCCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~-~~~pDfvl~~GDl~Y 236 (552)
++.++||+|..... .+.++++. ....|-++++||++.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd 40 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA 40 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC
Confidence 46899999986532 34555554 235789999999994
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.029 Score=57.04 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=25.6
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHhC------CCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSSN------EPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~~------~pDfvl~~GDl~Y 236 (552)
++.++||+|..... ..+++.+.+. ..+.+|++||+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 68999999987532 3344444321 3568999999994
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.27 Score=48.76 Aligned_cols=136 Identities=13% Similarity=0.147 Sum_probs=67.4
Q ss_pred HHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhh---hcCCCCCCCCCC---CcceEEEEcCeEEEEEec--cccc-
Q 008826 270 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEESGSL---SSFYYSFNAGGIHFIMLG--AYIS- 340 (552)
Q Consensus 270 ~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~~~~~---~~~yYsf~~G~v~fI~Ld--t~~~- 340 (552)
..+.|+.+ .+-++.+.+|||+... ...+....+ ...++..+.+.. ...+..++.+++++-++. +...
T Consensus 65 ~~~~l~~~--G~d~~~laNNH~fD~G--~~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~ 140 (239)
T smart00854 65 NAAALKAA--GFDVVSLANNHSLDYG--EEGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNN 140 (239)
T ss_pred HHHHHHHh--CCCEEEeccCcccccc--hHHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCC
Confidence 34445443 5556666669999643 222222222 223333222111 134566778876654443 2110
Q ss_pred -CC-----C-----cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccc
Q 008826 341 -YD-----K-----SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 341 -~~-----~-----~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~ 409 (552)
+. . .....+=+++.+++++. +...+||+.|--...... . . .....+..-+.+.++|+|+.||.
T Consensus 141 ~~~~~~~~~g~~~~~~~~~~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~---p-~-~~~~~~A~~l~~~G~DvIiG~H~ 214 (239)
T smart00854 141 GWAASKDRPGVALLPDLDREKILADIARARK-KADVVIVSLHWGVEYQYE---P-T-DEQRELAHALIDAGADVVIGHHP 214 (239)
T ss_pred CcccCCCCCCeeecCcCCHHHHHHHHHHHhc-cCCEEEEEecCccccCCC---C-C-HHHHHHHHHHHHcCCCEEEcCCC
Confidence 10 0 00012234444444432 478899999976432211 0 1 11234444454579999999999
Q ss_pred cCceee
Q 008826 410 HAYERS 415 (552)
Q Consensus 410 H~yeR~ 415 (552)
|..+..
T Consensus 215 H~~~~~ 220 (239)
T smart00854 215 HVLQPI 220 (239)
T ss_pred CcCCce
Confidence 987644
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.11 Score=56.04 Aligned_cols=42 Identities=31% Similarity=0.454 Sum_probs=32.2
Q ss_pred CceEEEEEeCCCCCCC---------hHHHHHHH----HhCCCCEEEEcCCccccc
Q 008826 197 YPKRIAIVGDLGLTYN---------TTCTINHM----SSNEPDLVLLVGDVTYAN 238 (552)
Q Consensus 197 ~~~rfavigD~~~~~~---------~~~~l~~l----~~~~pDfvl~~GDl~Y~d 238 (552)
..+||++..|.|+++. +..++++| .+++.||||..||+...+
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 3699999999999874 22344443 357999999999999765
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.13 Score=53.20 Aligned_cols=22 Identities=9% Similarity=0.039 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHVH 410 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H 410 (552)
.++..+.+++++.++++=||.=
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~ 243 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHEA 243 (305)
T ss_pred HHHHHHHHHHcCCeEEEEeccc
Confidence 4678899999999999999985
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=93.47 E-value=1.2 Score=44.56 Aligned_cols=129 Identities=12% Similarity=0.152 Sum_probs=72.4
Q ss_pred hcCCeEEecCCchhcccccCcchH---HhhhhcCCCCCCCCC---CCcceEEEEcCeEEEEEecccccC---C-------
Q 008826 279 SKVPIMVVEGNHEIEAQAGNQTFV---AYSSRFAFPSEESGS---LSSFYYSFNAGGIHFIMLGAYISY---D------- 342 (552)
Q Consensus 279 ~~iP~~~v~GNHD~~~~~~~~~f~---~y~~~f~~P~~~~~~---~~~~yYsf~~G~v~fI~Ldt~~~~---~------- 342 (552)
..+-++.+.-||.+... .+.+. ...+...+...+.+. .......++.+++++-++...... .
T Consensus 74 ~G~d~vslANNH~~D~G--~~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~ 151 (250)
T PF09587_consen 74 AGFDVVSLANNHIFDYG--EEGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRP 151 (250)
T ss_pred cCCCEEEecCCCCcccc--HHHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCcccccccc
Confidence 36777888889987532 12221 122222333322211 123345677787666555432110 0
Q ss_pred -------------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccc
Q 008826 343 -------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 343 -------------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~ 409 (552)
....+.+.+++++++++ ++..++||+.|--..... .......++...+-+.|+|+|+.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~-----~p~~~q~~~a~~lidaGaDiIiG~Hp 225 (250)
T PF09587_consen 152 YGFSYRPDKAGLNPNRPGIERIKEDIREAR-KKADVVIVSLHWGIEYEN-----YPTPEQRELARALIDAGADIIIGHHP 225 (250)
T ss_pred ccccccccccccccccchHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC-----CCCHHHHHHHHHHHHcCCCEEEeCCC
Confidence 01234588888888876 567899999996422111 11122345555556689999999999
Q ss_pred cCceee
Q 008826 410 HAYERS 415 (552)
Q Consensus 410 H~yeR~ 415 (552)
|..+-.
T Consensus 226 Hv~q~~ 231 (250)
T PF09587_consen 226 HVIQPV 231 (250)
T ss_pred Ccccce
Confidence 976554
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.17 Score=51.35 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=25.1
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
+++++||+|..... .+.++.+.....+-++++||+++
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 66 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVD 66 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccC
Confidence 68999999976432 22333333345678999999994
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.85 Score=50.21 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=38.1
Q ss_pred cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcE-EEEccccCc
Q 008826 344 SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDI-VFNGHVHAY 412 (552)
Q Consensus 344 ~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~Vdl-vlsGH~H~y 412 (552)
.-.|.+|-.+.++. .+..-+|++.|.|.-.. .+ ....+..+...+ ++++ ||-||.|..
T Consensus 210 ei~~~~~~~~m~~~---~~idlii~lgH~~~~~~-----~e---~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 210 EITQSEWEQDMVNT---TDIDLIIALGHSPVRDD-----DE---WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HHhccchHHHHhhc---cCccEEEEecccccccc-----hh---hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 34678888888877 45566899999886321 11 111444454445 6888 999999953
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.24 Score=51.44 Aligned_cols=23 Identities=13% Similarity=0.192 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.++....+++++.++++=||.-.
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 56788999999999999999853
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.22 Score=50.86 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=20.1
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++.+.++++++++++=||.-.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCccc
Confidence 56888999999999999999853
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.21 Score=51.22 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++.+.+++++.++++=||.-.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCccc
Confidence 46888999999999999999853
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.31 Score=50.26 Aligned_cols=23 Identities=4% Similarity=0.033 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++++.+++.+.++++=||.-.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46888999999999999999853
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.32 Score=50.44 Aligned_cols=23 Identities=13% Similarity=0.238 Sum_probs=20.2
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++...+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 57888999999999999999854
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.45 Score=50.32 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~ 409 (552)
.+.+...|+++++++++=||.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 568889999999999999998
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=89.57 E-value=0.52 Score=48.40 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++...+++++.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46888999999999999999853
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=89.50 E-value=3.4 Score=37.67 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCC
Q 008826 390 VEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 390 ~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
+.+.-|-++.+||+.+.||+|.++... -+|-.||.-|++
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSa 135 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSA 135 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCcc
Confidence 356666778899999999999888774 367788877765
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=88.42 E-value=1.1 Score=46.55 Aligned_cols=21 Identities=10% Similarity=0.230 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~ 409 (552)
.+++...++++++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 468889999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=87.96 E-value=0.92 Score=47.05 Aligned_cols=23 Identities=9% Similarity=0.105 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++.+.+++++.++++-||.-.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 46788999999999999999853
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=87.24 E-value=2.1 Score=50.82 Aligned_cols=97 Identities=20% Similarity=0.295 Sum_probs=52.3
Q ss_pred CCCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccc
Q 008826 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (552)
Q Consensus 71 ~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~ 150 (552)
+++..|++|.|.... +++++|+|.+..... ......-|.....++......+... ..|
T Consensus 614 ~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t----------~ng~itgYkIRy~~~~~~~~~~~t~------v~~----- 671 (1381)
T KOG4221|consen 614 VPSAPPQNLSLEVVS-STSVRVSWLPPPSET----------QNGQITGYKIRYRKLSREDEVNETV------VKG----- 671 (1381)
T ss_pred CCCCCCcceEEEecC-CCeEEEEccCCCccc----------ccceEEEEEEEecccCcccccceee------ccc-----
Confidence 445567778776554 899999998865321 0112223332222111111111110 001
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
+.+.| .+.+|+|+|.|.+||..... +..|++..+.|+-.
T Consensus 672 n~~~~--l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~ 713 (1381)
T KOG4221|consen 672 NTTQY--LFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPES 713 (1381)
T ss_pred chhhh--HhhcCCCCceEEEEEEEeccCCCCCcccceeccCccc
Confidence 01222 34679999999999864332 36788899988643
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=86.52 E-value=4.7 Score=46.18 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=31.2
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
...|+|+||+|||+|-+||..... ...|....|.|.+.
T Consensus 497 ~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 497 TTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred cceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 357899999999999999965432 36888999999886
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=86.31 E-value=5.9 Score=30.84 Aligned_cols=23 Identities=26% Similarity=0.479 Sum_probs=19.1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..++.+.+|.|++.|.++|....
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~~ 78 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAVN 78 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEEC
Confidence 46788899999999999996543
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.46 E-value=13 Score=37.53 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=22.9
Q ss_pred ceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcc
Q 008826 198 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVT 235 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~ 235 (552)
-.||+.++|.|.-... ++. -..-|+.+++||..
T Consensus 61 ~~r~VcisdtH~~~~~---i~~--~p~gDvlihagdfT 93 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD---IND--IPDGDVLIHAGDFT 93 (305)
T ss_pred ceEEEEecCcccccCc---ccc--CCCCceEEeccCCc
Confidence 3699999999954211 111 13468999999998
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=83.47 E-value=1 Score=43.50 Aligned_cols=82 Identities=13% Similarity=0.316 Sum_probs=42.3
Q ss_pred EEEEeCCCCCCCh--HHHHHHH----H-hCCCCEEEEcCCcccccccccC-CCCCCCCcCCCCCCccccccHHHH---HH
Q 008826 201 IAIVGDLGLTYNT--TCTINHM----S-SNEPDLVLLVGDVTYANLYLTN-GTGSDCYSCSFSKTPIHETYQPRW---DY 269 (552)
Q Consensus 201 favigD~~~~~~~--~~~l~~l----~-~~~pDfvl~~GDl~Y~d~~~~~-G~~~~cy~~~~~~~~~~e~y~~~w---d~ 269 (552)
|++++|.+.+.+. .+.++++ . +.+|+.+|++|+++........ +. ....+.... ..
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 67 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGS-------------VPDSYSFEEDFLKE 67 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT----------------HHCCHHHHHHHH
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCcccccccccc-------------ccccccccHHHHHH
Confidence 6889999987432 2233333 3 5679999999999964321100 00 000111111 12
Q ss_pred HHHHHHHhhhcCCeEEecCCchhccc
Q 008826 270 WGRFMQNLVSKVPIMVVEGNHEIEAQ 295 (552)
Q Consensus 270 ~~~~l~~l~~~iP~~~v~GNHD~~~~ 295 (552)
....+..+...++++.+||+||....
T Consensus 68 ~~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 68 LDSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp CHHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHHhhcccccEEEEeCCCcccccc
Confidence 23445555678999999999998643
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=80.24 E-value=9.9 Score=28.51 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=19.4
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
.+...|.+|+|++.|.++|..-.
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~~ 78 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAVN 78 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEEc
Confidence 46788999999999999987543
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 552 | ||||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 4e-57 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 4e-57 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 4e-57 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 1e-55 |
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 552 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-121 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-121 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 3e-39 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 3e-27 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 3e-11 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 1e-09 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 2e-08 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 8e-07 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 6e-06 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 4e-04 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 364 bits (934), Expect = e-121
Identities = 154/497 (30%), Positives = 221/497 (44%), Gaps = 95/497 (19%)
Query: 59 DIPDTDPLVRRRVTGFEPEQLSVSLSFN-HDSIWITWITGEFQIGDNIKPLDPKTVASFV 117
D+P + R P+Q+ ++ ++ I+W+T + + +S V
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMD------------EPGSSAV 49
Query: 118 RYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSI 177
RY + + A G Y NY+SG IHH + L+ N KYYY+ G +
Sbjct: 50 RYWSEKNGRKRIAKGKMSTYRFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLRN- 101
Query: 178 PAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHM--SSNEPDLVLLVGDVT 235
+ + F T P +G P ++GDLG ++++ T++H S + VL VGD++
Sbjct: 102 --TTRRFSFITPPQTGLDV-PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLS 158
Query: 236 YANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE-- 293
YA+ Y + RWD WGRF + V+ P + GNHEIE
Sbjct: 159 YADRYPNH-------------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFA 199
Query: 294 -AQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 352
+ F +S R+ P E S S S F+YS H I+L +Y +Y + QY WL+
Sbjct: 200 PEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLK 259
Query: 353 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412
K+L V RS TPWL+ H P Y+SY+ H+ E E MR + EA Y VD+VF GHVHAY
Sbjct: 260 KELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAY 319
Query: 413 ERSNRVFNYTLD-----------PCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPD 461
ERS RV N PV+ITIGD GN
Sbjct: 320 ERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG--------------------- 358
Query: 462 PYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSN 521
QP+YSAFRE+SFGHG+ ++KN T A ++W+RNQD
Sbjct: 359 ---------------VIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGV 403
Query: 522 NKVGDQIYIVRQPDKCP 538
D ++ +
Sbjct: 404 AVEADSVWFFNRHWYPV 420
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 362 bits (931), Expect = e-121
Identities = 154/496 (31%), Positives = 221/496 (44%), Gaps = 94/496 (18%)
Query: 55 GNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFN-HDSIWITWITGEFQIGDNIKPLDPKTV 113
VD+P + P+Q+ ++ + I+W T + G
Sbjct: 4 AEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAG----------- 52
Query: 114 ASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCG 173
A+ V Y + + A G + Y NYTS IHH + LE + KYYY+ G
Sbjct: 53 ANKVFYWSENSKSQKRAMGTVVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLG 105
Query: 174 DPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLV 231
++F T P GP P ++GD+G T+++ T+ H N + VL +
Sbjct: 106 FGD---AKRQFWFVTPPKPGP-DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFM 161
Query: 232 GDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHE 291
GD++Y+N + + RWD WGRF + V+ P + GNHE
Sbjct: 162 GDLSYSNRWPNH-------------------DNNRWDTWGRFSERSVAYQPWIWTAGNHE 202
Query: 292 IE---AQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 348
I+ Q FV +++R+ P E SGS +Y+ H I+L +Y + K QY
Sbjct: 203 IDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQY 262
Query: 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 408
KW +L V+RS TPWL+ H P Y+SY +HY E E MR E Y VDIVF+GH
Sbjct: 263 KWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGH 322
Query: 409 VHAYERSNRVFNYTLD-----------PCGPVHITIGDGGNLEKMSITHADEPGNCPEPS 457
VH+YERS RV N + PV+ITIGDGGN E ++
Sbjct: 323 VHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLA-------------- 368
Query: 458 STPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRN 517
QP YSAFRE+SFGHGI ++KN T A ++WHRN
Sbjct: 369 ----------------------SEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRN 406
Query: 518 QDSNNKVGDQIYIVRQ 533
QD + D ++++ +
Sbjct: 407 QDGASVEADSLWLLNR 422
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-39
Identities = 53/310 (17%), Positives = 91/310 (29%), Gaps = 64/310 (20%)
Query: 196 SYPKRIAIVGDLGLTYNTTCTINH-----------MSSNEPDLVLLVGDVTYANLYLTNG 244
+ R VGD G N + + D +L +GD Y
Sbjct: 4 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFT------ 57
Query: 245 TGSDCYSCSFSKTPIHETYQPRWD--YWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQT-F 301
+H+ R+ + F + VP V+ GNH+ Q +
Sbjct: 58 -------------GVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAY 104
Query: 302 VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLG-----------------AYISYDKS 344
S R+ FPS F + + ML + +
Sbjct: 105 SKISKRWNFPS--PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALA 162
Query: 345 GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIV 404
Q W++K LA + +++ H P +S + + C+ ++ LL ++ V
Sbjct: 163 RTQLAWIKKQLAA---AKEDYVLVAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAY 217
Query: 405 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYM 464
GH H + D G + G G ++ P + +
Sbjct: 218 LCGHDHNLQY-------LQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 270
Query: 465 GGFCATNFTS 474
GGF T
Sbjct: 271 GGFAYVEITP 280
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-27
Identities = 44/387 (11%), Positives = 87/387 (22%), Gaps = 117/387 (30%)
Query: 198 PKRIAIVGDLGLTYNTTCTI-----NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSC 252
R A +GD G + + ++ G +
Sbjct: 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGV------------- 49
Query: 253 SFSKTPIHETYQPRWDYWGRFMQNLVS---KVPIMVVEGNHEIEAQAGNQ---------- 299
P W + + +P V G + Q
Sbjct: 50 -------KGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIE 102
Query: 300 ----------TFVAYSSRFAFPS---------EESGSLSSFYYSFNAGGIHFIML----- 335
++ P+ S S FI +
Sbjct: 103 KNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVL 162
Query: 336 -GAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 394
+ + L+ L+ + +++ P YSS + R + + +
Sbjct: 163 SSNFPYKKIHEKAWNDLKSQLSVAK-KIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLP 219
Query: 395 LLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCP 454
LL VD+ +GH + E ++ HIT G G + S
Sbjct: 220 LLKDAEVDLYISGHDNNMEV--------IEDNDMAHITCGSGSMSQGKSGM--------- 262
Query: 455 EPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTW 514
+ S F S G + E+ + + +
Sbjct: 263 -------------------------------KNSKSLFFSSDIGFCVHEL-SNNGIVTKF 290
Query: 515 HRNQDSNNKVGDQIYIVRQPDKCPFHG 541
++ +V + + K
Sbjct: 291 VSSKK--GEVIYTHKLNIKKKKTLDKV 315
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 64.4 bits (156), Expect = 3e-11
Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 58/289 (20%)
Query: 173 GDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTT---CTINHMSSNEPDLVL 229
+ S+ +DV+YF +++ K +A L Y+ + + S + D+++
Sbjct: 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLI 97
Query: 230 LVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGN 289
+ GD+T NG + HE + + + + VV GN
Sbjct: 98 ISGDLTN------NGEKTS-----------HEELAKKLTQVEK------NGTQVFVVPGN 134
Query: 290 HEI---------------EAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFN-AGGIHFI 333
H+I F S F + S S Y + + +
Sbjct: 135 HDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194
Query: 334 MLGAYISYDK------------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH 381
ML I + W+++ A ++ + H +
Sbjct: 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQ 254
Query: 382 YREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430
++ L +D +GH+H + + +
Sbjct: 255 KGYTINYNQQVIDALTEGAMDFSLSGHIHT----QNIRSAKSTDGKEIT 299
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 1e-09
Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 43/193 (22%)
Query: 224 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPI 283
PD ++ GD L + G Y+ F L +
Sbjct: 66 RPDAIVFTGD-------LADK-GEP------------AAYRKLRGLVEPFAAQL--GAEL 103
Query: 284 MVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 343
+ V GNH+ + + +E+ S++ G+ I+L +
Sbjct: 104 VWVMGNHD-DRAELRKFL----------LDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHH 152
Query: 344 SGH----QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR--VEMEALLY 397
G Q WL ++LA ++A HPP S +R + +L
Sbjct: 153 HGEIRASQLGWLAEELATPAP--DGTILALHHPPIPSV--LDMAVTVELRDQAALGRVLR 208
Query: 398 SYGVDIVFNGHVH 410
V + GH+H
Sbjct: 209 GTDVRAILAGHLH 221
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 2e-08
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 46/195 (23%)
Query: 224 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS-KVP 282
PD V++ GD + N G E YQ Q L S P
Sbjct: 41 RPDAVVVSGD-------IVN-CGRP------------EEYQ-------VARQILGSLNYP 73
Query: 283 IMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD 342
+ ++ GNH+ +A F+ Y + ++ + + + + + +
Sbjct: 74 LYLIPGNHDDKA-----LFLEYLQPL--CPQLGSDANNMRCAVDDFATRLLFIDSSRAGT 126
Query: 343 KSGH----QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR--VEMEALL 396
G WLE L P + HPP + + + AL+
Sbjct: 127 SKGWLTDETISWLEAQLFEGGD--KPATIFMHHPPLPLG--NAQMDPIACENGHRLLALV 182
Query: 397 YSY-GVDIVFNGHVH 410
+ + +F GH H
Sbjct: 183 ERFPSLTRIFCGHNH 197
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 50.0 bits (118), Expect = 8e-07
Identities = 38/273 (13%), Positives = 64/273 (23%), Gaps = 83/273 (30%)
Query: 215 CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274
+ V+ +GD+ + + M
Sbjct: 42 DAVLQWRRERVQCVVQLGDIIDGH---------------------NRRRDASDRALDTVM 80
Query: 275 QNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSR-----FAFPSEESGSLSSFYYSFNAG 328
L + V + V GNHE + + + S+ G Y A
Sbjct: 81 AELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140
Query: 329 GIHFIMLGAY----------------------------------------------ISYD 342
F++L AY +
Sbjct: 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGG 200
Query: 343 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG-V 401
S Q +WL+ L D L+ + P ++ + ++L S+ V
Sbjct: 201 FSEQQLQWLDAVLTLSDHKQERVLIFSHLPVH--PCAADPICLAWNHEAVLSVLRSHQSV 258
Query: 402 DIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434
GH H D G HIT+
Sbjct: 259 LCFIAGHDHDG-------GRCTDSSGAQHITLE 284
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 6e-06
Identities = 28/227 (12%), Positives = 74/227 (32%), Gaps = 23/227 (10%)
Query: 198 PKRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 256
P+++ + + ++ +PD++++VG++ + ++
Sbjct: 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 64
Query: 257 TPIHETYQPRWDYWGRFMQNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
IHE + +F + + V VV G ++ + + AY + A+P +
Sbjct: 65 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRA--AYEAETAYP---N 119
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQ---------YKWLEKDLANVDRSVTPWL 366
+ ++ G I G ++ + +++ K + + +
Sbjct: 120 IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPR--RLV 177
Query: 367 VATWHPPWYSSY---SSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
+ PP + V ++ S ++ GHV
Sbjct: 178 TIFYTPPIGEFVDRTPEDPKHHGSAVV--NTIIKSLNPEVAIVGHVG 222
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 4e-04
Identities = 25/221 (11%), Positives = 55/221 (24%), Gaps = 45/221 (20%)
Query: 199 KRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 257
+ I + G + D + L+G++ S Y+ F
Sbjct: 6 RYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMP------KAAKSRDYAAFF--- 56
Query: 258 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGS 317
R + +P V G +A A + P
Sbjct: 57 --------------RILSEA--HLPTAYVPGPQ--DAPIWEYLREAANVELVHP---EMR 95
Query: 318 LSSFYYSFNAGGIHFIMLGAYISYDKSGHQY------KWLEKDLANVDRSVTPW--LVAT 369
++F G +G I+ + ++ W+ + + + +
Sbjct: 96 NVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLF 155
Query: 370 WHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
P Y + E+ L+ ++ +V
Sbjct: 156 HTMP-YHKGLNEQGSH-----EVAHLIKTHNPLLVLVAGKG 190
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 552 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.9 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.88 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.8 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.54 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.52 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.46 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.27 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.26 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.26 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.22 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.2 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.2 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.19 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.17 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.03 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.0 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.0 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.97 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.93 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.92 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.92 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.85 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.58 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.51 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.45 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.44 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.38 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.36 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.35 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.34 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.22 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.18 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.13 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.97 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.95 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.91 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.69 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.63 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.94 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.93 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.73 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.62 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.57 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.53 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.53 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.43 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.28 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.25 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.24 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.21 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.11 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.06 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.04 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.02 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.0 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 95.98 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 95.98 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 95.96 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 95.94 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.82 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 95.78 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.75 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.75 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 95.69 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 95.65 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 95.64 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 95.54 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 95.5 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.36 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 95.31 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.26 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 95.19 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.19 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 95.16 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.15 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.11 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 95.02 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.02 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 94.99 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 94.98 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 94.97 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.96 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 94.95 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 94.94 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.9 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 94.87 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.84 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 94.72 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 94.68 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.64 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 94.63 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 94.62 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 94.6 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 94.57 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 94.54 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 94.5 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 94.5 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 94.49 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 94.45 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.45 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 94.43 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 94.38 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 94.33 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 94.28 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 94.25 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 94.16 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 94.13 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 94.13 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 94.09 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 94.08 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 94.08 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 94.05 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 94.03 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 93.79 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 93.79 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 93.77 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 93.76 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 93.75 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 93.73 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 93.58 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 93.45 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 93.42 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 93.31 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 93.16 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 93.06 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 92.94 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 92.85 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 92.83 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 92.74 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 92.66 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 92.61 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 92.47 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 92.46 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 92.39 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 92.39 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 92.37 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 92.31 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 92.21 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 92.14 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 92.07 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 92.0 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 91.9 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 91.48 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 91.42 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 91.42 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 91.31 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 91.04 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 91.03 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 90.8 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 90.7 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 90.65 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 90.51 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 90.48 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 90.37 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 90.12 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 89.66 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 89.11 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 88.97 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 88.54 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 88.3 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 88.02 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 87.58 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 87.36 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 86.93 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 86.86 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 86.74 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 86.07 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 85.48 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 85.22 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 85.17 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 85.15 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 84.86 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 84.6 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 84.59 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 84.19 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 84.16 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 84.03 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 83.05 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 81.55 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-70 Score=582.65 Aligned_cols=400 Identities=39% Similarity=0.701 Sum_probs=340.6
Q ss_pred CCCCCCCCCCcccccCCCCCCceeEEeecCCC-CeEEEEEEcC-CCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEE
Q 008826 56 NAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITG-EFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGH 133 (552)
Q Consensus 56 ~~~~~~~~~p~~~~~~~~~~P~qi~l~~~~~~-~~~~V~W~T~-~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~ 133 (552)
.+.|+|.++|+++.+....+|+||||++++++ ++|+|+|+|. +.. ..++|+||++++.+..++.|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~------------~~~~V~y~~~~~~~~~~~~~~ 72 (426)
T 1xzw_A 5 EDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKA------------GANKVFYWSENSKSQKRAMGT 72 (426)
T ss_dssp HHHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCT------------TTTEEEEEETTCCCCEEEECE
T ss_pred ccccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCCC------------CCCEEEEecCCCCCceEEEEE
Confidence 36799999999999988899999999999986 9999999997 431 467999999988888888888
Q ss_pred EEEeeeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEeCCCCCCCh
Q 008826 134 SLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNT 213 (552)
Q Consensus 134 ~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~~~~~~~~rfavigD~~~~~~~ 213 (552)
...|+.. ++.++++|+|+|+||+|||+|+|||+++ .+|++++|+|+|.++.. .++||+++||+|.....
T Consensus 73 ~~~~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g---~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~ 141 (426)
T 1xzw_A 73 VVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPPKPGPD-VPYVFGLIGDIGQTHDS 141 (426)
T ss_dssp EECCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHH
T ss_pred EEEEEec-------CCcCCEEEEEEECCCCCCCEEEEEECCC---CccceeEEECCCCCCCC-CCeEEEEEEeCCCCCch
Confidence 7666531 3457899999999999999999999973 58999999999986654 48999999999987555
Q ss_pred HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCch
Q 008826 214 TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHE 291 (552)
Q Consensus 214 ~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD 291 (552)
..+++++.+. +|||||++||++|+++... ..+.+|+.|.+.++++.+.+|+|+++||||
T Consensus 142 ~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~-------------------~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD 202 (426)
T 1xzw_A 142 NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPN-------------------HDNNRWDTWGRFSERSVAYQPWIWTAGNHE 202 (426)
T ss_dssp HHHHHHHHHCTTCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEECCCCGGG
T ss_pred HHHHHHHHhCCCCCCEEEeCCChhhcccCCc-------------------ccchHHHHHHHHHHHHHhcCCEEEeccccc
Confidence 6778888876 8999999999999754311 013679999999999988999999999999
Q ss_pred hcccc---cCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhcccCCCCCEEEE
Q 008826 292 IEAQA---GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVA 368 (552)
Q Consensus 292 ~~~~~---~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv 368 (552)
+.... ....|..|.++|.+|.++.+...+.||+|++|+++||+||++.++..+.+|++||+++|+++++++++|+||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 282 (426)
T 1xzw_A 203 IDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIV 282 (426)
T ss_dssp CCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEE
T ss_pred cccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEE
Confidence 97542 134678899999999876666678999999999999999998877778999999999999987778899999
Q ss_pred EcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc-----------cCCCCcEEEEECCCC
Q 008826 369 TWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT-----------LDPCGPVHITIGDGG 437 (552)
Q Consensus 369 ~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~-----------~~~~G~vyiv~G~gG 437 (552)
++|+|+|+....++.+...+|+.|+++|.+++||+||+||+|.|+|+.|+++.+ .+++|++||++|+||
T Consensus 283 ~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG 362 (426)
T 1xzw_A 283 LVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362 (426)
T ss_dssp ECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSC
T ss_pred EeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCc
Confidence 999999987654555556789999999999999999999999999999998765 347899999999999
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEecCCcEEEEEEEe
Q 008826 438 NLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRN 517 (552)
Q Consensus 438 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~ 517 (552)
+.++... .|. ..+|+|++||+.+|||++|+|.|+|++.|+|+++
T Consensus 363 ~~~~~~~--------------------------~~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~ 406 (426)
T 1xzw_A 363 NSEGLAS--------------------------EMT----------QPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRN 406 (426)
T ss_dssp CTTCCCC--------------------------CBC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEET
T ss_pred ccccccc--------------------------ccC----------CCCCCceeEEecCCCeEEEEEEcCCeEEEEEEEC
Confidence 9875421 011 3578999999999999999999999999999999
Q ss_pred cCCCceeeEEEEEEeC
Q 008826 518 QDSNNKVGDQIYIVRQ 533 (552)
Q Consensus 518 ~d~~~~v~D~~~i~k~ 533 (552)
+|+...|.|+|||+|+
T Consensus 407 ~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 407 QDGASVEADSLWLLNR 422 (426)
T ss_dssp TSCTTCCSEEEEEECS
T ss_pred CCCCEEEeEEEEEEec
Confidence 9986569999999997
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-68 Score=568.14 Aligned_cols=397 Identities=39% Similarity=0.703 Sum_probs=332.3
Q ss_pred CCCCCCCcccccCCCCCCceeEEeecCCC-CeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEe
Q 008826 59 DIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVY 137 (552)
Q Consensus 59 ~~~~~~p~~~~~~~~~~P~qi~l~~~~~~-~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y 137 (552)
|+|.++|+++.+.....|+||||++++++ ++|+|+|.|.+.. ..+.|+||++++.+..++.|++..|
T Consensus 2 ~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~------------~~~~V~~~~~~~~~~~~~~g~~~~~ 69 (424)
T 2qfp_A 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP------------GSSAVRYWSEKNGRKRIAKGKMSTY 69 (424)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSC------------CCCCEEEEESSSCCCEEECCEEECC
T ss_pred CCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCC------------CCCEEEEEeCCCCCceEEEEEEEEE
Confidence 78999999988877779999999999875 8999999996531 3578999999988888888887766
Q ss_pred eeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEeCCCCCCChHHHH
Q 008826 138 DQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTI 217 (552)
Q Consensus 138 ~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~~~~~~~~rfavigD~~~~~~~~~~l 217 (552)
+.. ++.++++|+|+|+||+|||+|+|||+.+ .+|++++|+|+|.+++. .++||+++||+|.......++
T Consensus 70 ~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~---~~s~~~~f~T~p~~~~~-~~~~f~~igD~~~~~~~~~~l 138 (424)
T 2qfp_A 70 RFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPPQTGLD-VPYTFGLIGDLGQSFDSNTTL 138 (424)
T ss_dssp BCS-------SCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHHHH
T ss_pred Eec-------CCCCCEEEEEEECCCCCCCEEEEEECCC---CccceEEEECCCCCCCC-CCeEEEEEEeCCCCCChHHHH
Confidence 531 3457899999999999999999999976 47999999999987654 489999999999876555678
Q ss_pred HHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhccc
Q 008826 218 NHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ 295 (552)
Q Consensus 218 ~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~ 295 (552)
+++.+. +|||||++||++|++++... .+.+|+.|.++++++.+.+|+|+++||||+...
T Consensus 139 ~~~~~~~~~~D~vl~~GDl~y~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~ 199 (424)
T 2qfp_A 139 SHYELSPKKGQTVLFVGDLSYADRYPNH-------------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFA 199 (424)
T ss_dssp HHHHTCSSCCCEEEECSCCSCGGGSGGG-------------------CTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCB
T ss_pred HHHHhCCCCCCEEEEcCccccccccccc-------------------cchHHHHHHHHHHHHHhcCCeEeecCCcccccC
Confidence 888775 89999999999997543110 135799999999999889999999999999743
Q ss_pred c---cCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCC
Q 008826 296 A---GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHP 372 (552)
Q Consensus 296 ~---~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~ 372 (552)
. ....|..|..+|.+|..+.....+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+||++|+
T Consensus 200 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~ 279 (424)
T 2qfp_A 200 PEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 279 (424)
T ss_dssp GGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSS
T ss_pred CcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCc
Confidence 2 1235788999999997655556789999999999999999987766667999999999999877778999999999
Q ss_pred CcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc-----------cCCCCcEEEEECCCCCccc
Q 008826 373 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT-----------LDPCGPVHITIGDGGNLEK 441 (552)
Q Consensus 373 P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~-----------~~~~G~vyiv~G~gG~~~~ 441 (552)
|++++...++.+...+|+.|+++|.+++||++|+||+|.|+|+.|+++.. .+++|++||++|+||+.++
T Consensus 280 P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~ 359 (424)
T 2qfp_A 280 PLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGV 359 (424)
T ss_dssp CSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSC
T ss_pred CceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccc
Confidence 99987655555556789999999999999999999999999999886532 2468999999999999875
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEecCCcEEEEEEEecCCC
Q 008826 442 MSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSN 521 (552)
Q Consensus 442 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~ 521 (552)
... .|. .++|+|++||+.+|||++|+|.|+|++.|+|++++||.
T Consensus 360 ~~~--------------------------~~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~ 403 (424)
T 2qfp_A 360 IDS--------------------------NMI----------QPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGV 403 (424)
T ss_dssp CCC--------------------------CBC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCT
T ss_pred cCc--------------------------cCC----------CCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCC
Confidence 421 111 35889999999999999999999999999999999984
Q ss_pred ceeeEEEEEEeC
Q 008826 522 NKVGDQIYIVRQ 533 (552)
Q Consensus 522 ~~v~D~~~i~k~ 533 (552)
-.+.|+|||+|+
T Consensus 404 ~~~~D~~~i~~~ 415 (424)
T 2qfp_A 404 AVEADSVWFFNR 415 (424)
T ss_dssp TCCSEEEEEECT
T ss_pred EEeeeEEEEEec
Confidence 334799999998
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=329.26 Aligned_cols=262 Identities=23% Similarity=0.300 Sum_probs=191.9
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEE
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLL 230 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~~~~~~~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~ 230 (552)
..++|+|.|+||+|+|+|+|||+.++ .+|.+++|||+|.++....++||+++||.+.......++++|.+.+||||||
T Consensus 71 ~~~t~~v~v~gL~P~t~Y~Yr~~~~~--~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlh 148 (527)
T 2yeq_A 71 LAHSVHVEADGLEPNKVYYYRFKTGH--ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFH 148 (527)
T ss_dssp GTTEEEEEECSCCTTCEEEEEEEETT--EECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEE
T ss_pred CceEEEeecCCcCCCCEEEEEEEeCC--CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEe
Confidence 45899999999999999999999875 6899999999998765445899999999987544456788888889999999
Q ss_pred cCCcccccccccCCCCCCCCcCCC-CCCccccccHHHHHHHH--HHHHHhhhcCCeEEecCCchhcccccCc--------
Q 008826 231 VGDVTYANLYLTNGTGSDCYSCSF-SKTPIHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGNQ-------- 299 (552)
Q Consensus 231 ~GDl~Y~d~~~~~G~~~~cy~~~~-~~~~~~e~y~~~wd~~~--~~l~~l~~~iP~~~v~GNHD~~~~~~~~-------- 299 (552)
+||++|++.....+.....-.... .+....+.|+.+|..+. ..++.+.+.+|+|+++||||+.++....
T Consensus 149 lGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~ 228 (527)
T 2yeq_A 149 LGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSV 228 (527)
T ss_dssp CSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCH
T ss_pred cCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCc
Confidence 999999975421110000000000 01112345666666554 3577888899999999999998653221
Q ss_pred -ch-----HHhhhhc-CCCCCC----CCCCCcceEEEEcCe-EEEEEecccccCC----------------------CcH
Q 008826 300 -TF-----VAYSSRF-AFPSEE----SGSLSSFYYSFNAGG-IHFIMLGAYISYD----------------------KSG 345 (552)
Q Consensus 300 -~f-----~~y~~~f-~~P~~~----~~~~~~~yYsf~~G~-v~fI~Ldt~~~~~----------------------~~~ 345 (552)
.| .+++.+| .||... .+.....||+|++|+ ++||+||++.... .+.
T Consensus 229 ~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~ 308 (527)
T 2yeq_A 229 EAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGK 308 (527)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCH
T ss_pred ccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCH
Confidence 01 1233333 244321 123457899999999 9999999964211 368
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCC----------CCCchhHHHHHHHHHHHHHcCCc--EEEEccccCce
Q 008826 346 HQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS----------SHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYE 413 (552)
Q Consensus 346 ~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~----------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~ye 413 (552)
+|++||+++|++ ++++|+||+.|+|++.... ..|......|++|+++|.+++|+ +||+||+|.++
T Consensus 309 ~Q~~WL~~~L~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~ 385 (527)
T 2yeq_A 309 EQEQWLFNNLGS---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASW 385 (527)
T ss_dssp HHHHHHHHHHHH---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEE
T ss_pred HHHHHHHHHHhc---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHh
Confidence 999999999998 4689999999999987532 23444566799999999999984 99999999999
Q ss_pred eeee
Q 008826 414 RSNR 417 (552)
Q Consensus 414 R~~p 417 (552)
++..
T Consensus 386 ~~~~ 389 (527)
T 2yeq_A 386 ASNL 389 (527)
T ss_dssp EEEE
T ss_pred Hhhc
Confidence 9864
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=297.55 Aligned_cols=253 Identities=17% Similarity=0.232 Sum_probs=183.3
Q ss_pred ceEEEEEeCCCCCCChHHH----H-HHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHH-H
Q 008826 198 PKRIAIVGDLGLTYNTTCT----I-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW-G 271 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~----l-~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~-~ 271 (552)
++||+++||+|.+...+.. + +.+.+.+|||||++||++|. +.. +. ..++|... .
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~--~~-----------------~d~~~~~~f~ 62 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVK--GL-----------------NDPAWKNLYE 62 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCC--ST-----------------TCTHHHHHTT
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCC--cC-----------------ccHHHHHHHH
Confidence 6899999999986543332 2 22335799999999999985 210 00 12345432 2
Q ss_pred HHHHHh--hhcCCeEEecCCchhcccccCc-chHH-------------------hhhhcCCCCCCCCCCCcceEEE----
Q 008826 272 RFMQNL--VSKVPIMVVEGNHEIEAQAGNQ-TFVA-------------------YSSRFAFPSEESGSLSSFYYSF---- 325 (552)
Q Consensus 272 ~~l~~l--~~~iP~~~v~GNHD~~~~~~~~-~f~~-------------------y~~~f~~P~~~~~~~~~~yYsf---- 325 (552)
+.++.+ ..++|+++|+||||+..+...+ .+.. ...||.||. .||+|
T Consensus 63 ~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f 134 (342)
T 3tgh_A 63 DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHF 134 (342)
T ss_dssp TTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEE
T ss_pred HHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEe
Confidence 333332 3579999999999997542211 1111 234566664 57765
Q ss_pred Ec---------C----eEEEEEecccccCC----------CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCC
Q 008826 326 NA---------G----GIHFIMLGAYISYD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY 382 (552)
Q Consensus 326 ~~---------G----~v~fI~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~ 382 (552)
.. | .++||+|||..... ...+|++||+++|++ ++|+||++|+|+|++.. +
T Consensus 135 ~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~-~- 207 (342)
T 3tgh_A 135 TVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGY-S- 207 (342)
T ss_dssp EEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSST-T-
T ss_pred eccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCC-C-
Confidence 32 3 49999999963221 135899999999943 47999999999998753 2
Q ss_pred chhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCC
Q 008826 383 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDP 462 (552)
Q Consensus 383 ~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~ 462 (552)
.....+++.|++||++|+|++||+||+|.|+|..+ +|++||++|+||......
T Consensus 208 ~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~------------------- 260 (342)
T 3tgh_A 208 RGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKS------------------- 260 (342)
T ss_dssp CCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCCC-------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEee--------CCcEEEEeCccccccccC-------------------
Confidence 22356789999999999999999999999999964 579999999998753210
Q ss_pred CCCcccccccccCCCCCCcCCCCCCCccceeeCCceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeCCCC
Q 008826 463 YMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDK 536 (552)
Q Consensus 463 ~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~~~~ 536 (552)
...++|++|+...+||.+|+| +++.+.++|+.+.+| +++|+++|.|+...
T Consensus 261 ---------------------~~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~~~~G--~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 261 ---------------------GMKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVSSKKG--EVIYTHKLNIKKKK 310 (342)
T ss_dssp ---------------------SSCCTTEEEEECSSEEEEEEE-ETTEEEEEEEETTTT--EEEEEEEEECCCCS
T ss_pred ---------------------CCCCCcceeecCCCcEEEEEE-ECCEEEEEEEECCCC--cEEEEEEEECCCCc
Confidence 123568899999999999999 678899999986777 99999999998664
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=257.26 Aligned_cols=254 Identities=22% Similarity=0.294 Sum_probs=173.3
Q ss_pred ceEEEEEeCCCCCCC-------h---HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHH
Q 008826 198 PKRIAIVGDLGLTYN-------T---TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 266 (552)
Q Consensus 198 ~~rfavigD~~~~~~-------~---~~~l~~-l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~ 266 (552)
++||+++||+|.... . .+.+.+ +.+.+|||||++||++|.++....+ ..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-------------------~~~ 66 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-------------------DKR 66 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-------------------CTH
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-------------------hHH
Confidence 699999999998742 1 123333 3346899999999999864321111 112
Q ss_pred HHHHHHHHHHh----hh-cCCeEEecCCchhcccccC-cchHHhhhhcCCCCCCCCCCCcceEEEEc------CeEEEEE
Q 008826 267 WDYWGRFMQNL----VS-KVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYSFNA------GGIHFIM 334 (552)
Q Consensus 267 wd~~~~~l~~l----~~-~iP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYsf~~------G~v~fI~ 334 (552)
| .+.++.+ .. .+|+++++||||....... ..|.....+|.+| ..||++++ ++++||+
T Consensus 67 ~---~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~ 135 (313)
T 1ute_A 67 F---QETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFM 135 (313)
T ss_dssp H---HHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEE
T ss_pred H---HHHHHHHcCchhhcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEE
Confidence 2 2333322 13 7999999999998643110 0111112344444 35888888 5999999
Q ss_pred ecccccC-----------------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHH
Q 008826 335 LGAYISY-----------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLY 397 (552)
Q Consensus 335 Ldt~~~~-----------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~ 397 (552)
||+.... ..+.+|++||+++|++.. .+|+|+++|+|++..... .....+++.|.++|.
T Consensus 136 lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~ 210 (313)
T 1ute_A 136 LDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLT 210 (313)
T ss_dssp CCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHH
T ss_pred EEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHH
Confidence 9986411 125799999999999863 479999999999876432 123456789999999
Q ss_pred HcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCC
Q 008826 398 SYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPA 477 (552)
Q Consensus 398 ~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~ 477 (552)
+++|+++|+||+|.+++..+ .+|+.||++|++|....... +.+ .
T Consensus 211 ~~~v~~~l~GH~H~~~~~~~-------~~g~~~i~~gs~~~~~~~~~-~~~----------------------~------ 254 (313)
T 1ute_A 211 THKVTAYLCGHDHNLQYLQD-------ENGLGFVLSGAGNFMDPSKK-HLR----------------------K------ 254 (313)
T ss_dssp HTTCSEEEECSSSSEEEEEC-------TTCCEEEEECBSSCCCCCCT-TGG----------------------G------
T ss_pred HcCCcEEEECChhhhhhccC-------CCCceEEEECCCcCcCcccc-ccc----------------------c------
Confidence 99999999999999998863 46899999999986432110 000 0
Q ss_pred CCCcCCCCCCCccceee----CCceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeC
Q 008826 478 AGKFCWDRQPDYSAFRE----SSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQ 533 (552)
Q Consensus 478 ~~~~~~~~~p~~sa~~~----~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~ 533 (552)
..+.+..|.. ..+||++|+| +++.+.++|+.. ++ +++|+++|.|.
T Consensus 255 -------~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g--~~~~~~~l~~~ 303 (313)
T 1ute_A 255 -------VPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SG--KSLFKTKLPRR 303 (313)
T ss_dssp -------SCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TS--CEEEEEEECCC
T ss_pred -------CCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CC--cEEEEEEeccc
Confidence 0012333432 2389999999 677899999976 55 89999999886
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=207.65 Aligned_cols=196 Identities=15% Similarity=0.184 Sum_probs=136.4
Q ss_pred CceEEEEEeCCCCCCC-------------hHHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccc
Q 008826 197 YPKRIAIVGDLGLTYN-------------TTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 261 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-------------~~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e 261 (552)
.++||+++||+|.... ..++++.+.+ .++|+||++||+++. |.
T Consensus 24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~------~~---------------- 81 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK------GE---------------- 81 (330)
T ss_dssp CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT------CC----------------
T ss_pred CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC----------------
Confidence 4799999999997421 2345666666 799999999999952 22
Q ss_pred ccHHHHHHHHHHHHHhh--hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccc
Q 008826 262 TYQPRWDYWGRFMQNLV--SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI 339 (552)
Q Consensus 262 ~y~~~wd~~~~~l~~l~--~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~ 339 (552)
...|..+.+.++++. .++|+++++||||+.. .+ ...+.-. .......+|++++++++||+||+..
T Consensus 82 --~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~~-----~~---~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~ 148 (330)
T 3ib7_A 82 --PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRA-----EL---RKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSV 148 (330)
T ss_dssp --HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCHH-----HH---HHHHHCC---CCCCSCCCEEEEETTEEEEECCCCC
T ss_pred --HHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCHH-----HH---HHHhccc---ccccCCcceEEEeCCEEEEEecCCC
Confidence 235566667777663 3799999999999742 12 2222111 0123467899999999999999864
Q ss_pred c----CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 008826 340 S----YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (552)
Q Consensus 340 ~----~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 414 (552)
. .....+|++||++.|+..... + +|+++|+|++......... ....++.+.+++.+++|+++|+||+|....
T Consensus 149 ~~~~~~~~~~~q~~wl~~~l~~~~~~--~-~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~ 225 (330)
T 3ib7_A 149 PGHHHGEIRASQLGWLAEELATPAPD--G-TILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 225 (330)
T ss_dssp TTCCSBCCCHHHHHHHHHHTTSCCTT--C-EEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred CCCCCCccCHHHHHHHHHHHHhcccC--C-eEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCccc
Confidence 2 234789999999999986432 2 5666777766543211110 012256888999999999999999998875
Q ss_pred eeeccccccCCCCcEEEEECCCCC
Q 008826 415 SNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 415 ~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
.. -+|+.+++.|+.+.
T Consensus 226 ~~--------~~g~~~~~~gs~~~ 241 (330)
T 3ib7_A 226 AT--------FVGIPVSVASATCY 241 (330)
T ss_dssp EE--------ETTEEEEECCCSSC
T ss_pred ce--------ECCEEEEecCccee
Confidence 53 25788888888775
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=198.78 Aligned_cols=205 Identities=19% Similarity=0.166 Sum_probs=134.4
Q ss_pred ceEEEEEeCCCCCCC--------------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCC
Q 008826 198 PKRIAIVGDLGLTYN--------------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 257 (552)
Q Consensus 198 ~~rfavigD~~~~~~--------------------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~ 257 (552)
++||+++||+|.... ..++++.+.+.+||+||++||+++.....
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~---------------- 68 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR---------------- 68 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH----------------
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCc----------------
Confidence 699999999998752 12345555567999999999999632100
Q ss_pred ccccccHHHHHHHHHHHHHhh-hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCC--------CCCCCcceEEEEc-
Q 008826 258 PIHETYQPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE--------SGSLSSFYYSFNA- 327 (552)
Q Consensus 258 ~~~e~y~~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~--------~~~~~~~yYsf~~- 327 (552)
....++.+..+++.+. ..+|+++++||||..... ...+...+..+... ....+..||+|+.
T Consensus 69 -----~~~~~~~~~~~~~~l~~~~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 139 (322)
T 2nxf_A 69 -----RDASDRALDTVMAELDACSVDVHHVWGNHEFYNFS----RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPA 139 (322)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCSEEEECCCHHHHHHCC----HHHHHTSTTCCCC------CEECGGGTCCCEEEEEE
T ss_pred -----chHHHHHHHHHHHHHHhcCCcEEEecCCCCcccCC----HHHHhhhhCCcccccccccccccCCCCceEEEEecC
Confidence 0011333333443332 368999999999995211 12333333311000 0002357899998
Q ss_pred CeEEEEEeccccc----------------------------------------------CCCcHHHHHHHHHHHhcccCC
Q 008826 328 GGIHFIMLGAYIS----------------------------------------------YDKSGHQYKWLEKDLANVDRS 361 (552)
Q Consensus 328 G~v~fI~Ldt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~r~ 361 (552)
++++||+||+... .....+|++||+++|++..+.
T Consensus 140 ~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~ 219 (322)
T 2nxf_A 140 PNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK 219 (322)
T ss_dssp TTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc
Confidence 9999999998641 112489999999999986432
Q ss_pred CCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeeccccccCCCCcEEEEECCC
Q 008826 362 VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 362 ~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
..++||++|+|++....... .....++.+.++|.++ +|+++|+||+|.+++.. +.+|+.|+++|+.
T Consensus 220 -~~~~iv~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~-------~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 220 -QERVLIFSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEGV 286 (322)
T ss_dssp -TCEEEEEESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCCG
T ss_pred -CCcEEEEEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee-------ccCCceEEEecch
Confidence 34688999999987543210 0011256888999999 79999999999998874 2357888877665
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-21 Score=192.73 Aligned_cols=179 Identities=16% Similarity=0.225 Sum_probs=123.6
Q ss_pred eEEEEEeCCCCCC---------C----hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 199 KRIAIVGDLGLTY---------N----TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 199 ~rfavigD~~~~~---------~----~~~~l~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
+||+++||+|... . ..++++.+.+. ++|+||++||+++. |.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 56 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC------GR------------------ 56 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS------CC------------------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC------------------
Confidence 5899999999874 1 23445555554 68999999999952 22
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhc-CCCCCCCCCC-CcceEEEEcCeEEEEEeccccc-
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF-AFPSEESGSL-SSFYYSFNAGGIHFIMLGAYIS- 340 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f-~~P~~~~~~~-~~~yYsf~~G~v~fI~Ldt~~~- 340 (552)
...|+.+.+.++.+ ++|+++++||||..... ...+...| ..+. . +..+|+++.++++||+||+...
T Consensus 57 ~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~ld~~~~~ 125 (274)
T 3d03_A 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKALF----LEYLQPLCPQLGS-----DANNMRCAVDDFATRLLFIDSSRAG 125 (274)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHHHH----HHHHGGGSGGGCS-----CGGGCCEEECSSSSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCCCCCHHHH----HHHhhhhhcCccc-----CCCceEEEEEeCCEEEEEEeCCCCC
Confidence 23455566666655 68999999999985221 01121111 1111 1 3468999999999999998643
Q ss_pred ---CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceee
Q 008826 341 ---YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERS 415 (552)
Q Consensus 341 ---~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~ 415 (552)
.....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|..+..
T Consensus 126 ~~~~~~~~~~~~wl~~~l~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (274)
T 3d03_A 126 TSKGWLTDETISWLEAQLFEGG---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (274)
T ss_dssp CSSBCCCHHHHHHHHHHHHHHT---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred CCCCeeCHHHHHHHHHHHHhCC---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhh
Confidence 2347899999999999852 3468999999987653221111 011246788999999 8999999999998765
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-18 Score=183.70 Aligned_cols=194 Identities=15% Similarity=0.235 Sum_probs=125.6
Q ss_pred CceEEEEEeCCCCCCC-----------------------hH----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCC
Q 008826 197 YPKRIAIVGDLGLTYN-----------------------TT----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDC 249 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-----------------------~~----~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c 249 (552)
.++||++++|+|.... .. .+++.+.+.+||+||++||+++. |.
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~---- 107 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN------GE---- 107 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS------CC----
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC----
Confidence 3799999999998532 12 23444556789999999999952 22
Q ss_pred CcCCCCCCccccccHHHHHHHHHHHHHhh-hcCCeEEecCCchhcccccC------------cchHHhhhhcCCCCCC-C
Q 008826 250 YSCSFSKTPIHETYQPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGN------------QTFVAYSSRFAFPSEE-S 315 (552)
Q Consensus 250 y~~~~~~~~~~e~y~~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~------------~~f~~y~~~f~~P~~~-~ 315 (552)
...++.+.+.++.+. ..+|+++++||||+...... .....|...|.-.... .
T Consensus 108 --------------~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (443)
T 2xmo_A 108 --------------KTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDA 173 (443)
T ss_dssp --------------HHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTC
T ss_pred --------------HHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhh
Confidence 123455566666663 37899999999998642110 0123344444311100 0
Q ss_pred ---CCCCcceEEEEcCeEEEEEeccccc------------CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCC
Q 008826 316 ---GSLSSFYYSFNAGGIHFIMLGAYIS------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSS 380 (552)
Q Consensus 316 ---~~~~~~yYsf~~G~v~fI~Ldt~~~------------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~ 380 (552)
......|+.+..++++||+||+... .....+|++||++.|+++... ...+|+++|+|++.....
T Consensus 174 ~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~~~~~~~ 252 (443)
T 2xmo_A 174 ISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNLTDHNDV 252 (443)
T ss_dssp SEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBSSCSSCC
T ss_pred hccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCCcccccc
Confidence 0012334455688999999998642 234689999999999987532 245788999998764321
Q ss_pred CCch-hHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 381 HYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 381 ~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
.... ....++.+.+++.+++|+++|+||+|.....
T Consensus 253 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 253 IQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp --CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEE
T ss_pred cccccccccHHHHHHHHHHcCCeEEEECCcccCchh
Confidence 1100 0113568889999999999999999987664
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.3e-14 Score=138.99 Aligned_cols=216 Identities=13% Similarity=0.232 Sum_probs=110.3
Q ss_pred ceEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCC-cCCC-CCCccccccHHH----HHHH
Q 008826 198 PKRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCY-SCSF-SKTPIHETYQPR----WDYW 270 (552)
Q Consensus 198 ~~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy-~~~~-~~~~~~e~y~~~----wd~~ 270 (552)
++||+++||+|.... ..+.++.+.+.++|+||++||++... .....+ ...+ ...|..+.++.. .+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 78 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNE------ALEKEYERAHLARREPNRKVIHENEHYIIETL 78 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCH------HHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCcc------CcchhhhhhhhhhcccchhhhhHHHHHHHHHH
Confidence 589999999998754 34556666667999999999999521 100000 0000 000000111110 0224
Q ss_pred HHHHHHhhh-cCCeEEecCCchhcccccCcchHHhhhhcC-CCCCCCCCCCcceEEEEcCeEEEEEecccccC-CCcHHH
Q 008826 271 GRFMQNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-DKSGHQ 347 (552)
Q Consensus 271 ~~~l~~l~~-~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~-~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~-~~~~~Q 347 (552)
.++++.+.. .+|+++++||||..... .+........ .|.- ....+ ...+++++++|+.++..... ....+|
T Consensus 79 ~~~l~~l~~~~~pv~~v~GNHD~~~~~---~~~~~~~~~~~~~~~--~~l~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~ 152 (260)
T 2yvt_A 79 DKFFREIGELGVKTFVVPGKNDAPLKI---FLRAAYEAETAYPNI--RVLHE-GFAGWRGEFEVIGFGGLLTEHEFEEDF 152 (260)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSCCHHH---HHHHHHHTTTTCTTE--EECSS-EEEEETTTEEEEEECSEEESSCCBSSS
T ss_pred HHHHHHHHhcCCcEEEEcCCCCchhhh---hHHHHhhhccCCcce--EEecC-cceEEECCEEEEecCCCcCCCCcCHHH
Confidence 445555543 68999999999985210 0011111110 0000 00011 12378899999999853211 111222
Q ss_pred HH----HHH----HHHhcccCCCCCEEEEEcCCCcccCCCCCC--chhHHHHHHHHHHHHHcCCcEEEEccccCceeeee
Q 008826 348 YK----WLE----KDLANVDRSVTPWLVATWHPPWYSSYSSHY--REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 417 (552)
Q Consensus 348 ~~----WL~----~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~--~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~p 417 (552)
+. |+. +.|++.. . ...|++.|+|++....... .......+.+.+++.+++++++++||+| .....
T Consensus 153 ~~~~~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~- 227 (260)
T 2yvt_A 153 VLKYPRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHEL- 227 (260)
T ss_dssp SCEEEHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEE-
T ss_pred HhhcchhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEE-
Confidence 22 433 3344332 2 2358888888764311110 0000012456778888999999999999 32221
Q ss_pred ccccccCCCCcEEEEECCCC
Q 008826 418 VFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 418 v~n~~~~~~G~vyiv~G~gG 437 (552)
-++++++..|+.+
T Consensus 228 -------~~~~~~in~Gs~~ 240 (260)
T 2yvt_A 228 -------VGNTIVVNPGEFE 240 (260)
T ss_dssp -------ETTEEEEECCBGG
T ss_pred -------eCCEEEEeCCCCC
Confidence 1356666666654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.52 E-value=5.5e-14 Score=135.58 Aligned_cols=188 Identities=11% Similarity=0.044 Sum_probs=106.0
Q ss_pred ceEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
++||+++||+|..... ...++.+.+.++|+||++||+++. +.. ...+..+.+.++.
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~------~~~-----------------~~~~~~~~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 5899999999986432 233444445589999999999942 210 1222333333333
Q ss_pred hhhcCCeEEecCCchhcccccCcchHHhhhhc----CCCCCCCCCCCcceEEEEcC-eEEEEEecccc--cCCCcHH---
Q 008826 277 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF----AFPSEESGSLSSFYYSFNAG-GIHFIMLGAYI--SYDKSGH--- 346 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f----~~P~~~~~~~~~~yYsf~~G-~v~fI~Ldt~~--~~~~~~~--- 346 (552)
..+|+++++||||.... ..+...+ ..|... ...+. .+.++ +++|+.++... .+....+
T Consensus 62 --~~~pv~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 129 (228)
T 1uf3_A 62 --AHLPTAYVPGPQDAPIW------EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEAL 129 (228)
T ss_dssp --GCSCEEEECCTTSCSHH------HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSC
T ss_pred --cCCcEEEECCCCCchhH------HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcc
Confidence 26899999999998531 1111111 011100 00111 24455 88999887532 1111222
Q ss_pred -----HHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccc
Q 008826 347 -----QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNY 421 (552)
Q Consensus 347 -----Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~ 421 (552)
+.+|+++.|++.. ..+.|++.|+|++....... . ...+.+++.+++++++++||+|.....
T Consensus 130 ~~~~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~GH~H~~~~~------ 195 (228)
T 1uf3_A 130 RYPAWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQ-G----SHEVAHLIKTHNPLLVLVAGKGQKHEM------ 195 (228)
T ss_dssp EEEHHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTT-S----BHHHHHHHHHHCCSEEEECCSSCEEEE------
T ss_pred cchhhhHHHHHHHHHhCC---CCCeEEEEccCcccCCcccc-C----HHHHHHHHHHhCCCEEEEcccccCccc------
Confidence 2344455555543 12578888998876411111 1 135667888899999999999932211
Q ss_pred ccCCCCcEEEEECCCC
Q 008826 422 TLDPCGPVHITIGDGG 437 (552)
Q Consensus 422 ~~~~~G~vyiv~G~gG 437 (552)
.++++++..|+.+
T Consensus 196 ---~~~~~~in~Gs~~ 208 (228)
T 1uf3_A 196 ---LGASWVVVPGDLS 208 (228)
T ss_dssp ---ETTEEEEECCBGG
T ss_pred ---cCCceEEEecccC
Confidence 1356666666644
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.46 E-value=3.1e-13 Score=139.43 Aligned_cols=188 Identities=14% Similarity=0.111 Sum_probs=99.6
Q ss_pred ceEEEEEeCCCCC----CC-------------hHHHHHHHHhCCCCEEEEcCC-cccccccccCCCCCCCCcCCCCCCcc
Q 008826 198 PKRIAIVGDLGLT----YN-------------TTCTINHMSSNEPDLVLLVGD-VTYANLYLTNGTGSDCYSCSFSKTPI 259 (552)
Q Consensus 198 ~~rfavigD~~~~----~~-------------~~~~l~~l~~~~pDfvl~~GD-l~Y~d~~~~~G~~~~cy~~~~~~~~~ 259 (552)
.+||+++||+|++ .. ...+++.+.+.+||+||++|| +++. +.. .
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~------~~~------------~ 79 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR------NNP------------S 79 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCS------SCC------------C
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCC------CCC------------C
Confidence 7999999999976 21 123444455679999999999 6631 110 0
Q ss_pred ccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcC----CCCCCCCCCCcceEEEEcCeEEEEEe
Q 008826 260 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEESGSLSSFYYSFNAGGIHFIML 335 (552)
Q Consensus 260 ~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~~~~~~~~yYsf~~G~v~fI~L 335 (552)
......+.++++.+...+|+++++||||... ...+..+..... +-.+.. ....+.++.+++.|+.+
T Consensus 80 ----~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~---~~~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~gl 149 (336)
T 2q8u_A 80 ----VVALHDLLDYLKRMMRTAPVVVLPGNHDWKG---LKLFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPF 149 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHSCEEECCC---------CHHHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHhcCCEEEECCCCCccc---cccHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEEC
Confidence 1123445666666643489999999999864 122222222111 111100 00011223467888888
Q ss_pred cccccC-------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHH-HHHHHHHHHHcCCcEEEEc
Q 008826 336 GAYISY-------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECM-RVEMEALLYSYGVDIVFNG 407 (552)
Q Consensus 336 dt~~~~-------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~-r~~l~~ll~~~~VdlvlsG 407 (552)
+..... ....+|++|+.+.|...-+....+.|++.|.|.+...... .+ ... ...+...+.+.++|++++|
T Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~-~~~~~~~v~~~l~~~~~d~v~~G 227 (336)
T 2q8u_A 150 PYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GI-EQGREIIINRALIPSVVDYAALG 227 (336)
T ss_dssp CCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEE
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-Cc-cchhhcccCHHHccccCCEEEEc
Confidence 643211 1134688999888865310123578999999987532110 00 000 0001112334689999999
Q ss_pred cccCceee
Q 008826 408 HVHAYERS 415 (552)
Q Consensus 408 H~H~yeR~ 415 (552)
|+|..+..
T Consensus 228 H~H~~~~~ 235 (336)
T 2q8u_A 228 HIHSFREI 235 (336)
T ss_dssp SCSSCEEE
T ss_pred cccCceEe
Confidence 99988765
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.27 E-value=4.2e-10 Score=106.55 Aligned_cols=134 Identities=15% Similarity=0.278 Sum_probs=83.2
Q ss_pred ceEEEEEeCCCCCCC---hHHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN---TTCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (552)
Q Consensus 198 ~~rfavigD~~~~~~---~~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~ 273 (552)
-+||+++||+|.... ..+.+.++. +.++|+|+++||++.. ...+.
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~-------------------------------~~~~~ 58 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK-------------------------------ESYDY 58 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH-------------------------------HHHHH
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH-------------------------------HHHHH
Confidence 379999999997532 223344333 4579999999999821 12233
Q ss_pred HHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHH
Q 008826 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEK 353 (552)
Q Consensus 274 l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~ 353 (552)
++.+ ..|+++|+||||... .+|. ...++.
T Consensus 59 l~~~--~~~~~~v~GNhD~~~--------------~lp~---------~~~~~~-------------------------- 87 (192)
T 1z2w_A 59 LKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTV-------------------------- 87 (192)
T ss_dssp HHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEE--------------------------
T ss_pred HHhc--CCCEEEEcCCcCccc--------------cCCc---------ceEEEE--------------------------
Confidence 4433 358999999999742 1221 111111
Q ss_pred HHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEE
Q 008826 354 DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITI 433 (552)
Q Consensus 354 ~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~ 433 (552)
..+.|++.|.+.+.... . .+.+..++.+.++|++++||+|...... .+|+.++..
T Consensus 88 ---------~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inp 142 (192)
T 1z2w_A 88 ---------GQFKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINP 142 (192)
T ss_dssp ---------TTEEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEEC
T ss_pred ---------CCEEEEEECCCcCCCCC----C----HHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEEC
Confidence 12467778854443211 1 2356667777899999999999765332 257888888
Q ss_pred CCCCC
Q 008826 434 GDGGN 438 (552)
Q Consensus 434 G~gG~ 438 (552)
|+.+.
T Consensus 143 GS~~~ 147 (192)
T 1z2w_A 143 GSATG 147 (192)
T ss_dssp CCTTC
T ss_pred Ccccc
Confidence 87654
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=121.17 Aligned_cols=186 Identities=9% Similarity=0.024 Sum_probs=100.9
Q ss_pred eEEEEEeCCCCCCC-hHHHHHHHH---hC--CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYN-TTCTINHMS---SN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 199 ~rfavigD~~~~~~-~~~~l~~l~---~~--~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
+||+++||+|.... ..+.++.+. +. ++|+|+++||++.. |.. . ....+
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~------g~~------------------~--~~~~~ 55 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY------------------P--KEVIE 55 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC------------------H--HHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCC------CCC------------------H--HHHHH
Confidence 58999999997532 234556665 55 79999999999942 210 0 12334
Q ss_pred HHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecc--cccCCCcHHHHHH
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYKW 350 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~W 350 (552)
.+..+....|+++++||||..... +...+. .. .. ...++.... .... ........+|++|
T Consensus 56 ~l~~l~~~~~~~~v~GNhD~~~~~-------~~~~~~-~~------~~-~~~~~~~~~---~~~~~~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 56 VIKDLTKKENVKIIRGKYDQIIAM-------SDPHAT-DP------GY-IDKLELPGH---VKKALKFTWEKLGHEGREY 117 (252)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHHH-------SCTTCS-SS------GG-GGGSSCCHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHhhcCeeEEecchHHHhhc-------cccccC-Cc------cc-ccchhhhHH---HHHHHHHHHHHCCHHHHHH
Confidence 445544346899999999975211 000000 00 00 000000000 0000 0001124678899
Q ss_pred HHHHHhcccCCCCCEEEEEcCCCcccCC-CCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeeccccccCCCCc
Q 008826 351 LEKDLANVDRSVTPWLVATWHPPWYSSY-SSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGP 428 (552)
Q Consensus 351 L~~~L~~~~r~~~~w~Iv~~H~P~y~s~-~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~ 428 (552)
|++.............|++.|.+++... ...... ...+.+..++.++ +++++++||+|...... -+|+
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~ 187 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE--QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYG 187 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS--CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTE
T ss_pred HHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCC--CCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCe
Confidence 8764332211111235666776653221 111111 1124677788888 99999999999865442 2478
Q ss_pred EEEEECCCCC
Q 008826 429 VHITIGDGGN 438 (552)
Q Consensus 429 vyiv~G~gG~ 438 (552)
++|..|+.|.
T Consensus 188 ~~in~Gs~~~ 197 (252)
T 1nnw_A 188 RVVCPGSVGF 197 (252)
T ss_dssp EEEEECCSSS
T ss_pred EEEECCCccC
Confidence 8899998775
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-10 Score=111.92 Aligned_cols=143 Identities=16% Similarity=0.324 Sum_probs=84.8
Q ss_pred ceEEEEEeCCCCCCC---hHHHHHHH-HhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN---TTCTINHM-SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (552)
Q Consensus 198 ~~rfavigD~~~~~~---~~~~l~~l-~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~ 273 (552)
.+||+++||+|.... ..+.+.++ .+.++|+|+++||++.. ...+.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~-------------------------------~~l~~ 73 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEM 73 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHH
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH-------------------------------HHHHH
Confidence 479999999998642 22344444 35689999999999831 12333
Q ss_pred HHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHH
Q 008826 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEK 353 (552)
Q Consensus 274 l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~ 353 (552)
++.+ ..|+++|+||||....... ..+.. .+| ....+
T Consensus 74 l~~~--~~~v~~V~GNHD~~~~~~~---~~~~~--~lp---------~~~~~---------------------------- 109 (215)
T 2a22_A 74 LKNI--TKNVYIVSGDLDSAIFNPD---PESNG--VFP---------EYVVV---------------------------- 109 (215)
T ss_dssp HHHH--CSCEEECCCTTCCSCCBCC---GGGTB--CCC---------SEEEE----------------------------
T ss_pred HHHc--CCCEEEecCCCcCcccccC---hhhHh--hCC---------ceEEE----------------------------
Confidence 4443 4689999999997532100 00000 000 00000
Q ss_pred HHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEE
Q 008826 354 DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITI 433 (552)
Q Consensus 354 ~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~ 433 (552)
+ ...+.|++.|.+.+.... . .+.+..++.+.++|++++||+|...... .+|+.++..
T Consensus 110 ---~----~~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inp 166 (215)
T 2a22_A 110 ---Q----IGEFKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNP 166 (215)
T ss_dssp ---E----ETTEEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEEC
T ss_pred ---e----cCCeEEEEEcCCccCCCC----C----HHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEEC
Confidence 0 012467888854433211 1 2356677777899999999999764331 247788888
Q ss_pred CCCCC
Q 008826 434 GDGGN 438 (552)
Q Consensus 434 G~gG~ 438 (552)
|+.+.
T Consensus 167 GS~~~ 171 (215)
T 2a22_A 167 GTATG 171 (215)
T ss_dssp CCSSC
T ss_pred Ccccc
Confidence 87654
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-10 Score=122.63 Aligned_cols=174 Identities=17% Similarity=0.135 Sum_probs=95.2
Q ss_pred ceEEEEEeCCCCCCC--------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 198 PKRIAIVGDLGLTYN--------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 198 ~~rfavigD~~~~~~--------------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
++||+++||+|.+.. ...+++.+.+.+||+||++||++.. +. +.
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~------~~------------p~---- 77 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFND------LR------------PP---- 77 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSS------SS------------CC----
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CC----
Confidence 699999999998742 1234555556899999999999842 11 00
Q ss_pred HHHHHHHHHHHHHhhh-cCCeEEecCCchhcccccCc-chHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC
Q 008826 264 QPRWDYWGRFMQNLVS-KVPIMVVEGNHEIEAQAGNQ-TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY 341 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~-~iP~~~v~GNHD~~~~~~~~-~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~ 341 (552)
...+..+.+.++.+.. .+|+++++||||........ ....+...+..-. ...++..+.+++.++.++.....
T Consensus 78 ~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~ 151 (386)
T 3av0_A 78 VKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKS 151 (386)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCST
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHH
Confidence 1234456666777643 58999999999986432110 1111111010000 11122222256888888764322
Q ss_pred CCcHHHHHH---HHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 008826 342 DKSGHQYKW---LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (552)
Q Consensus 342 ~~~~~Q~~W---L~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 414 (552)
......+| +...+.. ..+.|++.|.|........+.. .+.. +. ++|++++||+|...+
T Consensus 152 -~~~~~~~~l~~l~~~~~~-----~~~~Ill~H~~~~~~~~~~~~~------~~~~-l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 152 -KREEMLDKLKNFESEAKN-----YKKKILMLHQGINPYIPLDYEL------EHFD-LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp -THHHHHHHHHHHHHHHHT-----CSSEEEEECCCCTTTSSSSCSS------CGGG-SC--CCSEEEECSCCSCEE
T ss_pred -HHHHHHHHHHHhhhhccc-----CCCEEEEECcCccccCCCCccc------CHHH-hh--hCCeEEccCCCCCcc
Confidence 12233333 3333321 2347888998875321111110 0111 11 399999999998743
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-10 Score=122.08 Aligned_cols=189 Identities=17% Similarity=0.217 Sum_probs=102.5
Q ss_pred eEEEEEeCCCCCCC----h-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccc
Q 008826 199 KRIAIVGDLGLTYN----T-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 261 (552)
Q Consensus 199 ~rfavigD~~~~~~----~-------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e 261 (552)
+||++++|+|++.. . ...++.+.+.+||+||++||+++.. +. +.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~-----~~------------~~-- 61 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR-----NN------------PS-- 61 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCS-----SS------------CC--
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccC-----CC------------CC--
Confidence 58999999998754 1 2233344467999999999999321 11 00
Q ss_pred ccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEE--cC-eEEEEEeccc
Q 008826 262 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFN--AG-GIHFIMLGAY 338 (552)
Q Consensus 262 ~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~--~G-~v~fI~Ldt~ 338 (552)
...+..+.+.++.+...+|+++++||||.... ..+..+... ++.+........-+.+. .| .+.|+.+.-.
T Consensus 62 --~~~~~~~~~~l~~l~~~~~v~~i~GNHD~~~~---~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~ 134 (379)
T 3tho_B 62 --VVALHDLLDYLKRMMRTAPVVVLPGNQDWKGL---KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYP 134 (379)
T ss_dssp --HHHHHHHHHHHHHHHHHSCEEECCCTTSCTTH---HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCC
T ss_pred --HHHHHHHHHHHHHHHhCCCEEEEcCCCccccC---ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCC
Confidence 12345566677777544999999999995311 111122111 11110000001112333 33 4777766432
Q ss_pred ccC----CCcHHHHHHHHHHHhccc---CCCCCEEEEEcCCCcccCCCCCCchhHH-HHHHHHHHHHHcCCcEEEEcccc
Q 008826 339 ISY----DKSGHQYKWLEKDLANVD---RSVTPWLVATWHPPWYSSYSSHYREAEC-MRVEMEALLYSYGVDIVFNGHVH 410 (552)
Q Consensus 339 ~~~----~~~~~Q~~WL~~~L~~~~---r~~~~w~Iv~~H~P~y~s~~~~~~~~~~-~r~~l~~ll~~~~VdlvlsGH~H 410 (552)
... ....++.+|+.+.|++.- .....+.|++.|.++..... +.+.+. +...+...+...++|+++.||+|
T Consensus 135 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~--~~~se~~~~~~v~~~~~~~~~dyvalGH~H 212 (379)
T 3tho_B 135 DESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG--YAGIEQGREIIINRALIPSVVDYAALGHIH 212 (379)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCS
T ss_pred CHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc--CCCCccccccccCHHHcCcCCCEEEccccc
Confidence 111 124577899999987210 01345689999998764321 000000 00112122224589999999999
Q ss_pred Cceee
Q 008826 411 AYERS 415 (552)
Q Consensus 411 ~yeR~ 415 (552)
..+..
T Consensus 213 ~~q~~ 217 (379)
T 3tho_B 213 SFREI 217 (379)
T ss_dssp SCEEE
T ss_pred CCeEe
Confidence 88654
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=6.6e-11 Score=118.40 Aligned_cols=185 Identities=18% Similarity=0.140 Sum_probs=102.4
Q ss_pred ceEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 198 ~~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+.||+++||+|.... ..++++.+.+.++|.|+++||++.. |.. .....+.++.
T Consensus 11 ~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~------g~~--------------------~~~~~~~l~~ 64 (270)
T 3qfm_A 11 MTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMP------GTG--------------------RRRILDLLDQ 64 (270)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSS------SSC--------------------SHHHHHHHHT
T ss_pred ccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC--------------------HHHHHHHHHc
Confidence 689999999997532 2345666666789999999999942 220 0123333433
Q ss_pred hhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHh
Q 008826 277 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLA 356 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~ 356 (552)
+ .|+++|.||||..... .....+.+.. ....+.+ ....+.......++++||++...
T Consensus 65 ~---~~~~~v~GNhD~~~~~------~~~~~~~~~~-----~~~~~~~---------~~~~~~~~~L~~~~~~~L~~LP~ 121 (270)
T 3qfm_A 65 L---PITARVLGNWEDSLWH------GVRKELDSTR-----PSQRYLL---------RQCQYVLEEISLEEIEVLHNQPL 121 (270)
T ss_dssp S---CEEEECCCHHHHHHHH------HHTTCSCTTS-----HHHHHHH---------HHHHHHHTTSCHHHHHHHHSCCS
T ss_pred c---CCEEEEcCChHHHHHH------hhccccCCCc-----HHHHHHH---------HHHHHHHHHcCHHHHHHHHhCCC
Confidence 3 4789999999975210 0000000000 0000000 00001112346889999986443
Q ss_pred cccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCC
Q 008826 357 NVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 357 ~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
..........|++.|..+...... +-....-.+.+..++.+.++|++|+||+|.-.... ..+|..+|..|+.
T Consensus 122 ~~~~~~~g~~i~lvHg~p~~~~~~-~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-------~~~~~~~iNpGSv 193 (270)
T 3qfm_A 122 QIHRQFGDLTVGISHHLPDKNWGR-ELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-------GTGGQLIVNPGSI 193 (270)
T ss_dssp EEEEEETTEEEEEESSBTTBSSSS-TTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-------CTTSCEEEEECCS
T ss_pred ceEEEECCcEEEEEECCCCCCCCc-eecCCCcHHHHHHHhcccCCCEEEECCcCchHhee-------ccCCEEEEECCCc
Confidence 321111223566777554332111 00000113466677778899999999999643321 1358899999998
Q ss_pred CCc
Q 008826 437 GNL 439 (552)
Q Consensus 437 G~~ 439 (552)
|..
T Consensus 194 g~p 196 (270)
T 3qfm_A 194 GQP 196 (270)
T ss_dssp SSC
T ss_pred cCC
Confidence 874
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=7.5e-11 Score=118.94 Aligned_cols=199 Identities=15% Similarity=0.030 Sum_probs=107.8
Q ss_pred ceEEEEEeCCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 198 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 198 ~~rfavigD~~~~~~~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
.+||+++||+|..... + .-.++|+||++||++.. |. ......+.++++.+
T Consensus 59 ~mri~~iSD~H~~~~~---l---~i~~~D~vi~aGDl~~~------g~------------------~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDG---I---QMPYGDILLHTGDFTEL------GL------------------PSEVKKFNDWLGNL 108 (296)
T ss_dssp EEEEEEEBCCTTCCTT---C---CCCSCSEEEECSCCSSS------CC------------------HHHHHHHHHHHHTS
T ss_pred CeEEEEEeeCCCCcch---h---ccCCCCEEEECCcccCC------CC------------------HHHHHHHHHHHHhC
Confidence 5899999999987532 1 12479999999999942 32 12334455555554
Q ss_pred hhcCCeEEecCCchhcccccCcchHHh-----h---hhcCCCCC---CCCC-CCcce----EEEEcCeEEEEEeccccc-
Q 008826 278 VSKVPIMVVEGNHEIEAQAGNQTFVAY-----S---SRFAFPSE---ESGS-LSSFY----YSFNAGGIHFIMLGAYIS- 340 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~~~~~~~~f~~y-----~---~~f~~P~~---~~~~-~~~~y----Ysf~~G~v~fI~Ldt~~~- 340 (552)
. ..++++|+||||...+.. .+... . ..-..+.. .... ..+.. -+..+++++|+...-...
T Consensus 109 ~-~~~v~~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~ 185 (296)
T 3rl5_A 109 P-YEYKIVIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWF 185 (296)
T ss_dssp C-CSEEEECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC-
T ss_pred C-CCeEEEEcCCcccccchh--hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCC
Confidence 2 245899999999964311 01100 0 00000000 0000 00111 234567889888543211
Q ss_pred --CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCC-chhHHHHHHHHHHH-HHcCCcEEEEccccCceeee
Q 008826 341 --YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY-REAECMRVEMEALL-YSYGVDIVFNGHVHAYERSN 416 (552)
Q Consensus 341 --~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~-~~~~~~r~~l~~ll-~~~~VdlvlsGH~H~yeR~~ 416 (552)
+....++.+++.+.+.... . ...|++.|.|++....... .....-.+.+.+++ .+++++++++||+|......
T Consensus 186 ~~~~f~~~~~~~~~~~~~~ip-~--~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~ 262 (296)
T 3rl5_A 186 NGWGFNLPRGQSLLDKWNLIP-E--GTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM 262 (296)
T ss_dssp -CCTTBCCTTHHHHHHHTTSC-T--TCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE
T ss_pred CCcCCCcchHHHHHHHHhhCC-C--CCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceE
Confidence 1112222334444444442 2 2358889999987632110 00000113455555 58899999999999753321
Q ss_pred eccccccCCCCcEEEEECCCCCc
Q 008826 417 RVFNYTLDPCGPVHITIGDGGNL 439 (552)
Q Consensus 417 pv~n~~~~~~G~vyiv~G~gG~~ 439 (552)
..+++++|..|+-|..
T Consensus 263 -------~~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 263 -------TDGYTTYINASTCTVS 278 (296)
T ss_dssp -------ECSSCEEEECBCSCTT
T ss_pred -------EECCEEEEECCcCCcC
Confidence 1357889988887764
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.17 E-value=8.7e-10 Score=102.79 Aligned_cols=58 Identities=10% Similarity=0.027 Sum_probs=40.8
Q ss_pred EEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCC
Q 008826 365 WLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (552)
Q Consensus 365 w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~ 438 (552)
+.|++.|.|++.... . .+.+.+++.+++++++++||+|...... .+|+.++..|+.|.
T Consensus 78 ~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 78 TKIIQTHGHLFDINF----N----FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQ 135 (176)
T ss_dssp EEEEEECSGGGTTTT----C----SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSS
T ss_pred eEEEEECCCccCCCC----C----HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCc
Confidence 467888888765321 1 1356677788999999999999765432 24788888887664
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.03 E-value=6.8e-10 Score=105.22 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=35.1
Q ss_pred EEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 008826 365 WLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (552)
Q Consensus 365 w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 414 (552)
+.|++.|.|++......+. ...+.+.+++.+++++++++||+|....
T Consensus 107 ~~i~~~H~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp EEEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred cEEEEEccCCcCCCccccc---chHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 4788889888765433332 2357888899999999999999997644
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-09 Score=102.17 Aligned_cols=140 Identities=17% Similarity=0.177 Sum_probs=84.2
Q ss_pred eEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 199 ~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+||+++||+|.... ..++++.+.+.++|+|+++||++.. ...+.++.+
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------------------------~~~~~l~~l 74 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------------------------FVIKEFENL 74 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------------------------HHHHHGGGC
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------------------------HHHHHHHhc
Confidence 89999999995422 2345556666799999999999821 122233333
Q ss_pred hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhc
Q 008826 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 357 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~ 357 (552)
..|+++|+||||.... .+..+ + .|. + .. + +. ... ..
T Consensus 75 --~~~~~~V~GNhD~~~~----~~~~~---~-~~~---~-~~--~---------l~--~~~-----------------~~ 110 (190)
T 1s3l_A 75 --NANIIATYGNNDGERC----KLKEW---L-KDI---N-EE--N---------II--DDF-----------------IS 110 (190)
T ss_dssp --SSEEEEECCTTCCCHH----HHHHH---H-HHH---C-TT--C---------EE--ESE-----------------EE
T ss_pred --CCCEEEEeCCCcchHH----HHHHH---h-ccc---C-hh--h---------hc--ccc-----------------eE
Confidence 5799999999997521 01111 1 000 0 00 0 00 000 00
Q ss_pred ccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeeccccccCCCCcEEEEECCC
Q 008826 358 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 358 ~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~g 436 (552)
.. ...+.|++.|.|.+. +.+.+.+. ++|++++||+|..+... .+++.+|..|+.
T Consensus 111 ~~--~~~~~ill~Hg~~~~---------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~ 165 (190)
T 1s3l_A 111 VE--IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGEC 165 (190)
T ss_dssp EE--ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCS
T ss_pred Ee--eCCcEEEEECCChHH---------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcc
Confidence 11 123578888987543 23445565 99999999999866542 247888988987
Q ss_pred CC
Q 008826 437 GN 438 (552)
Q Consensus 437 G~ 438 (552)
|.
T Consensus 166 ~~ 167 (190)
T 1s3l_A 166 CG 167 (190)
T ss_dssp SC
T ss_pred cc
Confidence 75
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.00 E-value=2.6e-09 Score=105.06 Aligned_cols=178 Identities=17% Similarity=0.163 Sum_probs=94.9
Q ss_pred ceEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
.+||+++||+|..... .+.++.+. ++|.++++||++.. |.. . ....+.+..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~------g~~------------------~--~~~~~~l~~ 54 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGY------GPR------------------P--RECVELVRV 54 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSS------SSC------------------H--HHHHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCC------CCC------------------H--HHHHHHHHh
Confidence 5799999999964321 22333333 89999999999942 220 1 123333433
Q ss_pred hhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHh
Q 008826 277 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLA 356 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~ 356 (552)
+ ..++.+.||||...... +.... +..... ..+ .........++++||++...
T Consensus 55 ~---~~~~~v~GNhD~~~~~~----------~~~~~------------~~~~~~--~~~-~~~~~~l~~~~~~~L~~lp~ 106 (246)
T 3rqz_A 55 L---APNISVIGNHDWACIGR----------LSLDE------------FNPVAR--FAS-YWTTMQLQAEHLQYLESLPN 106 (246)
T ss_dssp H---CSSEECCCHHHHHHTCC----------CCCC--------------CGGGG--CHH-HHHHHHCCHHHHHHHHHCCS
T ss_pred c---CCCEEEeCchHHHHhcc----------CCccc------------cCHHHH--HHH-HHHHHHcCHHHHHHHHhCCc
Confidence 3 23699999999852110 00000 000000 000 00011235789999986544
Q ss_pred cccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeee----------cc--cccc-
Q 008826 357 NVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR----------VF--NYTL- 423 (552)
Q Consensus 357 ~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~p----------v~--n~~~- 423 (552)
.... . .|++.|.++..... .+... ...+.++|.+++++++|+||+|.-..... .. ....
T Consensus 107 ~~~~-~---~i~~~Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (246)
T 3rqz_A 107 RMID-G---DWTVVHGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLD 178 (246)
T ss_dssp EEEE-T---TEEEESSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEE
T ss_pred EEEE-C---CEEEEECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceee
Confidence 3321 1 35566765544321 11111 24567788899999999999996432210 00 0000
Q ss_pred CCCCcEEEEECCCCCc
Q 008826 424 DPCGPVHITIGDGGNL 439 (552)
Q Consensus 424 ~~~G~vyiv~G~gG~~ 439 (552)
-+.|...|..|+-|..
T Consensus 179 l~~g~~ivNpGSVG~P 194 (246)
T 3rqz_A 179 VSSGRYIINPGAVGQP 194 (246)
T ss_dssp CSSSCEEEEECCSSCC
T ss_pred cCCCeEEEECCccCCC
Confidence 0235788888998874
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-08 Score=94.72 Aligned_cols=62 Identities=19% Similarity=0.148 Sum_probs=43.5
Q ss_pred ceEEEEEeCCCCCCC---hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 198 ~~rfavigD~~~~~~---~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
-+||+++||+|...+ ..+.++++. .++|+|+++||++.. ...+.+
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------------------------~~~~~l 69 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------------------------DTVILL 69 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------------------------HHHHHH
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------------------------HHHHHH
Confidence 379999999995222 334555554 689999999999831 123334
Q ss_pred HHhhhcCCeEEecCCchhc
Q 008826 275 QNLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~ 293 (552)
+.+ ..|++.++||||..
T Consensus 70 ~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 70 EKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHH--TSSEEECCCSSSCG
T ss_pred Hhc--CCCEEEEECCCCcH
Confidence 443 36999999999974
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.93 E-value=4.7e-08 Score=103.08 Aligned_cols=40 Identities=25% Similarity=0.360 Sum_probs=31.8
Q ss_pred CceEEEEEeCCCCCCC---------h----HHHHHHHHhCCCCEEEEcCCccc
Q 008826 197 YPKRIAIVGDLGLTYN---------T----TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 197 ~~~rfavigD~~~~~~---------~----~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
..+||++++|+|++.. . .++++.+.+.+||+||++||++.
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 64 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 64 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 4799999999998743 1 33455666789999999999985
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.92 E-value=7.2e-09 Score=106.53 Aligned_cols=73 Identities=21% Similarity=0.370 Sum_probs=51.7
Q ss_pred eEEEEEeCCCCCCCh--------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 199 KRIAIVGDLGLTYNT--------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 199 ~rfavigD~~~~~~~--------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
+||+++||+|.+... ..+++.+.+.+||+||++||+++.. . +. .
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~------~------------~~----~ 58 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSS------R------------PS----P 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSS------S------------CC----H
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCC------C------------CC----H
Confidence 589999999997531 2334555568999999999998421 1 00 1
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEecCCchhc
Q 008826 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIE 293 (552)
Q Consensus 265 ~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~ 293 (552)
..+..+.+.++.+. ..+|+++++||||..
T Consensus 59 ~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 23455566777764 369999999999985
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=2e-07 Score=98.70 Aligned_cols=40 Identities=25% Similarity=0.342 Sum_probs=31.7
Q ss_pred CceEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCccc
Q 008826 197 YPKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 197 ~~~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
..+||++++|+|++... ..+++.+.+.+||+||++||++.
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd 83 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFH 83 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCcccc
Confidence 47999999999987421 33455566789999999999985
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.8e-07 Score=99.50 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=32.0
Q ss_pred CceEEEEEeCCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCccc
Q 008826 197 YPKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 197 ~~~rfavigD~~~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
..+||++++|+|++... ..+++.+.+.+||+||++||++.
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 127 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 127 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBS
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 37999999999987431 34566666789999999999985
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=2.1e-07 Score=102.21 Aligned_cols=174 Identities=18% Similarity=0.136 Sum_probs=94.4
Q ss_pred CceEEEEEeCCCCCCC------------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCC
Q 008826 197 YPKRIAIVGDLGLTYN------------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 257 (552)
Q Consensus 197 ~~~rfavigD~~~~~~------------------~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~ 257 (552)
..++|++++|+|.... ....++++.+.+|| +++.+||++.. ..
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~g-------s~----------- 89 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQG-------TL----------- 89 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSS-------SH-----------
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCC-------cH-----------
Confidence 3699999999996421 13456666666788 88999999942 20
Q ss_pred ccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC-----C-----CCCcceEEEEc
Q 008826 258 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-----G-----SLSSFYYSFNA 327 (552)
Q Consensus 258 ~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-----~-----~~~~~yYsf~~ 327 (552)
... + .......+.|+.+ -+-+.++||||+... ...+..+.+...+|.-.. + .....|..++.
T Consensus 90 -~~~-~-~~~~~~~~~ln~l---g~d~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~ 161 (552)
T 2z1a_A 90 -YFN-Q-YRGLADRYFMHRL---RYRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVV 161 (552)
T ss_dssp -HHH-H-HTTHHHHHHHHHT---TCCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEE
T ss_pred -HHH-H-hCCcHHHHHHHhc---CCCccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEE
Confidence 000 0 0112233444444 233678999998631 122333333333321110 0 01235667788
Q ss_pred CeEE--EEEecccc----c-------CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHH
Q 008826 328 GGIH--FIMLGAYI----S-------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 394 (552)
Q Consensus 328 G~v~--fI~Ldt~~----~-------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ 394 (552)
++++ ||.+.+.. . +....++.+.+.+.|++ .+...+|++.|.|.... ..
T Consensus 162 ~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~ 223 (552)
T 2z1a_A 162 GGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LK 223 (552)
T ss_dssp TTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HH
T ss_pred CCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HH
Confidence 8754 55554321 0 01112344444445553 23456899999885321 12
Q ss_pred HHHH-cCCcEEEEccccCcee
Q 008826 395 LLYS-YGVDIVFNGHVHAYER 414 (552)
Q Consensus 395 ll~~-~~VdlvlsGH~H~yeR 414 (552)
+..+ .+||++|+||+|....
T Consensus 224 la~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 224 LARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp HHTTCSSCCEEEECSSCCCBS
T ss_pred HHHhCCCccEEEeCCcCcccc
Confidence 2233 4899999999997543
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-06 Score=95.16 Aligned_cols=188 Identities=16% Similarity=0.157 Sum_probs=95.6
Q ss_pred ceEEEEEeCCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCcc
Q 008826 198 PKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259 (552)
Q Consensus 198 ~~rfavigD~~~~~~-----------------~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~ 259 (552)
.++|++++|+|.... ....++++.+..++ ++|.+||++.. .. .
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g-------s~------------~ 79 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQG-------SP------------F 79 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSS-------SH------------H
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCC-------cH------------H
Confidence 699999999996531 13456666666776 77889999942 20 0
Q ss_pred ccccHHH----HHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCC-----C--CCCcceEEEEcC
Q 008826 260 HETYQPR----WDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-----G--SLSSFYYSFNAG 328 (552)
Q Consensus 260 ~e~y~~~----wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-----~--~~~~~yYsf~~G 328 (552)
. .|-.. +....+.|+.+ ... ++++||||+... ...+..+.....+|.-.. + .....|.-++.+
T Consensus 80 ~-~~~~~~~~~~~~~~~~ln~l--g~D-~~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~ 153 (527)
T 3qfk_A 80 C-NYLIAHSGSSQPLVDFYNRM--AFD-FGTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVG 153 (527)
T ss_dssp H-HHHHHTTCSSHHHHHHHHHT--CCC-EECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEET
T ss_pred H-HHHhhcccCcchHHHHHHhc--CCc-EEeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEEC
Confidence 0 00000 12334445444 333 567999997532 233344444434332111 0 011346667888
Q ss_pred eEE--EEEecccc--cCCC--------cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCC-CC-----CchhHHHHH
Q 008826 329 GIH--FIMLGAYI--SYDK--------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS-SH-----YREAECMRV 390 (552)
Q Consensus 329 ~v~--fI~Ldt~~--~~~~--------~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~-~~-----~~~~~~~r~ 390 (552)
+++ ||.+.+.. .+.. -....+.+++.+++.+ .+...+|+++|.+...... .. ..+.. ..
T Consensus 154 G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~ 230 (527)
T 3qfk_A 154 DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GY 230 (527)
T ss_dssp TEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HH
T ss_pred CEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HH
Confidence 755 45554421 1110 1122334444444333 2456799999987643210 00 01100 01
Q ss_pred HHHHHHHHcCCcEEEEccccCcee
Q 008826 391 EMEALLYSYGVDIVFNGHVHAYER 414 (552)
Q Consensus 391 ~l~~ll~~~~VdlvlsGH~H~yeR 414 (552)
++..-+ ..+||++|+||+|...-
T Consensus 231 ~la~~~-~~giDlIlgGHtH~~~~ 253 (527)
T 3qfk_A 231 AMLEAF-SKDIDIFITGHQHRQIA 253 (527)
T ss_dssp HHHHHH-GGGCSEEECCSSCCEEE
T ss_pred HHHHhc-CCCCcEEEECCCCcccc
Confidence 222212 24899999999997543
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.45 E-value=4.4e-07 Score=86.86 Aligned_cols=75 Identities=16% Similarity=0.273 Sum_probs=47.5
Q ss_pred eEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 199 ~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+||+++||+|.... ..+.++.+.+.++|+|+++||+++. |... ...+.|. -....+.++.+
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~------g~~~----------~~~~~~~--~~~~~~~l~~~ 87 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNH------GPRN----------ALPEGYA--PAKVVERLNEV 87 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCC------CTTS----------CCCTTBC--HHHHHHHHHTT
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCcccc------Cccc----------ccccccC--HHHHHHHHHhc
Confidence 79999999997532 2344555555689999999999952 2100 0111111 12344455544
Q ss_pred hhcCCeEEecCCchhc
Q 008826 278 VSKVPIMVVEGNHEIE 293 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~ 293 (552)
..|+++++||||..
T Consensus 88 --~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 88 --AHKVIAVRGNCDSE 101 (208)
T ss_dssp --GGGEEECCCTTCCH
T ss_pred --CCceEEEECCCchH
Confidence 35899999999974
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.44 E-value=2.3e-07 Score=101.04 Aligned_cols=184 Identities=17% Similarity=0.141 Sum_probs=94.0
Q ss_pred CceEEEEEeCCCCCCC-----------hHHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 197 YPKRIAIVGDLGLTYN-----------TTCTINHMSSN----EP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-----------~~~~l~~l~~~----~p-Dfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
..++|++++|+|.... ....++++.+. +| ++++.+||++. |.. ..
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~-------g~~------------~~ 67 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINT-------GVP------------ES 67 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSS-------SCH------------HH
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCC-------Ccc------------hh
Confidence 4689999999997532 12345555432 46 79999999983 220 00
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCC-------CC-CCCcceEEEEcCeEE-
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE-------SG-SLSSFYYSFNAGGIH- 331 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~-~~~~~yYsf~~G~v~- 331 (552)
+. .......+.|+.+ . +-++++||||+... ...+..+.....+|.-. .+ .....|..++.++++
T Consensus 68 ~~--~~~~~~~~~ln~l--g-~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kI 140 (516)
T 1hp1_A 68 DL--QDAEPDFRGMNLV--G-YDAMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (516)
T ss_dssp HT--TTTHHHHHHHHHH--T-CCEEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred hh--cCCcHHHHHHhcc--C-CCEEeeccccccCC--HHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEE
Confidence 00 0112334455554 2 34678999999532 12233333322333111 00 012345667888754
Q ss_pred -EEEeccccc--CC-----------CcHHH-HHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCC--CchhHHHHHHHHH
Q 008826 332 -FIMLGAYIS--YD-----------KSGHQ-YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH--YREAECMRVEMEA 394 (552)
Q Consensus 332 -fI~Ldt~~~--~~-----------~~~~Q-~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~--~~~~~~~r~~l~~ 394 (552)
||.+.+... +. ...+. .+|++ .|++. .+...+|++.|.|........ .... ..+..
T Consensus 141 giiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~~----~~la~ 213 (516)
T 1hp1_A 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPGD----VEMAR 213 (516)
T ss_dssp EEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCCH----HHHHH
T ss_pred EEEEecccCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCchH----HHHHH
Confidence 555543211 10 11122 33333 34421 145679999999975432110 0111 22333
Q ss_pred HHHHcCCcEEEEccccCce
Q 008826 395 LLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 395 ll~~~~VdlvlsGH~H~ye 413 (552)
.+...+||++|+||+|...
T Consensus 214 ~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 214 ALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp HSCTTSSSEEECCSSCCBC
T ss_pred hCCCCceeEEECCCCCccc
Confidence 3333459999999999753
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.38 E-value=3.4e-06 Score=92.67 Aligned_cols=153 Identities=19% Similarity=0.152 Sum_probs=79.4
Q ss_pred HHHHHHhC--C--CC-EEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCc
Q 008826 216 TINHMSSN--E--PD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNH 290 (552)
Q Consensus 216 ~l~~l~~~--~--pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNH 290 (552)
.++++.+. + || ++|.+||++.. .. .. .+ .......+.|+.+ ..+++ + |||
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~g-------s~------------~~-~~-~~g~~~~~~ln~l--g~d~~-~-GNH 164 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTN-------SG------------LS-LL-TRGEAVVRWQNLV--GVDHM-V-SHW 164 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSS-------SH------------HH-HH-HTTHHHHHHHHHH--TCCEE-C-CSG
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCc-------ch------------hh-hh-hCCHHHHHHHHhh--CCcEE-e-cch
Confidence 34555543 3 88 89999999942 20 00 00 0112344556655 56665 6 999
Q ss_pred hhcccccCcchHHhhhhcCCCCCCC-------C-CCCcceEEEEcCeEE--EEEecccc-------------cCCCcHHH
Q 008826 291 EIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAGGIH--FIMLGAYI-------------SYDKSGHQ 347 (552)
Q Consensus 291 D~~~~~~~~~f~~y~~~f~~P~~~~-------~-~~~~~yYsf~~G~v~--fI~Ldt~~-------------~~~~~~~Q 347 (552)
|+.. +...+..+.+.+.+|.-.. + .....|.-++.++++ ||.+.+.. .+....+.
T Consensus 165 Efd~--G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (562)
T 2wdc_A 165 EWTL--GRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERR 242 (562)
T ss_dssp GGGG--CHHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHH
T ss_pred hccc--CHHHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHH
Confidence 9852 2233444444443332110 0 012245567778754 55554310 11112233
Q ss_pred HHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHH-cCCcEEEEccccCce
Q 008826 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIVFNGHVHAYE 413 (552)
Q Consensus 348 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 413 (552)
.+-+.+.|++ .+...+|++.|.|.... ..+.++ .+||++|+||+|...
T Consensus 243 ~~~~v~~l~~---~~~d~iIvLsH~g~~~d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 243 LQEAVDKARA---EGANAVVLLSHNGMQLD---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHHHHHHHH---TTCSEEEEEECSCHHHH---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred HHHHHHHHHH---CCCCEEEEEeCCCCcch---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 3333333443 34567999999885310 123333 489999999999754
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=5.7e-07 Score=98.63 Aligned_cols=176 Identities=16% Similarity=0.207 Sum_probs=92.0
Q ss_pred CceEEEEEeCCCCCCC---------------------hHHHHHHHHhCCC-CEEEEcCCcccccccccCCCCCCCCcCCC
Q 008826 197 YPKRIAIVGDLGLTYN---------------------TTCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSF 254 (552)
Q Consensus 197 ~~~rfavigD~~~~~~---------------------~~~~l~~l~~~~p-Dfvl~~GDl~Y~d~~~~~G~~~~cy~~~~ 254 (552)
..++|++++|+|.... ....++++.+.+| +++|.+||++....+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~-------------- 89 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 89 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH--------------
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchh--------------
Confidence 4799999999996421 1234566665566 599999999943110
Q ss_pred CCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchH-HhhhhcCCCCCCCC---C---------CCcc
Q 008826 255 SKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFV-AYSSRFAFPSEESG---S---------LSSF 321 (552)
Q Consensus 255 ~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~-~y~~~f~~P~~~~~---~---------~~~~ 321 (552)
... .......+.|+.+ ... ++++||||+... ...+. .+.....+|.-... . ....
T Consensus 90 -----~~~--~~g~~~~~~ln~l--g~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~ 157 (546)
T 4h2g_A 90 -----FTV--YKGAEVAHFMNAL--RYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 157 (546)
T ss_dssp -----HHH--HTTHHHHHHHHHH--TCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBS
T ss_pred -----hhh--hCChHHHHHHHhc--CCc-EEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCC
Confidence 000 0112334445544 333 578999998522 11222 23333333321110 0 1234
Q ss_pred eEEEEcCeEEE--EEecccc--c-CCC-----cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHH
Q 008826 322 YYSFNAGGIHF--IMLGAYI--S-YDK-----SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVE 391 (552)
Q Consensus 322 yYsf~~G~v~f--I~Ldt~~--~-~~~-----~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~ 391 (552)
|.-++.+++++ |.+.+.. . ... -....+.+++.+++.+......+|++.|.+... . ..
T Consensus 158 ~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------d----~~ 225 (546)
T 4h2g_A 158 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------D----KL 225 (546)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H----HH
T ss_pred eEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------h----HH
Confidence 66678887665 4443311 0 000 012233444444433323456799999987431 0 12
Q ss_pred HHHHHHH-cCCcEEEEccccCce
Q 008826 392 MEALLYS-YGVDIVFNGHVHAYE 413 (552)
Q Consensus 392 l~~ll~~-~~VdlvlsGH~H~ye 413 (552)
+.++ .+||++|+||+|...
T Consensus 226 ---la~~~~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 226 ---IAQKVRGVDVVVGGHSNTFL 245 (546)
T ss_dssp ---HHHHSTTCCEEECCSSCCCC
T ss_pred ---HHHhCCCCcEEEeCCcCccc
Confidence 2222 379999999999753
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2.9e-06 Score=93.61 Aligned_cols=176 Identities=18% Similarity=0.168 Sum_probs=93.7
Q ss_pred CceEEEEEeCCCCCCC-------------------h---HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCC
Q 008826 197 YPKRIAIVGDLGLTYN-------------------T---TCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCS 253 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-------------------~---~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~ 253 (552)
..++|++++|+|.... . ...++++.+.+++ ++|.+||++....+.
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~------------ 78 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF------------ 78 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH------------
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee------------
Confidence 4699999999995421 1 2345666655666 889999999532110
Q ss_pred CCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCC------CCC----CCcceE
Q 008826 254 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE------SGS----LSSFYY 323 (552)
Q Consensus 254 ~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~~----~~~~yY 323 (552)
..+ ......+.|+.+ .. -++++||||+... ...+..+.+...+|.-. .+. .-..|.
T Consensus 79 -------~~~--~g~~~~~~ln~l--g~-D~~tlGNHEfd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~ 144 (579)
T 3ztv_A 79 -------TLF--GGSADAAVMNAG--NF-HYFTLGNHEFDAG--NEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYD 144 (579)
T ss_dssp -------HTT--TTHHHHHHHHHH--TC-SEEECCSGGGTTH--HHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEE
T ss_pred -------eec--CCHHHHHHHHhc--Cc-CeeeccccccccC--HHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeE
Confidence 000 112234445544 23 3577999998522 23334444444443211 010 113466
Q ss_pred EEEcCeEE--EEEecc-c-c----cCCC---cHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHH
Q 008826 324 SFNAGGIH--FIMLGA-Y-I----SYDK---SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 392 (552)
Q Consensus 324 sf~~G~v~--fI~Ldt-~-~----~~~~---~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l 392 (552)
-++.++++ ||.+.+ . . .... -....+-+++.+++.+......+|++.|.+... + ..
T Consensus 145 i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~---------d---~~- 211 (579)
T 3ztv_A 145 IFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK---------N---IE- 211 (579)
T ss_dssp EEEETTEEEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH---------H---HH-
T ss_pred EEEECCEEEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh---------h---HH-
Confidence 67888754 566633 1 0 0000 112233444444444334456699999976421 0 11
Q ss_pred HHHHHH-cCCcEEEEccccCce
Q 008826 393 EALLYS-YGVDIVFNGHVHAYE 413 (552)
Q Consensus 393 ~~ll~~-~~VdlvlsGH~H~ye 413 (552)
+..+ .+||++|+||+|...
T Consensus 212 --la~~~~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 212 --IAQKVNDIDVIVTGDSHYLY 231 (579)
T ss_dssp --HHHHCSSCCEEEECSSCCEE
T ss_pred --HHHhCCCCCEEEeCCCCccc
Confidence 2222 379999999999865
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=3.3e-06 Score=91.69 Aligned_cols=185 Identities=19% Similarity=0.164 Sum_probs=93.3
Q ss_pred ceEEEEEeCCCCCCC----------------h---HHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCCCCcCCCCCC
Q 008826 198 PKRIAIVGDLGLTYN----------------T---TCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKT 257 (552)
Q Consensus 198 ~~rfavigD~~~~~~----------------~---~~~l~~l~~~~pDfvl~-~GDl~Y~d~~~~~G~~~~cy~~~~~~~ 257 (552)
.++|++++|+|.... . ...++++.+.+++.+++ +||++....+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~----------------- 68 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI----------------- 68 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-----------------
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-----------------
Confidence 689999999995321 1 33466666677887766 9999842100
Q ss_pred ccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCC-------CCC-C-CcceEEEEcC
Q 008826 258 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE-------SGS-L-SSFYYSFNAG 328 (552)
Q Consensus 258 ~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~~-~-~~~yYsf~~G 328 (552)
...+ ......+.|+.+ -+-++++||||+... ...+..+.+...+|.-. .+. . ...|.-++.+
T Consensus 69 --~~~~--~g~~~~~~ln~l---g~D~~tlGNHEfd~G--~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~ 139 (509)
T 3ive_A 69 --SSLT--KGKAIIDIMNTM---PFDAVTIGNHEFDHG--WDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKD 139 (509)
T ss_dssp --HHTT--TTHHHHHHHTTS---CCSEECCCGGGGTTC--HHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEET
T ss_pred --hhhc--CChHHHHHHHhc---CCcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEEC
Confidence 0000 112233444433 244677899998532 22333333333333211 010 1 2346667888
Q ss_pred eEE--EEEeccc-----ccC----C--CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch----hHHHHHH
Q 008826 329 GIH--FIMLGAY-----ISY----D--KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE----AECMRVE 391 (552)
Q Consensus 329 ~v~--fI~Ldt~-----~~~----~--~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~----~~~~r~~ 391 (552)
+++ ||.+-+. ... . ......+.+++.+++.+.. ...+|+++|.+........... .....
T Consensus 140 G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d-- 216 (509)
T 3ive_A 140 GVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKD-- 216 (509)
T ss_dssp TEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHH--
T ss_pred CEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchH--
Confidence 755 5555321 000 0 0122344455555444333 6779999998753221110000 00001
Q ss_pred HHHHHHHc-CCcEEEEccccCc
Q 008826 392 MEALLYSY-GVDIVFNGHVHAY 412 (552)
Q Consensus 392 l~~ll~~~-~VdlvlsGH~H~y 412 (552)
..+.++. +||++|+||+|..
T Consensus 217 -~~la~~~~giDlIlgGHtH~~ 237 (509)
T 3ive_A 217 -IQTASQVKGLDILITGHAHVG 237 (509)
T ss_dssp -HHHHHHCSSCCEEEEESSCCC
T ss_pred -HHHHhcCCCCcEEEeCCcCcc
Confidence 1233332 7999999999964
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.22 E-value=1e-06 Score=84.77 Aligned_cols=66 Identities=27% Similarity=0.351 Sum_probs=42.5
Q ss_pred ceEEEEEeCCCCCCC-hHHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYN-TTCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 198 ~~rfavigD~~~~~~-~~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
..|++++||+|.... ..+.++.+.. .++|.++++||+++. |.. + .+.++
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~------g~~------------------~-----~~~~~ 62 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDR------GAE------------------N-----VECLE 62 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSS------SSC------------------H-----HHHHG
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCC------CCC------------------h-----HHHHH
Confidence 468999999996532 1233444433 368999999999942 220 1 12233
Q ss_pred HhhhcCCeEEecCCchhc
Q 008826 276 NLVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~ 293 (552)
.+. ..+++.+.||||..
T Consensus 63 ~l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 63 LIT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGG-STTEEECCCHHHHH
T ss_pred HHh-cCCEEEEccCcHHH
Confidence 332 35899999999975
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.18 E-value=6.6e-05 Score=82.24 Aligned_cols=194 Identities=18% Similarity=0.161 Sum_probs=96.4
Q ss_pred EEcCCCCCCCCCceEEEEEeCCCCCCC--------------hHHHH---HHHH-hCCCC-EEEEcCCcccccccccCCCC
Q 008826 186 FRTLPASGPQSYPKRIAIVGDLGLTYN--------------TTCTI---NHMS-SNEPD-LVLLVGDVTYANLYLTNGTG 246 (552)
Q Consensus 186 F~T~p~~~~~~~~~rfavigD~~~~~~--------------~~~~l---~~l~-~~~pD-fvl~~GDl~Y~d~~~~~G~~ 246 (552)
+-++|........++|++++|+|.... ..+.. +++. +.+++ ++|.+||++....+.+
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~---- 78 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSD---- 78 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHH----
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchh----
Confidence 445555544445799999999997521 12222 3322 35788 5799999994321100
Q ss_pred CCCCcCCCCCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhccccc-CcchHHhhhhcCCCCCCC--------CC
Q 008826 247 SDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEES--------GS 317 (552)
Q Consensus 247 ~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~~~--------~~ 317 (552)
.+..+.....+.|+.+ ... ++++||||+..... -..+........+|.-.. +.
T Consensus 79 ---------------~~~~~g~~~~~~ln~l--g~D-a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~ 140 (557)
T 3c9f_A 79 ---------------ITSPNGLKSTPIFIKQ--DYD-LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGL 140 (557)
T ss_dssp ---------------SSSSTTTTTHHHHTTS--CCS-EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSC
T ss_pred ---------------hcccCCHHHHHHHHhc--CCC-EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCC
Confidence 0000011123444444 233 56789999963210 012222233333332111 11
Q ss_pred ---CCcceEEEEc--CeEE--EEEecccccCC------CcHHH---HHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCC
Q 008826 318 ---LSSFYYSFNA--GGIH--FIMLGAYISYD------KSGHQ---YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH 381 (552)
Q Consensus 318 ---~~~~yYsf~~--G~v~--fI~Ldt~~~~~------~~~~Q---~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~ 381 (552)
....|.-++. ++++ ||.+.+..... ....+ .+|+++.++ .+...+|++.|.+.....
T Consensus 141 ~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~--- 213 (557)
T 3c9f_A 141 FVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW--- 213 (557)
T ss_dssp EEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT---
T ss_pred ccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC---
Confidence 1234667787 7755 45544321100 01122 146665443 356779999998863111
Q ss_pred CchhHHHHHHHHHHHHH--cCCcE-EEEccccCce
Q 008826 382 YREAECMRVEMEALLYS--YGVDI-VFNGHVHAYE 413 (552)
Q Consensus 382 ~~~~~~~r~~l~~ll~~--~~Vdl-vlsGH~H~ye 413 (552)
.+. ......+.+ .+||+ +|.||.|...
T Consensus 214 -d~~----~~~~~~lA~~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 214 -GEF----YQVHQYLRQFFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp -CHH----HHHHHHHHHHCTTSEEEEEECSSCCEE
T ss_pred -ccc----cHHHHHHHHhCCCCCEEEECCCCCCCC
Confidence 111 122222333 48995 9999999873
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.7e-05 Score=77.69 Aligned_cols=190 Identities=16% Similarity=0.199 Sum_probs=100.1
Q ss_pred ceEEEEEeCCCCCCCh---HHHHHHHHhC-CCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYNT---TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (552)
Q Consensus 198 ~~rfavigD~~~~~~~---~~~l~~l~~~-~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~ 273 (552)
.+||+++||.+..... ...++++.+. ++|+++..||.+.. |.. + . ....+.
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~g------G~g------------~----~---~~~~~~ 58 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH------GKG------------L----S---LKHYEF 58 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT------TSS------------C----C---HHHHHH
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC------------c----C---HHHHHH
Confidence 5899999999854221 2235555543 68999999999842 321 0 0 123334
Q ss_pred HHHhhhcCCeEEecCCchhcccccCcchHHhhhh--c----CCCCCCCC-CCCcceEEEEcCeEE--EEEecccccCC--
Q 008826 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSR--F----AFPSEESG-SLSSFYYSFNAGGIH--FIMLGAYISYD-- 342 (552)
Q Consensus 274 l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~--f----~~P~~~~~-~~~~~yYsf~~G~v~--fI~Ldt~~~~~-- 342 (552)
|..+ .+-+ .+.||||+.... ....|.+. . ++|..... ..+..|.-++.++.+ +|.|-+...+.
T Consensus 59 ln~~--G~Da-~TlGNHefD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~ 132 (281)
T 1t71_A 59 LKEA--GVNY-ITMGNHTWFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPF 132 (281)
T ss_dssp HHHH--TCCE-EECCTTTTCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSS
T ss_pred HHhc--CCCE-EEEccCcccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCc
Confidence 4443 3443 567999997431 12222222 1 12221100 023457778888755 45444432122
Q ss_pred CcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccc
Q 008826 343 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT 422 (552)
Q Consensus 343 ~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~ 422 (552)
.-..-.+-+++.++ +.+.+.+||.+|.-. . ...+.+... -.-+||+|+.||+|...-. -.
T Consensus 133 ~~~~pf~~a~~~v~---~~~~diIIv~~H~g~--------t---~Ek~~la~~-~dg~VD~VvGgHTHv~t~d-----~~ 192 (281)
T 1t71_A 133 KTTNPFKVLKELIL---KRDCDLHIVDFHAET--------T---SEKNAFCMA-FDGYVTTIFGTHTHVPSAD-----LR 192 (281)
T ss_dssp CBCCHHHHHHHHHT---TCCCSEEEEEEECSC--------H---HHHHHHHHH-HTTTSSEEEEESSSSCCTT-----CE
T ss_pred cccCHHHHHHHHHh---hcCCCEEEEEeCCCc--------h---HHHHHHHHh-CCCCeEEEEeCCCCcCCCc-----eE
Confidence 12223445566665 246778999999421 1 111222221 2236999999999964332 11
Q ss_pred cCCCCcEEEE-ECCCCC
Q 008826 423 LDPCGPVHIT-IGDGGN 438 (552)
Q Consensus 423 ~~~~G~vyiv-~G~gG~ 438 (552)
+-++|+.||+ +|..|.
T Consensus 193 il~~gt~~i~d~G~~G~ 209 (281)
T 1t71_A 193 ITPKGSAYITDVGMCGP 209 (281)
T ss_dssp ECTTSCEEESCCCEEBC
T ss_pred EecCCcEEEecCccccC
Confidence 2347888887 244443
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.97 E-value=6.8e-05 Score=73.48 Aligned_cols=187 Identities=18% Similarity=0.266 Sum_probs=99.9
Q ss_pred eEEEEEeCCCCCCC---hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 199 ~rfavigD~~~~~~---~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
+||+++||.=.... ....+.++.+.. |+++..|..+. .|.. +. ....+.|.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~------~G~g----------------~~---~~~~~~l~ 54 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAA------RGKG----------------LD---RRSYRLLR 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTT------TTSS----------------CC---HHHHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCcc------CCCC----------------cC---HHHHHHHH
Confidence 58999999843221 234566666666 99888777663 2431 11 12233344
Q ss_pred HhhhcCCeEEecCCchhcccccCcchHHhhhhc--CCCCCC-CCCCCcceEEEEcCeEEEEEec--ccccCCCcHHHHHH
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF--AFPSEE-SGSLSSFYYSFNAGGIHFIMLG--AYISYDKSGHQYKW 350 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f--~~P~~~-~~~~~~~yYsf~~G~v~fI~Ld--t~~~~~~~~~Q~~W 350 (552)
.+ .+-++ +.||||+... ....|.+.. -.|.+- .+.....|.-++.++.++-+++ +......-..-.+-
T Consensus 55 ~~--G~D~~-T~GNHefD~~----~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~ 127 (252)
T 2z06_A 55 EA--GVDLV-SLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp HH--TCCEE-ECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred hC--CCCEE-EeccEeeECc----hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHH
Confidence 33 55555 6799999742 233333222 122221 1122456777888887665554 32211111222333
Q ss_pred HHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEE
Q 008826 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (552)
Q Consensus 351 L~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vy 430 (552)
+++.+++.+ .+.+|+.+|.-. . ...+.+.. ...-+||+|+.||+|.... +..+-++|+.|
T Consensus 128 ~~~~v~~lk---~d~IIv~~H~g~--------t---sek~~la~-~~dg~Vd~VvGgHTHv~t~-----d~~il~~gt~~ 187 (252)
T 2z06_A 128 LDRLLEEEK---ADYVLVEVHAEA--------T---SEKMALAH-YLDGRASAVLGTHTHVPTL-----DATRLPKGTLY 187 (252)
T ss_dssp HHHHHHHCC---CSEEEEEEECSC--------H---HHHHHHHH-HHBTTBSEEEEESSCSCBS-----CCEECTTSCEE
T ss_pred HHHHHHHhC---CCEEEEEeCCCc--------H---HHHHHHHH-hCCCCeEEEEcCCCCcCCC-----ccEEcCCCcEe
Confidence 555555543 667999999421 1 11122222 2234699999999997432 22234578899
Q ss_pred EE-ECCCCC
Q 008826 431 IT-IGDGGN 438 (552)
Q Consensus 431 iv-~G~gG~ 438 (552)
|+ +|..|.
T Consensus 188 itd~G~~G~ 196 (252)
T 2z06_A 188 QTDVGMTGT 196 (252)
T ss_dssp ESCCCCBEE
T ss_pred ecCCccccc
Confidence 87 355554
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00017 Score=70.87 Aligned_cols=187 Identities=16% Similarity=0.138 Sum_probs=98.6
Q ss_pred eEEEEEeCCCCCCC---hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 199 ~rfavigD~~~~~~---~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
+||+++||.=.... ....++++.+.. |+++..|+.+. .|.. +. ....+.|.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~------~G~g------------~~-------~~~~~~l~ 54 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSA------GGFG------------MH-------RDAARGAL 54 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTT------TTSS------------CC-------HHHHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCcc------CCcC------------CC-------HHHHHHHH
Confidence 58999999842211 123456665556 99998888874 2321 10 12233344
Q ss_pred HhhhcCCeEEecCCchhcccccCcchHHhhhhcC----CCCCC--CCCCCcceEEEEcCeEE--EEEecccccCCCcHHH
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEE--SGSLSSFYYSFNAGGIH--FIMLGAYISYDKSGHQ 347 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~--~~~~~~~yYsf~~G~v~--fI~Ldt~~~~~~~~~Q 347 (552)
.+ .+-+ .+.||||+... ....|.+... .|.|- .+..+..|.-++.++.+ +|.|-+......-..-
T Consensus 55 ~~--G~Da-~TlGNHefD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p 127 (255)
T 1t70_A 55 EA--GAGC-LTLGNHAWHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp HH--TCSE-EECCTTTTSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred hC--CCCE-EEeccccccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCH
Confidence 33 4444 45699999732 2233322221 23221 12234567778888755 4544443211122222
Q ss_pred HHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCC
Q 008826 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (552)
Q Consensus 348 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G 427 (552)
.+-+++.+++. +.+.+||.+|.-. ....+.+.. ...-+||+|+.||+|...-.. ..-|+|
T Consensus 128 ~~~~~~~v~~l---~~d~IIv~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~-----~il~~g 187 (255)
T 1t70_A 128 FRTMDALLERD---DLGTVFVDFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTADT-----RILKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBSCC-----EEETTT
T ss_pred HHHHHHHHHHh---CCCEEEEEeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCce-----EEcCCC
Confidence 44466666665 4667999999411 111122322 123359999999999643321 112478
Q ss_pred cEEEE-ECCCCC
Q 008826 428 PVHIT-IGDGGN 438 (552)
Q Consensus 428 ~vyiv-~G~gG~ 438 (552)
+.||+ +|..|.
T Consensus 188 t~~i~d~G~~G~ 199 (255)
T 1t70_A 188 TAYQTDAGFTGP 199 (255)
T ss_dssp EEEESCCCCBEE
T ss_pred eEEEEcCccccc
Confidence 88876 355554
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00011 Score=75.48 Aligned_cols=40 Identities=20% Similarity=0.222 Sum_probs=28.2
Q ss_pred CceEEEEEeCCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCCccc
Q 008826 197 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTY 236 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-----------------~~~~l~~l~~~~pD-fvl~~GDl~Y 236 (552)
..++|++.+|+|.... ....++++.+..++ ++|.+||++.
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~q 67 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQ 67 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSC
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCC
Confidence 4689999999996531 12345666655565 6678999994
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00049 Score=70.62 Aligned_cols=40 Identities=23% Similarity=0.202 Sum_probs=29.1
Q ss_pred CceEEEEEeCCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCCccc
Q 008826 197 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTY 236 (552)
Q Consensus 197 ~~~rfavigD~~~~~~-----------------~~~~l~~l~~~~pD-fvl~~GDl~Y 236 (552)
..++|++.+|+|.... ....++++.+..++ ++|..||++.
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~q 64 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQ 64 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCC
Confidence 3689999999996431 13356677666665 7789999994
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00083 Score=73.10 Aligned_cols=172 Identities=17% Similarity=0.197 Sum_probs=87.9
Q ss_pred CceEEEEEeCCCCCCC------------------h---HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCC
Q 008826 197 YPKRIAIVGDLGLTYN------------------T---TCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSF 254 (552)
Q Consensus 197 ~~~rfavigD~~~~~~------------------~---~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~ 254 (552)
+.++|++.+|+|.... . ...++++.+.+++ ++|.+||++....+
T Consensus 2 f~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~-------------- 67 (530)
T 4h1s_A 2 WELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 67 (530)
T ss_dssp CEEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH--------------
T ss_pred EEEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH--------------
Confidence 3589999999995321 1 2345666555665 67889999953211
Q ss_pred CCCccccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcch-HHhhhhcCCCCCCC------------CCCCcc
Q 008826 255 SKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTF-VAYSSRFAFPSEES------------GSLSSF 321 (552)
Q Consensus 255 ~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f-~~y~~~f~~P~~~~------------~~~~~~ 321 (552)
... .+.....+.|+.+. .=..++||||+... ...+ ..+.....+|.-.. ...-..
T Consensus 68 -----~~~--~~g~~~i~~mN~lg---yDa~~lGNHEFd~G--~~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~p 135 (530)
T 4h1s_A 68 -----FTV--YKGAEVAHFMNALR---YDAMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 135 (530)
T ss_dssp -----HHH--HTTHHHHHHHHHTT---CCEEECCGGGGTTT--THHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBS
T ss_pred -----HHH--hCChHHHHHHhccC---CCEEEEchhhhccC--HHHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccc
Confidence 000 01122334454441 22578999999532 1112 11222223332110 011234
Q ss_pred eEEEEcCeEEE--EEecccc-----------cCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHH
Q 008826 322 YYSFNAGGIHF--IMLGAYI-----------SYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECM 388 (552)
Q Consensus 322 yYsf~~G~v~f--I~Ldt~~-----------~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~ 388 (552)
|.-++.+++++ |.+-+.. .+...-+..+..-++|++ .+...+|++.|.-+. ..
T Consensus 136 y~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~--------~d--- 201 (530)
T 4h1s_A 136 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE--------MD--- 201 (530)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------HH---
T ss_pred eEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch--------HH---
Confidence 66778888664 4443310 011122333333444544 345569999996421 11
Q ss_pred HHHHHHHHHHc-CCcEEEEccccCc
Q 008826 389 RVEMEALLYSY-GVDIVFNGHVHAY 412 (552)
Q Consensus 389 r~~l~~ll~~~-~VdlvlsGH~H~y 412 (552)
. .+.++. +||+++.||+|..
T Consensus 202 -~---~la~~v~giD~IlgGHsH~~ 222 (530)
T 4h1s_A 202 -K---LIAQKVRGVDVVVGGHSNTF 222 (530)
T ss_dssp -H---HHHHHSTTCCEEECCSSCCC
T ss_pred -H---HHHhcCCCCCeeccCCccce
Confidence 1 223333 7999999999964
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0092 Score=51.40 Aligned_cols=93 Identities=18% Similarity=0.202 Sum_probs=55.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCC--ceEEEEEEEEeeeecccCCcccccc
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL--NHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
..|.++++.-- +.+++.|+|.-.....|..+. ....=.|+|....... ...+.
T Consensus 20 ~~P~~l~~~~~-s~tsi~lsW~~p~~~~~~i~~----~~~~Y~v~y~~~~~~~~~~~~~~-------------------- 74 (123)
T 2edd_A 20 LPPVGVQAVAL-THDAVRVSWADNSVPKNQKTS----EVRLYTVRWRTSFSASAKYKSED-------------------- 74 (123)
T ss_dssp CCCEEEEEEEE-ETTEEEEEEECSSSCSSCCCS----CCCCEEEEEEETTCTTCCCCCEE--------------------
T ss_pred CCCcceEEEEc-CCCeEEEEecCCCCCcccccC----cCceEEEEEEECCCCCccEEEEe--------------------
Confidence 46888766433 478999999854321110000 0013357776653211 11000
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
.....+.|+||+|+|.|.++|...+. ..+|....|+|.+.
T Consensus 75 ~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 75 TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 01236789999999999999975432 36888999999876
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.01 Score=49.56 Aligned_cols=98 Identities=21% Similarity=0.275 Sum_probs=59.7
Q ss_pred CCCceeEEeecC-CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 74 FEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 74 ~~P~qi~l~~~~-~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
..|..+.+.... +++++.|+|.......|. ...=.|+|....+.....- ..... ..
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~--~~~~~-------------~~ 66 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGK--------ITAYILFYTLDKNIPIDDW--IMETI-------------SG 66 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSC--------CSEEEEEEESCSSSCTTTS--EEEEE-------------ET
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCc--------eeEEEEEEEeCCCCCccce--EEEEE-------------CC
Confidence 468888777653 578999999875432111 1234577766433211000 00000 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGP 194 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~~ 194 (552)
....+.|++|+|+|.|.+||...+. ..+|+...|+|.+.+.+
T Consensus 67 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 67 DRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 2246788999999999999965442 35788899999876554
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.001 Score=65.64 Aligned_cols=38 Identities=26% Similarity=0.336 Sum_probs=26.3
Q ss_pred eEEEEEeCCCCCCC-hHHHHHHHHhCCC-CEEEEcCCccc
Q 008826 199 KRIAIVGDLGLTYN-TTCTINHMSSNEP-DLVLLVGDVTY 236 (552)
Q Consensus 199 ~rfavigD~~~~~~-~~~~l~~l~~~~p-Dfvl~~GDl~Y 236 (552)
.|++++||+|.... ..++++.+...++ |.+|++||+++
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd 58 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVN 58 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCC
Confidence 48999999995431 1233444444455 99999999994
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0014 Score=65.25 Aligned_cols=67 Identities=22% Similarity=0.377 Sum_probs=41.3
Q ss_pred eEEEEEeCCCCCCC-hHHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYN-TTCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 199 ~rfavigD~~~~~~-~~~~l~~l~~-~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+|++++||+|.... ....++.+.. .++|.++++||+++. |.. + .+..+.+..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdr------G~~------------------s--~~~l~~l~~ 54 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVAR------GPG------------------S--LDVLRYVKS 54 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSS------SSC------------------H--HHHHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCC------CCc------------------c--HHHHHHHHh
Confidence 47899999997532 1223333333 367999999999942 321 1 123333433
Q ss_pred hhhcCCeEEecCCchhc
Q 008826 277 LVSKVPIMVVEGNHEIE 293 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~ 293 (552)
+ ..+++.+.||||..
T Consensus 55 l--~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 55 L--GDSVRLVLGNHDLH 69 (280)
T ss_dssp T--GGGEEECCCHHHHH
T ss_pred C--CCceEEEECCCcHH
Confidence 3 23799999999974
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.013 Score=48.90 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=54.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-.-..+++.|+|......-|.. ...=.|+|.......+..+. . +..
T Consensus 11 ~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~------~-------------~~~ 64 (110)
T 2crz_A 11 PCLPPRLQGRPKAKEIQLRWGPPLVDGGSP-------ISCYSVEMSPIEKDEPREVY------Q-------------GSE 64 (110)
T ss_dssp CCCCCEECSCCCSSEEEEECCCCSCCTTSC-------CCEEEEEEECTTSCCCEEEE------E-------------ESC
T ss_pred CCCCceeccccCCCEEEEEeCCCCCCCCce-------eEEEEEEEEeCCCCceEEEE------e-------------CCc
Confidence 566666643345689999996532211110 12345677654433332221 0 011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..++|++|+|+|.|.|||...+. ..+|+...++|.+.+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 35678999999999999975432 357788889987654
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.012 Score=48.76 Aligned_cols=40 Identities=25% Similarity=0.442 Sum_probs=31.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGP 194 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~~ 194 (552)
..+.|++|+|+|.|.+||...+. ..+|+...|+|.+.+++
T Consensus 66 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 66 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred CEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 36788999999999999965432 36888999999887654
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.028 Score=47.11 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=56.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-- +.+++.|+|.......+. ++ ...=.|+|............ .... .+-
T Consensus 10 ~~P~~~~~~~~-~~~si~l~W~~p~~~~~~-----g~-i~gY~v~y~~~~~~~~~~~~--~~~~-------------~~~ 67 (114)
T 1x4y_A 10 AGPYITFTDAV-NETTIMLKWMYIPASNNN-----TP-IHGFYIYYRPTDSDNDSDYK--KDMV-------------EGD 67 (114)
T ss_dssp SCCEEEEEECS-SSSCEEEEEECCCTTSCC-----CC-CCEEEEEECCTTSCSGGGCC--CEEE-------------ETT
T ss_pred CCCeEEEEEec-CCCEEEEEEeCCCchhcC-----Cc-cceEEEEEEECCCCCCccee--eEec-------------CCc
Confidence 35777765433 478999999875311000 00 12335667654432100000 0000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGP 194 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~~ 194 (552)
...++|++|+|+|.|.+||..-+. ..+|+...++|.+.+.+
T Consensus 68 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 68 RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp CCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred EeEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 235789999999999999965332 36788999999876543
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.013 Score=48.69 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=29.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
.+.|+||+|+|.|.+||...+. ..+|+...++|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 5678999999999999975442 257888999998754
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.034 Score=46.73 Aligned_cols=93 Identities=20% Similarity=0.223 Sum_probs=56.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCC-CcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGE-FQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~-~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|.++.+... ..+++.|+|.... ..-| . ...=.|+|.......+... .. . ...
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~g-~-------i~~Y~v~~~~~~~~~~~~~-------~~-~---------~~~ 73 (120)
T 1x5f_A 20 APRDVVASLV-STRFIKLTWRTPASDPHG-D-------NLTYSVFYTKEGIARERVE-------NT-S---------HPG 73 (120)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSCSSC-C-------SSEEEEEEEETTCCCCEEE-------EC-S---------STT
T ss_pred CCCCcEEEec-CCCEEEEEECCCCCCCCC-c-------EEEEEEEEEECCCCCceEE-------Ee-c---------cCC
Confidence 5777766543 4789999998754 2111 1 1234577766543322110 00 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPASG 193 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~~ 193 (552)
...+.|++|+|+|.|.+||...+.. .+|+...|+|.+...
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 116 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence 3467889999999999999764432 467888999976543
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.014 Score=49.94 Aligned_cols=83 Identities=19% Similarity=0.207 Sum_probs=50.1
Q ss_pred CCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEEEEEeCCCCC
Q 008826 85 FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEP 164 (552)
Q Consensus 85 ~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P 164 (552)
.+.+++.|+|..... |. .|. ..=.|+|.......+...... + + ....++|.||+|
T Consensus 19 ~~~~sv~L~W~p~~d--gg--sPI----~~Y~I~yr~~~~~~w~~~~~~--------~--~-------~~~~~~l~~L~p 73 (114)
T 2kbg_A 19 SSGKSFKLSITKQDD--GG--API----LEYIVKYRSKDKEDQWLEKKV--------Q--G-------NKDHIILEHLQW 73 (114)
T ss_dssp CSTTCEEEEECCCCC--SS--SCC----SEEEEEEEESSCCSCCEEEEE--------E--T-------TTCCEEECCCCT
T ss_pred cCCCEEEEEEECCCC--CC--Ccc----cEEEEEEEeCCCCCcEEeEEc--------C--C-------CcCEEEEcCCCC
Confidence 457899999975421 21 111 234788887654433322110 1 1 113577999999
Q ss_pred CCEEEEEEecCCCCCCC--ceEEEEcCCCC
Q 008826 165 NNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (552)
Q Consensus 165 ~T~Y~Y~v~~~~~~~~S--~~~~F~T~p~~ 192 (552)
++.|.+||.+.+..+.| ....|+|.+.+
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred CCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 99999999875533443 35678887654
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.022 Score=47.16 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=53.7
Q ss_pred CceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEE
Q 008826 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIH 155 (552)
Q Consensus 76 P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 155 (552)
|..+.+.... .+ +.|+|......-|.-+ ..=.|+|...+...+... +... . ..+...
T Consensus 10 P~~~~~~~~~-~~-v~l~W~~P~~~~G~pi-------~~Y~v~~~~~~~~~~~~~------~~~~-~-------~~~~~~ 66 (105)
T 2haz_A 10 PSIDQVEPYS-ST-AQVQFDEPEATGGVPI-------LKYKAEWRAVGEEVWHSK------WYDA-K-------EASMEG 66 (105)
T ss_dssp CEEEEEEECS-SC-EEEEEECCSCCTTSCC-------CEEEEEEEETTCCCCEEE------EEEH-H-------HHHHHS
T ss_pred CCCCEEEEcC-Cc-EEEEEcCCcccCCccc-------cEEEEEEEECCCCCCccc------eEEc-c-------ccCCcc
Confidence 7766665444 34 9999987543222101 233577776554322111 0000 0 001124
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
.++|++|+|+|.|.+||.+-+. ..+|+...|+|+|
T Consensus 67 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 67 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 6788999999999999965432 2678889999987
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.023 Score=47.50 Aligned_cols=89 Identities=19% Similarity=0.184 Sum_probs=53.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+++.-. +.+++.|+|.......|. ...=.|+|............. ..
T Consensus 20 ~P~~l~~~~~-~~~si~l~W~~p~~~~~~--------i~~Y~v~~~~~~~~~~~~~~~--------------------~~ 70 (116)
T 1x5g_A 20 PAPNLRAYAA-SPTSITVTWETPVSGNGE--------IQNYKLYYMEKGTDKEQDVDV--------------------SS 70 (116)
T ss_dssp CCSSCEEEEE-ETTEEEEECCCCSCCSSC--------CSEEEEEEEETTCCCCCCEEE--------------------CS
T ss_pred CCCccEEEec-CCCEEEEEEeCCCCCCCc--------ccEEEEEEEECCCCccEEEec--------------------CC
Confidence 4666665433 378999999865321111 123456666554332211110 11
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..+.|++|+|+|.|.+||..-+. ..+|+...|+|.+..
T Consensus 71 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 71 HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred ceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 36788999999999999965432 257788889998654
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0058 Score=50.01 Aligned_cols=87 Identities=18% Similarity=0.240 Sum_probs=51.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCC--CcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGE--FQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~--~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
.|..+.+.. .+.+++.|+|.... ...|. ...=.|+|...+........+
T Consensus 11 ~P~~l~~~~-~~~~si~l~W~~p~~~~~~g~--------i~~Y~i~~~~~~~~~~~~~~~-------------------- 61 (103)
T 2edy_A 11 FPQNLHVTG-LTTSTTELAWDPPVLAERNGR--------IISYTVVFRDINSQQELQNIT-------------------- 61 (103)
T ss_dssp CCEEEECSS-BCSSCEECEEECCCTTSCSSC--------CCEEEEEEEETTSCCEEEEEE--------------------
T ss_pred CCeeeEEEe-cCCCEEEEEECCCCCcCCCCc--------EeEEEEEEEECCCCccEEEcC--------------------
Confidence 577766532 24689999998752 11110 123356666554422111100
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
....+.|+||+|+|.|.+||..-+. ..+|+...|+|.|
T Consensus 62 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 62 TDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp SSSCCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CcceEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 0124578999999999999865432 2577777788865
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.042 Score=45.15 Aligned_cols=89 Identities=19% Similarity=0.144 Sum_probs=54.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+... ..+++.|+|......-|. ...=.|+|............ . . .
T Consensus 10 ~P~~l~~~~~-~~~si~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~-----~------~---------~ 60 (106)
T 2ed8_A 10 PVENLQAVST-SPTSILITWEPPAYANGP--------VQGYRLFCTEVSTGKEQNIE-----V------D---------G 60 (106)
T ss_dssp CCEEEEEECS-STTEEEEEEECCSSCSSC--------CCEEEEEEEETTTCCEEEEE-----E------C---------S
T ss_pred CCceeEEEec-CCCEEEEEECCCCCCCCC--------eeEEEEEEEECCCCceEEEe-----C------C---------c
Confidence 5787776543 368999999875421111 12345677655433221110 0 0 1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~ 192 (552)
..+.|++|+|+|.|.+||..-+.. .+|+...++|....
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 101 (106)
T 2ed8_A 61 LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101 (106)
T ss_dssp SCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCC
Confidence 356789999999999999765432 46778889997643
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.028 Score=46.50 Aligned_cols=89 Identities=18% Similarity=0.183 Sum_probs=54.6
Q ss_pred CCceeEEeec-CCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~-~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+.+... .+.+++.|+|.-.....|. ...=.|+|....+..+..... .
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~------------------~-- 61 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGL--------IREYIVEYSRSGSKMWASQRA------------------A-- 61 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSC--------EEEEEEEEEETTCSCCEEEEE------------------S--
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCc--------EEEEEEEEEECCCCCeEEecC------------------C--
Confidence 5888877654 3578999999875421110 012345666554432221100 0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
...+.|++|+|+|.|.+||..-+. ..+|+...++|.+.
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2dm4_A 62 SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKG 102 (108)
T ss_dssp SSEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCSC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCCC
Confidence 126788999999999999965432 25788889999643
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.023 Score=47.01 Aligned_cols=39 Identities=31% Similarity=0.491 Sum_probs=30.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~ 193 (552)
..+.|++|+|+|.|.+||...+. ..+|+...|+|.+...
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 104 (108)
T 2djs_A 63 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSG 104 (108)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSSC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCCc
Confidence 35778999999999999975432 2577888999987643
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.00 E-value=0.019 Score=48.57 Aligned_cols=95 Identities=21% Similarity=0.229 Sum_probs=54.9
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|.++++.-- +.+++.|+|.-....-+..+ .....=.|+|......... ..+ ....
T Consensus 10 ~~P~~l~~~~~-s~tsi~lsW~~p~~~~~~~~----~~~~~Y~v~y~~~~~~~~~------~~~------------~~~~ 66 (113)
T 1x5j_A 10 MPPVGVQASIL-SHDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANTK------YKN------------ANAT 66 (113)
T ss_dssp CCCEEEEEEEE-ETTEEEEEEECTTSCSSSCC----CSSCEEEEEECBSSSSSCC------CEE------------CCBC
T ss_pred CCCcceEEEEe-cCCEEEEEecCCCCcccccc----CcCceEEEEEEECCCCCeE------EEE------------EecC
Confidence 46888876543 37899999986432111000 0001335667652111100 000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
...+.|+||+|+|.|.++|..... ..+|....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 246889999999999999865432 36888889999865
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.032 Score=59.21 Aligned_cols=179 Identities=18% Similarity=0.274 Sum_probs=96.1
Q ss_pred ceEEEEEeCCCCCCCh-H--H----HHHHHH-----------hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcc
Q 008826 198 PKRIAIVGDLGLTYNT-T--C----TINHMS-----------SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~--~----~l~~l~-----------~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~ 259 (552)
+.+++++||+|.+... . . .++.|. ..+..-+|++||++.... ...+ ..+
T Consensus 200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~-----~~~e--------~~~ 266 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHST-----QSRD--------SIN 266 (476)
T ss_dssp CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC----------------------
T ss_pred CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCcccccc-----ccch--------hhh
Confidence 5699999999998752 1 1 223332 135789999999995421 1000 000
Q ss_pred cccc---------HHHHHHHHHHHHHhhhcCCeEEecCCchhcccccC-c-----chH---HhhhhcCCCCCCCCCCCcc
Q 008826 260 HETY---------QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-Q-----TFV---AYSSRFAFPSEESGSLSSF 321 (552)
Q Consensus 260 ~e~y---------~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~-~-----~f~---~y~~~f~~P~~~~~~~~~~ 321 (552)
...| ....+.+..++..+...+|+.+.|||||-....-. . .|. .| ..+.. .. .
T Consensus 267 ~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~-~~~~~-------vt-N 337 (476)
T 3e0j_A 267 KAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY-STLQL-------VT-N 337 (476)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTS-TTEEE-------CC-S
T ss_pred hhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhc-CccEE-------eC-C
Confidence 1111 12345566778888899999999999998643211 0 111 11 01111 11 2
Q ss_pred eEEEEcCeEEEEEecccc-----cCCCcHHHHHHHHHHHhcccCC-CCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHH
Q 008826 322 YYSFNAGGIHFIMLGAYI-----SYDKSGHQYKWLEKDLANVDRS-VTPWLVATWHPPWYSSYSSHYREAECMRVEMEAL 395 (552)
Q Consensus 322 yYsf~~G~v~fI~Ldt~~-----~~~~~~~Q~~WL~~~L~~~~r~-~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~l 395 (552)
-|.|+++|++|++..... .+.....-++.|++.|+.-.-. .+| -.-|.|...... ++
T Consensus 338 P~~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~LkwrHlAPTaP-----dTl~~yP~~~~D------------pf 400 (476)
T 3e0j_A 338 PYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAP-----DTLGCYPFYKTD------------PF 400 (476)
T ss_dssp SEEEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHBTCSCTTSC-----CC------CCSC------------TT
T ss_pred CeEEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHHhccCCCCC-----CceeeccCCCCC------------ce
Confidence 356999999999887532 1222345677888888862100 001 000111110000 12
Q ss_pred HHHcCCcEEEEccccCceee
Q 008826 396 LYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 396 l~~~~VdlvlsGH~H~yeR~ 415 (552)
+-+.-.+++|+||.|.|+-.
T Consensus 401 Vi~~~PhVyf~Gnq~~f~t~ 420 (476)
T 3e0j_A 401 IFPECPHVYFCGNTPSFGSK 420 (476)
T ss_dssp SCSSCCSEEEEEEESSCEEE
T ss_pred eecCCCcEEEeCCCCcccee
Confidence 22345789999999998765
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0063 Score=61.43 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=41.3
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
.+++++||+|..... ...++.+.....+.++++||+++. |.. + .+....+..+
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDR------G~~------------------s--~evl~lL~~l 103 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDR------GYY------------------S--VETVTLLVAL 103 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSS------STT------------------H--HHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCC------CCC------------------h--HHHHHHHHHH
Confidence 469999999975321 223333333456788999999942 321 1 1223333333
Q ss_pred hhc--CCeEEecCCchhc
Q 008826 278 VSK--VPIMVVEGNHEIE 293 (552)
Q Consensus 278 ~~~--iP~~~v~GNHD~~ 293 (552)
... -.++.+.||||..
T Consensus 104 k~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 104 KVRYRERITILRGNHESR 121 (309)
T ss_dssp HHHCTTTEEECCCTTSST
T ss_pred HhhCCCcEEEEeCCCCHH
Confidence 222 3499999999986
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.043 Score=45.37 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=29.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~ 192 (552)
.++|++|+|+|.|.|||...+.. .+|+...++|.+..
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 104 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCC
Confidence 56789999999999999765532 46778889998753
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.038 Score=46.55 Aligned_cols=39 Identities=31% Similarity=0.367 Sum_probs=30.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~ 193 (552)
..+.|+||+|+|.|.+||..-+. ..+|+...|+|.+.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 46789999999999999975432 2577888999986554
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.067 Score=44.95 Aligned_cols=90 Identities=18% Similarity=0.115 Sum_probs=52.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|.++.++- -+.+++.|+|.-.... ...=.|+|....+.......- ++-
T Consensus 9 ~pP~~l~~~~-vt~tsi~vsW~pp~~~-----------i~~Y~I~y~~~~~~~~~~~~v------------------~~~ 58 (108)
T 2ee3_A 9 APPRHLGFSD-VSHDAARVFWEGAPRP-----------VRLVRVTYVSSEGGHSGQTEA------------------PGN 58 (108)
T ss_dssp CCSSCEEEES-CCSSCEEEEESCCSSC-----------CSEEEEEEEETTTCCBCCEEE------------------ETT
T ss_pred CCCceEEEEE-ccCCeEEEEeeCCCCC-----------ccEEEEEEEeCCCCceeEEEc------------------CCC
Confidence 3577777642 2478999999653211 123467777654322111100 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPASG 193 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~~~ 193 (552)
...+.|+||+|+|.|..+|.+-...+.|. ...|+|.+.+.
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~vP~ 100 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPS 100 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCCCC
T ss_pred cCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCCCC
Confidence 23678999999999999997654334343 34688874443
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.051 Score=44.89 Aligned_cols=89 Identities=21% Similarity=0.273 Sum_probs=50.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+++.-- +.+++.|+|.-... . ..=.|+|.......+... ... . .++.
T Consensus 11 ~P~~l~~~~~-~~~sv~lsW~~p~~----------~--~~Y~v~y~~~~~~~~~~~--~~~---~----------~~~~- 61 (104)
T 2dkm_A 11 PPRALTLAAV-TPRTVHLTWQPSAG----------A--THYLVRCSPASPKGEEEE--REV---Q----------VGRP- 61 (104)
T ss_dssp CCCCCEEEEE-CSSEEEEECCCCSS----------C--SEEEEEEEESSSCCSSCC--EEE---E----------ESSS-
T ss_pred CCceeEEEec-CCCEEEEEEeCCCC----------C--CeEEEEEEECCCCCCcce--EEE---e----------cCCC-
Confidence 5777766533 36899999954321 0 233566765433211100 000 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPASG 193 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~~~ 193 (552)
.+.|+||+|+|.|.++|........|. ...++|.|.+.
T Consensus 62 -~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~~ 101 (104)
T 2dkm_A 62 -EVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101 (104)
T ss_dssp -EEEEESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCSC
T ss_pred -EEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCCC
Confidence 788999999999999998654334443 45567776543
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.058 Score=43.73 Aligned_cols=88 Identities=19% Similarity=0.188 Sum_probs=52.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+.-. +.+++.|+|...... ...=.|+|.......... .... + ...
T Consensus 4 ~P~~l~v~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~y~~~~~~~~~~----~~~~----~---------~~~ 54 (98)
T 3teu_A 4 APTDLQVTNV-TDTSITVSWTPPSAT-----------ITGYRITYTPSNGPGEPK----ELTV----P---------PSS 54 (98)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSC-----------CSEEEEEEEETTSCSCCE----EEEE----C---------TTC
T ss_pred CCCceEEEEe-cCCEEEEEEeCCCCc-----------ccEEEEEEEECCCCCceE----EEEc----C---------CCc
Confidence 4777766533 368999999864311 123457777543221111 0000 0 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~ 191 (552)
..+.|+||+|+|.|.++|..-...+.|....+.+++.
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 55 TSVTITGLTPGVEYVVSVYALKDNQESPPLVGTQTTG 91 (98)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECS
T ss_pred CEEEecCCCCCCEEEEEEEEEeCCCCCCCeEEEeccC
Confidence 4678999999999999997665456666655555543
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.048 Score=45.59 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=53.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+... +.+++.|+|.-.....| + ...=.|+|........... ... ....
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~-------~-i~~Y~v~~~~~~~~~~~~~-------~~~----------~~~~ 73 (119)
T 2ed7_A 20 APRDVVPVLV-SSRFVRLSWRPPAEAKG-------N-IQTFTVFFSREGDNRERAL-------NTT----------QPGS 73 (119)
T ss_dssp CCSCCEEEEE-CSSCEEEECCCCSCCSS-------C-EEEEEEEEEESSCCCCEEE-------ECC----------CTTC
T ss_pred CCcceEEEec-CCCEEEEEEeCCCCCCC-------c-EEEEEEEEEeCCCCcceee-------Eee----------cCCc
Confidence 5777766543 47899999976432111 0 0123455655443222110 000 0113
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..+.|++|+|+|.|.+||..-+. ..+|+...++|.+..
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ed7_A 74 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES 114 (119)
T ss_dssp CEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCS
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 46788999999999999864332 357888899998654
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=95.69 E-value=0.068 Score=44.17 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=50.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCC-CceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|.++.+.- -+.+++.|+|.-.... ...=.|+|...... ...... . ++-
T Consensus 5 ~P~~l~v~~-~t~~sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~~-----v-------------~~~ 54 (104)
T 2rb8_A 5 APSQIEVKD-VTDTTALITWMPPSQP-----------VDGFELTYGIKDVPGDRTTID-----L-------------TED 54 (104)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCSSC-----------CSEEEEEEEETTCTTCCEEEE-----E-------------ETT
T ss_pred CCCccEEEE-ecCCeEEEEEcCCCCc-----------cceEEEEEEECcCCCceEEEE-----c-------------CCC
Confidence 577777653 3468999999754311 12335777654321 111110 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCC--CceEEEEcCCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAM--SDVYYFRTLPASG 193 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~--S~~~~F~T~p~~~ 193 (552)
...+.|+||+|||.|.++|..-...+. .....|+|.+...
T Consensus 55 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~~ 96 (104)
T 2rb8_A 55 ENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAAA 96 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC---
T ss_pred cCEEEeCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCcc
Confidence 236789999999999999965443222 2356688876543
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.011 Score=60.45 Aligned_cols=24 Identities=21% Similarity=0.480 Sum_probs=19.7
Q ss_pred HHHHHHHHHcCCcEEEEccccCce
Q 008826 390 VEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 390 ~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
+.+..++..++.++++.||+|.-+
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred HHHHHHHHHCCCcEEEECCCcccc
Confidence 456677888899999999999743
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.037 Score=45.89 Aligned_cols=38 Identities=24% Similarity=0.211 Sum_probs=30.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~ 193 (552)
.+.|+||+|+|.|.+||...+. ..+|+...|+|.+...
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred EEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 6788999999999999975432 3578889999987654
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.54 E-value=0.011 Score=60.23 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=25.1
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
.++.++||+|..... ...++.+.....+-+|++||+++
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VD 95 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCC
Confidence 368999999976421 22333332334578999999995
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.17 Score=41.38 Aligned_cols=79 Identities=19% Similarity=0.270 Sum_probs=47.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+.- -+.+++.|+|.-.... ...=.|+|...+....... ... .+-.
T Consensus 4 ~P~~l~~~~-~~~~sv~lsW~pP~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~~ 54 (100)
T 3b83_A 4 PPFNIKVTN-ITLTTAVVTWQPPILP-----------IEGILVTFGRKNDPSDETT----VDL-------------TSSI 54 (100)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCSSC-----------CSEEEEEEEESSCTTTCEE----EEE-------------CTTE
T ss_pred cCCccEEEE-ecCCEEEEEEcCCccc-----------CCEEEEEEEECCCCCCceE----EEE-------------CCcc
Confidence 577777654 3478999999754321 1234677765442211110 000 1124
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD 182 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~ 182 (552)
-.++|+||+|+|.|.+||...+..+.|+
T Consensus 55 t~~~i~~L~p~t~Y~~~V~A~n~~g~s~ 82 (100)
T 3b83_A 55 TSLTLTNLEPNTTYEIRIVARNGQQYSP 82 (100)
T ss_dssp EEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCC
Confidence 5788999999999999997655444444
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.12 Score=43.89 Aligned_cols=93 Identities=16% Similarity=0.183 Sum_probs=54.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+++... +.+++.|+|.......|. ...=.|+|........... .... ....
T Consensus 30 ~P~~l~~~~~-~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~---~~~~-------------~~~~ 84 (130)
T 1wfo_A 30 PPMGILFPEV-RTTSVRLIWQPPAAPNGI--------ILAYQITHRLNTTTANTAT---VEVL-------------APSA 84 (130)
T ss_dssp CCCCCEEEEE-CSSEEEEECCCCSCCCSC--------CCEEEEEEEESSCCCSCCC---EEEE-------------CTTC
T ss_pred CCCceEEEec-CCCEEEEEEcCCCCCCCc--------eEEEEEEEEECCCCCceEE---EEEe-------------CCCc
Confidence 5666666543 478999999764321111 1233566665432211000 0000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~ 192 (552)
..+.|++|+|+|.|.+||..-+.. .+|+...|+|.+..
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 125 (130)
T 1wfo_A 85 RQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRS 125 (130)
T ss_dssp CEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCC
T ss_pred eEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCC
Confidence 567889999999999999765432 45667789887654
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=95.31 E-value=0.11 Score=42.86 Aligned_cols=91 Identities=13% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCC--cCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccccc
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEF--QIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
..|..+.+..- +.+++.|+|..... ..|. ...=.|.|........... ...... +
T Consensus 6 ~~P~~~~~~~~-s~tsi~v~W~~p~~~~~ng~--------i~gY~v~y~~~~~~~~~~~--~~~~v~------~------ 62 (102)
T 3n1f_C 6 TGPHIAYTEAV-SDTQIMLKWTYIPSSNNNTP--------IQGFYIYYRPTDSDNDSDY--KRDVVE------G------ 62 (102)
T ss_dssp SCCEEEEEEEC-SSSCEEEEEECCC-----CC--------CCEEEEEEEETTCCCGGGC--EEEEEE------T------
T ss_pred CCCceeEEEEc-CCCEEEEEeECCChhhcCCc--------cceEEEEEEECCCCCCCce--EEEEEc------C------
Confidence 35777766433 36899999987532 1111 1233577876543210000 001110 1
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEc
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRT 188 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T 188 (552)
-..++.|++|+|+|.|.++|..-+. ...|....++|
T Consensus 63 -~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 63 -SKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp -TCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred -CceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 1124689999999999999864322 25666777776
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.071 Score=43.44 Aligned_cols=88 Identities=20% Similarity=0.246 Sum_probs=52.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCC-CceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+.+.-. ..+++.|+|..... .. ...=.|+|...... .+..+ . ...
T Consensus 10 ~P~~~~~~~~-~~~sv~l~W~~~~~---~~-------i~~Y~v~~~~~~~~~~~~~~-------------~------~~~ 59 (106)
T 2dju_A 10 PPIDLVVTET-TATSVTLTWDSGNS---EP-------VTYYGIQYRAAGTEGPFQEV-------------D------GVA 59 (106)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCCS---SC-------CSEEEEEEEETTCCSCCCCB-------------C------CCC
T ss_pred CCCCcEEEec-cCCEEEEEEcCCCC---CC-------ceEEEEEEEECCCCCCeEEc-------------c------CCC
Confidence 5777766543 36899999986421 10 12345667554432 11110 0 001
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
...+.|++|+|+|.|.|||...+. ..+|+...++|.+..
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 60 TTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp SSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred ccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 134678999999999999975443 257778889987653
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.04 Score=46.07 Aligned_cols=38 Identities=21% Similarity=0.233 Sum_probs=29.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~ 193 (552)
..+|+||+|+|.|.|||...+. ..+|+...++|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 4567899999999999965543 2577888999987654
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.097 Score=44.10 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=52.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+... +.+++.|+|.......+. ++ ...=.|+|........... . .+..
T Consensus 31 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~-----g~-i~~Y~v~~~~~~~~~~~~~------~-------------~~~~ 84 (124)
T 2ed9_A 31 PPQNVSLEVV-NSRSIKVSWLPPPSGTQN-----GF-ITGYKIRHRKTTRRGEMET------L-------------EPNN 84 (124)
T ss_dssp CCBSCCEEEE-ETTEEEEECBCCCTTTCC-----SC-CCEEEEEEEESSSSCCEEE------E-------------CSSC
T ss_pred CCeeeEEEEc-CCCEEEEEEECcCCcCCC-----cE-EeEEEEEEEECCCCcceEE------e-------------cCCc
Confidence 4666665433 368999999765431000 00 1233566665543322110 0 0122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
..+.|++|+|+|.|.+||..-+. ..+|+...|+|+.
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 85 LWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 46788999999999999975432 2578888898864
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.16 E-value=0.052 Score=45.11 Aligned_cols=88 Identities=22% Similarity=0.282 Sum_probs=52.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+++.- .+.+++.|+|..... | ....=.|+|............ ....
T Consensus 20 ~P~~l~~~~-~~~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~~~-------------------~~~~ 69 (115)
T 1x5z_A 20 QPLNFKAEP-ESETSILLSWTPPRS--D--------TIANYELVYKDGEHGEEQRIT-------------------IEPG 69 (115)
T ss_dssp CCEEEEEEC-SSSSEEEEEEECCSC--C--------CCCEEEECBEESSSCCCBCCE-------------------ECSS
T ss_pred CCccCEeee-CCCCEEEEEEcCCCC--C--------CccEEEEEEEeCCCCCceEEe-------------------cCCC
Confidence 577776643 347899999986432 1 012334555543322111000 0011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~ 192 (552)
..+.|+||+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 70 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 367789999999999999765432 47788899998654
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.069 Score=45.42 Aligned_cols=39 Identities=15% Similarity=0.045 Sum_probs=30.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~ 193 (552)
..++|++|+|+|.|.+||..-+. ..+|+...++|.+...
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~~ 120 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSG 120 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSCC
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCC
Confidence 35678999999999999964332 3678899999987543
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.17 Score=46.73 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=54.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+..... ++.|+|......-|.. ...=.|+|...+...+.... +... ..+..
T Consensus 11 ~P~~~~~~~~~~--s~~l~W~~p~~~~g~~-------i~~Y~v~~~~~~~~~~~~~~-----~~~~---------~~~~~ 67 (209)
T 2vkw_A 11 SPSIDQVEPYSS--TAQVQFDEPEATGGVP-------ILKYKAEWRAVGEEVWHSKW-----YDAK---------EASME 67 (209)
T ss_dssp CCEEEEEEECSS--CEEEEEECCSCCCSSC-------CCEEEEEEEESSCCCCEEEE-----EEHH---------HHHHH
T ss_pred CCcccEeeeccC--eEEEEEcCCCcCCCcc-------eeEEEEEEeeCCCCCceEeE-----eecc---------CCCcc
Confidence 588877755543 6999998753222211 12345777765543332111 0000 00112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
....|++|+|+|.|.|||...+. ..+|....++|.+.
T Consensus 68 ~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 68 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp SEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred ceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 36778999999999999965332 25677778998764
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.02 E-value=0.11 Score=43.39 Aligned_cols=94 Identities=18% Similarity=0.169 Sum_probs=55.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCC--cCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccc-ccc
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEF--QIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQN-YTS 151 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~-~~~ 151 (552)
.|..+.+... +.+++.|+|..... ..|. ...=.|+|.......... +. ... ...
T Consensus 18 ~P~~~~~~~~-~~~sv~l~W~~p~~~~~~g~--------i~~Y~v~~~~~~~~~~~~-------~~-------~~~~~~~ 74 (122)
T 1va9_A 18 PPMDVTLQPV-TSQSIQVTWKAPKKELQNGV--------IRGYQIGYRENSPGSNGQ-------YS-------IVEMKAT 74 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEECCCSSTTCSC--------CCEEEEEEEESSTTSCCS-------CB-------CCBCCCC
T ss_pred CCcceEEEec-cCCEEEEEEeCCCCcCCCCc--------EeEEEEEEEECCCCCCcc-------eE-------EEEEecC
Confidence 5777776433 47899999987543 1110 123356665544321110 00 000 012
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
+....+.|++|+|+|.|.+||..-+. ..+|+...|+|...
T Consensus 75 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 75 GDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp SSEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred CceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 23577889999999999999965432 25778888988764
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.32 Score=44.76 Aligned_cols=95 Identities=21% Similarity=0.230 Sum_probs=52.9
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-. +.+++.|+|.......+... .....=.|+|............. ...
T Consensus 6 ~~P~~l~~~~~-~~~si~l~W~~p~~~~~~~~----~~i~~Y~v~~~~~~~~~~~~~~~------------------~~~ 62 (211)
T 3p4l_A 6 MPPVGVQASIL-SHDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANTKYKNA------------------NAT 62 (211)
T ss_dssp CCCEEEEEEEC-SSSCEEEEEECTTSCTTCCC----CSSCEEEEEEEECC---CCCEEE------------------EES
T ss_pred CCCCCEEEEec-CCCeEEEEEeCCCCCccccc----CCCcEEEEEEEECCCCcceEEEe------------------CCC
Confidence 35778776433 37899999986321100000 00123456666543321111100 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
...+.|++|+|+|.|.++|..-+. ..+|....++|.+.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 246778999999999999864432 25677888999654
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.15 Score=42.44 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=28.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC--CCCCceEEEEcCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI--PAMSDVYYFRTLPASG 193 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~--~~~S~~~~F~T~p~~~ 193 (552)
..+.|+||+|||.|.++|..... ...+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCCC
Confidence 46889999999999999876432 2344567788877543
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=94.98 E-value=0.021 Score=57.23 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=24.7
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
+++++||+|..... .+.++.+.....+-++++||+++
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VD 94 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 94 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccC
Confidence 58999999976422 22333332345577999999995
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=94.97 E-value=0.029 Score=56.58 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+...+.++++++++++=||.-.
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq~~ 255 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHEVK 255 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEeceee
Confidence 35778889999999999999864
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.96 E-value=0.18 Score=41.20 Aligned_cols=86 Identities=14% Similarity=0.231 Sum_probs=49.1
Q ss_pred CceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEE
Q 008826 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIH 155 (552)
Q Consensus 76 P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 155 (552)
|. +.|... +.+++.|+|.......|. ...=.|+|.......+... ... ....
T Consensus 11 p~-~~v~~~-~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~-----~~~-------------~~~~ 62 (107)
T 2dn7_A 11 PT-MMISTT-AMNTALLQWHPPKELPGE--------LLGYRLQYCRADEARPNTI-----DFG-------------KDDQ 62 (107)
T ss_dssp CE-EEEEEC-STTEEEEEEECCSSCSSC--------CCEEEEEEEETTCSSCEEE-----EEE-------------TTCC
T ss_pred Cc-EeEEec-CCCEEEEEECCCCCCCCc--------eeEEEEEEEECCCCCCEEE-----EeC-------------CCcc
Confidence 44 455444 578999999875421111 1234577776554333221 000 1123
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCC---CCceEEEEcCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIPA---MSDVYYFRTLP 190 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~~---~S~~~~F~T~p 190 (552)
.++|++|+|+|.|.+||..-+..+ +|. ..|+|..
T Consensus 63 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 677899999999999997654332 333 4577754
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.95 E-value=0.04 Score=46.47 Aligned_cols=37 Identities=22% Similarity=0.095 Sum_probs=27.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..+|++|+|+|.|.|||...+. ..+|+...++|.+.+
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 5678999999999999975442 256777778887543
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=94.94 E-value=0.023 Score=58.16 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=25.0
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
+++++||+|..... .+.++.......+-++++||+++
T Consensus 71 pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VD 108 (357)
T 3ll8_A 71 PVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 108 (357)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSS
T ss_pred cceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccC
Confidence 58999999986421 22333322345678999999994
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.90 E-value=0.24 Score=44.59 Aligned_cols=76 Identities=16% Similarity=0.220 Sum_probs=45.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-. ..+++.|+|.......|.. ...=.|+|...+...+....... ..
T Consensus 8 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~~~~------------------~~ 61 (197)
T 3lpw_A 8 PPQDLKVKEV-TKTSVTLTWDPPLLDGGSK-------IKNYIVEKRESTRKAYSTVATNC------------------HK 61 (197)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSCCTTSC-------CCEEEEEEEETTCSSCEEEEEEE------------------CS
T ss_pred CCCCcEEEEe-cCCEEEEEEcCCccCCCCc-------ccEEEEEEEECCCCccEEeecCC------------------Cc
Confidence 5777766532 3689999998753221110 12345677765543332221110 11
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..+.|++|+|+|.|.|+|....
T Consensus 62 ~~~~~~~L~p~t~Y~~~V~a~~ 83 (197)
T 3lpw_A 62 TSWKVDQLQEGCSYYFRVLAEN 83 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEEc
Confidence 3567899999999999996544
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.038 Score=56.23 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+.....++++++++++=||.-.
T Consensus 237 ~~~~~~fl~~n~l~~IiR~Hq~~ 259 (335)
T 3icf_A 237 PDITDRFLRNNKLRKIFRSHELR 259 (335)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCC
T ss_pred HHHHHHHHHHCCCeEEEEcCcee
Confidence 35778899999999999999864
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.84 E-value=0.088 Score=47.66 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=49.5
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+. .-+.+++.|+|.-... + ...=.|+|........... ... +.
T Consensus 96 ~~P~~l~~~-~~~~~sv~l~W~~p~~----------~-i~~Y~v~~~~~~~~~~~~~-----~~~-------------~~ 145 (186)
T 1qr4_A 96 GSPKGISFS-DITENSATVSWTPPRS----------R-VDSYRVSYVPITGGTPNVV-----TVD-------------GS 145 (186)
T ss_dssp CCCSCEEEE-SCCSSCEEEEECCCSS----------C-CSEEEEEEEETTCCCCEEE-----EEE-------------TT
T ss_pred CCCCccEEE-EeCCCEEEEEEECCCC----------c-ccEEEEEEEeCCCCCceEE-----EcC-------------CC
Confidence 457776654 2346899999975321 1 1234567765543221111 100 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~ 191 (552)
...+.|+||+|+|.|.++|......+.|+ ...|+|.|.
T Consensus 146 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 146 KTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred cCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 24678899999999999997654334443 556777764
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.11 Score=44.27 Aligned_cols=38 Identities=21% Similarity=0.072 Sum_probs=29.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..++|+||+|+|.|.+||..-+. ..+|....++|....
T Consensus 79 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 119 (134)
T 2edx_A 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDV 119 (134)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCC
Confidence 56788999999999999864332 257788889997643
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.23 Score=41.21 Aligned_cols=88 Identities=15% Similarity=0.047 Sum_probs=53.4
Q ss_pred CCCceeEEeecC-CCCeEEEEEEcCCC---cCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccc
Q 008826 74 FEPEQLSVSLSF-NHDSIWITWITGEF---QIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNY 149 (552)
Q Consensus 74 ~~P~qi~l~~~~-~~~~~~V~W~T~~~---~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~ 149 (552)
..|..+.+.... +++++.|+|..... ..+ ....-.|+|...++..+..... .
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~--------~~l~Y~v~y~~~~~~~w~~~~~------------~---- 64 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPES--------FPLKFFLRYRPLILDQWQHVEL------------S---- 64 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTT--------TTBCEEEEEEESSSCCCCCEEE------------S----
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCc--------EEEEEEEEEEECCCCCcEEEec------------c----
Confidence 358888887643 46899999987542 111 0134568888765433221110 0
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCCC-----CCCCceEEEEc
Q 008826 150 TSGIIHHVRLTGLEPNNKYYYQCGDPSI-----PAMSDVYYFRT 188 (552)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~-----~~~S~~~~F~T 188 (552)
....+.|.+|+|||.|..||..... +.||....++|
T Consensus 65 ---~~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 65 ---NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp ---SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred ---cCCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 0125678999999999999976531 14555555554
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.64 E-value=0.43 Score=43.91 Aligned_cols=103 Identities=17% Similarity=0.139 Sum_probs=58.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+.-. ..+++.|+|..... . ....=.|+|...+........ .. ..-.
T Consensus 25 ~P~~l~~~~~-~~~sv~lsW~~p~~---~-------~i~~Y~v~~~~~~~~~~~~~~----~~-------------~~~~ 76 (203)
T 2gee_A 25 QPTDLSFVDI-TDSSIGLRWTPLNS---S-------TIIGYRITVVAAGEGIPIFED----FV-------------DSSV 76 (203)
T ss_dssp CCEEEEEECC-TTTCEEEEEECCSS---S-------SCCEEEEEEEESSSSSCCEEE----EE-------------ETTC
T ss_pred CCCccEEEec-CCCEEEEEecCCCC---C-------CccEEEEEEEECCCCCCceeE----Ec-------------CCCc
Confidence 4666655433 36899999987431 0 112345677665443221110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEeC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGD 206 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~~~~~~~~rfavigD 206 (552)
..+.|++|+|+|.|.++|..-...+.|....++|...+... ..+++...++
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P-~~l~~~~~~~ 127 (203)
T 2gee_A 77 GYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPP-TDLRFTNIGP 127 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCC-EEEEEEEEET
T ss_pred cEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCC-CceEEEEcCC
Confidence 36778999999999999976554466666666664433221 2355555554
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.28 Score=46.23 Aligned_cols=88 Identities=17% Similarity=0.198 Sum_probs=53.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-. +.+++.|+|.-.. |. ...=.|+|...++.......-. ..
T Consensus 7 ~~P~~l~~~~~-~~~si~l~W~~p~---g~--------i~~Y~v~~~~~~~~~~~~~~~~------------------~~ 56 (234)
T 3f7q_A 7 GAPQNPNAKAA-GSRKIHFNWLPPS---GK--------PMGYRVKYWIQGDSESEAHLLD------------------SK 56 (234)
T ss_dssp CCCEEEEEEEC-SSSCEEEEEECCS---SC--------CCEEEEEEEETTSCGGGCEEEE------------------ES
T ss_pred CCCcceEEEEc-CCCEEEEEEECCC---Cc--------cceEEEEEEECCCCccceEEEc------------------CC
Confidence 46888877543 3689999998642 11 1234577766543322111000 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
...+.|++|+|+|.|.++|..-+. ..+|....++|...
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~ 97 (234)
T 3f7q_A 57 VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQE 97 (234)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCC
Confidence 236778999999999999864332 24677888988753
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=94.62 E-value=0.046 Score=58.26 Aligned_cols=24 Identities=21% Similarity=0.202 Sum_probs=20.3
Q ss_pred HHHHHHHHHcCCcEEEEccccCce
Q 008826 390 VEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 390 ~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
+....+++++++++++.||.+.-+
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~ 410 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAE 410 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcC
Confidence 467788899999999999998644
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.14 Score=41.85 Aligned_cols=80 Identities=23% Similarity=0.287 Sum_probs=46.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.++ .-+.+++.|+|...... ...=.|+|.......... ..... +-.
T Consensus 4 ~P~~l~v~-~~t~~Sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~----~~~~~-------------~~~ 54 (98)
T 3tes_A 4 APKNLVVS-EVTEDSLRLSWTAPDAA-----------FDSFMIQYQESEKVGEAI----NLTVP-------------GSE 54 (98)
T ss_dssp CCEEEEEE-SCCSSCEEEEEECCTTS-----------CSEEEEEEEETTBCSCCE----EEEEE-------------TTC
T ss_pred CCCceEEE-ecCCCeEEEEecCCcCc-----------cceEEEEEEECCCCCceE----EEEcC-------------CCc
Confidence 47776664 23578999999864321 123457777654211110 00000 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCce
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDV 183 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~ 183 (552)
-.+.|+||+|+|.|.++|..-...+.|+.
T Consensus 55 t~~~l~gL~P~t~Y~~~V~A~~~~g~S~p 83 (98)
T 3tes_A 55 RSYDLTGLKPGTEYTVSIYGVKGGHRSNP 83 (98)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEBCC
T ss_pred CEEEECCCCCCCEEEEEEEEEeCCcccCC
Confidence 36789999999999999976553344443
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.19 Score=48.14 Aligned_cols=97 Identities=22% Similarity=0.196 Sum_probs=59.8
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCC-CCceEEEEEEEEeeeecccCCccccc
Q 008826 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNYT 150 (552)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~ 150 (552)
....|..+.+.....+.++.|+|.......+. + ..-.-.|+|..... ..+.....
T Consensus 112 KPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~-~-----~~L~YEVrYr~~~~~~~W~~v~~------------------ 167 (223)
T 3up1_A 112 KPEAPFDLSVVYREGANDFVVTFNTSHLQKKY-V-----KVLMHDVAYRQEKDENKWTHVNL------------------ 167 (223)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECGGGGCSS-S-----CCEEEEEEEEESSCSSCCEEEEE------------------
T ss_pred EcCCCcceEEEEEcCCCCEEEEECCCCCCCCc-c-----eeEEEEEEEEeCCCCCceEEEEe------------------
Confidence 33468999888877677899999986432110 0 01234678877642 22221100
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCC-------CCCCCceEEEEcCCCC
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPS-------IPAMSDVYYFRTLPAS 192 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~-------~~~~S~~~~F~T~p~~ 192 (552)
......+.|.+|+|+|.|..||.... -+.||....|+|++.+
T Consensus 168 ~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 168 SSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SSSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred cCceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 01123566789999999999985432 1257778999997653
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.54 E-value=0.21 Score=42.12 Aligned_cols=93 Identities=23% Similarity=0.255 Sum_probs=51.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCC-Cc---eEEEEEEEEeeeecccCCccccc
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LN---HEATGHSLVYDQLYPFEGLQNYT 150 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~---~~a~g~~~~y~~~~p~~g~~~~~ 150 (552)
.|.+++++-- +.+++.|+|...... ...=.|+|....+. .. ......... .+
T Consensus 11 ~p~~L~v~~~-T~~Si~LsW~~p~g~-----------v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~----v~-------- 66 (112)
T 2cui_A 11 RLSQLSVTDV-TTSSLRLNWEAPPGA-----------FDSFLLRFGVPSPSTLEPHPRPLLQRELM----VP-------- 66 (112)
T ss_dssp CCCCCEEESC-CSSCEEEECCCCTTS-----------CSEEEEEEECCCCSSSCCCSSCCCCEEEE----EE--------
T ss_pred CCCceEEEee-cCCeEEEEECCCCCC-----------ccEEEEEEEeCCCCccccccccCcceEEE----cC--------
Confidence 4666665432 478999999753321 12456788765432 00 000000000 00
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCCC
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPAS 192 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~~ 192 (552)
+-...++|+||+|+|.|..+|..-.....|. ....+|.+.+
T Consensus 67 -~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 67 -GTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp -TTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred -CCcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 1123789999999999999997654334442 4566776644
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.50 E-value=0.14 Score=43.11 Aligned_cols=77 Identities=23% Similarity=0.344 Sum_probs=43.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCC-CCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSR-TNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~-~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+.+.-- ..+++.|+|.-.. . |.. | ...=.|+|.... ...+..+... . .+.
T Consensus 20 ~P~~~~~~~~-~~~sv~l~W~p~~-~-~~~-----~-i~~Y~v~~~~~~~~~~w~~~~~~-------~---------~~~ 74 (121)
T 1x4z_A 20 APDRPTISTA-SETSVYVTWIPRG-N-GGF-----P-IQSFRVEYKKLKKVGDWILATSA-------I---------PPS 74 (121)
T ss_dssp CCCCCEEEEC-CSSEEEEECCCCC-C-TTS-----C-CCEEEEEEEESSSCCCCEEEEEE-------E---------CTT
T ss_pred cCCCCEEEEc-cCCEEEEEEECCC-C-CCC-----c-ceEEEEEEEECCCCCceEEeecc-------c---------CCC
Confidence 4666655432 3689999998422 1 110 0 123457777654 2223222110 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
...++|++|+|+|.|.|||...+
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEc
Confidence 24677899999999999997554
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.50 E-value=0.29 Score=40.26 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=50.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-- +.+++.|+|.-.... ...=.|+|...... ... ... .+-.
T Consensus 10 ~P~~l~v~~~-~~~sv~lsW~~p~~~-----------i~~Y~i~y~~~~~~-~~~-----~~~-------------~~~~ 58 (105)
T 2cum_A 10 APRDLEAKEV-TPRTALLTWTEPPVR-----------PAGYLLSFHTPGGQ-TQE-----ILL-------------PGGI 58 (105)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEECTTSC-EEE-----EEE-------------CSSC
T ss_pred CCCceEEEec-cCCEEEEEEcCCCCc-----------cceEEEEEEeCCCc-eEE-----EEE-------------CCCc
Confidence 5777665432 368999999754311 12335777654331 110 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC--ceEEEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S--~~~~F~T~p~ 191 (552)
..+.|+||+|+|.|.++|..-...+.| ....|+|...
T Consensus 59 ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 59 TSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCCS
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCCc
Confidence 467899999999999999764433333 4667888654
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.14 Score=43.99 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=27.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC--CCCceEEEEcCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIP--AMSDVYYFRTLPA 191 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~--~~S~~~~F~T~p~ 191 (552)
..+|+||+|+|.|.|||.+-+.. ..|+...++|.+.
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 45778999999999999755422 4567788888764
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.21 Score=42.30 Aligned_cols=94 Identities=15% Similarity=0.081 Sum_probs=51.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecC---CCCCceEEEEEEEEeeeecccCCcccccc
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTS---RTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~---~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
.|..+.+.- -..+++.|+|.-... -|.. ...=.|+|... ....+..+.... . .
T Consensus 20 ~P~~l~~~~-~~~~sv~l~W~p~~~-~~~~-------i~~Y~v~~~~~~~~~~~~w~~~~~~~------~---------~ 75 (124)
T 1wis_A 20 PPTNLGISN-IGPRSVTLQFRPGYD-GKTS-------ISRWLVEAQVGVVGEGEEWLLIHQLS------N---------E 75 (124)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCCC-CSSC-------CSEEEEEECBSCCSTTSCCEEEEEEE------S---------C
T ss_pred cCCCCEEEE-ecCCEEEEEEECCCC-CCCc-------ccEEEEEEEECCCCCCCCCeEeeeEc------c---------C
Confidence 577766643 346899999954321 1111 12346777762 222222111000 0 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCCC---CCCce-EEEEcCCCC
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSIP---AMSDV-YYFRTLPAS 192 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~-~~F~T~p~~ 192 (552)
.....++|++|+|+|.|.|||...+.. .+|.. ..++|.+.+
T Consensus 76 ~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 76 PDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 112367889999999999999765432 33442 457777653
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.45 E-value=0.12 Score=43.53 Aligned_cols=81 Identities=11% Similarity=0.133 Sum_probs=46.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-- ..+++.|+|......-|.. ...=.|+|.......+..+.. . ...
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~gg~~-------i~~Y~v~~~~~~~~~w~~~~~-----------~-------~~~ 73 (120)
T 2yux_A 20 PPQIVKIEDV-WGENVALTWTPPKDDGNAA-------ITGYTIQKADKKSMEWFTVIE-----------H-------YHR 73 (120)
T ss_dssp CCSCEEEEEE-ETTEEEEEECCCSCCCSSC-------CCCCCEEEEETTTCCCEEEES-----------S-------CCS
T ss_pred cCCCCEEEEe-cCCEEEEEEcCCCcCCCCC-------ceEEEEEEEECCCCceEEeee-----------c-------CCc
Confidence 5776655422 3679999997643211110 123357777655433322110 0 011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
..+.|++|+|++.|.|||...+..+.+
T Consensus 74 ~~~~v~~L~p~t~Y~frV~A~n~~G~s 100 (120)
T 2yux_A 74 TSATITELVIGNEYYFRVFSENMCGLS 100 (120)
T ss_dssp SCCEECCCCSSEEEEEEECCCSSSCSC
T ss_pred CEEEECCCCCCCEEEEEEEEeeCCcCC
Confidence 245789999999999999876543444
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.43 E-value=0.14 Score=42.72 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=28.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
.+.|++|+|+|.|.|||...+. ..+|+...|+|.+.+
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 4578999999999999865432 357788889987653
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.38 E-value=0.16 Score=43.00 Aligned_cols=38 Identities=24% Similarity=0.339 Sum_probs=29.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..++|++|+|+|.|.+||.+-+. ..+|....|+|.|..
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCC
Confidence 36788999999999999975432 257788888887754
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.33 E-value=0.33 Score=38.73 Aligned_cols=36 Identities=19% Similarity=0.127 Sum_probs=25.7
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~ 189 (552)
...+.|+||+|||.|.++|..-...+.|. ...++|.
T Consensus 54 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 54 EDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp CCEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEECC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeEEEec
Confidence 35788999999999999998765434443 3445554
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.28 E-value=0.15 Score=42.54 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=29.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..+.|++|+|+|.|.+||..-+. ..+|+...|+|.+..
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 116 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCC
Confidence 46789999999999999964332 257888899997643
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.25 E-value=0.1 Score=44.44 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=29.8
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~ 191 (552)
...+.|++|+|+|.|.+||...+.. .+|+...|+|.+.
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 3567889999999999998754422 5788889999764
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.16 E-value=0.25 Score=39.10 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=22.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC----CCCceEEEEc
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIP----AMSDVYYFRT 188 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~----~~S~~~~F~T 188 (552)
...+++|+||++|+|+|..-+.. ..|....++|
T Consensus 52 ~~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 52 TATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 45679999999999999754321 2344555544
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=94.13 E-value=0.23 Score=41.32 Aligned_cols=88 Identities=17% Similarity=0.167 Sum_probs=47.1
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+..+.....+++.++|..... ......|......-.....+... . ..
T Consensus 6 ~aP~~l~a~~~~~~~~v~LsW~~~~~-------------~~~Y~VyR~~~~~~~~~~i~~~~--~-------------~t 57 (103)
T 3mpc_A 6 AFPTGLSAVLDSSGNTANLTWNAAPG-------------ANSYNVKRSTKSGGPYTTIATNI--T-------------ST 57 (103)
T ss_dssp CCCEEEEEEECTTSCCEEEEEECCTT-------------CSEEEEEEESSTTCCCEEEEEEE--C-------------SS
T ss_pred CCCceeEEEEeCCCCEEEEEEECCCC-------------CCEEEEEEecCCCCCcEEEeecC--C-------------CC
Confidence 35888776654445789999987432 12334444332111111111100 0 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
....++|++|++|+|+|..-+. +..|...+.++...
T Consensus 58 --sy~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~~~ 96 (103)
T 3mpc_A 58 --NYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPKL 96 (103)
T ss_dssp --EEEETTCCTTCCCEEEEEEEETTEECCCCCCEECBCCCC
T ss_pred --EEEECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECCcc
Confidence 2234799999999999975332 24556666655443
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=94.13 E-value=0.37 Score=44.52 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=56.9
Q ss_pred CCCCceeEEeecC---CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccc
Q 008826 73 GFEPEQLSVSLSF---NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNY 149 (552)
Q Consensus 73 ~~~P~qi~l~~~~---~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~ 149 (552)
...|..+.+.... .++++.|+|.......... +-....=.|+|....+..+... ..
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~----g~~~~~Y~v~y~~~~~~~~~~~------~~----------- 161 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT----GWFTLLYEIRLKPEKAAEWEIH------FA----------- 161 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTT----SSCCEEEEEEEECTTCSSCEEE------EE-----------
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCccccC----CeEEEEEEEEEecCCCCCCEEE------ec-----------
Confidence 3568888877643 4689999998753211000 0001234577776554333211 00
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCC---C-CCCCceEEEEcCC
Q 008826 150 TSGIIHHVRLTGLEPNNKYYYQCGDPS---I-PAMSDVYYFRTLP 190 (552)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Y~v~~~~---~-~~~S~~~~F~T~p 190 (552)
+....+.|.+|+|+|.|..||.... . +.||+...|+|+.
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 0113577899999999999986432 1 3688899999953
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.09 E-value=0.062 Score=44.73 Aligned_cols=38 Identities=37% Similarity=0.494 Sum_probs=31.5
Q ss_pred EEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCCC
Q 008826 157 VRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGP 194 (552)
Q Consensus 157 v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~~ 194 (552)
+.|+||+|+|.|.+||...+. ..+|+...|+|.+.+++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 889999999999999975432 36888899999987665
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=94.08 E-value=0.35 Score=44.72 Aligned_cols=93 Identities=13% Similarity=0.077 Sum_probs=56.2
Q ss_pred CCCCceeEEeecC-----CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEe-cCCCCCceEEEEEEEEeeeecccCCc
Q 008826 73 GFEPEQLSVSLSF-----NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYG-TSRTNLNHEATGHSLVYDQLYPFEGL 146 (552)
Q Consensus 73 ~~~P~qi~l~~~~-----~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~a~g~~~~y~~~~p~~g~ 146 (552)
...|..+.+.... ..+++.|+|..... .|. + ...=.|+|. ..++..+..+.-.
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~-~------~l~Y~v~y~~~~~~~~w~~~~~~------------- 167 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEY-M------EQECELRYQPQLKGANWTLVFHL------------- 167 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-S------CEEEEEEEEESSTTCCCEEEEEE-------------
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCe-E------EEEEEEEEccCCCCCCcEEEecc-------------
Confidence 3468877665542 47889999986542 111 0 013467887 5544333322100
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEecCCC------CCCCceEEEEcCC
Q 008826 147 QNYTSGIIHHVRLTGLEPNNKYYYQCGDPSI------PAMSDVYYFRTLP 190 (552)
Q Consensus 147 ~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~------~~~S~~~~F~T~p 190 (552)
.+....+.|.+|+|+|.|.+||..... +.||+...|+|+.
T Consensus 168 ----~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 ----PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ----ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred ----cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 012356789999999999999864321 2578888999875
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.08 E-value=0.042 Score=58.76 Aligned_cols=22 Identities=9% Similarity=0.076 Sum_probs=19.5
Q ss_pred HHHHHHHHHcCCcEEEEccccC
Q 008826 390 VEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 390 ~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
+.+.++++++++++++-||.-.
T Consensus 263 d~v~~FL~~n~l~lIIRaHq~v 284 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHEAQ 284 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHcCCcEEEEccchh
Confidence 5778899999999999999874
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.05 E-value=0.22 Score=41.59 Aligned_cols=86 Identities=13% Similarity=0.026 Sum_probs=49.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++++.-- +.+++.|+|.-.... ...=.|+|....... .. ... .+-.
T Consensus 10 ~P~~l~~~~~-t~~sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~-~~-----~~v-------------~~~~ 58 (115)
T 2cuh_A 10 GPTQLRALNL-TEGFAVLHWKPPQNP-----------VDTYDIQVTAPGAPP-LQ-----AET-------------PGSA 58 (115)
T ss_dssp SCEEEECCCC-SSSCEEEEEECCSSC-----------CSEEEEEEECSSSCC-EE-----EEE-------------ETTC
T ss_pred CCcceEEEec-cCCeEEEEEECCCCC-----------ccEEEEEEEcCCCCc-EE-----EEE-------------CCCc
Confidence 4676655332 368999999753211 123357776543211 10 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC--CCceEEEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPA--MSDVYYFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~--~S~~~~F~T~p~ 191 (552)
..+.|+||+|+|.|.++|..-.... ......|+|.+.
T Consensus 59 t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 59 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp SEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCC
T ss_pred cEEEEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCC
Confidence 3678999999999999997543222 234567888754
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.03 E-value=0.22 Score=42.66 Aligned_cols=37 Identities=27% Similarity=0.266 Sum_probs=29.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~ 192 (552)
.++|+||+|+|+|.+||.+.+.. .+|+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 47789999999999999765533 46778899998753
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=93.79 E-value=0.4 Score=44.11 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=27.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
...|+||+|+|.|.|||..-+. +.+|+...++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 5678999999999999965432 2577888888864
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.79 E-value=0.12 Score=43.44 Aligned_cols=38 Identities=29% Similarity=0.236 Sum_probs=29.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~ 192 (552)
..+.|+||+|+|.|.+||..-+.. .+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCC
Confidence 467889999999999998654322 46778889997643
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.77 E-value=0.098 Score=43.36 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=42.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-. +.+++.|+|.-....-|.. ...=.|+|...+...+.... . .....
T Consensus 11 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~w~~~~----------~-------~~~~~ 65 (111)
T 1x5y_A 11 APQHLTVEDV-TDTTTTLKWRPPDRIGAGG-------IDGYLVEYCLEGSEEWVPAN----------K-------EPVER 65 (111)
T ss_dssp CCEEEEEEEE-CSSEEEEEEECCSCCCSSC-------CCEEEEEEEETTCCCCEESS----------S-------SCBSS
T ss_pred CCCCCEEEec-cCCEEEEEECCCCcCCCCc-------ccEEEEEEEECCCCceEEcc----------c-------cCCcc
Confidence 5777666433 3689999998654211100 12335666554432221100 0 00112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..++|++|+|+|.|.|||..-+
T Consensus 66 ~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 66 CGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SEEEEECCCTTCCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEc
Confidence 3567899999999999997654
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.76 E-value=0.098 Score=43.22 Aligned_cols=22 Identities=18% Similarity=0.354 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
...+|++|+|++.|.|||...+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKAVN 86 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEEEc
Confidence 3567899999999999997654
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=93.75 E-value=0.15 Score=47.13 Aligned_cols=95 Identities=17% Similarity=0.112 Sum_probs=55.0
Q ss_pred CCCceeEEeec-CCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 74 FEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 74 ~~P~qi~l~~~-~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
..|..+.+... .+.+++.|+|......-|. ...=.|+|.......+.... .. ...+
T Consensus 105 ~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~~~~~~----------~~-----~~~~ 161 (215)
T 1bqu_A 105 NPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP----------PE-----DTAS 161 (215)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECC----------GG-----GGCS
T ss_pred CCCCceEEEEecCCCceEEEEEeCCCCCCcc--------eEEEEEEEccCCCCCceEec----------cc-----cccC
Confidence 46788777653 3578999999865432110 01235666655432221100 00 0011
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC------CCCCceEEEEcCCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSI------PAMSDVYYFRTLPA 191 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~------~~~S~~~~F~T~p~ 191 (552)
....++|++|+|+|.|.+||..... ..||+...++|.+.
T Consensus 162 ~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 162 TRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp CCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred ccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 2346788999999999999865421 24777888998754
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.73 E-value=0.15 Score=42.35 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=24.8
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CCCceEE-EEcCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYY-FRTLPA 191 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~-F~T~p~ 191 (552)
.+.|++|+|+|.|.|||...+.. .+|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 56789999999999999765432 2344333 666654
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=93.58 E-value=0.33 Score=39.63 Aligned_cols=74 Identities=20% Similarity=0.238 Sum_probs=43.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCC-CceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+++.-- +.+++.|+|..... .|. ...=.|+|...... ..... . .+ +-
T Consensus 7 ~P~~l~v~~~-t~~Sv~l~W~~p~~-~~~--------i~~Y~v~y~~~~~~~~~~~~-----~----v~---------~~ 58 (101)
T 3k2m_C 7 VPTKLEVVAA-TPTSLLISWDAPMS-SSS--------VYYYRITYGETGGNSPVQEF-----T----VP---------YS 58 (101)
T ss_dssp SSCEEEEEEE-ETTEEEEEECCCCT-TSC--------CCEEEEEEEETTCSSCCEEE-----E----EE---------TT
T ss_pred CCcceEEeec-CCCEEEEEecCCCC-CCc--------eeeEEEEEEECCCCCccEEE-----E----cC---------CC
Confidence 5777776533 46899999976431 010 12235777765432 11111 0 01 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
...++|+||+|+|.|.++|..-.
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 24788999999999999987554
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=93.45 E-value=0.18 Score=49.55 Aligned_cols=95 Identities=17% Similarity=0.125 Sum_probs=56.2
Q ss_pred CCCCceeEEeec-CCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccccc
Q 008826 73 GFEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 73 ~~~P~qi~l~~~-~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
...|..+.+... .+++++.|+|......-|. ...=.|+|...+...+..+. .. + ..
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~w~~~~----------~~----~-~~ 256 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP----------PE----D-TA 256 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECC----------GG----G-GC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcc--------cEEEEEEEEeCCCCCceEEc----------cc----c-CC
Confidence 346888777643 3578999999875432110 01235677665433222110 00 0 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------CCCCceEEEEcCC
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSI------PAMSDVYYFRTLP 190 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~------~~~S~~~~F~T~p 190 (552)
.....+.|++|+|+|.|.+||...+. +.||+...|+|+.
T Consensus 257 ~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 257 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 12246788999999999999864321 2567888999864
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.42 E-value=0.24 Score=41.59 Aligned_cols=70 Identities=11% Similarity=0.162 Sum_probs=40.0
Q ss_pred CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEEEEEeCCCCCC
Q 008826 86 NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPN 165 (552)
Q Consensus 86 ~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~ 165 (552)
+.+++.|+|......-|.. ...=.|+|...++..+..+.. .. ...-..+|+||+|+
T Consensus 23 ~~~sv~L~W~~P~~~gg~~-------i~~Y~Ve~~~~~~~~w~~~~~-----------~~------~~~~~~~v~~L~p~ 78 (112)
T 1bpv_A 23 TRHTVTLKWAKPEYTGGFK-------ITSYIVEKRDLPNGRWLKANF-----------SN------ILENEFTVSGLTED 78 (112)
T ss_dssp ETTEEEEECCCCSCCTTCC-------CSCCEEEEEETTSCCCEECCC-----------SC------CCSSEEEECSCCSS
T ss_pred eCCEEEEEECCCCcCCCCc-------ccEEEEEEEECCCCceEEeec-----------cc------CccCEEEECCCCCC
Confidence 3689999998432211111 123467887655433322100 00 01124678999999
Q ss_pred CEEEEEEecCCCCC
Q 008826 166 NKYYYQCGDPSIPA 179 (552)
Q Consensus 166 T~Y~Y~v~~~~~~~ 179 (552)
|.|.|||.+.+..+
T Consensus 79 t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 79 AAYEFRVIAKNAAG 92 (112)
T ss_dssp CCEEEEEEEECTTS
T ss_pred CEEEEEEEEEECCC
Confidence 99999998765434
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.31 E-value=0.3 Score=40.97 Aligned_cols=92 Identities=12% Similarity=0.023 Sum_probs=54.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.- ..+++.++|.-.... +. | ...=+|+|.. .+..+..+... + + +-
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~~-~~------~-I~gY~vey~~-~~~~W~~~~~~---~----~---------~~ 61 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPELV-PK------R-LDGYVLEGRQ-GSQGWEVLDPA---V----A---------GT 61 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSCC-SS------C-CCBEEEEEEE-TTCCCEEEEEE---E----C---------SS
T ss_pred CCCcceEEEE--eCCEEEEEECCCCCC-CC------C-CcEEEEEEEe-CCCCcEEeeee---c----C---------CC
Confidence 3577777754 357899999986531 11 1 1234678877 33334322211 1 0 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~ 192 (552)
..+..|.+|+|+++|.+||.+-+.. ..|+...++|....
T Consensus 62 ~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~ 103 (108)
T 1v5j_A 62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLS 103 (108)
T ss_dssp CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCS
T ss_pred cCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCcc
Confidence 2356789999999999999654422 35566666665443
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=93.16 E-value=0.32 Score=44.80 Aligned_cols=94 Identities=18% Similarity=0.230 Sum_probs=54.6
Q ss_pred CCCceeEEeecC-CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 74 FEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 74 ~~P~qi~l~~~~-~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
..|..+.+.... +.+++.|+|.-.....|. ...=.|+|............ .... .+
T Consensus 107 ~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~--~~~~-------------~~ 163 (211)
T 3p4l_A 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGK--------ITGYIIYYSTDVNAEIHDWV--IEPV-------------VG 163 (211)
T ss_dssp SCCEEEEEEEETTEEEEEEEEEECCTTCCSC--------CCEEEEEEESCTTSCGGGSE--EEEE-------------ES
T ss_pred CCCcceEEEecCCCCCEEEEEECCCCCCCCC--------EEEEEEEEEECCCCCCCceE--EEEe-------------cC
Confidence 367888776654 368999999864321111 12235667655433211000 0000 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
....+.|++|+|+|.|.++|..-+. +.+|+...|+|..
T Consensus 164 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 164 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp SCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 1246788999999999999964432 3677888888764
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=93.06 E-value=0.46 Score=44.83 Aligned_cols=92 Identities=12% Similarity=0.105 Sum_probs=55.8
Q ss_pred CCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 73 GFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 73 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
...|..|++......+++.|+|...... +.. ..-.-.|+|...++..+.... .. . .
T Consensus 122 p~pP~~l~~~~~~~~~~l~v~W~~P~~~------~~~-~~l~Yev~y~~~~~~~w~~~~---~~-------~-------~ 177 (227)
T 1eer_B 122 LDAPVGLVARLADESGHVVLRWLPPPET------PMT-SHIRYEVDVSAGQGAGSVQRV---EI-------L-------E 177 (227)
T ss_dssp CCCCEEEEEEECSSTTCEEEEEECCSSC------SCG-GGEEEEEEEECCSSSCCCCEE---EE-------C-------T
T ss_pred cCcCcceEEEEcCCCCeEEEEEcCCCCc------ccc-cceEEEEEEEcCCCCCcEEEE---EE-------e-------c
Confidence 3568888887654578999999875321 000 011346777765433222100 00 0 0
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC--------CCCCceEEEEc
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSI--------PAMSDVYYFRT 188 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~--------~~~S~~~~F~T 188 (552)
....+.|.+|+|||.|..||..... +.||....|+|
T Consensus 178 ~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 178 GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp TCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred CceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 1236778999999999999864421 36888888998
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=92.94 E-value=0.41 Score=45.13 Aligned_cols=96 Identities=20% Similarity=0.181 Sum_probs=56.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+++.... .+++.|+|......... + ..-.-.|+|...+.. +..+... .. ...
T Consensus 107 ~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~-----~-~~l~Yevry~~~~~~-w~~~~~~--~~-------------~~~ 163 (214)
T 2b5i_B 107 MAPISLQVVHVE-THRCNISWEISQASHYF-----E-RHLEFEARTLSPGHT-WEEAPLL--TL-------------KQK 163 (214)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGGG-----T-TCEEEEEEEECTTSC-STTSCCE--EE-------------CSC
T ss_pred CCCceEEEEEec-CCeEEEEECCCCccccC-----C-CceEEEEEEecCCCC-hheeeee--ee-------------ccc
Confidence 568888887654 47899999875421000 0 001345777765431 1111000 00 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC-------CCCCceEEEEcCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI-------PAMSDVYYFRTLPAS 192 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~-------~~~S~~~~F~T~p~~ 192 (552)
.+.+.|.+|+|||.|..||..... +.||....|+|.+..
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 357788999999999999864421 378889999998754
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.85 E-value=1 Score=43.21 Aligned_cols=103 Identities=20% Similarity=0.147 Sum_probs=56.9
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+... +.+++.|+|...... ...=.|+|............ ... + .+-
T Consensus 106 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~~-----~~~--------~--~~~ 158 (283)
T 1tdq_A 106 DAPKNLRVGSR-TATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVL-----VPK--------G--IGP 158 (283)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEE-----EEC--------C--SSS
T ss_pred CCCCceEEEec-CCCeEEEEecCCCCC-----------ccEEEEEEEeCCCCcceEEE-----CCC--------C--Ccc
Confidence 45777765432 478999999875311 12345777655432221110 000 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCCCCCCCCceEEEEEeC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPASGPQSYPKRIAIVGD 206 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~~~~~~~~~rfavigD 206 (552)
...+.|++|+|+|.|.++|..-...+.|. ...+.|.|.+. ..+++..+++
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~P---~~l~~~~~~~ 210 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSP---RDLMVTASSE 210 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCC---EEEEEEEECS
T ss_pred cceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCCC---CccEEeEecC
Confidence 46788999999999999997654334454 34455554321 1355555444
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.83 E-value=0.57 Score=39.82 Aligned_cols=74 Identities=20% Similarity=0.300 Sum_probs=44.5
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.- -+.+++.|+|.-.... ...=.|+|.......... . ... + +-
T Consensus 30 ~~P~~l~v~~-~t~~Si~lsW~~p~~~-----------i~~Y~V~y~~~~~~~~~~---~-~~v----~---------~~ 80 (121)
T 2ocf_D 30 DVPTKLEVVA-ATPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQ---E-FTV----P---------GS 80 (121)
T ss_dssp CSCEEEEEEE-ECSSCEEEEEECCSSC-----------CCEEEEEEEETTTCSCBE---E-EEE----E---------TT
T ss_pred CCCCccEEEe-cCCCEEEEEEcCCCCC-----------CcEEEEEEEECCCCCccE---E-EEe----C---------CC
Confidence 4588877754 3478999999764321 123456676654322110 0 000 0 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
...+.|+||+|+|.|.++|..-.
T Consensus 81 ~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 81 KSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp CCEEEECCCCTTCEEEEEEEEEC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 24678999999999999998654
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.74 E-value=0.51 Score=46.53 Aligned_cols=94 Identities=14% Similarity=-0.051 Sum_probs=56.7
Q ss_pred CCCCceeEEeecC-----CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEe-cCCCCCceEEEEEEEEeeeecccCCc
Q 008826 73 GFEPEQLSVSLSF-----NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYG-TSRTNLNHEATGHSLVYDQLYPFEGL 146 (552)
Q Consensus 73 ~~~P~qi~l~~~~-----~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~a~g~~~~y~~~~p~~g~ 146 (552)
...|..+.+.... .++++.|+|..... .|. ..-.=.|+|. ..+...+..+...
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~-------~~l~Y~v~y~~~~~~~~w~~~~~~------------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLH-------INQKCELRHKPQRGEASWALVGPL------------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-------SCEEEEEEEEESSSCCCCEEEEEE-------------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCC-CCc-------eeEEEEEEEccCCCCCCcEEcccc-------------
Confidence 3467777665432 46899999987532 111 0124568887 5544333322110
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEecCCC---C---CCCceEEEEcCCC
Q 008826 147 QNYTSGIIHHVRLTGLEPNNKYYYQCGDPSI---P---AMSDVYYFRTLPA 191 (552)
Q Consensus 147 ~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~---~---~~S~~~~F~T~p~ 191 (552)
....+.+.|.+|+|+|.|..||..... . .||+...++|+..
T Consensus 262 ----~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 ----PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp ----CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred ----cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 112467889999999999999874321 2 4778889998754
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=92.66 E-value=0.91 Score=43.89 Aligned_cols=90 Identities=17% Similarity=0.079 Sum_probs=52.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-. .++++.|+|...... ...=.|+|........... ... ..-
T Consensus 22 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~----~~~-------------~~~ 72 (290)
T 3r8q_A 22 PAPTDLKFTQV-TPTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKE----INL-------------APD 72 (290)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSSC-----------CCEEEEEEEESSSSSCCEE----EEE-------------CTT
T ss_pred CCCCceEEEEC-CCCEEEEEEeCCCCC-----------eeEEEEEEEeCCCCCceEE----EEc-------------CCC
Confidence 46888776543 378999999875311 1234577766543221110 000 012
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCC--ceEEEEcCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S--~~~~F~T~p~~ 192 (552)
...+.|++|+|+|.|.++|..-...+.+ ....++|.+.+
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~ 113 (290)
T 3r8q_A 73 SSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV 113 (290)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC
Confidence 3467889999999999998754432222 24567776544
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.61 E-value=0.86 Score=38.23 Aligned_cols=23 Identities=17% Similarity=0.291 Sum_probs=19.3
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
...++|++|+|+|.|.+||.+.+
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 35688999999999999997554
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.47 E-value=0.48 Score=40.40 Aligned_cols=38 Identities=18% Similarity=0.034 Sum_probs=29.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..+.|+||+|+|.|.++|..-+. ...|+...|+|+...
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence 57889999999999999864332 367888999997653
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=92.46 E-value=0.51 Score=47.29 Aligned_cols=93 Identities=11% Similarity=0.058 Sum_probs=54.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-..+..++.|+|..... + ....=.|+|....+....... ..+ .+.
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~--------~i~~Y~v~~~~~~~~~~~~~~---~~~-------------~~~ 56 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HAD 56 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSC--S--------SCCEEEEEEEETTTCSSCCEE---EEE-------------CTT
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCC--C--------CceEEEEEEEECCCCCCceeE---EEe-------------cCC
Confidence 35888887754434579999987531 1 112346777765443221110 000 012
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPAS 192 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p~~ 192 (552)
...+.|++|+|+|.|.|+|......+.|...+..+.+.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~ 95 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAV 95 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCC
Confidence 246789999999999999976544455655555555443
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.39 E-value=0.72 Score=38.16 Aligned_cols=22 Identities=27% Similarity=0.465 Sum_probs=18.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..+.|++|+|+|.|.+||...+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEc
Confidence 4677899999999999997654
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.39 E-value=0.76 Score=37.27 Aligned_cols=86 Identities=19% Similarity=0.213 Sum_probs=53.6
Q ss_pred CCceeEEeecC-CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCC-CceEEEEEEEEeeeecccCCccccccC
Q 008826 75 EPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 75 ~P~qi~l~~~~-~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
-|-|+.++-+. .|++-.|.|..... .|+ ..-.+.|...... .++.+. .++
T Consensus 7 gpa~v~is~~~s~pdsh~iqW~~~s~------s~I----~eyiL~~R~k~~~g~Wke~~------------------Ip~ 58 (98)
T 1oww_A 7 GPVEVFITETPSQPNSHPIQWNAPQP------SHI----SKYILRWRPKNSVGRWKEAT------------------IPG 58 (98)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSS------SCE----EEEEEEEEETTCSSCCEEEE------------------ECS
T ss_pred cceEEEecCCCCCCCccceEEecCCC------CCc----eEEEEEEEEcCCCCceeEEE------------------ecC
Confidence 47888886654 47999999998653 110 1223444544332 122211 123
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEc
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T 188 (552)
.+..-+|+||+||.+|.=+|-+...-+|++ .+.|.|
T Consensus 59 h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 59 HLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp SCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred ccceEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 456678999999999999998765446766 566665
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.37 E-value=0.069 Score=47.12 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=30.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..++|+||+|+|.|..||.+-.. ...|....|+|++..
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~ 122 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCC
Confidence 47889999999999999965432 257888899998754
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=92.31 E-value=0.35 Score=52.41 Aligned_cols=38 Identities=32% Similarity=0.363 Sum_probs=29.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..++|+||+|+|.|.+||..-+. +.+|+...|+|++..
T Consensus 495 ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 495 FSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp SEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 36789999999999999975442 257889999998754
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.21 E-value=0.45 Score=42.69 Aligned_cols=76 Identities=14% Similarity=0.300 Sum_probs=44.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-. +.+++.|+|.......|.. ...=.|+|...+...+.... .. .
T Consensus 104 ~~p~~~~~~~~-~~~~v~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~-~~------------------~ 156 (197)
T 3lpw_A 104 LPPGKITLMDV-TRNSVSLSWEKPEHDGGSR-------ILGYIVEMQTKGSDKWATCA-TV------------------K 156 (197)
T ss_dssp CCCSCEEEEEE-CSSCEEEEECCCSCCTTSC-------CCEEEEEEEETTCSCCEEEE-EE------------------S
T ss_pred CCCcccEEEec-cCCeEEEEecCCCcCCCCc-------ccEEEEEEEeCCCCceEEee-cc------------------c
Confidence 36777765533 3789999998743221100 12345667655443322111 00 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
...+.|++|+|+|.|.|+|...+
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A~n 179 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSAQN 179 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEEE
T ss_pred ccEEEeCCcCCCCEEEEEEEEEe
Confidence 13467899999999999997654
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=92.14 E-value=0.65 Score=46.69 Aligned_cols=90 Identities=10% Similarity=0.061 Sum_probs=53.4
Q ss_pred CCCceeEEeecCCCC-eEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 74 FEPEQLSVSLSFNHD-SIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~-~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
..|..+.+.-.. .+ ++.|+|.-... | ....=.|+|....+....... . .. ..
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~--~--------~~~~Y~v~~~~~~~~~~~~~~-~--~~-------------~~ 56 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE-E--VV-------------HA 56 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSC--S--------SCCEEEEEEEETTCTTSCCEE-E--EE-------------ET
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCC--C--------CeeeEEEEEEECCCCCCccee-E--Ec-------------CC
Confidence 358888776544 55 99999986431 1 112346777665432211111 0 00 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLP 190 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p 190 (552)
....+.|++|+|+|.|.++|......+.|.....++.+
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~ 94 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 94 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECC
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcC
Confidence 12467789999999999999765544666666666544
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.07 E-value=0.66 Score=41.67 Aligned_cols=88 Identities=16% Similarity=0.118 Sum_probs=51.6
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-- ..+++.|+|.-.... ...=.|+|....+. .. .... + +.
T Consensus 8 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~-~~-----~~~~----~---------~~ 56 (186)
T 1qr4_A 8 DNPKDLEVSDP-TETTLSLRWRRPVAK-----------FDRYRLTYVSPSGK-KN-----EMEI----P---------VD 56 (186)
T ss_dssp CCCEEEEEESC-CSSEEEEEEECCSSC-----------CSEEEEEEECTTCC-EE-----EEEE----C---------TT
T ss_pred cCCCceEEEec-CCCEEEEEEeCCCCC-----------ccEEEEEEEeCCCC-ee-----EEEC----C---------CC
Confidence 35788766533 478999999864321 12345677643221 11 1110 0 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPAS 192 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~~ 192 (552)
...+.|++|+|+|.|.++|........|. ...++|.|.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 57 STSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp CSEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCC
T ss_pred CCEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCC
Confidence 23567899999999999997655344444 5667776543
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=92.00 E-value=0.45 Score=43.86 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=18.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..++|+||+|+|.|.++|..-.
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4688999999999999997644
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=91.90 E-value=0.76 Score=38.59 Aligned_cols=72 Identities=24% Similarity=0.400 Sum_probs=43.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-- +.+++.|+|...... ...=.|+|....+..... . ... + +..
T Consensus 6 ~P~~L~v~~~-t~~Sv~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~---~-~~v----~---------~~~ 56 (114)
T 3qwq_B 6 VPRDLEVVAA-TPTSLLISWDSGRGS-----------YQYYRITYGETGGNSPVQ---E-FTV----P---------GPV 56 (114)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCSCC-----------CSEEEEEEEESSCSSCCE---E-EEE----E---------TTC
T ss_pred CCCceEEEec-CCCEEEEEEcCCcCc-----------ccEEEEEEEECCCCCccE---E-EEe----C---------CCc
Confidence 5777766543 468999999864311 123457777654321110 0 000 0 112
Q ss_pred EEEEeCCCCCCCEEEEEEecC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDP 175 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~ 175 (552)
..++|+||+|+|.|.++|..-
T Consensus 57 ts~~l~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 57 HTATISGLKPGVDYTITVYAV 77 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEE
Confidence 368899999999999998643
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.48 E-value=0.98 Score=38.29 Aligned_cols=88 Identities=17% Similarity=0.113 Sum_probs=48.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++++.-.. +++.|+|.-.....|. ...=.|+|.... .... ... . ....
T Consensus 30 ~P~~l~~~~~~--~sv~l~W~~P~~~~g~--------i~~Y~v~y~~~~-~~~~-----~~~----~---------~~~~ 80 (126)
T 1x5i_A 30 VPSSLHVRPLV--TSIVVSWTPPENQNIV--------VRGYAIGYGIGS-PHAQ-----TIK----V---------DYKQ 80 (126)
T ss_dssp SCSEEEEEEET--TEEEEEEECCSCTTBC--------CCEEEEEECSSC-GGGE-----EEE----C---------CTTC
T ss_pred CCCeeEEEecC--CEEEEEEcCCCCCCCC--------EeEEEEEEEcCC-CCce-----EEE----e---------CCCe
Confidence 57777766553 8999999875422111 122346666321 1110 000 0 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~ 191 (552)
...+|++|+|+|.|.++|..-+..+.+. ...++|.+.
T Consensus 81 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~ 119 (126)
T 1x5i_A 81 RYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 119 (126)
T ss_dssp CEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred eEEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccC
Confidence 4678899999999999997654322222 234566544
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.42 E-value=1.5 Score=42.04 Aligned_cols=101 Identities=13% Similarity=0.134 Sum_probs=57.2
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|.++.+.-.. .+++.|+|.-.. |. ...=.|+|......... ..... ...
T Consensus 16 ~~P~~l~~~~~~-~~sv~l~W~~~~---~~--------~~~Y~v~~~~~~~~~~~----~~~~~-------------~~~ 66 (283)
T 1tdq_A 16 DGPTQILVRDVS-DTVAFVEWTPPR---AK--------VDFILLKYGLVGGEGGK----TTFRL-------------QPP 66 (283)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCS---SC--------CSEEEEEEEESSSSCCC----EEEEE-------------CTT
T ss_pred CCCcEEEEEecC-CCeEEEEEECCC---Cc--------eeEEEEEEEEecCCCCc----EEEEe-------------CCC
Confidence 368887765433 689999998754 11 12346777543321111 01110 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCC--ceEEEEcCCCCCCCCCceEEEEEeC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPASGPQSYPKRIAIVGD 206 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S--~~~~F~T~p~~~~~~~~~rfavigD 206 (552)
...+.|++|+|+|.|.++|......+.| ....|+|.|.+.. .+++..+++
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~---~l~~~~~~~ 118 (283)
T 1tdq_A 67 LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPK---NLRVGSRTA 118 (283)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCE---EEEEEEECS
T ss_pred CCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCC---ceEEEecCC
Confidence 2467889999999999999765433333 3556777665421 355555444
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=91.42 E-value=0.54 Score=37.90 Aligned_cols=72 Identities=21% Similarity=0.284 Sum_probs=42.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCC-ceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+++.-- +.+++.|+|...... ...=.|+|....+.. .... .. ++-
T Consensus 7 ~P~~l~v~~~-t~~Si~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~v-------------~~~ 56 (97)
T 3qht_C 7 VPTKLEVVAA-TPTSLLISWDASSSS-----------VSYYRITYGETGGNSPVQEF-----TV-------------PGS 56 (97)
T ss_dssp SSSSCEEEEE-ETTEEEEECCCCCSS-----------CCEEEEEEEESSSCSCCEEE-----EE-------------ETT
T ss_pred CCCceEEEec-CCCEEEEEEeCCCCC-----------CCEEEEEEEECCCCCccEEE-----Ee-------------CCC
Confidence 5777766543 368999999753211 123356776654321 1110 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
...++|+||+|+|.|.++|..-.
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 24688999999999999987543
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=91.31 E-value=1 Score=43.52 Aligned_cols=100 Identities=17% Similarity=0.075 Sum_probs=55.8
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.- ...+++.|+|...... ...=.|+|.......... ... ...
T Consensus 114 ~~P~~l~~~~-~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~-----~~~-------------~~~ 163 (290)
T 3r8q_A 114 SPPRRARVTD-ATETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQ-----RTI-------------KPD 163 (290)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSCC-----------CCEEEEEEEESSSCCCEE-----EEE-------------CTT
T ss_pred CCCceeEEEE-cCCCeEEEEEeCCCCc-----------ccEEEEEEEECCCCcceE-----Eec-------------CCC
Confidence 3577776653 3478999999874311 123456666544322111 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCCCCCCCCceEEEEEeC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPASGPQSYPKRIAIVGD 206 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~~~~~~~~~rfavigD 206 (552)
...+.|+||+|+|.|.++|..-...+.|. ...++|.|.+.. .+++..+++
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~---~l~~~~~~~ 215 (290)
T 3r8q_A 164 VRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPS---NLRFLATTP 215 (290)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCE---EEEEEEEET
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCC---ccEEEeeCC
Confidence 23578899999999999997554333443 445666654321 355554444
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=91.04 E-value=0.33 Score=46.99 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=28.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC--CCCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP--AMSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~--~~S~~~~F~T~p 190 (552)
...+|+||+|+|.|.++|..-+.. .+|....|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 367899999999999999654422 478889999964
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.03 E-value=0.7 Score=38.40 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=25.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceE-EEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVY-YFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~-~F~T~p~ 191 (552)
..++|++|+|+|.|.|||...+.. .+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 457889999999999999765432 234433 4666543
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.80 E-value=1 Score=37.84 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=24.3
Q ss_pred eCCCCCCCEEEEEEecCCCC---CCCce-EEEEcCCCC
Q 008826 159 LTGLEPNNKYYYQCGDPSIP---AMSDV-YYFRTLPAS 192 (552)
Q Consensus 159 l~gL~P~T~Y~Y~v~~~~~~---~~S~~-~~F~T~p~~ 192 (552)
+.+|+|+|.|.|||...+.. .+|.. ..|+|.+..
T Consensus 78 i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 78 QLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 56999999999999754432 45555 478887643
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.70 E-value=1.2 Score=40.64 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=51.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCC-CCceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+.+.- ..+++.|+|.-.... +.. ...=.|+|..... ..+....... + + .
T Consensus 8 ~P~~~~~~~--~~~sv~l~W~~p~~~-~~~-------i~~Y~v~~~~~~~~~~w~~~~~~~-------~--~-------~ 61 (205)
T 1cfb_A 8 APKLTGITC--QADKAEIHWEQQGDN-RSP-------ILHYTIQFNTSFTPASWDAAYEKV-------P--N-------T 61 (205)
T ss_dssp CCEEEEEEE--CSSEEEEEEECCCCT-TSC-------CCEEEEEEEESSSTTCCEEEEEEE-------E--T-------T
T ss_pred CCCCcEEEe--cCCEEEEEEECcccC-CCc-------eEEEEEEEecCCCCCCceeeeecc-------C--C-------C
Confidence 688888776 689999999865311 110 1234577765432 2222111110 0 1 0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCC-ceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMS-DVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S-~~~~F~T~p~ 191 (552)
.....+ +|+|+|.|.|||..-+. ..+| ....++|.+.
T Consensus 62 ~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 62 DSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp CSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred ceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 113345 99999999999865432 2455 4567888764
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.65 E-value=0.71 Score=38.58 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=47.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++++.-.. +++.|+|.-.....|. ...=.|+|..... .... ... ..-.
T Consensus 20 ~P~~l~~~~~~--~sv~l~W~~P~~~ng~--------i~gY~i~y~~~~~-~~~~-----~~~-------------~~~~ 70 (116)
T 2edb_A 20 QPSSLHVRPQT--NCIIMSWTPPLNPNIV--------VRGYIIGYGVGSP-YAET-----VRV-------------DSKQ 70 (116)
T ss_dssp CCSCEEEEECS--SCEEEEECCCSCTTBC--------CCEEEEEEEESST-TSEE-----EEE-------------ETTC
T ss_pred CCCCeEEEECC--CEEEEEEcCCCCCCCc--------eeEEEEEEEeCCC-CeEE-----EEe-------------CCCe
Confidence 57777765543 8999999764322110 1223566664221 1110 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p 190 (552)
...+|++|+|+|.|.+||..-+..+.+. ...++|.+
T Consensus 71 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~~ 108 (116)
T 2edb_A 71 RYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRS 108 (116)
T ss_dssp CEEEECSCCSSSBEEEEEEEEETTEECSCEEECCBCCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCccCCCCcceeeccc
Confidence 4678899999999999997654333332 33455554
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.51 E-value=0.67 Score=37.92 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=43.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+++.- -+.+++.|+|.......|. ...=.|+|.......... . ... ++-.
T Consensus 10 ~P~~l~v~~-~t~~Sv~lsW~~p~~~~g~--------i~~Y~v~y~~~~~~~~~~---~-~~v-------------~~~~ 63 (103)
T 3t04_D 10 VPTKLEVVD-ATPTSLKISWDAYYSSWQN--------VKYYRITYGETGGDSPVQ---E-FTV-------------PGYY 63 (103)
T ss_dssp CCCSCEEEE-EETTEEEEECTTTTTTSCC--------CCEEEEEEEETTCSSCCE---E-EEE-------------ETTC
T ss_pred CCceeEEEe-cCCCEEEEEccCCCCCCCc--------cceEEEEEEECCCCCccE---E-EEc-------------CCCc
Confidence 577777653 2478999999764421110 122357777653211110 0 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..++|+||+|+|.|.++|....
T Consensus 64 ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 64 STATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp CEEEECSCCTTCCEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4788999999999999997653
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=90.48 E-value=0.87 Score=45.72 Aligned_cols=38 Identities=26% Similarity=0.271 Sum_probs=27.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC--ceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S--~~~~F~T~p~~ 192 (552)
..+.|++|+|+|.|.+||...+..+.| ....|+|.+.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEEEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceeeEecCCCCC
Confidence 457889999999999999765433333 24589998764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=90.37 E-value=1.1 Score=41.20 Aligned_cols=79 Identities=22% Similarity=0.239 Sum_probs=45.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-. +.+++.|+|.-... | ....=.|+|....+..... .... ++..
T Consensus 116 ~P~~l~~~~~-~~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~~ 167 (203)
T 2gee_A 116 PPTDLRFTNI-GPDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVA----ELSI-------------SPSD 167 (203)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCSS--C--------CCSEEEEEEEETTCGGGCE----EEEE-------------CTTC
T ss_pred CCCceEEEEc-CCCEEEEEEcCCCC--C--------CccEEEEEEEECCCCCccE----EEEc-------------CCCc
Confidence 5777765433 36899999987531 1 1123456776643321110 0000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
..+.|+||+|+|.|.++|..-...+.|
T Consensus 168 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s 194 (203)
T 2gee_A 168 NAVVLTNLLPGTEYVVSVSSVYEQHES 194 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CEEEECCCCCCCEEEEEEEEecCCCcC
Confidence 467889999999999999765433333
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.12 E-value=0.49 Score=39.79 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=26.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~ 191 (552)
.+.+. |+|+|.|.+||.+-+. ..+|+...|+|...
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 55666 9999999999864322 35777888998754
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.66 E-value=0.17 Score=41.63 Aligned_cols=73 Identities=19% Similarity=0.299 Sum_probs=42.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++++.-- +.+++.|+|......+ ..=.|+|......... ... .. ++..
T Consensus 10 ~P~~l~v~~~-t~~si~lsW~~p~g~i-----------~~Y~v~y~~~~~~~~~----~~~----~v---------~~~~ 60 (105)
T 2ekj_A 10 PPSNLALASE-TPDSLQVSWTPPLGRV-----------LHYWLTYAPASGLGPE----KSV----SV---------PGAR 60 (105)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCSSCC-----------SBBCBBCCCTTSCSCC----CCB----CC---------BTTS
T ss_pred CCCceEEEeC-CCCEEEEEEeCCCCcc-----------eEEEEEEEECCCCCcc----EEE----Ee---------CCCc
Confidence 5788776533 3789999998753211 1234556554321100 000 00 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..++|+||+|+|.|.++|..-.
T Consensus 61 ~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 61 SHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp SEEEECSCCSSCCCBCBBCBBC
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678899999999999997654
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.11 E-value=0.77 Score=38.11 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=19.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI 177 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~ 177 (552)
..+.|++|+|+|.|.+||...+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~ 96 (119)
T 1wfn_A 74 LEYRVTGLTALTTYTIEVAAMTS 96 (119)
T ss_dssp CEEEEESCCTTCEEEEEEEEECS
T ss_pred eEEEEcCCCCCCEEEEEEEEEcC
Confidence 46788999999999999976553
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.97 E-value=1 Score=41.32 Aligned_cols=39 Identities=26% Similarity=0.390 Sum_probs=28.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~ 193 (552)
....|.+|+|++.|.|||...+. ..+|....|+|+|..+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 46778999999999999975442 2567788899988654
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=88.54 E-value=1.1 Score=41.08 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..+.|++|+|+|.|.+||...+
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n 186 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVAEN 186 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEEEe
Confidence 3568899999999999997554
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=88.30 E-value=0.75 Score=49.17 Aligned_cols=96 Identities=17% Similarity=0.167 Sum_probs=57.2
Q ss_pred CCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 73 GFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 73 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
...|..+.+... .++++.|+|.......|. ...=.|+|...+...+.. . .... +. ..
T Consensus 387 P~PP~nl~v~~~-s~~sl~LsW~pP~~~~g~--------~l~YeV~Yr~~~~~~w~~---~-~~~~------~~----~~ 443 (488)
T 2q7n_A 387 PHDPTSLKVKDI-NSTVVTFSWYLPGNFTKI--------NLLCQIEICKANSKKEVR---N-ATIR------GA----ED 443 (488)
T ss_dssp CCCCEEEEEEEC-STTCEEEEEEEEEECSSS--------EEEEEEEEBCTTSCCEEE---E-EEEE------CC----EE
T ss_pred CCCCeEEEEEec-CCCEEEEEEeCCCCCCCc--------ceEEEEEEEECCCCCceE---E-EEEe------cC----CC
Confidence 346887776543 478999999876432111 023457777665432211 0 0000 00 11
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC--C---CCCCceEEEEcCCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPS--I---PAMSDVYYFRTLPA 191 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~--~---~~~S~~~~F~T~p~ 191 (552)
..+.+.|.+|+|+|+|..||.... . +.||+...|+|++.
T Consensus 444 ~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 444 STYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred cEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 346789999999999999885332 1 26778888998764
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=88.02 E-value=2.4 Score=38.43 Aligned_cols=90 Identities=7% Similarity=-0.006 Sum_probs=50.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCC--cCcCCCCCCCCCCCccEEEEecCCCCC-ceEEEEEEEEeeeecccCCccccc
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEF--QIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYT 150 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~ 150 (552)
..|..+.+.. .+++++.|+|..... .-|. ...=.|+|...+... +.... . .
T Consensus 106 ~~P~~~~~~~-~~~~sv~l~W~~p~~~~~ng~--------i~~Y~v~~~~~~~~~~~~~~~----~-------~------ 159 (205)
T 1cfb_A 106 KNPDNVVGQG-TEPNNLVISWTPMPEIEHNAP--------NFHYYVSWKRDIPAAAWENNN----I-------F------ 159 (205)
T ss_dssp CCCSCCEEEC-SSTTCEEEECCCCCGGGTCSS--------SCEEEEEEEESSTTCCCEEEE----E-------C------
T ss_pred CCCeeeEeec-CCCCeEEEEEECCCccccCCC--------ceEEEEEEEECCCCCCcEEEE----e-------c------
Confidence 3566766553 346899999986441 1111 123356676654432 11110 0 0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCC---C-CCceEEEEcC
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIP---A-MSDVYYFRTL 189 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~---~-~S~~~~F~T~ 189 (552)
......+.|++|+|+|.|.+||..-+.. . .|+...++|.
T Consensus 160 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 160 DWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 0012467789999999999999754322 2 3455666664
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=87.58 E-value=1.6 Score=43.26 Aligned_cols=92 Identities=13% Similarity=0.009 Sum_probs=54.1
Q ss_pred CCCCceeEEeecC-CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccccc
Q 008826 73 GFEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 73 ~~~P~qi~l~~~~-~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
...|..+.+.... +++++.|+|.......+. .+ ...=.|+|...+...+..+.- .
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~-----~~-~~~Y~V~yr~~~~~~W~~~~~---------~--------- 252 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSS-----FY-RLRFELRYRAERSKTFTTWMV---------K--------- 252 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCS-----SS-CEEEEEEEEETTCSCCEEEEC---------G---------
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCC-----cE-eEEEEEEEEeCCCCCCEEEcc---------c---------
Confidence 3568888777654 468999999875421000 00 023457777665433322110 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------CCCCceEEEEc
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSI------PAMSDVYYFRT 188 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~------~~~S~~~~F~T 188 (552)
.....+.|.+|+|+|.|.+||...+. +.||+...++|
T Consensus 253 ~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 253 DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 01135678999999999999965431 25666666655
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=87.36 E-value=0.8 Score=37.43 Aligned_cols=28 Identities=21% Similarity=0.215 Sum_probs=20.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD 182 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~ 182 (552)
..+.|+||+|||.|...|..-.....|.
T Consensus 59 ~s~~l~~L~PgT~Y~V~v~a~~~~~~S~ 86 (95)
T 2h41_A 59 TSVNIPDLLPGRKYIVNVYQISEDGEQS 86 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCccc
Confidence 4788999999999999987543223443
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=86.93 E-value=1.9 Score=43.04 Aligned_cols=74 Identities=19% Similarity=0.281 Sum_probs=42.9
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-. +.+++.|+|...... ...=.|+|....+..... .... ++-
T Consensus 277 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~ 327 (368)
T 1fnf_A 277 DVPRDLEVVAA-TPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQ----EFTV-------------PGS 327 (368)
T ss_dssp CSCEEEEEEEE-ETTEEEEEEECCSSC-----------CSEEEEEEEETTCCSCCE----EEEE-------------ETT
T ss_pred CCCCeeEEEec-CCCEEEEEeeCCCCc-----------cceEEEEEEECCCCCccE----EEEc-------------CCC
Confidence 35666655432 368999999764321 123456776554321110 0000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
.....|+||+||+.|.|+|..-.
T Consensus 328 ~~~~~~~~L~p~t~Y~~~V~A~~ 350 (368)
T 1fnf_A 328 KSTATISGLKPGVDYTITVYAVT 350 (368)
T ss_dssp CCEEEECSCCTTCCEEEEEEEEC
T ss_pred eeEEEecCCCCCCEEEEEEEEeC
Confidence 24678899999999999997554
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.86 E-value=2 Score=39.02 Aligned_cols=88 Identities=18% Similarity=0.228 Sum_probs=49.1
Q ss_pred CCceeEEee-cCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCC-CceEEEEEEEEeeeecccCCccccccC
Q 008826 75 EPEQLSVSL-SFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 75 ~P~qi~l~~-~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
.|.++.++- +..++++.|+|.... |.. ...=.|+|...... .+... .. + +
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~---~~~-------i~~Y~v~~~~~~~~~~~~~~-----~~----~---------~ 53 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSH-------ISKYILRWRPKNSVGRWKEA-----TI----P---------G 53 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCS---STT-------CCEEEEEEEETTCSSCCEEE-----EE----C---------T
T ss_pred CceeEEEEecCCCCCEEEEEEeCCC---CCC-------ceEEEEEEEECCCCCceEEE-----ec----C---------C
Confidence 366766543 223789999998742 111 12345777754331 11111 01 0 1
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLP 190 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p 190 (552)
....+.|+||+|+|.|.++|..-...+.+. ...|+|..
T Consensus 54 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 54 HLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp TCCEEEECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CccEEEecCCCCCCEEEEEEEEEecccccCceeEEEecCC
Confidence 123678999999999999998654323322 44566643
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=86.74 E-value=2.4 Score=42.45 Aligned_cols=86 Identities=16% Similarity=0.108 Sum_probs=49.2
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCC-CCceEEEEEEEEeeeecccCCccccccC
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
..|..+.+.- -+.+++.|+|...... ...=.|+|..... ..... .... +
T Consensus 279 ~~P~~l~~~~-~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~-----~~~~-------------~ 328 (375)
T 3t1w_A 279 DSPTGIDFSD-ITANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRE-----DRVP-------------H 328 (375)
T ss_dssp CCCEEEEEES-CCSSCEEEEEECCSSC-----------CSEEEEEEEETTCCSSCEE-----EEEE-------------T
T ss_pred CCCCccEeee-ccCCEEEEEECCCCcc-----------eeeEEEEEEECCCCCccee-----EEcC-------------C
Confidence 3577666532 2468899999874311 1234567766543 11111 1110 1
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~ 189 (552)
-.....|+||+|||.|.++|..-...+.|+ ...++|.
T Consensus 329 ~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 329 SRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred CccEEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEe
Confidence 123568899999999999997655334443 4455554
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.07 E-value=0.85 Score=48.68 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=58.2
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccccc
Q 008826 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
....|..+.+... .++++.|+|.......+. .-.-.|+|...+..... .. ++ ..+. .
T Consensus 381 kP~PP~nl~v~~~-~stsl~LsW~~P~~~~~~--------~L~YeVrYr~~~~~~~~----~~--vs----v~~~----~ 437 (483)
T 3e0g_A 381 YPHTPTSFKVKDI-NSTAVKLSWHLPGNFAKI--------NFLCEIEIKKSNSVQEQ----RN--VT----IQGV----E 437 (483)
T ss_dssp CCCCCEEEEECCS-SSSSCCEEEECCSCCTTS--------BCCCEEEEECSSSCCCE----EE--CC----CBCC----S
T ss_pred CCCCCeeeEEEEe-cCCeEEEEECCCCCCCCc--------eEEEEEEEEECCCCCce----EE--EE----Eecc----C
Confidence 3346887777532 468899999875421111 12457888876543211 00 10 0110 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC-----CCCCceEEEEcCCC
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSI-----PAMSDVYYFRTLPA 191 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~-----~~~S~~~~F~T~p~ 191 (552)
...+.+.|.+|+|+|+|..||..... +.||+...|+|+..
T Consensus 438 ~~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 438 NSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp SSBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred CceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 12346778999999999999875531 25777888988653
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=85.48 E-value=2.1 Score=46.52 Aligned_cols=69 Identities=10% Similarity=0.158 Sum_probs=43.6
Q ss_pred CCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEEEEEeCCCCCCC
Q 008826 87 HDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNN 166 (552)
Q Consensus 87 ~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T 166 (552)
.+++.++|......=|..+ ..=.|++...++..|..+. +. . .. ..+++||.||+
T Consensus 23 ~~sv~L~W~~P~~DGgs~I-------~~Y~vE~~~~~~~~W~~v~-~~---~-------------~t--~~~V~~L~~g~ 76 (573)
T 3uto_A 23 DEAVILSWKPPALDGGSLV-------TNYTIEKREAMGGSWSPCA-KS---R-------------YT--YTTIEGLRAGK 76 (573)
T ss_dssp SSCEEEEEECCSCCSSSCC-------CEEEEEEEESSSCCCEEEE-EE---S-------------SS--EEEECCCCTTC
T ss_pred CCEEEEEECCCCcCCCCcc-------cEEEEEEEECCCCceEEec-cc---c-------------CC--EEEeCCCCCCC
Confidence 6899999987533212111 2346788877777776542 11 0 01 34679999999
Q ss_pred EEEEEEecCCCCCCC
Q 008826 167 KYYYQCGDPSIPAMS 181 (552)
Q Consensus 167 ~Y~Y~v~~~~~~~~S 181 (552)
.|.|||.+.+..++|
T Consensus 77 ~Y~FRV~A~N~~G~s 91 (573)
T 3uto_A 77 QYEFRIIAENKHGQS 91 (573)
T ss_dssp EEEEEEEEEETTEEC
T ss_pred cEeEEEEEEcCceEc
Confidence 999999866543444
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=85.22 E-value=1.3 Score=41.59 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=27.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCc-eEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSD-VYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~-~~~F~T~p~~ 192 (552)
..+.|+||+|+|.|.++|..-+.. .+|. ...|+|.+..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred eEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 467889999999999999654422 3444 4678886643
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.17 E-value=2 Score=39.77 Aligned_cols=79 Identities=18% Similarity=0.159 Sum_probs=44.1
Q ss_pred CCCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCC-CCceEEEEEEEEeeeecccCCcccc
Q 008826 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNY 149 (552)
Q Consensus 71 ~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~ 149 (552)
+....|..+.+.....++++.|+|...... +....-.|+|...+. ..+..+.- +
T Consensus 108 vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~---------~~~l~yev~y~~~~~~~~w~~~~~------------~---- 162 (206)
T 3v6o_A 108 VKPLPPSSVKAEITINIGLLKISWEKPVFP---------ENNLQFQIRYGLSGKEVQWKMYEV------------Y---- 162 (206)
T ss_dssp BCCCCCCSCEEEEETTTTEEEEEC-----------------CEEEEEEEEESSSSCCCEEEEE------------C----
T ss_pred EcCCCCCceEeEEecCCCeEEEEECCCCCC---------CCcEEEEEEEEECCCCCceEEEec------------c----
Confidence 344568888887665578999999874321 001234577776542 22221110 0
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecC
Q 008826 150 TSGIIHHVRLTGLEPNNKYYYQCGDP 175 (552)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Y~v~~~ 175 (552)
......+.|.+|+|||.|..||...
T Consensus 163 -~~~~~~~~l~~L~p~t~Y~vqVRa~ 187 (206)
T 3v6o_A 163 -DAKSKSVSLPVPDLCAVYAVQVRCK 187 (206)
T ss_dssp -C---CEEEECCSCTTSCEEEEEEEE
T ss_pred -cCcceeEEeecCCCCCEEEEEEEEe
Confidence 0012367899999999999998643
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=85.15 E-value=2.8 Score=39.66 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=22.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTL 189 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~ 189 (552)
..+++||+|+|.|-|||..-+.. ...+...+||.
T Consensus 201 syt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 201 SYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 35679999999999999643321 12245566664
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=84.86 E-value=1.2 Score=42.40 Aligned_cols=95 Identities=13% Similarity=0.059 Sum_probs=52.4
Q ss_pred CCCCCceeEEeecCC-C----CeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCc
Q 008826 72 TGFEPEQLSVSLSFN-H----DSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGL 146 (552)
Q Consensus 72 ~~~~P~qi~l~~~~~-~----~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~ 146 (552)
....|..+.+++... . .++.|+|....... .+-+-..-.=.|+|...++..+....
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~----~~~g~~~l~Yevry~~~~~~~w~~~~--------------- 190 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNAD----IQKGWMVLEYELQYKEVNETKWKMMD--------------- 190 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSC----TTTTSCCEEEEEEEEETTCSSCEECC---------------
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCcc----ccCCceeeEEEEEEEECCCCceEEEe---------------
Confidence 345688886555442 2 35999998753210 00000012345677665432221100
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEecCC-----CCCCCceEEEEcC
Q 008826 147 QNYTSGIIHHVRLTGLEPNNKYYYQCGDPS-----IPAMSDVYYFRTL 189 (552)
Q Consensus 147 ~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~-----~~~~S~~~~F~T~ 189 (552)
......+.|.+|+|||+|..||.... -+.||+...|+|+
T Consensus 191 ----~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ----PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ----CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ----ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 00124678899999999999986432 1256777778764
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=84.60 E-value=2.6 Score=38.38 Aligned_cols=23 Identities=17% Similarity=0.288 Sum_probs=19.3
Q ss_pred eEEEEEeCCCCCCCEEEEEEecC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDP 175 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~ 175 (552)
....+.|++|+|+|.|.|||..-
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~ 90 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILAV 90 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEEE
Confidence 34677899999999999998754
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=84.59 E-value=2.2 Score=44.65 Aligned_cols=73 Identities=22% Similarity=0.270 Sum_probs=44.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCC-ceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+++.-.. ++|+.|+|..... |. ...=.|+|....... .. ...+ .+-
T Consensus 372 ~~~~l~~~~~~-~~s~~l~W~~p~~--~~--------~~~y~v~y~~~~~~~~~~----~~~~--------------~~~ 422 (461)
T 3csg_A 372 VPTNLEVVAAT-PTSLLISWDASYS--SS--------VSYYRITYGETGGNSPVQ----EFTV--------------PGS 422 (461)
T ss_dssp SSCCCEEEEEC-SSCEEEECCCTTG--GG--------CSEEEEEEEETTCCSCCE----EEEE--------------ETT
T ss_pred CCcceEEeccC-CCeEEEEecCCCC--Cc--------ceEEEEEEEECCCCccce----EEEe--------------cCC
Confidence 47777765444 7899999976411 11 123467776654221 11 1100 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..+|+|+||+|||+|..+|..-.
T Consensus 423 ~~~~~i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 423 KSTATISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEC
T ss_pred CceEEecCCCCCCEEEEEEEEEe
Confidence 25799999999999999997654
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=84.19 E-value=3.4 Score=37.86 Aligned_cols=86 Identities=14% Similarity=0.253 Sum_probs=52.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.... ...+.|+|...... ..-.-.|+|....+..+..+.. . .
T Consensus 100 ~pP~~l~~~~~~-~~~l~l~W~~p~~~----------~~l~yev~y~~~~~~~w~~~~~-----------~--------~ 149 (199)
T 2b5i_C 100 WAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-----------D--------Y 149 (199)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEEE-----------C--------S
T ss_pred CCCcEEEEEECC-CCCEEEEECCCCCC----------CceEEEEEEeecCCcccEEEec-----------c--------C
Confidence 468888777654 36899999985311 0123468888765544432210 0 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC------CC---CCCceEEEEcC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS------IP---AMSDVYYFRTL 189 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~------~~---~~S~~~~F~T~ 189 (552)
.....|.+|+|++.|..||.... .+ .||+...|.|.
T Consensus 150 ~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 150 RHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp SCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 13567799999999999986443 11 45666667663
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.16 E-value=4.9 Score=37.61 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=56.2
Q ss_pred CCCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccc
Q 008826 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (552)
Q Consensus 71 ~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~ 150 (552)
+....|..+.+.. .+.+.|+|.......- ...+ -..-.-.|+|...+. .+..+..... .. .
T Consensus 99 Vkp~PP~nltv~~---~~~l~lsW~~P~~~p~--~~~~-~~~L~Yevryr~~~~-~W~~~~~~~~-~~-----------~ 159 (219)
T 3tgx_A 99 IKPAPPFDVTVTF---SGQYQISWRSDYEDPA--FYML-KGKLQYELQYRNRGD-PWAVSPRRKL-IS-----------V 159 (219)
T ss_dssp BCCCCCEEEEEEE---SSSEEEEEECGGGSGG--GGGG-TTSEEEEEEEEETTS-CTTSCCEEEE-EC-----------S
T ss_pred EEeCCCCceEEEe---CCCEEEEEeCCcCCcc--cccc-ccCEEEEEEEecCCC-Cceeccccee-Ee-----------c
Confidence 3345688777762 4689999998532100 0000 001234677777653 2211100000 00 0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCC---------CCCCceEEEEcCCCC
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSI---------PAMSDVYYFRTLPAS 192 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~---------~~~S~~~~F~T~p~~ 192 (552)
.+....+.+.+|+|||.|..||..... +.||....|+|.+..
T Consensus 160 ~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 160 DSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 123456778899999999999853221 256889999998753
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=84.03 E-value=11 Score=35.86 Aligned_cols=36 Identities=6% Similarity=-0.115 Sum_probs=23.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC--CCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPA--MSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~--~S~~~~F~T~p 190 (552)
....+++|+|+|.|.++|..-...+ .+.....+|..
T Consensus 157 ~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~ 194 (290)
T 3l5i_A 157 RTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQ 194 (290)
T ss_dssp EEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSC
T ss_pred ceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccc
Confidence 5667899999999999997543222 23334444543
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=83.05 E-value=4 Score=39.12 Aligned_cols=89 Identities=13% Similarity=0.237 Sum_probs=54.5
Q ss_pred CCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 73 GFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 73 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
...|..+.+.... ...+.|+|...... ..-.-.|+|...++..+......
T Consensus 137 P~PP~nl~v~~~~-~~~l~l~W~~P~~~----------~~L~Yevry~~~~~~~W~~~~~~------------------- 186 (247)
T 2erj_C 137 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSVD------------------- 186 (247)
T ss_dssp CCCCEEEEEEESS-SSCEEEEEECSSCC----------TTEEEEEEEECSSCSSCEEEEEC-------------------
T ss_pred eCCCCeEEEEECC-CCcEEEEECCCCCC----------CcEEEEEEEeeCCCCCCEEEecC-------------------
Confidence 3468888777654 46899999985321 01123588887665444332100
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC------C---CCCCceEEEEcCCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPS------I---PAMSDVYYFRTLPA 191 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~------~---~~~S~~~~F~T~p~ 191 (552)
......|.+|+|++.|..||.... . +.||+...|.|.+.
T Consensus 187 ~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 187 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp SSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred CceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 113567799999999999986432 1 25777788888644
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=81.55 E-value=4 Score=40.05 Aligned_cols=102 Identities=13% Similarity=0.094 Sum_probs=52.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+++..+ .+++.|+|.......+. ...=.|+|....+..+............ ....+ ....
T Consensus 201 ~pP~~l~~~~~--~~~l~lsW~~P~~~~~~--------~l~Yev~y~~~~~~~w~~~~~~~~~c~~-~~~~~----~~~~ 265 (314)
T 3bpo_C 201 DPPHIKNLSFH--NDDLYVQWENPQNFISR--------CLFYEVEVNNSQTETHNVFYVQEAKCEN-PEFER----NVEN 265 (314)
T ss_dssp CCCEEEEEEEE--TTEEEEEEECCTTCCGG--------GEEEEEEEEC--CCCEEEEEESCCCCCC-TTSSC----CCSS
T ss_pred CCCCEEEEEEc--CCcEEEEEeCCCccCCc--------eEEEEEEEEECCCCcceEEecccccccc-ccccc----ccCC
Confidence 46888877633 57999999875421110 0123577776544322111000000000 00000 0123
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC-------C---CCCCceEEEEcCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS-------I---PAMSDVYYFRTLP 190 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~-------~---~~~S~~~~F~T~p 190 (552)
...+.|.+|+|+|+|.+||.... . +.||+...|.+.+
T Consensus 266 ~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 266 TSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp EEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred ceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 46788999999999999986432 1 2566667775543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 552 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 1e-73 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 2e-21 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 8e-21 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 2e-17 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 1e-07 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 5e-07 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 1e-05 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 2e-04 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 5e-04 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 234 bits (598), Expect = 1e-73
Identities = 123/358 (34%), Positives = 170/358 (47%), Gaps = 72/358 (20%)
Query: 192 SGPQSYPKRIAIVGDLGLTYNTTCTINH--MSSNEPDLVLLVGDVTYANLYLTNGTGSDC 249
+G P ++GDLG ++++ T++H +S + VL VGD++YA+ Y +
Sbjct: 2 TGL-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNH------ 54
Query: 250 YSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE---AQAGNQTFVAYSS 306
RWD WGRF + V+ P + GNHEIE + F +S
Sbjct: 55 -------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSY 101
Query: 307 RFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWL 366
R+ P E S S S F+YS H I+L +Y +Y + QY WL+K+L V RS TPWL
Sbjct: 102 RYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161
Query: 367 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL--- 423
+ H P Y+SY+ H+ E E MR + EA Y VD+VF GHVHAYERS RV N
Sbjct: 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 221
Query: 424 --------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSG 475
D PV+ITIGD GN +
Sbjct: 222 NGLCTPVKDQSAPVYITIGDAGNYGVID-------------------------------- 249
Query: 476 PAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQ 533
QP+YSAFRE+SFGHG+ ++KN T A ++W+RNQD D ++ +
Sbjct: 250 ----SNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNR 303
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 87.7 bits (217), Expect = 2e-21
Identities = 32/135 (23%), Positives = 49/135 (36%), Gaps = 22/135 (16%)
Query: 57 AVDIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITGEFQIGDNIKPLDPKTVAS 115
VD+P + P+Q+ ++ + I+W T K A+
Sbjct: 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTP-----------YDKAGAN 54
Query: 116 FVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDP 175
V Y + + A G + Y NYTS IHH + LE + KYYY+ G
Sbjct: 55 KVFYWSENSKSQKRAMGTVVTYKY-------YNYTSAFIHHCTIKDLEYDTKYYYRLGFG 107
Query: 176 SIPAMSDVYYFRTLP 190
++F T P
Sbjct: 108 D---AKRQFWFVTPP 119
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 85.7 bits (212), Expect = 8e-21
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 23/133 (17%)
Query: 59 DIPDTDPLVRRRVTGFEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFV 117
D+P + R P+Q+ ++ ++ I+W+T + + +S V
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMD------------EPGSSAV 49
Query: 118 RYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSI 177
RY + + A G Y NY+SG IHH + L+ N KYYY+ G +
Sbjct: 50 RYWSEKNGRKRIAKGKMSTYRF-------FNYSSGFIHHTTIRKLKYNTKYYYEVGLRN- 101
Query: 178 PAMSDVYYFRTLP 190
+ + F T P
Sbjct: 102 --TTRRFSFITPP 112
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 81.4 bits (199), Expect = 2e-17
Identities = 56/306 (18%), Positives = 85/306 (27%), Gaps = 64/306 (20%)
Query: 200 RIAIVGDLGLTYNTTCT-----------INHMSSNEPDLVLLVGDVTYANLYLTNGTGSD 248
R VGD G N + + D +L +GD Y
Sbjct: 6 RFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGV-------- 57
Query: 249 CYSCSFSKTPIHETYQPRWDYWGR--FMQNLVSKVPIMVVEGNHEIEAQAGNQT-FVAYS 305
H+ R+ F + VP V+ GNH+ Q + S
Sbjct: 58 -----------HDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKIS 106
Query: 306 SRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH-----------------QY 348
R+ FPS F + + ML S Q
Sbjct: 107 KRWNFPSPYYRL--RFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQL 164
Query: 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 408
W++K LA LVA +P W + + C+ ++ LL ++ V GH
Sbjct: 165 AWIKKQLAAAKE--DYVLVAGHYPVWSIA---EHGPTHCLVKQLLPLLTTHKVTAYLCGH 219
Query: 409 VHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFC 468
H + D G + G G ++ P + +GGF
Sbjct: 220 DHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFA 272
Query: 469 ATNFTS 474
T
Sbjct: 273 YVEITP 278
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 50.9 bits (120), Expect = 1e-07
Identities = 23/218 (10%), Positives = 68/218 (31%), Gaps = 5/218 (2%)
Query: 198 PKRIAIVGDLGLTYNTTCTI-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 256
P+++ + + ++ + ++ +PD++++VG++ + ++
Sbjct: 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 61
Query: 257 TPIHETYQPRWDYWGRFMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
IHE + +F + + V VV G ++ + + + +
Sbjct: 62 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLH 121
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPW---LVATWHP 372
+ + F G ++ D +W + + + P + P
Sbjct: 122 EGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPP 181
Query: 373 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
+ + ++ S ++ GHV
Sbjct: 182 IGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 219
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 49.4 bits (116), Expect = 5e-07
Identities = 25/232 (10%), Positives = 56/232 (24%), Gaps = 32/232 (13%)
Query: 217 INHMSSNEPDLVLLVGDVTYAN--------------------------LYLTNGTGSDCY 250
+ V+ +GD+ + N +
Sbjct: 42 VLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFS 101
Query: 251 SCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF 310
S + ++ + D + + + + A + + +
Sbjct: 102 RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEK 161
Query: 311 PSEESGSLSSFYYSFNAGGIHFIMLG-----AYISYDKSGHQYKWLEKDLANVDRSVTPW 365
+ L+ ++ + + +G + S Q +WL+ L D
Sbjct: 162 HTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV 221
Query: 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 417
L+ H P + + A + L V GH H R
Sbjct: 222 LIF-SHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD 272
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 44.8 bits (104), Expect = 1e-05
Identities = 27/196 (13%), Positives = 51/196 (26%), Gaps = 35/196 (17%)
Query: 224 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPI 283
PD ++ GD+ E R +
Sbjct: 45 RPDAIVFTGDLAD----------------------KGEPAAYRKLRGLVEPFAAQLGAEL 82
Query: 284 MVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 343
+ V GNH+ + F +E+ S++ G+ I+L +
Sbjct: 83 VWVMGNHD-----------DRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHH 131
Query: 344 SGH--QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGV 401
G + + ++A HPP S + + +L V
Sbjct: 132 HGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDV 191
Query: 402 DIVFNGHVHAYERSNR 417
+ GH+H +
Sbjct: 192 RAILAGHLHYSTNATF 207
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 16/160 (10%), Positives = 44/160 (27%), Gaps = 11/160 (6%)
Query: 262 TYQPRWDYWGRFMQ-NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSS 320
R + + Q P+ ++ GNH+ +A + + ++
Sbjct: 52 VNCGRPEEYQVARQILGSLNYPLYLIPGNHDDKA-------LFLEYLQPLCPQLGSDANN 104
Query: 321 FYYSFNAGGIHFIMLGAYISYDKSGH-QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS 379
+ + + + + + G + + A + H P +
Sbjct: 105 MRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGN 164
Query: 380 SHYREAECM--RVEMEALLYSYGVDIVFNGHVHAYERSNR 417
+ C + + + +F GH H+ +
Sbjct: 165 AQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY 204
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 39.7 bits (91), Expect = 5e-04
Identities = 21/220 (9%), Positives = 44/220 (20%), Gaps = 33/220 (15%)
Query: 198 PKRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 256
+ I + G + D + L+G++
Sbjct: 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLM--------------------- 43
Query: 257 TPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF--PSEE 314
DY F + +P V G + + E
Sbjct: 44 ----PKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLREAANVELVHPEMRNVHE 99
Query: 315 SGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPW 374
+ + Y G G ++ + E L + + +H
Sbjct: 100 TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMP 159
Query: 375 YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 414
Y + E + + +V
Sbjct: 160 YHKGLNEQGSHEVAHLIKT-----HNPLLVLVAGKGQKHE 194
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 552 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.98 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.89 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.89 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.88 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.85 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.84 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.64 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.61 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.13 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.12 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.01 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.01 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.97 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.95 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.47 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.34 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.29 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.03 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.79 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.36 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.26 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.01 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.99 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.95 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.92 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 96.83 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 96.76 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.76 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 96.74 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.74 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 96.72 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.69 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.68 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.65 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.55 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.53 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.53 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.49 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.47 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.46 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.46 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.4 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.37 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.35 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.32 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.31 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.31 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.3 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.24 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.23 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.2 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.19 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.18 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.16 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.15 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.12 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.12 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.11 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.1 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.1 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.05 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.03 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.01 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.89 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.88 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.75 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.74 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.74 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.65 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.63 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 95.57 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 95.53 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 95.52 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 95.51 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 95.51 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.5 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.46 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 95.35 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 95.3 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.27 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 95.25 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 95.21 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 95.21 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.18 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.16 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.06 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.03 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 94.76 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.62 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 94.58 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 94.51 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 94.29 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.26 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 94.03 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 93.65 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 93.45 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 93.41 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 93.18 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 91.54 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 91.43 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 87.2 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 87.13 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 84.98 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 84.75 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 84.52 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 84.18 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 83.88 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 80.5 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=4.8e-57 Score=461.82 Aligned_cols=283 Identities=43% Similarity=0.804 Sum_probs=242.5
Q ss_pred CceEEEEEeCCCCCCChHHHHHHHH--hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 197 YPKRIAIVGDLGLTYNTTCTINHMS--SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 197 ~~~rfavigD~~~~~~~~~~l~~l~--~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
.|+||+++||+|.+.+...++.++. +.+|||||++||++|+++... ....+|+.|++.+
T Consensus 6 ~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~-------------------~~~~~wd~~~~~~ 66 (312)
T d2qfra2 6 VPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPN-------------------HDNVRWDTWGRFT 66 (312)
T ss_dssp CCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHH
T ss_pred CCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcc-------------------cchHHHHHHHHHH
Confidence 3899999999998766666776643 468999999999999865321 1246899999999
Q ss_pred HHhhhcCCeEEecCCchhcccc---cCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHH
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQA---GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 351 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~---~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL 351 (552)
+++.+.+|+|+++||||+.... ....|..|..+|.+|.++.....+.||+|++|++|||+||++..+..+.+|++||
T Consensus 67 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL 146 (312)
T d2qfra2 67 ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWL 146 (312)
T ss_dssp HHHHTTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHH
T ss_pred HHHhhcceEEEecccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHH
Confidence 9999999999999999985432 2456888999999999877777889999999999999999998888889999999
Q ss_pred HHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccccc--------
Q 008826 352 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-------- 423 (552)
Q Consensus 352 ~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~-------- 423 (552)
+++|+++++++++|+||++|+|+|++...+..+.+.+|+.|++||.+++||+||+||+|.|||++||++.++
T Consensus 147 ~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~ 226 (312)
T d2qfra2 147 KKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCT 226 (312)
T ss_dssp HHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCS
T ss_pred HHHHHHHhhcCCCEEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccc
Confidence 999999988899999999999999987666666778999999999999999999999999999999987652
Q ss_pred ---CCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCcCCCCCCCccceeeCCceEE
Q 008826 424 ---DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHG 500 (552)
Q Consensus 424 ---~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~sa~~~~~~G~~ 500 (552)
+++|++||++|+||+.++... ++ ..++|+||++|+.+|||+
T Consensus 227 ~~~~~~g~vyiv~G~gG~~~~~~~--------------------------~~----------~~~~~~~s~~~~~~~G~~ 270 (312)
T d2qfra2 227 PVKDQSAPVYITIGDAGNYGVIDS--------------------------NM----------IQPQPEYSAFREASFGHG 270 (312)
T ss_dssp CEECTTSCEEEEECCSCTTSCCCC--------------------------CB----------CSSCCTTEEEEECCCEEE
T ss_pred cccCCCcCEEEEECcCCCcccccc--------------------------cc----------cCCCCCeeEEEecCCCEE
Confidence 578999999999998665321 11 146789999999999999
Q ss_pred EEEEecCCcEEEEEEEecCCCceeeEEEEEEeCC
Q 008826 501 ILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQP 534 (552)
Q Consensus 501 ~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~~ 534 (552)
+|+|+|+|||.|+|+++.|+...+.|+|||+|+.
T Consensus 271 ~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~~ 304 (312)
T d2qfra2 271 MFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 304 (312)
T ss_dssp EEEECSSSEEEEEEEESSSCTTCCSEEEEEECTT
T ss_pred EEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeCC
Confidence 9999999999999999999833334999999994
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.98 E-value=1.1e-31 Score=268.41 Aligned_cols=260 Identities=20% Similarity=0.270 Sum_probs=178.1
Q ss_pred ceEEEEEeCCCCCCCh-----------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHH
Q 008826 198 PKRIAIVGDLGLTYNT-----------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 266 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-----------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~ 266 (552)
.+||+++||+|.+.+. ..+.+.+.+.+|||||++||++|.++.. ..++.+
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~-------------------~~~~~~ 64 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVH-------------------DAKDKR 64 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCS-------------------STTCTH
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCC-------------------cccHHH
Confidence 6899999999876432 1223444457999999999999975321 112345
Q ss_pred HHHHHHHH--HHhhhcCCeEEecCCchhcccccC-cchHHhhhhcCCCCCCCCCCCcceEEEEc------CeEEEEEecc
Q 008826 267 WDYWGRFM--QNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYSFNA------GGIHFIMLGA 337 (552)
Q Consensus 267 wd~~~~~l--~~l~~~iP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYsf~~------G~v~fI~Ldt 337 (552)
|..+.+.+ .....++|+++++||||+...... ..+..+..++.+|. .||++.+ +.++|+++|+
T Consensus 65 ~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ldt 136 (302)
T d1utea_ 65 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPS--------PYYRLRFKIPRSNVSVAIFMLDT 136 (302)
T ss_dssp HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECCS--------SSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHHHhhhhhhcCCceEEeecccccccccccccchhhccccccCCC--------cccceeecccCCCCcEEEEEccc
Confidence 65544322 223578999999999998643211 11222333343432 4677664 4799999998
Q ss_pred cccC-----------------CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcC
Q 008826 338 YISY-----------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG 400 (552)
Q Consensus 338 ~~~~-----------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~ 400 (552)
.... ..+.+|++||+++|++. +.+|+|+++|+|+++.... ......+..|++||.+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~ 211 (302)
T d1utea_ 137 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHK 211 (302)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTT
T ss_pred eeEeecccccccccccccccchhHHHHHHHHHHHHHhh---ccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcC
Confidence 4210 12578999999999984 5689999999999986532 234567889999999999
Q ss_pred CcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCccccccccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCC
Q 008826 401 VDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGK 480 (552)
Q Consensus 401 VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~ 480 (552)
|++||+||+|.|+|+. .++++.||++|+||........ .. .. |
T Consensus 212 v~~~~~GH~H~~~r~~-------~~~~~~~i~~g~g~~~~~~~~~---------------------~~--~~---~---- 254 (302)
T d1utea_ 212 VTAYLCGHDHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKH---------------------LR--KV---P---- 254 (302)
T ss_dssp CSEEEECSSSSEEEEE-------CTTCCEEEEECBSSCCCCCCTT---------------------GG--GS---C----
T ss_pred ceEEEeCCCcceEEEe-------cCCccEEEEeCCCCCCCCCccc---------------------cc--cC---C----
Confidence 9999999999999986 4678999999998874322110 00 00 0
Q ss_pred cCCCCCCCcc-ceeeCCceEEEEEEecCCcEEEEEEEecCCCceeeEEEEEEeC
Q 008826 481 FCWDRQPDYS-AFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQ 533 (552)
Q Consensus 481 ~~~~~~p~~s-a~~~~~~G~~~l~v~n~t~~~~~~~~~~d~~~~v~D~~~i~k~ 533 (552)
...+.+. ......+||++++| +++.++++|+. .+| +++|++.|-|.
T Consensus 255 ---~~~~~~~~~~~~~~~gf~~~~v-~~~~l~~~~~~-~~G--~~~~~~~~~~~ 301 (302)
T d1utea_ 255 ---NGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIE-ASG--KSLFKTKLPRR 301 (302)
T ss_dssp ---TTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEE-TTS--CEEEEEEECCC
T ss_pred ---CcccceeecccCCcceEEEEEE-ECCEEEEEEEe-CCC--CEEEEEEecCC
Confidence 0112221 12246789999999 77899999985 566 89999999653
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.89 E-value=2.9e-23 Score=178.31 Aligned_cols=110 Identities=29% Similarity=0.438 Sum_probs=94.1
Q ss_pred CCCCCCCcccccCCCCCCceeEEeecCCC-CeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEe
Q 008826 59 DIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVY 137 (552)
Q Consensus 59 ~~~~~~p~~~~~~~~~~P~qi~l~~~~~~-~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y 137 (552)
|+|.+++..+.+...++|+||||++++++ ++|.|+|+|.+.. ..+.|+||++++.+...+.|.+..|
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~------------~~~~V~yg~~~~~~~~~a~~~~~~~ 69 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP------------GSSAVRYWSEKNGRKRIAKGKMSTY 69 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSC------------CCCEEEEEESSSCCCEEEECEEECC
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCC------------CCcEEEEEECCCCCCcEEEEEEEEE
Confidence 78888887787888899999999999865 8999999996531 4689999999999999999887765
Q ss_pred eeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCC
Q 008826 138 DQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLP 190 (552)
Q Consensus 138 ~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p 190 (552)
+. .++.++++|+|+|+||+|||+|+||||++ +||++++|||+|
T Consensus 70 ~~-------~~~~~~~~h~v~Lt~L~P~T~Y~YrVG~~---~~S~~~~F~T~P 112 (112)
T d2qfra1 70 RF-------FNYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPP 112 (112)
T ss_dssp BC-------SSCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCC
T ss_pred Ee-------cccCCcEEEEEEECCCCCCCEEEEEECCC---CceeeEEEEcCC
Confidence 42 13557899999999999999999999975 599999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.89 E-value=6.3e-23 Score=178.09 Aligned_cols=113 Identities=27% Similarity=0.409 Sum_probs=96.4
Q ss_pred CCCCCCCCCcccccCCCCCCceeEEeecCCC-CeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEE
Q 008826 57 AVDIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135 (552)
Q Consensus 57 ~~~~~~~~p~~~~~~~~~~P~qi~l~~~~~~-~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~ 135 (552)
..|+|.+.+.+..+.....|+||||++++++ ++|+|+|+|..... ..+.|+||++++.+...+.|.+.
T Consensus 6 ~~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~-----------~~~~V~yG~~~~~~~~~a~g~s~ 74 (119)
T d1xzwa1 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKA-----------GANKVFYWSENSKSQKRAMGTVV 74 (119)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCT-----------TTTEEEEEETTCCCCEEEECEEE
T ss_pred ccccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCC-----------CCCEEEEcCCCCCCccEEEEEEE
Confidence 3478888888888888889999999999865 89999999964321 35699999999999999999887
Q ss_pred EeeeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcCC
Q 008826 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLP 190 (552)
Q Consensus 136 ~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~p 190 (552)
.|+.. +++++++|+|+|+||+|||+|+||||++ +||++|+|||+|
T Consensus 75 ~~~~~-------~~~~~~~H~v~LtgL~P~T~Y~YrVG~~---~~S~~~~F~T~P 119 (119)
T d1xzwa1 75 TYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPP 119 (119)
T ss_dssp CCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCC
T ss_pred Eeecc-------cccCCeEEEEEECCCCCCCEEEEEECCC---CccceEEEeCCC
Confidence 77532 4567899999999999999999999975 599999999987
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.88 E-value=1.1e-21 Score=192.39 Aligned_cols=193 Identities=15% Similarity=0.188 Sum_probs=129.0
Q ss_pred ceEEEEEeCCCCCCC-------------hHHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccc
Q 008826 198 PKRIAIVGDLGLTYN-------------TTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 262 (552)
Q Consensus 198 ~~rfavigD~~~~~~-------------~~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~ 262 (552)
.+||++++|+|+... ..++++++.+ .+|||||++||++. +|.
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~------~g~----------------- 60 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLAD------KGE----------------- 60 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBS------SCC-----------------
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC------CCC-----------------
Confidence 699999999997532 1334555554 47999999999994 243
Q ss_pred cHHHHHHHHHHHHHhh--hcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEeccccc
Q 008826 263 YQPRWDYWGRFMQNLV--SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS 340 (552)
Q Consensus 263 y~~~wd~~~~~l~~l~--~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~ 340 (552)
...++.+.+.++++. .++|+++++||||.. . .+...+.... ......+|++..++++|++||+...
T Consensus 61 -~~~~~~~~~~l~~~~~~~~~p~~~v~GNHD~~-----~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~ 128 (256)
T d2hy1a1 61 -PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----A---ELRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVP 128 (256)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----H---HHHHHTTCCC---CCCSCCCEEEEETTEEEEECCCBCT
T ss_pred -hhHHHHHHHHhhhhhhhcCCCEEEEcccccch-----h---hhhhhhcccc---ccccccceEEEecccceeeeeeeec
Confidence 234455556555542 368999999999953 1 2222221111 1234567889999999999998643
Q ss_pred C----CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008826 341 Y----DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (552)
Q Consensus 341 ~----~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 415 (552)
. ....+|++||++.|++.. ...+||++|+|++......... ....++.+..++++++|+++|+||+|...+.
T Consensus 129 ~~~~g~~~~~~~~wl~~~L~~~~---~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~ 205 (256)
T d2hy1a1 129 GHHHGEIRASQLGWLAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA 205 (256)
T ss_dssp TCSSBCCCHHHHHHHHHHHTSCC---TTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEE
T ss_pred CCcCCcccHHHHHHHHHHHHhhh---ccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhce
Confidence 2 346899999999999853 2346778888877643211000 0012467889999999999999999976554
Q ss_pred eeccccccCCCCcEEEEECCC
Q 008826 416 NRVFNYTLDPCGPVHITIGDG 436 (552)
Q Consensus 416 ~pv~n~~~~~~G~vyiv~G~g 436 (552)
. -+|+.++++|+.
T Consensus 206 ~--------~~gi~~~~~~s~ 218 (256)
T d2hy1a1 206 T--------FVGIPVSVASAT 218 (256)
T ss_dssp E--------ETTEEEEECCCC
T ss_pred E--------ECCEEEEEcCCc
Confidence 2 247888876553
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.85 E-value=1.2e-20 Score=186.58 Aligned_cols=208 Identities=19% Similarity=0.162 Sum_probs=130.9
Q ss_pred eEEEEEeCCCCCCC--------------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 199 KRIAIVGDLGLTYN--------------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 199 ~rfavigD~~~~~~--------------------~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
|||++++|+|.+.. ..+.++.+.+.+|||||++||+++....
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~------------------ 65 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNR------------------ 65 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHH------------------
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCc------------------
Confidence 89999999997520 1234566667899999999999953211
Q ss_pred cccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhh---hc--CCCCCCCCCCCcceEEEEcCeEEEE
Q 008826 259 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RF--AFPSEESGSLSSFYYSFNAGGIHFI 333 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~---~f--~~P~~~~~~~~~~yYsf~~G~v~fI 333 (552)
..+.....|+.+.+.++. ..+|++.++||||............... +. .......+......+.+..++++|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~--~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (320)
T d2nxfa1 66 RRDASDRALDTVMAELDA--CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFV 143 (320)
T ss_dssp HTTCHHHHHHHHHHHHHT--TCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEE
T ss_pred chhHHHHHHHHHHHHHHH--cCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEE
Confidence 001112234444444443 4799999999999864321000000000 00 0000011122344567788999999
Q ss_pred EecccccC----------------------------------------------CCcHHHHHHHHHHHhcccCCCCCEEE
Q 008826 334 MLGAYISY----------------------------------------------DKSGHQYKWLEKDLANVDRSVTPWLV 367 (552)
Q Consensus 334 ~Ldt~~~~----------------------------------------------~~~~~Q~~WL~~~L~~~~r~~~~w~I 367 (552)
.+++.... ..+.+|++||+++|+++.++. .++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~-~~vi 222 (320)
T d2nxfa1 144 LLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ-ERVL 222 (320)
T ss_dssp ECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred EecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhcC-CceE
Confidence 99863110 125889999999999865433 4689
Q ss_pred EEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeeccccccCCCCcEEEEECC
Q 008826 368 ATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435 (552)
Q Consensus 368 v~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~ 435 (552)
+++|+|++........ .....+++.++|.++ +|+++|+||+|..++.. ..+|+.||++|+
T Consensus 223 v~~H~p~~~~~~~~~~-~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-------~~~g~~~i~~~~ 283 (320)
T d2nxfa1 223 IFSHLPVHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEG 283 (320)
T ss_dssp EEESSCCCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCC
T ss_pred EEECCCCccCCCCCcc-chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee-------ccCCCEEEECCe
Confidence 9999999875433211 112356788999999 59999999999887653 357899998765
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.84 E-value=6.6e-20 Score=181.36 Aligned_cols=193 Identities=17% Similarity=0.271 Sum_probs=127.1
Q ss_pred eEEEEEeCCCCCCC---------h----HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc
Q 008826 199 KRIAIVGDLGLTYN---------T----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (552)
Q Consensus 199 ~rfavigD~~~~~~---------~----~~~l~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y 263 (552)
+||++++|+|.... . .++++++.+ .+||+||++||+++ +|.
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~------~~~------------------ 56 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN------CGR------------------ 56 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS------SCC------------------
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCc------CCc------------------
Confidence 58999999997421 2 345566654 47999999999995 232
Q ss_pred HHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC--
Q 008826 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-- 341 (552)
Q Consensus 264 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~-- 341 (552)
...++.+.+.++++ .+|+++++||||... .+..+...+. +.. ........|.++.++++||+||+....
T Consensus 57 ~~~y~~~~~~l~~l--~~p~~~i~GNHD~~~-----~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~i~ldt~~~~~~ 127 (271)
T d3d03a1 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKA-----LFLEYLQPLC-PQL-GSDANNMRCAVDDFATRLLFIDSSRAGTS 127 (271)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHH-----HHHHHHGGGS-GGG-CSCGGGCCEEECSSSSEEEECCCCCTTCS
T ss_pred chhHHHHHHHHhcc--CCCEEEEecCccchH-----HHHHHhhhhh-hcc-ccccCcceEEEecCCeEEEecccccCCCC
Confidence 23455666666665 789999999999742 1222211110 000 012345678888999999999986432
Q ss_pred --CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceeeee
Q 008826 342 --DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNR 417 (552)
Q Consensus 342 --~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~p 417 (552)
....+|++||+++|++.. +.+ +||++|+|++......... .....++|.++|+++ +|+++|+||+|......
T Consensus 128 ~~~l~~~ql~wL~~~L~~~~--~~~-~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~- 203 (271)
T d3d03a1 128 KGWLTDETISWLEAQLFEGG--DKP-ATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ- 203 (271)
T ss_dssp SBCCCHHHHHHHHHHHHHHT--TSC-EEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE-
T ss_pred cceecHHHHHHHHHHHhhhc--cce-eEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE-
Confidence 346899999999999863 334 5666677666544332211 111246788999998 69999999999766553
Q ss_pred ccccccCCCCcEEEEECC
Q 008826 418 VFNYTLDPCGPVHITIGD 435 (552)
Q Consensus 418 v~n~~~~~~G~vyiv~G~ 435 (552)
-+|+.++++.+
T Consensus 204 -------~~g~~~~~~ps 214 (271)
T d3d03a1 204 -------YRQALISTLPG 214 (271)
T ss_dssp -------ETTEEEEECCC
T ss_pred -------ECCEEEEEcCC
Confidence 24777765544
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.64 E-value=1.5e-15 Score=143.57 Aligned_cols=178 Identities=12% Similarity=0.061 Sum_probs=111.1
Q ss_pred ceEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~ 276 (552)
+-+|+++||+|..... ++.++.+.+.++|+|+++||++.. |.. ..++..+.+.+..
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~------~~~-----------------~~~~~~~~~~L~~ 61 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------Ccc-----------------chHHHHhhhhhcc
Confidence 4588999999986433 345555566799999999999942 221 1233444444444
Q ss_pred hhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccC----------CCcHH
Q 008826 277 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY----------DKSGH 346 (552)
Q Consensus 277 l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~----------~~~~~ 346 (552)
+ .+|+++++||||...... ....+......+.. ......+.+..+++.++.++..... .....
T Consensus 62 ~--~~pv~~i~GNHD~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T d1uf3a_ 62 A--HLPTAYVPGPQDAPIWEY--LREAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp G--CSCEEEECCTTSCSHHHH--HHHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred c--cceEEEEecCCCchhhhh--hhhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHH
Confidence 3 789999999999742210 00111111111100 0112235677888888888753221 12578
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 347 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 347 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
|.+|+++.++... ..+.|+++|.|++.....+... ..+.+++++++++++++||+|..+
T Consensus 135 ~~~~l~~~l~~~~---~~~~il~~H~p~~~~~~~~~~~-----~~~~~~~~~~~~~lvl~GH~H~~~ 193 (228)
T d1uf3a_ 135 VAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQGS-----HEVAHLIKTHNPLLVLVAGKGQKH 193 (228)
T ss_dssp HHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTSB-----HHHHHHHHHHCCSEEEECCSSCEE
T ss_pred HHHHHHHHHhhcc---CCceEEEEeeeccCcccccccc-----HHHHHHHHhcCCcEEEEcccccch
Confidence 9999999988753 2236888888887654322221 356778889999999999999753
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.61 E-value=5.2e-15 Score=142.10 Aligned_cols=207 Identities=13% Similarity=0.192 Sum_probs=109.0
Q ss_pred ceEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCcccccc-HHHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY-QPRWDYWGRFMQ 275 (552)
Q Consensus 198 ~~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y-~~~wd~~~~~l~ 275 (552)
|.||+++||+|..... .+.++.+.+.+||+||++||+++..... ......+.....+...+.... ...-..+..+++
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 80 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALE-KEYERAHLARREPNRKVIHENEHYIIETLDKFFR 80 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHH-HHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCC-HHHHHHHHhhhhhceeeeccccccchhhHHHHHH
Confidence 5799999999976543 4556666778999999999999531000 000000000000000000000 000011223344
Q ss_pred Hh-hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCC---------CcH
Q 008826 276 NL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD---------KSG 345 (552)
Q Consensus 276 ~l-~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~---------~~~ 345 (552)
.| ...+|+++++||||..... .....+......+. .......+.+..+++.|+.+++..... ...
T Consensus 81 ~L~~~~~pv~~i~GNHD~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T d2yvta1 81 EIGELGVKTFVVPGKNDAPLKI--FLRAAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPR 155 (257)
T ss_dssp HHHTTCSEEEEECCTTSCCHHH--HHHHHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEH
T ss_pred HHHhcCCcEEEEeCCCcchhhH--HHHHhccccccccc---cccccceeEEecCCeEEEEeccccCCccccchhhhhhhh
Confidence 44 2478999999999964211 11122221111111 001123344556778888876542211 123
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCch--hHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 346 HQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 346 ~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~--~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
.+.+|++..+++. +....|+++|+|++.+....... .......+..++++++++++++||+|...
T Consensus 156 ~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~ 222 (257)
T d2yvta1 156 WYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGH 222 (257)
T ss_dssp HHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEE
T ss_pred hHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCe
Confidence 4455555555553 33457889999887653321111 11123578889999999999999999643
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.13 E-value=2.6e-09 Score=99.04 Aligned_cols=142 Identities=17% Similarity=0.338 Sum_probs=84.2
Q ss_pred EEEEEeCCCCCCCh---HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 200 RIAIVGDLGLTYNT---TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 200 rfavigD~~~~~~~---~~~l~~-l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
-|+++||+|..... ...+.+ +...++|.|+++||++.. ...+.++
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~-------------------------------~~l~~l~ 53 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEMLK 53 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHHHH
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH-------------------------------HHHHHHH
Confidence 48999999974322 123334 445689999999999820 1233344
Q ss_pred HhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHH
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDL 355 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L 355 (552)
.+ ..+++.|.||||....... ..+.. .+| ..-.+.+++
T Consensus 54 ~l--~~~v~~V~GN~D~~~~~~~---~~~~~--~lp---------~~~~~~~~~-------------------------- 91 (193)
T d2a22a1 54 NI--TKNVYIVSGDLDSAIFNPD---PESNG--VFP---------EYVVVQIGE-------------------------- 91 (193)
T ss_dssp HH--CSCEEECCCTTCCSCCBCC---GGGTB--CCC---------SEEEEEETT--------------------------
T ss_pred hh--CCCEEEEcCCCCcchhhhh---HHHHh--hCC---------ccEEEEECC--------------------------
Confidence 43 3468899999997532111 11111 112 123333333
Q ss_pred hcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECC
Q 008826 356 ANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435 (552)
Q Consensus 356 ~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~ 435 (552)
+.|.+.|...+.... . .+.+..++.+.++|++++||+|...... -+|.++|..|+
T Consensus 92 ---------~~i~l~H~~~~~~~~----~----~~~l~~~~~~~~~dvvi~GHTH~~~~~~--------~~g~~~iNPGS 146 (193)
T d2a22a1 92 ---------FKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGT 146 (193)
T ss_dssp ---------EEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCC
T ss_pred ---------EEEEEEeccCCCCCC----C----HHHHHHHHhhcCCCEEEEcCccCceEEE--------ECCEEEEECCC
Confidence 244555543322111 1 2456677888899999999999864432 25888898898
Q ss_pred CCCc
Q 008826 436 GGNL 439 (552)
Q Consensus 436 gG~~ 439 (552)
.|..
T Consensus 147 vg~p 150 (193)
T d2a22a1 147 ATGA 150 (193)
T ss_dssp SSCC
T ss_pred CCcC
Confidence 7753
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.12 E-value=3.7e-09 Score=97.12 Aligned_cols=134 Identities=16% Similarity=0.296 Sum_probs=83.6
Q ss_pred eEEEEEeCCCCCCCh---HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT---TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (552)
Q Consensus 199 ~rfavigD~~~~~~~---~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l 274 (552)
+||+++||+|..... .+.+.++. +.++|.|+|+||++.. +..+.+
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~~-------------------------------e~l~~l 49 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK-------------------------------ESYDYL 49 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH-------------------------------HHHHHH
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccch-------------------------------hhHHHH
Confidence 589999999975432 23444443 4579999999999820 123334
Q ss_pred HHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHH
Q 008826 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 354 (552)
Q Consensus 275 ~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~ 354 (552)
+.+ ..|++.|.||||... .+|. .-.+++++
T Consensus 50 ~~~--~~~v~~V~GN~D~~~--------------~~p~---------~~~~~~~g------------------------- 79 (182)
T d1z2wa1 50 KTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTVGQ------------------------- 79 (182)
T ss_dssp HHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEETT-------------------------
T ss_pred Hhh--CCceEEEeCCcCccc--------------ccce---------EEEEEEcC-------------------------
Confidence 443 357899999999641 1221 11122111
Q ss_pred HhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEEC
Q 008826 355 LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434 (552)
Q Consensus 355 L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G 434 (552)
+.|.+.|.+.+.... . .+.+..++++.++|++|+||+|...... -+|+++|..|
T Consensus 80 ----------~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~divi~GHTH~p~~~~--------~~~~~~iNPG 133 (182)
T d1z2wa1 80 ----------FKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPG 133 (182)
T ss_dssp ----------EEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECC
T ss_pred ----------cEEEEEeCCCCCCCC----C----HHHHHHHHhccCCCEEEECCcCcceEEE--------ECCEEEEeCC
Confidence 245666665443221 1 2356667778899999999999754432 2588999899
Q ss_pred CCCCc
Q 008826 435 DGGNL 439 (552)
Q Consensus 435 ~gG~~ 439 (552)
+.|..
T Consensus 134 Sv~~p 138 (182)
T d1z2wa1 134 SATGA 138 (182)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87764
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.01 E-value=4.6e-10 Score=101.41 Aligned_cols=142 Identities=15% Similarity=0.045 Sum_probs=85.5
Q ss_pred eEEEEEeCCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHHHh
Q 008826 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (552)
Q Consensus 199 ~rfavigD~~~~~~-~~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~~l 277 (552)
+||+++||+|.... ..++++.+.+.++|.|+++||++.. .. .+.+.
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~---------------------------~~----~~~l~-- 47 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL---------------------------FV----IKEFE-- 47 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST---------------------------HH----HHHGG--
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH---------------------------HH----HHHHh--
Confidence 58999999997532 3456777778899999999999831 11 11122
Q ss_pred hhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHHHHHhc
Q 008826 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 357 (552)
Q Consensus 278 ~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~ 357 (552)
....|++.+.||||...... ........... .-+....+.++
T Consensus 48 ~~~~~~~~v~GN~D~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~----------------------------- 89 (165)
T d1s3la_ 48 NLNANIIATYGNNDGERCKL---KEWLKDINEEN------IIDDFISVEID----------------------------- 89 (165)
T ss_dssp GCSSEEEEECCTTCCCHHHH---HHHHHHHCTTC------EEESEEEEEET-----------------------------
T ss_pred hcCccEEEEcccccccchhh---hHhhhhhcccc------cCChhhceEEC-----------------------------
Confidence 23578999999999742210 00011110000 00111112111
Q ss_pred ccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCC
Q 008826 358 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (552)
Q Consensus 358 ~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG 437 (552)
...|++.|.+.+ ..+..++.+.++|++++||+|...... -+|.++|..|+-|
T Consensus 90 ------~~~i~l~Hg~~~--------------~~~~~~~~~~~~d~v~~GHtH~~~~~~--------~~~~~~iNPGSvg 141 (165)
T d1s3la_ 90 ------DLKFFITHGHHQ--------------SVLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGECC 141 (165)
T ss_dssp ------TEEEEEEESCCH--------------HHHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCSS
T ss_pred ------CcEEEEEECCcc--------------cHHHHHhhcCCCCEEEECCcCcceEEE--------ECCEEEEECCCCC
Confidence 125677776532 234556778899999999999743321 3588999999877
Q ss_pred Cc
Q 008826 438 NL 439 (552)
Q Consensus 438 ~~ 439 (552)
..
T Consensus 142 ~p 143 (165)
T d1s3la_ 142 GY 143 (165)
T ss_dssp CT
T ss_pred CC
Confidence 63
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.01 E-value=3.2e-10 Score=112.26 Aligned_cols=74 Identities=20% Similarity=0.358 Sum_probs=50.1
Q ss_pred eEEEEEeCCCCCCCh--------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccH
Q 008826 199 KRIAIVGDLGLTYNT--------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (552)
Q Consensus 199 ~rfavigD~~~~~~~--------------~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~ 264 (552)
+||+++||+|++... ..+++.+.+.++|+||++||++.. +. +..
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~------~~------------~~~---- 58 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHS------SR------------PSP---- 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSS------SS------------CCH----
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CCH----
Confidence 699999999986431 123444556899999999999842 11 111
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEecCCchhcc
Q 008826 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEA 294 (552)
Q Consensus 265 ~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~ 294 (552)
.....+.+.++.+. .++|+++++||||...
T Consensus 59 ~~~~~~~~~~~~l~~~~i~v~~i~GNHD~~~ 89 (333)
T d1ii7a_ 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCCS
T ss_pred HHHHHHHHHHhhHHhcCCcEEEeCCCCcccc
Confidence 12233455566653 5799999999999853
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.97 E-value=3.4e-10 Score=107.85 Aligned_cols=190 Identities=8% Similarity=0.009 Sum_probs=94.0
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHh-----CCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~-----~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~ 272 (552)
++|+++||+|..... .++++.+.+ .++|.++++||++.. |.. -.+..+
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~------G~~--------------------~~evi~ 54 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY--------------------PKEVIE 54 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC--------------------HHHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCC------CCC--------------------cHHHHH
Confidence 489999999965322 344555432 356999999999942 220 123455
Q ss_pred HHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCCCCCCCcceEEEEcCeEEEEEecccccCCCcHHHHHHHH
Q 008826 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 352 (552)
Q Consensus 273 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~ 352 (552)
.+..+..+.++++++||||..... +......+.. ....+ ..+.+. ..+ .........++.+||+
T Consensus 55 ~l~~l~~~~~v~~v~GNHD~~~~~-------~~~~~~~~~~----~~~~~---~~~~~~-~~~-~~~~~~~~~~~~~~l~ 118 (251)
T d1nnwa_ 55 VIKDLTKKENVKIIRGKYDQIIAM-------SDPHATDPGY----IDKLE---LPGHVK-KAL-KFTWEKLGHEGREYLR 118 (251)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHHH-------SCTTCSSSGG----GGGSS---CCHHHH-HHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCEEEEeccHHHHHHh-------ccccccccch----hhhhc---cchhHH-Hhh-HHHhhhcCHHHHHHHH
Confidence 556665567899999999964210 0000000000 00000 000000 000 0000012345666765
Q ss_pred HHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeeccccccCCCCcEEE
Q 008826 353 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431 (552)
Q Consensus 353 ~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyi 431 (552)
+...........-.+++.|.++........... .....+...+... +++++++||+|.-.... .++..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~H~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~--------~~~~~~i 189 (251)
T d1nnwa_ 119 DLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVV 189 (251)
T ss_dssp TSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEE
T ss_pred hcccceEEeeCCCcEEEEecCccCcccchhhhh-hHHHHHhhhcccccCceEEEEeccceEEEEE--------eeeeecc
Confidence 543322111111246666766544322211110 1112233334434 68999999999744332 3578889
Q ss_pred EECCCCCc
Q 008826 432 TIGDGGNL 439 (552)
Q Consensus 432 v~G~gG~~ 439 (552)
..|+-|..
T Consensus 190 n~Gsvg~~ 197 (251)
T d1nnwa_ 190 CPGSVGFP 197 (251)
T ss_dssp EECCSSSC
T ss_pred cccccccc
Confidence 99998764
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.95 E-value=1.8e-08 Score=91.55 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEEEEECCCCCc
Q 008826 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 439 (552)
Q Consensus 391 ~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyiv~G~gG~~ 439 (552)
.+..++.+.++|++++||+|...... -+|+++|..|+-|..
T Consensus 93 ~l~~~~~~~~~dvvi~GHTH~p~~~~--------~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 93 KLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQP 133 (173)
T ss_dssp HHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSC
T ss_pred HHHHHHHhcCCCEEEeCCcCcceEEE--------ECCEEEEECCCCCCC
Confidence 45667778899999999999765442 258999999998864
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.47 E-value=1.8e-07 Score=84.92 Aligned_cols=38 Identities=11% Similarity=0.274 Sum_probs=29.6
Q ss_pred eEEEEEeCCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008826 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (552)
Q Consensus 199 ~rfavigD~~~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y 236 (552)
+||+++||+|..... .++++.+.+.++|.++++||++.
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~ 40 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLN 40 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccc
Confidence 699999999965322 44566666679999999999984
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.34 E-value=7.7e-07 Score=81.61 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=33.7
Q ss_pred EEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008826 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (552)
Q Consensus 366 ~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 413 (552)
.|+++|.|+.......+. .....+..+..+.+++++|+||+|...
T Consensus 108 ~i~l~H~P~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCccccccccc---cchhHHHHHHHhcCceEEEEeeccCCc
Confidence 689999998655433222 334577788899999999999999643
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.29 E-value=2.2e-06 Score=85.70 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=95.9
Q ss_pred CceEEEEEeCCCCCCC--------h---HHHHHHHH----hCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCccc
Q 008826 197 YPKRIAIVGDLGLTYN--------T---TCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (552)
Q Consensus 197 ~~~rfavigD~~~~~~--------~---~~~l~~l~----~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~ 260 (552)
..++|++.+|+|.... . ...++++. +.+++ ++|.+||++....+ .
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~-------------------s 67 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 67 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHH-------------------H
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHH-------------------H
Confidence 4689999999995421 1 12344443 35565 56669999842111 0
Q ss_pred cccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCC-------CC-CCCcceEEEEcCeEEE
Q 008826 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE-------SG-SLSSFYYSFNAGGIHF 332 (552)
Q Consensus 261 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~-~~~~~yYsf~~G~v~f 332 (552)
..+ +.....+.|+.+ ..- ..++||||+.. +...+..+.....+|.-. .+ ..-..|.-++.+++++
T Consensus 68 ~~~--~g~~~~~~mn~~--g~D-a~~~GNHEfd~--G~~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kV 140 (337)
T d1usha2 68 DLQ--DAEPDFRGMNLV--GYD-AMAIGNHEFDN--PLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (337)
T ss_dssp HTT--TTHHHHHHHHHH--TCC-EEECCGGGGSS--CHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred HHh--CChHHHHHHHhc--CCe-EEEechhhhcc--chHHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEE
Confidence 001 112334455544 222 46689999953 223444445555544211 01 1234566678888665
Q ss_pred --EEeccccc-------------CCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHH
Q 008826 333 --IMLGAYIS-------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLY 397 (552)
Q Consensus 333 --I~Ldt~~~-------------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~ 397 (552)
|.+-+... +....+..+...++|++. .+...+|++.|.+............ ....+...+.
T Consensus 141 gviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~ 216 (337)
T d1usha2 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALP 216 (337)
T ss_dssp EEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSC
T ss_pred EeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCc
Confidence 55532110 011223333334455543 2456799999998754321110000 0123333334
Q ss_pred HcCCcEEEEccccCc
Q 008826 398 SYGVDIVFNGHVHAY 412 (552)
Q Consensus 398 ~~~VdlvlsGH~H~y 412 (552)
..+||+++.||+|..
T Consensus 217 ~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 217 AGSLAMIVGGHSQDP 231 (337)
T ss_dssp TTSSSEEECCSSCCB
T ss_pred ccCceEEecCccCcc
Confidence 458999999999964
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.03 E-value=6.1e-05 Score=74.39 Aligned_cols=180 Identities=20% Similarity=0.222 Sum_probs=88.2
Q ss_pred ceEEEEEeCCCCCCC--------------hHHHHHHH----HhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 198 PKRIAIVGDLGLTYN--------------TTCTINHM----SSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 198 ~~rfavigD~~~~~~--------------~~~~l~~l----~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
.++|++.+|+|.... ..+....+ .+.+++ +++.+||++....+.+.
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~--------------- 75 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDI--------------- 75 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHS---------------
T ss_pred EEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhh---------------
Confidence 599999999996321 11222222 235676 56679999954321100
Q ss_pred cccccHHHHHHHHHHHHHhhhcCCe-EEecCCchhccccc-CcchHHhhhhcCCCCCCC--------C---CCCcceEEE
Q 008826 259 IHETYQPRWDYWGRFMQNLVSKVPI-MVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEES--------G---SLSSFYYSF 325 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~~~iP~-~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~~~--------~---~~~~~yYsf 325 (552)
+..+-....+.|+ .+++ ..++||||+..... ...+......+..|.-.+ + .....|..+
T Consensus 76 ----~~~~G~~~~~~mn----~lgyDa~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~ 147 (322)
T d3c9fa2 76 ----TSPNGLKSTPIFI----KQDYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYF 147 (322)
T ss_dssp ----SSSTTTTTHHHHT----TSCCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEE
T ss_pred ----cccCChHHHHHHh----ccCCcEEeecceecccchHHHHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEE
Confidence 0000001123333 3455 67889999853211 112222233444442111 1 123446566
Q ss_pred EcC--eEEEEEecccccCCC--------c---HHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHH
Q 008826 326 NAG--GIHFIMLGAYISYDK--------S---GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 392 (552)
Q Consensus 326 ~~G--~v~fI~Ldt~~~~~~--------~---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l 392 (552)
..+ ++.++.+........ . ..+..|+++.++ .+...+|++.|.++.... .+......
T Consensus 148 ~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~----~~~~~~~~-- 217 (322)
T d3c9fa2 148 TTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW----GEFYQVHQ-- 217 (322)
T ss_dssp ECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT----CHHHHHHH--
T ss_pred EECCCcEEEEEEeeccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc----cccchHHH--
Confidence 655 577887765322211 1 112245544443 356679999998864321 11112222
Q ss_pred HHHHHHc-CCc-EEEEccccC
Q 008826 393 EALLYSY-GVD-IVFNGHVHA 411 (552)
Q Consensus 393 ~~ll~~~-~Vd-lvlsGH~H~ 411 (552)
.+-+.. +++ ++|.||+|.
T Consensus 218 -~la~~~~~~~~~iigGHsH~ 237 (322)
T d3c9fa2 218 -YLRQFFPDTIIQYFGGHSHI 237 (322)
T ss_dssp -HHHHHCTTSEEEEEECSSCC
T ss_pred -HHHHhCCCCCEEEecccccc
Confidence 222232 344 699999996
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.79 E-value=0.00031 Score=68.43 Aligned_cols=173 Identities=18% Similarity=0.172 Sum_probs=91.7
Q ss_pred ceEEEEEeCCCCCCC------------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCCCcCCCCCCc
Q 008826 198 PKRIAIVGDLGLTYN------------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (552)
Q Consensus 198 ~~rfavigD~~~~~~------------------~~~~l~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~ 258 (552)
.++|++.+|+|.... ....++++.+.+++ +++-+||++.....
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~------------------ 63 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY------------------ 63 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH------------------
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh------------------
Confidence 478999999996431 12355666554554 78889999943210
Q ss_pred cccccHHHHHHHHHHHHHhhhcCCeEEecCCchhcccccCcchHHhhhhcCCCCCC-------C---CCCCcceEEEEcC
Q 008826 259 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE-------S---GSLSSFYYSFNAG 328 (552)
Q Consensus 259 ~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~---~~~~~~yYsf~~G 328 (552)
... .+.....+.|+.+ -.=..++||||+... ...+..+.....+|.-. . ...-..|...+.+
T Consensus 64 -~~~--~~g~~~~~~~n~~---gyDa~~~GNHEfd~G--~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~ 135 (302)
T d2z1aa2 64 -FNQ--YRGLADRYFMHRL---RYRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVG 135 (302)
T ss_dssp -HHH--HTTHHHHHHHHHT---TCCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEET
T ss_pred -Hhh--hcchhHHHHHHhc---ccccccccchhhhcC--hhHHHHHhhhcccceeEeeeeccccccccCccceeEEEEEC
Confidence 000 0111223344433 233678999999632 23333333333332110 0 1123446678889
Q ss_pred eEEEEEecccc-------------cCCCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHH
Q 008826 329 GIHFIMLGAYI-------------SYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEAL 395 (552)
Q Consensus 329 ~v~fI~Ldt~~-------------~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~l 395 (552)
++++-++.-.. .+....+..++..+.|++ .+..-+|++.|.... +. ..+
T Consensus 136 g~kIgiiG~~t~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~--------~d-------~~l 197 (302)
T d2z1aa2 136 GERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG--------ED-------LKL 197 (302)
T ss_dssp TEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------HH-------HHH
T ss_pred CeEEEEEecccccccccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc--------hh-------hHH
Confidence 87765554211 011233444555555554 344568999997531 11 123
Q ss_pred HHHc-CCcEEEEccccCcee
Q 008826 396 LYSY-GVDIVFNGHVHAYER 414 (552)
Q Consensus 396 l~~~-~VdlvlsGH~H~yeR 414 (552)
.++. +||++++||.|..-.
T Consensus 198 a~~~~giD~ii~gh~h~~~~ 217 (302)
T d2z1aa2 198 ARRLVGVQVIVGGHSHTLLG 217 (302)
T ss_dssp HTTCSSCCEEEECSSCCCBS
T ss_pred HhcCCCeeeeecCccceeec
Confidence 3333 799999999997543
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00044 Score=54.40 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=28.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLP 190 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p 190 (552)
...|+||+|+|.|.+||.+-+.. .+|+...|+|+|
T Consensus 58 ~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 58 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 46679999999999999755433 477888999987
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.26 E-value=0.00033 Score=55.73 Aligned_cols=35 Identities=31% Similarity=0.383 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
.++|+||+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 56 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 56 RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 5678999999999999964432 3678999999986
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.00098 Score=52.30 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=27.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
..+|++|+|+|.|.+||..-+. +.+|+...|+|+|
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpp 92 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPP 92 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCC
T ss_pred EEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCC
Confidence 4568999999999999964432 3678888999976
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.99 E-value=0.0032 Score=48.76 Aligned_cols=80 Identities=23% Similarity=0.218 Sum_probs=49.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+.-- +.+++.|+|...... ...-.|+|....+......... . ..+-.
T Consensus 3 aP~~l~v~~~-~~~sv~v~W~~p~~~-----------~~~y~v~y~~~~~~~~~~~~~~-----~----------~~~~~ 55 (92)
T d1tdqa2 3 APKNLRVGSR-TATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVLVP-----K----------GIGPT 55 (92)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEEEE-----C----------CSSSE
T ss_pred cCcCCEEEEe-cCCEEEEEEEecCCc-----------ccceEEEEEEcCCCcceeeEEE-----e----------cCCCe
Confidence 5788776544 478999999764321 1345678887654332211111 0 12245
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
..+.|+||+|+|.|.++|..-...+.|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 82 (92)
T d1tdqa2 56 TKTTLTDLVPGTEYGVGISAVMNSKQS 82 (92)
T ss_dssp EEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred eEEEECCccCCCEEEEEEEEEeCCCEe
Confidence 678999999999999999755433333
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.0031 Score=50.52 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=55.3
Q ss_pred CCCceeEEeec-CCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 74 FEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 74 ~~P~qi~l~~~-~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
..|..+.+... .+++++.|+|.-....-| + ...-.|.|....+...... ....+ .+
T Consensus 13 ~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g-------~-i~~Y~i~~~~~~~~~~~~~--~~~~~-------------~~ 69 (111)
T d1x5ka1 13 SPPKDVTVVSKEGKPKTIIVNWQPPSEANG-------K-ITGYIIYYSTDVNAEIHDW--VIEPV-------------VG 69 (111)
T ss_dssp SCCEEEEEEECSSCTTCEEEEEECCSCCSS-------C-CCEEEEEEESCSSSCTTTS--EEEEE-------------ST
T ss_pred CCCCCcEEEEecCCCCEEEEEEEccccCCC-------c-eeeeEEeeeecCCCCccee--EEEEe-------------CC
Confidence 35888877654 457899999986432211 1 1223556655443322110 00000 11
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
-.+...|++|+|++.|.+||...+. +.+|+...|+|..
T Consensus 70 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 70 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp TCSEEEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CeeEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 2245678999999999999975432 3578888998864
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=0.0028 Score=49.23 Aligned_cols=85 Identities=16% Similarity=0.184 Sum_probs=53.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-. +++++.|+|.-.... ...-.|+|.............. +..
T Consensus 4 aP~n~~~~~~-s~~si~l~W~~p~~~-----------~~~Y~i~y~~~~~~~~~~~~~~------------------~~~ 53 (92)
T d1qg3a1 4 APQNPNAKAA-GSRKIHFNWLPPSGK-----------PMGYRVKYWIQGDSESEAHLLD------------------SKV 53 (92)
T ss_dssp CCEEEEEEEC-STTCEEEEEECCSSC-----------CCEEEEEEEETTSCGGGCEEEE------------------ESS
T ss_pred cCCCCEEEEc-cCCEEEEEEEecCCC-----------ccceEEeeeeccccccEEEEec------------------CCc
Confidence 4778777654 478999999754211 1234677776554333221111 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~ 189 (552)
..+.|++|+|+|.|.+||..-+. +.+|+...++|.
T Consensus 54 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 54 PSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred cEEEECCCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 46778999999999999975432 257778888874
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0018 Score=51.40 Aligned_cols=88 Identities=15% Similarity=0.230 Sum_probs=53.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+++... +.+++.|+|......-| + ...=.|+|...++.......-. +..
T Consensus 6 ~p~~~~~~~~-s~~si~v~W~~P~~~~g-------~-i~~Y~v~y~~~~~~~~~~~~~~------------------~~~ 58 (98)
T d1x5la1 6 QVVVIRQERA-GQTSVSLLWQEPEQPNG-------I-ILEYEIKYYEKDKEMQSYSTLK------------------AVT 58 (98)
T ss_dssp CCCCEECSCB-CSSCEEEEECCCSCCCS-------C-CCEEEEEEEESSSCCSSCEEEE------------------ESS
T ss_pred CCCceEEEec-cCCEEEEEEECCCCCCC-------C-EEEEEEEeecccccceeeEEec------------------CCc
Confidence 4566665433 37899999986432211 1 1234577776554332211100 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~ 189 (552)
+...|+||+|+|+|.+||...+. +.||+...|+|.
T Consensus 59 ~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 59 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 46678999999999999864332 267888999985
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0015 Score=51.09 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=28.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p 190 (552)
..+.|++|+|+|.|.+||.+.+.. .+|+...|+|+|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 357789999999999999654322 567888999987
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0053 Score=49.39 Aligned_cols=91 Identities=18% Similarity=0.153 Sum_probs=53.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|+.+.+..-. +++|.|+|.-.....+. + ...=.|.|...+....... .. .....
T Consensus 13 ~P~~l~~~~~~-~~sv~lsW~~P~~~~~~------~-i~~Y~v~~~~~~~~~~~~~--------~~---------~~~~~ 67 (107)
T d1x5fa1 13 APRDVVASLVS-TRFIKLTWRTPASDPHG------D-NLTYSVFYTKEGIARERVE--------NT---------SHPGE 67 (107)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSCSSC------C-SSEEEEEEEETTCCCCEEE--------EC---------SSTTC
T ss_pred CCCccEEEEec-CCEEEEEEECCccCCCC------c-eEEEEEEEEeCCCCceEEE--------EE---------eCCCc
Confidence 68887765443 78999999763211110 0 1223566655443222111 00 01123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p 190 (552)
..+.|++|+|+|+|.+||...+.. .+|....++|.|
T Consensus 68 ~~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 68 MQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 568899999999999999765533 346777888765
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0031 Score=50.05 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=27.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
...|++|+|++.|.|||...+. ..+|+.-.++|+|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 4578999999999999975543 2577888898876
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0027 Score=50.20 Aligned_cols=88 Identities=15% Similarity=0.169 Sum_probs=54.6
Q ss_pred CCceeEEeecC-CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~-~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|.++.|+... .++++.|+|.-... .. ...=.|+|...++...... ... ++-
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~---~~-------i~~Y~i~y~~~~~~~~~~~----~~v-------------~~~ 54 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQP---SH-------ISKYILRWRPKNSVGRWKE----ATI-------------PGH 54 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSS---SC-------EEEEEEEEEETTCSSCCEE----EEE-------------CSS
T ss_pred cCcccEEEEccCCCCEEEEEeecccc---cc-------eeEEEEEEeeccccceeee----ecc-------------CCC
Confidence 47888887765 46899999987431 00 1234677876544322110 000 123
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~ 189 (552)
...+.|+||+|||.|..+|..-...+.|+ ...|+|.
T Consensus 55 ~~~~~l~gL~P~t~Y~v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 55 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp CCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEEC
T ss_pred ccEEEECCcccCcEEEEEEEEEeCCCccCcEEEEEEec
Confidence 45679999999999999987544334443 5677774
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.0036 Score=49.58 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=54.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.++.-. .+++.|+|......-+.. ..-.-.|+|....+..... ... ..+..-
T Consensus 5 pP~~l~v~~~~-~~s~~l~W~~p~~~~~~~------~~~~~~v~~~~~~~~~~~~-~~~---------------~~~~~~ 61 (104)
T d2b5ib2 5 APISLQVVHVE-THRCNISWEISQASHYFE------RHLEFEARTLSPGHTWEEA-PLL---------------TLKQKQ 61 (104)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSCCGGGT------TCEEEEEEEECTTSCSTTS-CCE---------------EECSCC
T ss_pred CCCCcEEEEEe-CCEEEEEEcccccccccc------ceeEEEEEEecccccceee-eEE---------------ecCCCc
Confidence 58888876665 689999998754311100 0012346665554322110 000 001123
Q ss_pred EEEEeCCCCCCCEEEEEEecCC--C-----CCCCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS--I-----PAMSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~--~-----~~~S~~~~F~T~p 190 (552)
..+.|+||+|+|.|.+||.+.. + +.||....|+|.|
T Consensus 62 ~~~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 62 EWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 4578899999999999986421 1 2567789999986
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.005 Score=48.35 Aligned_cols=89 Identities=10% Similarity=0.073 Sum_probs=52.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++++.-..+.++|.|+|.-... +....=.|+|....+...... .... ++..
T Consensus 4 PP~~l~v~~~~~ts~i~v~W~~p~~----------~~i~~Y~v~y~~~~~~~~~~~---~~~~-------------~~~~ 57 (94)
T d1fnfa1 4 PPTNLHLEANPDTGVLTVSWERSTT----------PDITGYRITTTPTNGQQGNSL---EEVV-------------HADQ 57 (94)
T ss_dssp CCEEEEEEECSSSSCEEEEEECCSC----------SSCCEEEEEEEETTTCSSCCE---EEEE-------------CTTC
T ss_pred cCcCcEEEEecCCCEEEEEeeCCCC----------CCeeEEEEEEEEecccCceEE---EEEe-------------CCCc
Confidence 4888888755556679999975321 111234577876544322111 0000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCceEEEEcC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTL 189 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~~~~F~T~ 189 (552)
..+.|+||+|||.|..+|..-...+.|...+.+..
T Consensus 58 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~p~s~t~~ 92 (94)
T d1fnfa1 58 SSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTII 92 (94)
T ss_dssp CEEECCCCCTTSCEEEEEEEEETTEECCCEEEEEC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCEeCCEEEEEE
Confidence 57889999999999999976544455654444433
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.68 E-value=0.0045 Score=48.46 Aligned_cols=83 Identities=14% Similarity=0.168 Sum_probs=46.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-- +++++.|+|.......+..+ ..=.|+|............. .. .+..
T Consensus 9 ~P~~~~v~~~-s~tsv~l~W~~P~~~~~~~i-------~gY~i~y~~~~~~~~~~~~~---~~-------------~~~~ 64 (95)
T d2ibga1 9 VPELLEIEEY-SETAVVLHWSLASDADEHLI-------TGYYAYYRPSSSAGEYFKAT---IE-------------GAHA 64 (95)
T ss_dssp CCEECCCBCC-SSSCEEEEEECCTTCCGGGC-------CEEEEEEEETTCCSCCEEEE---EE-------------CTTC
T ss_pred CCcCeEEEEe-CCCEEEEEEEeeeeccCCcc-------cccceeEeeeeecceeeeee---cc-------------CCce
Confidence 4766655433 36899999975322111101 12357787654433211110 00 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
+...|+||+|+|.|.+||..-+..+.|
T Consensus 65 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s 91 (95)
T d2ibga1 65 RSFKIAPLETATMYEFKLQSFSAASAS 91 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEECSSCBC
T ss_pred eEEEEeeccCCeEEEEEEEEEeCCccC
Confidence 467899999999999999865533333
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0044 Score=50.07 Aligned_cols=79 Identities=20% Similarity=0.259 Sum_probs=43.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.- -+.+++.|+|.-.. .-|..+ ..=.|+|............... . +..
T Consensus 12 ~~P~~~~v~~-~~~~sv~l~W~p~~-~~g~~I-------~~Y~v~~~~~~~~~~~~~~~~~--~-------------~~~ 67 (108)
T d1x4za1 12 EAPDRPTIST-ASETSVYVTWIPRG-NGGFPI-------QSFRVEYKKLKKVGDWILATSA--I-------------PPS 67 (108)
T ss_dssp CCCCCCEEEE-CCSSEEEEECCCCC-CTTSCC-------CEEEEEEEESSSCCCCEEEEEE--E-------------CTT
T ss_pred ccCCCCEEEE-ccCCEEEEEEECCC-CCCCcc-------EEEEEEEEecCCCCceEEEEEe--e-------------cCC
Confidence 3566666543 34789999994322 111111 2345677665443222111110 0 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
.....|+||+|+|.|.|||.+-+
T Consensus 68 ~~~~~v~~L~p~t~Y~frV~A~N 90 (108)
T d1x4za1 68 RLSVEITGLEKGISYKFRVRALN 90 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEC
Confidence 24567899999999999997654
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.008 Score=47.86 Aligned_cols=92 Identities=12% Similarity=0.044 Sum_probs=53.6
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+....+++.+.|+|.......+. ....=.|+|.......... .... ..-
T Consensus 6 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~-------~~~~Y~v~y~~~~~~~~~~----~~~~-------------~~~ 61 (105)
T d1erna2 6 DAPVGLVARLADESGHVVLRWLPPPETPMT-------SHIRYEVDVSAGNGAGSVQ----RVEI-------------LEG 61 (105)
T ss_dssp CCCEEEEEEECCC-CCEEEEEECSSSCSCG-------GGEEEEEEEEEC-CCCEEE----EEEE-------------CTT
T ss_pred CCCCCCEEEEecCCCcEEEEeeeccccccc-------eEEEEEEEEecCCCCCceE----EEee-------------cCC
Confidence 358999998888788899999874321110 0012356666554322211 1100 001
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC-----C---CCCCceEEEEcC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS-----I---PAMSDVYYFRTL 189 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~-----~---~~~S~~~~F~T~ 189 (552)
-..+.|.+|+|+|.|.+||.+.. . +.||+..+++|+
T Consensus 62 ~t~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 62 RTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred ccEEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 13567899999999999996531 1 256667777774
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.53 E-value=0.0063 Score=48.58 Aligned_cols=80 Identities=16% Similarity=0.110 Sum_probs=47.5
Q ss_pred CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEEEEEeCCCCCC
Q 008826 86 NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPN 165 (552)
Q Consensus 86 ~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~ 165 (552)
+++++.|+|.-.....|. ...-.|+|....+......... + .+-.+...|.+|+|+
T Consensus 19 ~~~~v~l~W~pp~~~~~~--------~~~y~i~y~~~~~~~~~~~~~~---~-------------~~~~~~~~i~~L~p~ 74 (105)
T d2d9qb2 19 QAGCLQLSWEPWQPGLHI--------NQKCELRHKPQRGEASWALVGP---L-------------PLEALQYELCGLLPA 74 (105)
T ss_dssp CCSCEEEEEECCGGGTTS--------CEEEEEEEEESSSCCCCEEEEE---E-------------CSCEEEEEECSCCSC
T ss_pred CCCeEEEEEcCCCCCCce--------eEEEEEEEEecCCccceeeeec---c-------------cCCcceeEEecccCC
Confidence 478999999865432111 1234577776543322211110 0 223466789999999
Q ss_pred CEEEEEEecCCC------CCCCceEEEEcC
Q 008826 166 NKYYYQCGDPSI------PAMSDVYYFRTL 189 (552)
Q Consensus 166 T~Y~Y~v~~~~~------~~~S~~~~F~T~ 189 (552)
|.|.+||..... +.||...+++|.
T Consensus 75 t~Y~frVra~n~~g~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 75 TAYTLQIRCIRWPLPGHWSDWSPSLELRTT 104 (105)
T ss_dssp CCEEEEEEEEECSSCCCCCCCCCCEEECCC
T ss_pred eEEEEEEEEEeCCCCCCCcCCCCCEEEeCC
Confidence 999999854211 247777777763
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.53 E-value=0.0044 Score=47.89 Aligned_cols=77 Identities=19% Similarity=0.146 Sum_probs=47.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+.--. .+++.|+|...... ...=.|+|............ +. ...
T Consensus 3 ~P~~l~v~~v~-~~s~~l~W~~~~~~-----------~~~Y~i~~~~~~~~~~~~~~-----~~-------------~~~ 52 (88)
T d1qr4a2 3 SPKGISFSDIT-ENSATVSWTPPRSR-----------VDSYRVSYVPITGGTPNVVT-----VD-------------GSK 52 (88)
T ss_dssp CCSCEEEESCC-SSCEEEEECCCSSC-----------CSEEEEEEEETTCCCCEEEE-----EE-------------TTC
T ss_pred CCcceEEEEec-CCEEEEEEEcccEe-----------eceEEEEEEeccCCceEEEE-----ec-------------CCc
Confidence 47776665443 78999999754321 12446778776554332211 00 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
..+.|+||+|+|.|.++|..-...+.|
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 79 (88)
T d1qr4a2 53 TRTKLVKLVPGVDYNVNIISVKGFEES 79 (88)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEEC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCc
Confidence 467899999999999999755433344
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.49 E-value=0.02 Score=53.18 Aligned_cols=189 Identities=14% Similarity=0.157 Sum_probs=104.8
Q ss_pred eEEEEEeCCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 199 ~rfavigD~~~~~~~---~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
+||+++||.=....- .+.+..+. .+.||||..|.++- .|.+.- + +.+.++++
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa------~G~Git---------------~---~~~~~l~~ 55 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIR-PQFDFVIVNMENSA------GGFGMH---------------R---DAARGALE 55 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHG-GGCSEEEEECTBTT------TTSSCC---------------H---HHHHHHHH
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHH-hhCCEEEECCccCC------CCcCCC---------------H---HHHHHHHH
Confidence 589999998433211 23344443 46899999999983 343210 1 12222222
Q ss_pred HhhhcCCeEEecCCchhcccccCcchHHhhh----hcCCCCCC--CCCCCcceEEEEcCeEEEEEecc--cccCCCcHHH
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS----RFAFPSEE--SGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQ 347 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~----~f~~P~~~--~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q 347 (552)
..+- ..+.|||=+.. +....|.. +..-|.+- .+..+..|+.|+..+.++.+++- +..-.....-
T Consensus 56 ---~GvD-viT~GNH~wdk----kei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~P 127 (255)
T d1t70a_ 56 ---AGAG-CLTLGNHAWHH----KDIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp ---HTCS-EEECCTTTTSS----TTHHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred ---cCCc-EEEcCchhhcc----hhHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCH
Confidence 3454 46789998752 22333331 23334332 23456678888888766666653 3221222223
Q ss_pred HHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCC
Q 008826 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (552)
Q Consensus 348 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G 427 (552)
++-+++.|++. +.+.+||=+|.=. .....+| -.+.+-+|.+|+-=|+|.- ..+..+-|+|
T Consensus 128 F~~~d~~l~~~---~~~~i~VDfHaEa-----------TSEK~A~-g~~ldGrvsav~GTHTHV~-----TaD~rIlp~G 187 (255)
T d1t70a_ 128 FRTMDALLERD---DLGTVFVDFHAEA-----------TSEKEAM-GWHLAGRVAAVIGTHTHVP-----TADTRILKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC-----------HHHHHHH-HHHHTTSSSEEEEESSCSC-----BSCCEEETTT
T ss_pred HHHHHHHHhhc---CCCeEEEEccchh-----------HHHHHHH-HhhhcCcEEEEEecCcccc-----cccceEecCC
Confidence 44456666653 4556888888421 1112233 3344568999999999952 2222233789
Q ss_pred cEEEE-ECCCCCcc
Q 008826 428 PVHIT-IGDGGNLE 440 (552)
Q Consensus 428 ~vyiv-~G~gG~~~ 440 (552)
+-|++ +|.-|...
T Consensus 188 Tay~TDvGMtG~~~ 201 (255)
T d1t70a_ 188 TAYQTDAGFTGPHD 201 (255)
T ss_dssp EEEESCCCCBEESS
T ss_pred cEEEecCccccchh
Confidence 99987 46666643
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.47 E-value=0.0033 Score=49.56 Aligned_cols=92 Identities=22% Similarity=0.215 Sum_probs=51.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+..-. +++|.|+|.......+.... ....-.|+|...+........ . ....
T Consensus 4 pP~~v~~~~~s-~tsi~v~W~~p~~~~~~~~~----~~~~y~v~~~~~~~~~~~~~~-----~-------------~~~~ 60 (100)
T d1x5ja1 4 PPVGVQASILS-HDTIRITWADNSLPKHQKIT----DSRYYTVRWKTNIPANTKYKN-----A-------------NATT 60 (100)
T ss_dssp CCEEEEEEEEE-TTEEEEEEECTTSCSSSCCC----SSCEEEEEECBSSSSSCCCEE-----C-------------CBCS
T ss_pred CCcCeEEEEec-CCEEEEEEcCCcccccccee----eEEEEEEEeeecCCCcceeEe-----c-------------CCCc
Confidence 47777665443 89999999864221111100 001234566555443321110 0 0011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~ 189 (552)
..++|+||+|+|.|.+||...+. +.+|....++|.
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 61 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp SEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 24678999999999999975432 256777777774
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.46 E-value=0.0084 Score=46.26 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=47.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.+++++-- +.+++.|+|.-.... ...-.|+|...++...... ... ++-.
T Consensus 4 ~P~~l~v~~~-s~~s~~l~W~~p~~~-----------~~~y~v~~~~~~~~~~~~~----~~~-------------~~~~ 54 (90)
T d1tena_ 4 APSQIEVKDV-TDTTALITWFKPLAE-----------IDGIELTYGIKDVPGDRTT----IDL-------------TEDE 54 (90)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCTTCCEE----EEE-------------ETTC
T ss_pred CCCCcEEEEe-cCCEEEEEEEeCceE-----------eccEEEEEEEcCCCceeEE----EEe-------------cCCc
Confidence 5888887633 478999999753321 1245678876554322211 010 0122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
..+.|.||+|||.|.++|..-...+.|
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 81 (90)
T d1tena_ 55 NQYSIGNLKPDTEYEVSLISRRGDMSS 81 (90)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred ceeeEeeecCCCEEEEEEEEEeCCCEe
Confidence 467899999999999999755433333
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.46 E-value=0.0059 Score=47.65 Aligned_cols=88 Identities=23% Similarity=0.222 Sum_probs=52.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+. ..+.+++.|+|.-.... |..+ ..=.|+|....+....... ..+..
T Consensus 3 ~P~~~~~~-~~~~~sv~l~W~~p~~~-~~~I-------~~Y~i~~~~~~~~~~~~~~------------------~~~~~ 55 (93)
T d2vkwa2 3 APKLEGQM-GEDGNSIKVNLIKQDDG-GSPI-------RHYLVRYRALSSEWKPEIR------------------LPSGS 55 (93)
T ss_dssp CCEEEEEE-CTTSSCEEEEEECCCCT-TSCC-------CEEEEEEEETTSCCCCCEE------------------ECTTC
T ss_pred CCccCEeE-EcCCCEEEEEeeCCCCC-cCce-------EEEEEEeeecCcceeeeee------------------ccCCc
Confidence 46665443 44578999999875421 1111 2345777766543221110 01122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~ 189 (552)
..+.|+||+|+|.|.+||.+-+..+.|+ ...|+|.
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 56 DHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred eEEEEeccccceEEEEEEEEEcCCCCcCCEeEEEEec
Confidence 3577899999999999997655444443 5678774
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.0065 Score=48.18 Aligned_cols=93 Identities=16% Similarity=0.150 Sum_probs=53.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|....+. ...+++.|+|.-....-|..+ ..=.|+|...++..+....... . ....-
T Consensus 5 ~P~~~~~~--~~~~sv~l~W~~P~~~gg~~I-------~~Y~v~~~~~~~~~~~~~~~~~---~-----------~~~~~ 61 (101)
T d2haza1 5 SPSIDQVE--PYSSTAQVQFDEPEATGGVPI-------LKYKAEWRAVGEEVWHSKWYDA---K-----------EASME 61 (101)
T ss_dssp CCEEEEEE--ECSSCEEEEEECCSCCTTSCC-------CEEEEEEEETTCCCCEEEEEEH---H-----------HHHHH
T ss_pred CCccCEEE--eeCCEEEEEEeCCCcCccccE-------EEEEEEEeecCCcceeeeeeee---e-----------cccce
Confidence 56433333 335789999996432212111 2335677765544332111110 0 00111
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
..+.|+||+|+|.|++||.+.+. +.+|+.-.|+|.|
T Consensus 62 ~~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 62 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred eEEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 35788999999999999965442 2577888999987
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.37 E-value=0.0075 Score=46.29 Aligned_cols=83 Identities=17% Similarity=0.132 Sum_probs=49.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++++.-- +.+++.|+|.-.... ...-.|+|......... ... + ...
T Consensus 2 aP~~l~v~~~-t~~sv~v~W~~p~~~-----------~~~Y~v~~~~~~~~~~~------~~~----~---------~~~ 50 (87)
T d1qr4a1 2 NPKDLEVSDP-TETTLSLRWRRPVAK-----------FDRYRLTYVSPSGKKNE------MEI----P---------VDS 50 (87)
T ss_dssp CCEEEEEESC-CSSEEEEEEECCSSC-----------CSEEEEEEECTTCCEEE------EEE----C---------TTC
T ss_pred cCcCcEEEEe-cCCEEEEEEECCCCC-----------cceeEEEeecCCcceeE------EeC----C---------CCc
Confidence 4778777533 378999999864321 12346788765432111 110 0 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T 188 (552)
..+.|+||+|+|.|.++|..-...+.|+ ..+++|
T Consensus 51 ~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~T 86 (87)
T d1qr4a1 51 TSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGST 86 (87)
T ss_dssp SEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEEC
T ss_pred CEEEECCCCcCCEEEEEEEEEcCCCCccCEEEEEEc
Confidence 4678999999999999997554333443 334444
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.011 Score=45.45 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=47.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.++-- +++++.|+|.-.... ...=.|+|............ .. ++-.
T Consensus 3 ~P~~l~v~~v-t~~sv~l~W~~p~~~-----------~~~Y~i~~~~~~~~~~~~~~----~v-------------~~~~ 53 (89)
T d1fnfa3 3 SPTGIDFSDI-TANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRED----RV-------------PHSR 53 (89)
T ss_dssp CCEEEEEESC-CSSEEEEEEECCSSC-----------CSEEEEEEECSCCSSCCEEE----EE-------------ETTC
T ss_pred cCcCCEEEEe-cCCEEEEEEEeCCCE-----------EeeEEEEEEECCCCCceEEE----EE-------------CCCc
Confidence 4788776632 479999999764321 12345788776544332110 00 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
..+.|++|+|+|.|.++|..-...+.|
T Consensus 54 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 80 (89)
T d1fnfa3 54 NSITLTNLTPGTEYVVSIVALNGREES 80 (89)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEEC
T ss_pred cEEEECCCcccCEEEEEEEEEcCCcCc
Confidence 467889999999999999765433333
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.0067 Score=48.07 Aligned_cols=87 Identities=14% Similarity=0.073 Sum_probs=51.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++++.- -+++++.|+|...... ...=.|+|...++.... . .. .+-.
T Consensus 3 ~P~~l~~~~-~t~~si~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~-~-----~~-------------~~~~ 51 (102)
T d2cuha1 3 GPTQLRALN-LTEGFAVLHWKPPQNP-----------VDTYDIQVTAPGAPPLQ-A-----ET-------------PGSA 51 (102)
T ss_dssp SCEEEECCC-CSSSCEEEEEECCSSC-----------CSEEEEEEECSSSCCEE-E-----EE-------------ETTC
T ss_pred CCCccEEEE-eCCCEEEEEEEeeecc-----------ceeeEEEEEecccccee-e-----ee-------------eeee
Confidence 477766642 2478999999764321 12346777665432211 0 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC--ceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S--~~~~F~T~p~~ 192 (552)
..+.|+||+|||.|.++|..-...+.| ....|+|.+.+
T Consensus 52 ~~~~l~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 52 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp SEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred eeEEEccEEeeEEEEEEEEEEeCCCCcCCEEEEEECCCCC
Confidence 367799999999999999754433333 35578887653
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.011 Score=45.42 Aligned_cols=85 Identities=16% Similarity=0.094 Sum_probs=48.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.++-- +++++.|+|.-.... ...-.++|............ . . + .-.
T Consensus 2 pP~~l~~~~v-~~~si~l~W~~p~~~-----------~~~~~i~~~~~~~~~~~~~~-~--~-----~---------~~~ 52 (90)
T d1fnha1 2 APTDLKFTQV-TPTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKEI-N--L-----A---------PDS 52 (90)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSC-----------CSEEEEEEEESSSCSCCCEE-E--E-----C---------TTC
T ss_pred CCCCEEEEEe-cCCEEEEEEEcccee-----------ccceEEEEEeeeCCCceEEE-E--e-----C---------CCC
Confidence 4777776543 489999999764321 12345677655432221110 0 0 0 011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T 188 (552)
-..+|+||+|||.|++||..-+..+.|+ .-.|+|
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~~~~~~~T 88 (90)
T d1fnha1 53 SSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTT 88 (90)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred eEEEEecccCceEEEEEEEEEeCCCCcCCEeEEEEc
Confidence 3578999999999999997654333332 334555
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.0057 Score=48.68 Aligned_cols=86 Identities=20% Similarity=0.185 Sum_probs=50.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-- +++++.|+|......-| + ...=.|+|...+......... + .
T Consensus 13 ~P~~l~v~~~-s~~si~l~W~~P~~~~g-------~-i~~Y~v~~~~~~~~~~~~~~~------------------~--~ 63 (103)
T d1x5ga1 13 PAPNLRAYAA-SPTSITVTWETPVSGNG-------E-IQNYKLYYMEKGTDKEQDVDV------------------S--S 63 (103)
T ss_dssp CCSSCEEEEE-ETTEEEEECCCCSCCSS-------C-CSEEEEEEEETTCCCCCCEEE------------------C--S
T ss_pred cCCCcEEEEc-cCCEEEEEEECCcCCCc-------c-EEEEEEEEEeCCCceeEEEec------------------c--c
Confidence 4666665433 37899999975432111 1 012346666654433221110 0 1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~ 189 (552)
..+.|+||+|+|.|.++|..-+. +.+|+...++|+
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 64 HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred cEEecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 24678999999999999964432 246677778775
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.30 E-value=0.043 Score=50.74 Aligned_cols=189 Identities=19% Similarity=0.285 Sum_probs=102.8
Q ss_pred eEEEEEeCCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHHHH
Q 008826 199 KRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (552)
Q Consensus 199 ~rfavigD~~~~~~~---~~~l~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~l~ 275 (552)
+||+++||.=....- ...+.++. .+.||||..|.++- .|.+.. +. .+.+++
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk-~~~DfVIaNgENaa------~G~Git---------------~k---~~~~L~- 54 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIR-DRYDLVIANGENAA------RGKGLD---------------RR---SYRLLR- 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHG-GGCSEEEEECTTTT------TTSSCC---------------HH---HHHHHH-
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHH-hhCCEEEEeeeccC------CCcCCC---------------HH---HHHHHH-
Confidence 589999998433211 22344443 46899999999983 343210 11 122222
Q ss_pred HhhhcCCeEEecCCchhcccccCcchHHhhh--hcCCCCCC-CCCCCcceEEEEcCeEEEEEecc--cccCCCcHHHHHH
Q 008826 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS--RFAFPSEE-SGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYKW 350 (552)
Q Consensus 276 ~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~--~f~~P~~~-~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~W 350 (552)
...+- ..+.|||=+... + ...|.+ +.-.|.+- .+..+..|+.|+.++.++.++|- +..-.....-++-
T Consensus 55 --~~GVD-vIT~GNH~wdkk---e-i~~~i~~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~ 127 (252)
T d2z06a1 55 --EAGVD-LVSLGNHAWDHK---E-VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp --HHTCC-EEECCTTTTSCT---T-HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred --HhCCC-EEEcCcccccch---h-hhhhhccccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHH
Confidence 23454 467899987532 2 222322 22233332 23345668888888877776663 2211122222333
Q ss_pred HHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccccccCCCCcEE
Q 008826 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (552)
Q Consensus 351 L~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vy 430 (552)
+++.|++ .+++.+||=+|.=. .....+| ..+.+-+|.+|+-=|+|.- ..+..+-|+|+-|
T Consensus 128 ~d~~~~~---~~~~~i~VDfHaEa-----------TSEK~A~-g~~ldGrvsavvGTHTHV~-----TaD~rILp~GTay 187 (252)
T d2z06a1 128 LDRLLEE---EKADYVLVEVHAEA-----------TSEKMAL-AHYLDGRASAVLGTHTHVP-----TLDATRLPKGTLY 187 (252)
T ss_dssp HHHHHHH---CCCSEEEEEEECSC-----------HHHHHHH-HHHHBTTBSEEEEESSCSC-----BSCCEECTTSCEE
T ss_pred HHHHHhh---cCccEEEEEcccch-----------hhhheee-eEecCCCEEEEEecCcccc-----ccccEEecCCeEE
Confidence 3444444 24567888888421 1112233 3344568999999999952 2222334789999
Q ss_pred EE-ECCCCCcc
Q 008826 431 IT-IGDGGNLE 440 (552)
Q Consensus 431 iv-~G~gG~~~ 440 (552)
++ +|.-|...
T Consensus 188 iTDvGM~G~~~ 198 (252)
T d2z06a1 188 QTDVGMTGTYH 198 (252)
T ss_dssp ESCCCCBEESS
T ss_pred EccCccccchh
Confidence 97 47776643
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.24 E-value=0.016 Score=45.55 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=53.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+..- ++++|.|+|......... ++. ..=.|.|....+.......-.. . .+..
T Consensus 4 ~P~~~~~~~~-s~tsi~v~W~~~~~~~~~-----~~i-~~Y~v~y~~~~~~~~~~~~~~~--~-------------~~~~ 61 (101)
T d1x4ya1 4 GPYITFTDAV-NETTIMLKWMYIPASNNN-----TPI-HGFYIYYRPTDSDNDSDYKKDM--V-------------EGDR 61 (101)
T ss_dssp CCEEEEEECS-SSSCEEEEEECCCTTSCC-----CCC-CEEEEEECCTTSCSGGGCCCEE--E-------------ETTC
T ss_pred CCcccEEEEE-cCCEEEEEEecCcccccc-----cce-EEEEEEeeeccceeeeeeeEEE--E-------------cCCe
Confidence 5777766544 478999999864322110 000 1224667665433221110000 0 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
....|.+|+|++.|.+||..-+. ..+|+...++|..
T Consensus 62 ~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 62 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred eEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 34568999999999999865432 3688889998853
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.012 Score=45.59 Aligned_cols=85 Identities=16% Similarity=0.223 Sum_probs=50.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.- -+++++.|+|...... ...-.|.|...+... . .... +...
T Consensus 4 ~P~~l~~~~-~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~-~-----~~~~-------------~~~~ 52 (93)
T d2cuma1 4 APRDLEAKE-VTPRTALLTWTEPPVR-----------PAGYLLSFHTPGGQT-Q-----EILL-------------PGGI 52 (93)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCSSC-----------CSEEEEEEECTTSCE-E-----EEEE-------------CSSC
T ss_pred cCCCCEEEE-eCCCEEEEEEEccccc-----------cccEEEEEEcccccc-E-----EEEE-------------CCCc
Confidence 477766543 2478999999864321 134567787654321 1 1110 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p 190 (552)
..+.|+||+|||.|.++|..-...+.|. .-.|+|..
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 53 TSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp SEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred cEEEEeCccCCCEEEEEEEEEeCCCCCCCEEEEEEeCC
Confidence 3577999999999999997654444443 34676643
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.20 E-value=0.01 Score=45.87 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=23.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC----CCCCceEEEEc
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI----PAMSDVYYFRT 188 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~----~~~S~~~~F~T 188 (552)
..+++||+|+|+|.|||..-+. ..+|+...++|
T Consensus 52 ~~~~~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 52 TATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred EEEECCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 3568999999999999974321 24566666665
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.19 E-value=0.012 Score=47.01 Aligned_cols=78 Identities=14% Similarity=0.085 Sum_probs=46.1
Q ss_pred CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCC-CCceEEEEEEEEeeeecccCCccccccCeEEEEEeCCCCC
Q 008826 86 NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEP 164 (552)
Q Consensus 86 ~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P 164 (552)
.++++.|+|......-+. ...-.|+|....+ ..+..+.-. ..-.+..+|.+|+|
T Consensus 20 ~~~~i~v~W~pp~~~~~~--------~~~Y~i~y~~~~~~~~w~~v~~~-----------------~~~~~~~~l~~L~p 74 (106)
T d1cd9b2 20 QPGCLWLSWKPWKPSEYM--------EQECELRYQPQLKGANWTLVFHL-----------------PSSKDQFELCGLHQ 74 (106)
T ss_dssp CCSCEEEEEECCGGGTTS--------CEEEEEEEEESSTTCCCEEEEEE-----------------ESCEEEEEECCCCS
T ss_pred CCCEEEEEEcCcccCCcc--------ceEEEEEEeeccccccceeeecc-----------------cCCceEEEEeccCC
Confidence 578999999864432110 1234788876433 333322111 01245677899999
Q ss_pred CCEEEEEEecCC---C---CCCCceEEEEc
Q 008826 165 NNKYYYQCGDPS---I---PAMSDVYYFRT 188 (552)
Q Consensus 165 ~T~Y~Y~v~~~~---~---~~~S~~~~F~T 188 (552)
+|.|.+||.... . +.||...+|+|
T Consensus 75 ~t~Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 75 APVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp CSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred CeEEEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 999999985331 1 24566777765
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.18 E-value=0.015 Score=44.65 Aligned_cols=80 Identities=21% Similarity=0.235 Sum_probs=47.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..++++-- .++++.|+|..... + ....=.|+|....+...... ... ++..
T Consensus 3 pP~~l~~~~~-~~~sv~l~W~~p~~--~--------~~~~y~v~y~~~~~~~~~~~----~~~-------------~~~~ 54 (91)
T d1fnfa2 3 PPTDLRFTNI-GPDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVAE----LSI-------------SPSD 54 (91)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCTT--C--------CCSEEEEEEEETTCTTCCEE----EEE-------------CTTC
T ss_pred cCCceEEEEe-CCCEEEEEEEecCC--C--------CcceeEEEEEECCCCccEEE----EEe-------------CCCc
Confidence 3777776532 47899999975421 0 11234678876654432211 000 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD 182 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~ 182 (552)
..+.|+||+|+|.|.++|..-...+.|.
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~a~~~~g~S~ 82 (91)
T d1fnfa2 55 NAVVLTNLLPGTEYVVSVSSVYEQHEST 82 (91)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred eEEEEeceeCCCEEEEEEEEEcCCCCCC
Confidence 4678999999999999997544334443
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.16 E-value=0.0025 Score=58.17 Aligned_cols=37 Identities=32% Similarity=0.512 Sum_probs=27.2
Q ss_pred EEEEEeCCCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008826 200 RIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTY 236 (552)
Q Consensus 200 rfavigD~~~~~~~-~~~l~~l~~-~~pDfvl~~GDl~Y 236 (552)
||.++||+|..... .++++++.. ...|.++++||+++
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vD 52 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 79999999976432 345555542 45689999999994
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.15 E-value=0.0057 Score=48.25 Aligned_cols=93 Identities=20% Similarity=0.213 Sum_probs=48.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|++++++-- +++++.|+|.... | + ...-.|+|..................... .++..
T Consensus 6 ~~~~l~v~~~-t~~sv~v~W~pp~---~-------~-~~~y~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 64 (101)
T d2cuia1 6 RLSQLSVTDV-TTSSLRLNWEAPP---G-------A-FDSFLLRFGVPSPSTLEPHPRPLLQRELM---------VPGTR 64 (101)
T ss_dssp CCCCCEEESC-CSSCEEEECCCCT---T-------S-CSEEEEEEECCCCSSSCCCSSCCCCEEEE---------EETTC
T ss_pred CCCCcEEEEE-CCCEEEEEEEecc---c-------c-ccceEEEEEecCCCceeeccCCcceeEee---------cccce
Confidence 4666666543 3789999995432 1 1 13456777765433221100000000000 01123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T 188 (552)
....|+||+|+|.|.++|..-...+.++ .-+++|
T Consensus 65 ~~~~v~~L~p~t~Y~~~V~a~~~~g~g~~~~~~~~T 100 (101)
T d2cuia1 65 HSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTART 100 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEEC
T ss_pred eEEEeCCCCcCCEEEEEEEEEeCCcEeCCeEEEeEE
Confidence 4667899999999999997655333332 334554
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.12 E-value=0.014 Score=45.24 Aligned_cols=85 Identities=15% Similarity=0.226 Sum_probs=49.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.+.--. ++++.|+|.-.... ...-.|.|........... .. .+ ...
T Consensus 6 ~P~~l~v~~v~-~~si~v~W~~p~~~-----------~~~y~i~~~~~~~~~~~~~------~~--~~---------~~~ 56 (93)
T d1tdqa1 6 GPTQILVRDVS-DTVAFVEWTPPRAK-----------VDFILLKYGLVGGEGGKTT------FR--LQ---------PPL 56 (93)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEESSSSCCCEE------EE--EC---------TTC
T ss_pred cCCCCEEEEeC-CCEEEEEEEccccC-----------CCceEEEEEeccCcceeeE------EE--eC---------CCc
Confidence 58888776544 68999999753221 1234677776654322110 00 01 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T 188 (552)
..++|+||+|+|+|.++|..-...+.|+ ...|+|
T Consensus 57 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~~~~~~tT 92 (93)
T d1tdqa1 57 SQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTT 92 (93)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred eEEEEeCcccceEEEEEEEEEeCCCCcCCEEEEEEC
Confidence 3568999999999999997544333332 334554
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.0053 Score=47.31 Aligned_cols=79 Identities=15% Similarity=0.235 Sum_probs=47.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.--. .+++.|+|.-.... ...=.|+|...++.... ... ..+.-.
T Consensus 3 aP~nl~v~~~~-~~s~~l~W~~p~~~-----------i~~Y~i~~~~~~~~~~~--------~~~---------~~~~~~ 53 (89)
T d1fnha3 3 APSNLRFLATT-PNSLLVSWQPPRAR-----------ITGYIIKYEKPGSPPRE--------VVP---------RPRPGV 53 (89)
T ss_dssp CCEEEEEEEEE-TTEEEEEEECCSSC-----------CSEEEEEEECTTSCCEE--------CTT---------CCCTTC
T ss_pred cCcCCEEEEec-CCEEEEEEeCCCcC-----------CceEEEEEeeccCCccE--------EEE---------EcCCCc
Confidence 47777775433 78999999854321 12346777765432210 000 001123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD 182 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~ 182 (552)
..+.|+||+|||.|.++|.+-...+.|+
T Consensus 54 ~~~~~~~L~p~t~Y~~~V~a~n~~g~S~ 81 (89)
T d1fnha3 54 TEATITGLEPGTEYTIYVIALKNNQKSE 81 (89)
T ss_dssp CEEEEESCCTTCEEEEEEEEESSSCEEE
T ss_pred cEEEEEeeeCCCEEEEEEEEEcCCCEeC
Confidence 4678899999999999997655344443
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.007 Score=47.95 Aligned_cols=86 Identities=22% Similarity=0.353 Sum_probs=49.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-. +.++|.|+|..... | + ...=.|+|............ ..+.
T Consensus 13 ~P~~~~~~~~-~~~si~l~W~~p~~--~-------~-i~~Y~i~y~~~~~~~~~~~~-----------------~~~~-- 62 (102)
T d1x5za1 13 QPLNFKAEPE-SETSILLSWTPPRS--D-------T-IANYELVYKDGEHGEEQRIT-----------------IEPG-- 62 (102)
T ss_dssp CCEEEEEECS-SSSEEEEEEECCSC--C-------C-CCEEEECBEESSSCCCBCCE-----------------ECSS--
T ss_pred CCCCeEEEEc-cCCEEEEEEECCCC--C-------C-ccceEEEEEeCCCCceEEEE-----------------cCCc--
Confidence 5788776533 47899999976321 1 0 11234555543322111000 0011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLP 190 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p 190 (552)
....|+||+|+|.|.+||..-+.. .+|+...++|+.
T Consensus 63 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 63 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 245789999999999999654322 466778888864
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.10 E-value=0.022 Score=44.83 Aligned_cols=92 Identities=13% Similarity=0.106 Sum_probs=50.2
Q ss_pred CCCceeEEeec---CCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccc
Q 008826 74 FEPEQLSVSLS---FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (552)
Q Consensus 74 ~~P~qi~l~~~---~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~ 150 (552)
..|..+.+.+. ..++++.|+|.......... +--...=.|+|...+...+......
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~----~~~~l~Y~v~~~~~~~~~~~~~~~~----------------- 62 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKT----GWFTMEYEIRLKPEEAEEWEIHFTG----------------- 62 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTT----TSSCEEEEEEEEESSCSCCEEEEEE-----------------
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCC----CcEEEEEEEEEEeCCCcceeeeccc-----------------
Confidence 35887766543 34678999998753210000 0000112455655554433221100
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCC----CCCCceEEEEc
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSI----PAMSDVYYFRT 188 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~----~~~S~~~~F~T 188 (552)
......|.||+|||.|.+||..... +.||+.-.++|
T Consensus 63 --~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~ 102 (103)
T d1f6fb2 63 --HQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102 (103)
T ss_dssp --TCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred --ceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeEC
Confidence 1135788999999999999864432 24666666655
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.10 E-value=0.027 Score=45.20 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=54.8
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..++++.+ .+++.|+|.......+... +.-....-.|+|...+..-........ ...
T Consensus 7 ~pP~nl~v~~~--~~~~~lsW~~P~~~~~~~~--~~~~~~~y~v~~~~~~~~~~~~~~~~~----------------~~~ 66 (114)
T d2gysa2 7 PEPRDLQISTD--QDHFLLTWSVALGSPQSHW--LSPGDLEFEVVYKRLQDSWEDAAILLS----------------NTS 66 (114)
T ss_dssp CCCEEEEEEEE--TTEEEEEEECCC-----CC--SCGGGEEEEEEEEETTSCSTTCEEEEE----------------SSS
T ss_pred CcCCCeEEEEe--CCEEEEECCCCcccccccc--eeeeEEEEEEEEeccCCceEEEEEeec----------------cCc
Confidence 46999988654 4689999987532111000 000000124566665443222111000 012
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---------CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---------PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---------~~~S~~~~F~T~p~ 191 (552)
.-.+.+.+|.|+|.|.+||.+... +.||+...|+|.|.
T Consensus 67 ~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 67 QATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp EEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred eEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 346788999999999999965311 25788899999864
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.05 E-value=0.022 Score=44.73 Aligned_cols=93 Identities=17% Similarity=0.188 Sum_probs=48.5
Q ss_pred CCCceeEEeecC---CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccc
Q 008826 74 FEPEQLSVSLSF---NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (552)
Q Consensus 74 ~~P~qi~l~~~~---~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~ 150 (552)
..|..+.+.+.. ..+++.|+|.......+.. .--...-.++|....+........
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~----~~~~~~Y~~~~~~~~~~~~~~~~~------------------ 61 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT----GWFTLLYEIRLKPEKAAEWEIHFA------------------ 61 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCTT----SSCCEEEEEEEEETTCSSCEEEEE------------------
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCCC----CcEEEEEeeccccccccceeeecc------------------
Confidence 358888776543 3578999999753211000 000001234444444333221100
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCC----CCCCceEEEEcC
Q 008826 151 SGIIHHVRLTGLEPNNKYYYQCGDPSI----PAMSDVYYFRTL 189 (552)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Y~v~~~~~----~~~S~~~~F~T~ 189 (552)
.....+.|.||+|+|.|.+||.+... +.||+...++|+
T Consensus 62 -~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 62 -GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp -ETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred -ccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 11235778999999999999864321 357888888874
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.013 Score=46.54 Aligned_cols=96 Identities=15% Similarity=0.082 Sum_probs=54.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+... +.+++.|+|......... ++. ..-.|+|............. . .......
T Consensus 10 ~pP~~v~v~~~-~~~si~l~W~~p~~~~~~-----~~i-~~y~v~~~~~~~~~~~~~~~----~---------~~~~~~~ 69 (109)
T d1va9a1 10 GPPMDVTLQPV-TSQSIQVTWKAPKKELQN-----GVI-RGYQIGYRENSPGSNGQYSI----V---------EMKATGD 69 (109)
T ss_dssp SCCEEEEEEEC-SSSEEEEEEECCCSSTTC-----SCC-CEEEEEEEESSTTSCCSCBC----C---------BCCCCSS
T ss_pred CCCcCcEEEEe-cCCEEEEEEcCCCCCCCC-----CcE-EEEEEEEeeccccccceeee----e---------EEecCCC
Confidence 35888877544 488999999874321100 011 12356665544322211000 0 0011234
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~ 189 (552)
..++.|++|+|+|.|.+||..-+. +.+|+.-.|+|+
T Consensus 70 ~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 70 SEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred eeEEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 567889999999999999864432 256777777774
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.011 Score=46.44 Aligned_cols=71 Identities=15% Similarity=0.331 Sum_probs=47.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|.++.|.-.. .+++.|+|...... ....-.|+|....+....... . ..
T Consensus 4 ~~P~nl~v~~~~-~~~v~l~W~~p~~~----------~~~~y~v~y~~~~~~~~~~~~-~------------------~~ 53 (95)
T d2b5ic1 4 WAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQS-V------------------DY 53 (95)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEE-E------------------CS
T ss_pred cCCCCCEEEEEe-CCEEEEEECCCCCc----------eeEEEEEEEEcCCCceeeEee-e------------------cc
Confidence 368888876443 68999999864321 123467888877654433211 1 01
Q ss_pred EEEEEeCCCCCCCEEEEEEec
Q 008826 154 IHHVRLTGLEPNNKYYYQCGD 174 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~ 174 (552)
...++|.+|+|+|.|.+||.+
T Consensus 54 ~~~~~~~~L~p~t~Y~frVRa 74 (95)
T d2b5ic1 54 RHKFSLPSVDGQKRYTFRVRS 74 (95)
T ss_dssp SCEEEECSCCTTSCEEEEEEE
T ss_pred cceeEcCCCCCCCEEEEEEEE
Confidence 136788999999999999975
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.89 E-value=0.011 Score=46.61 Aligned_cols=76 Identities=14% Similarity=0.189 Sum_probs=44.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+..+ .+++.|+|.-.... |. | ...=.|+|................ . -.
T Consensus 8 ~P~~~~v~~~--~~sv~lsW~pp~~~-~~------~-i~~Y~v~~~~~~~~~~~~~~~~~~--~--------------~~ 61 (100)
T d1cfba1 8 APKLTGITCQ--ADKAEIHWEQQGDN-RS------P-ILHYTIQFNTSFTPASWDAAYEKV--P--------------NT 61 (100)
T ss_dssp CCEEEEEEEC--SSEEEEEEECCCCT-TS------C-CCEEEEEEEESSSTTCCEEEEEEE--E--------------TT
T ss_pred cCcCcEEEEc--CCEEEEEEcCCccc-cc------c-eEEEEEEEecCCCCceeeEEeeec--C--------------Cc
Confidence 6888887653 46899999754321 11 1 123467777655443322211110 0 01
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
....+.+|+|+|.|.+||...+
T Consensus 62 ~~~~~~~L~p~t~Y~frV~A~n 83 (100)
T d1cfba1 62 DSSFVVQMSPWANYTFRVIAFN 83 (100)
T ss_dssp CSEEEEECCSSEEEEEEEEEEE
T ss_pred eEEEEecCCCCCEEEEEEEEEe
Confidence 2345679999999999997654
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.0026 Score=52.32 Aligned_cols=38 Identities=29% Similarity=0.236 Sum_probs=30.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~ 192 (552)
.+++|.+|+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T d1uena_ 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCCC
Confidence 478899999999999999754432 57888999998654
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.75 E-value=0.014 Score=44.62 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=45.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.++-- +++++.|+|...... ...-.|+|......... . ... +-.
T Consensus 3 ~P~nl~v~~~-~~~s~~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~-~-----~~~-------------~~~ 51 (86)
T d1tdqa3 3 SPRDLMVTAS-SETSISLIWTKASGP-----------IDHYRITFTPSSGISSE-V-----TVP-------------RDR 51 (86)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCCSC-----------CSEEEEEEECSSSCCEE-E-----EEE-------------SSC
T ss_pred cCCCCEEEEe-cCCEEEEEEeCCCCC-----------ccceEEEEecccccceE-E-----EeC-------------CCc
Confidence 4777777644 478999999874321 12457788765542211 1 000 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
-++.|+||+|||.|.++|..-.
T Consensus 52 ~~~~~~~L~p~t~Y~v~V~a~~ 73 (86)
T d1tdqa3 52 TSYTLTDLEPGAEYIISITAER 73 (86)
T ss_dssp SEEEECCCCTTCCEEEEEEEEE
T ss_pred cEEEECCCccccEEEEEEEEEc
Confidence 3678899999999999997554
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.74 E-value=0.014 Score=45.25 Aligned_cols=85 Identities=21% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.++.++-- +.+++.|+|.-.... ...-.++|........ .. ... ..+..
T Consensus 4 ~P~~l~v~~v-t~~sv~l~W~~p~~~-----------~~~y~i~~~~~~~~~~-------~~-~~~---------~~~~~ 54 (94)
T d1j8ka_ 4 RPKGLAFTDV-DVDSIKIAWESPQGQ-----------VSRYRVTYSSPEDGIH-------EL-FPA---------PDGEE 54 (94)
T ss_dssp CCCCCEEEEE-ETTEEEEECCCCSSC-----------CSCEEEEEEETTTEEE-------EE-CCC---------CCSSC
T ss_pred CCCCCEEEEe-cCCEEEEEEeCCCcc-----------ccceEEEEEeecCCCc-------eE-EEe---------cCCCc
Confidence 4777766432 368999999653221 1234577766543111 00 000 01123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T 188 (552)
....|+||+|+|.|.++|..-...+.|. ...++|
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~~~~~~T 90 (94)
T d1j8ka_ 55 DTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQST 90 (94)
T ss_dssp CEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEEC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCcCCEEEEEEE
Confidence 4677899999999999998765445554 334555
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.74 E-value=0.022 Score=46.07 Aligned_cols=89 Identities=16% Similarity=0.208 Sum_probs=48.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-. +++++.|+|......-| + ...=.|+|............ ... ....
T Consensus 23 ~P~~~~~~~~-~~~sv~v~W~~P~~~~g-------~-i~~Y~i~y~~~~~~~~~~~~---~~~-------------~~~~ 77 (117)
T d1wfoa1 23 PPMGILFPEV-RTTSVRLIWQPPAAPNG-------I-ILAYQITHRLNTTTANTATV---EVL-------------APSA 77 (117)
T ss_dssp CCCCCEEEEE-CSSEEEEECCCCSCCCS-------C-CCEEEEEEEESSCCCSCCCE---EEE-------------CTTC
T ss_pred CCCCcEEEEe-cCCEEEEEEECCCCCCC-------c-eEEEeeeeeeccCCCceEeE---Eec-------------CCce
Confidence 5676665533 47899999975432211 1 12335666554432221100 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC---CCceEEEEc
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPA---MSDVYYFRT 188 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~---~S~~~~F~T 188 (552)
....|++|+|+|.|.+||.+-+..+ +|+...++|
T Consensus 78 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 78 RQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp CEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEEC
Confidence 3566899999999999997654322 444445544
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.65 E-value=0.018 Score=44.39 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=46.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.+++++- -+.++|.|+|.-.... ...=.|+|....+...... . . ..-.
T Consensus 4 pP~~l~v~~-~~~~si~v~W~~p~~~-----------~~~Y~i~~~~~~~~~~~~~-----~----~---------~~~~ 53 (90)
T d1fnha2 4 PPRRARVTD-ATETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----T----I---------KPDV 53 (90)
T ss_dssp CCEEEEEEE-ECSSEEEEEEECCSSC-----------CCCEEEEEEESSSSCCEEE-----E----C---------CTTC
T ss_pred cCCCCEEEE-ecCCEEEEEEECCCCC-----------CceeEEEEEEccCCceEEE-----e----c---------CCCc
Confidence 478877753 3478999999753321 1234677776544322111 0 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
....|+||+|||.|.++|..-...+.|
T Consensus 54 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 80 (90)
T d1fnha2 54 RSYTITGLQPGTDYKIYLYTLNDNARS 80 (90)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTEEC
T ss_pred cEEEeCCCCCCcEEEEEEEEEeCCCCc
Confidence 456789999999999999765433433
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.63 E-value=0.026 Score=45.73 Aligned_cols=39 Identities=15% Similarity=0.252 Sum_probs=29.9
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
.....|+||+|+|.|.+||..-+. +.+|+...|+|++..
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~ 110 (119)
T d1x5ha1 69 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESD 110 (119)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCCC
Confidence 356788999999999999864332 247888999997643
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.57 E-value=0.0081 Score=47.49 Aligned_cols=77 Identities=12% Similarity=0.092 Sum_probs=44.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-. +.+++.|+|......-|..+ ..=.|+|...++..+..+. .. ....
T Consensus 4 ~P~~~~v~~~-~~~sv~l~W~pP~~~~~~~i-------~~Y~V~~~~~~~~~~~~~~----------~~-------~~~~ 58 (98)
T d1x5ya1 4 APQHLTVEDV-TDTTTTLKWRPPDRIGAGGI-------DGYLVEYCLEGSEEWVPAN----------KE-------PVER 58 (98)
T ss_dssp CCEEEEEEEE-CSSEEEEEEECCSCCCSSCC-------CEEEEEEEETTCCCCEESS----------SS-------CBSS
T ss_pred CCcCcEEEEc-cCCEEEEEEECCCcCCCCCc-------eEEEEEEEecCcceeEEee----------ee-------cCce
Confidence 5777766533 46899999985332111111 2235677666544332110 00 0111
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..++|+||+||+.|.|||..-+
T Consensus 59 ~~~~v~~L~~~~~Y~frV~A~n 80 (98)
T d1x5ya1 59 CGFTVKDLPTGARILFRVVGVN 80 (98)
T ss_dssp SEEEEECCCTTCCEEEEEEEEE
T ss_pred eEEEECCCcCCeEEEEEEEEEC
Confidence 3567899999999999998654
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.53 E-value=0.029 Score=43.82 Aligned_cols=80 Identities=11% Similarity=0.064 Sum_probs=39.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..|.+.... .+++.|+|......-+... ....-.|+|....+....... + . . ..+..
T Consensus 4 ~P~~l~v~~~~-~~s~~v~W~~P~~~~~~~~-----~~~~y~v~y~~~~~~~~~~~~-~-----~--~-------~~~~~ 62 (101)
T d1iarb2 4 APGNLTVHTNV-SDTLLLTWSNPYPPDNYLY-----NHLTYAVNIWSENDPADFRIY-N-----V--T-------YLEPS 62 (101)
T ss_dssp CCEEEEEC-----CCEEEEEECSSCTTSTTG-----GGCEEEEEEEESSSCSCEEEE-E-----E--C-------SSCCE
T ss_pred cCCcCEEEEEe-CCeEEEEEccccCCCCccc-----eeeEEEEeeecccceeeeeee-e-----e--c-------cCccc
Confidence 58887775443 6799999997543211000 001135677666554432211 0 0 0 01234
Q ss_pred EEEEeCCCCCCCEEEEEEecC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDP 175 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~ 175 (552)
..+.|.+|+|+|.|.+||.+.
T Consensus 63 ~~~~i~~L~p~t~Y~~rVrA~ 83 (101)
T d1iarb2 63 LRIAASTLKSGISYRARVRAW 83 (101)
T ss_dssp EEECC-----CCCEEEEEEEE
T ss_pred eEEEECCCCCCCEEEEEEEEE
Confidence 567899999999999999644
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.52 E-value=0.03 Score=45.50 Aligned_cols=38 Identities=29% Similarity=0.317 Sum_probs=29.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPASG 193 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~~ 193 (552)
..+|++|+|+|.|.+||...+.. .+|+...++|.+...
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~p 116 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESG 116 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCCc
Confidence 45689999999999999765432 467888999876543
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.51 E-value=0.015 Score=46.85 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=54.1
Q ss_pred CCceeEEeecC-CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~~-~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+.+.... .+++|.|+|.-....-|. ...=.|+|....+...... . .....+.
T Consensus 7 pP~~~~v~~~~~~~~si~v~W~~p~~~~~~--------~~~Y~v~y~~~~~~~~~~~-------~--------~~~~~~~ 63 (115)
T d1bqua2 7 PPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQI-------P--------PEDTAST 63 (115)
T ss_dssp CCEEEEEECC--CCSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEEC-------C--------GGGGCSC
T ss_pred CCCCCEEEEeccCCCEEEEEEeeccccccc--------eeeeeeeeeeeeeeeeecc-------c--------ccccccc
Confidence 57888777544 568899999754322110 0123566665544332110 0 0011223
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC------CCCCceEEEEcCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI------PAMSDVYYFRTLPA 191 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~------~~~S~~~~F~T~p~ 191 (552)
..++.|++|+|++.|.+||...+. ..||....++|...
T Consensus 64 ~~~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~~ 107 (115)
T d1bqua2 64 RSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 107 (115)
T ss_dssp CSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred ccEEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCCC
Confidence 457889999999999999953221 14567888888543
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.51 E-value=0.019 Score=45.94 Aligned_cols=92 Identities=13% Similarity=0.075 Sum_probs=53.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.++. .++++.|+|.-....-| + ...=.|+|....... ...... . +...
T Consensus 10 PP~~~~~~~--t~~si~l~W~pp~~~~~-------~-i~~Y~v~~~~~~~~~-~~~~~~-------~---------~~~~ 62 (108)
T d1v5ja_ 10 PPRGLVAVR--TPRGVLLHWDPPELVPK-------R-LDGYVLEGRQGSQGW-EVLDPA-------V---------AGTE 62 (108)
T ss_dssp CCEEEEEEE--CSSSEEEEEECCSCCSS-------C-CCBEEEEEEETTCCC-EEEEEE-------E---------CSSC
T ss_pred cCCCeEEEE--cCCEEEEEEEecccCCC-------c-eeEEEEEeeeeeeee-eecccc-------c---------ccee
Confidence 477776544 46789999985432211 1 123467777654322 111100 0 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPASG 193 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~~ 193 (552)
+.+.|.+|+|+|.|.|||..-+.. .+|+...++|....+
T Consensus 63 ~~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~~~ 104 (108)
T d1v5ja_ 63 TELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104 (108)
T ss_dssp CEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCSS
T ss_pred eeEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCCCC
Confidence 577889999999999999754432 455666677755433
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.50 E-value=0.049 Score=43.15 Aligned_cols=90 Identities=14% Similarity=0.060 Sum_probs=49.9
Q ss_pred CCceeEEeec-CCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 75 EPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 75 ~P~qi~l~~~-~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
.|..+.+... ..++++.|+|.......... . -...-.++|...++..+.... ...
T Consensus 10 PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~----~-~~~~y~~~~~~~~~~~~~~~~-------------------~~~ 65 (109)
T d1uc6a_ 10 PPENVVARPVPSNPRRLEVTWQTPSTWPDPE----S-FPLKFFLRYRPLILDQWQHVE-------------------LSN 65 (109)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCTT----T-TTBCEEEEEEESSSCCCCCEE-------------------ESS
T ss_pred CCCCCEEEEEecCCCEEEEEEeCCcccCCCC----e-eEEEEEEEEeecCCCceEEec-------------------cCC
Confidence 5888888754 45789999999753210000 0 001234555554433322111 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC--C---CCCceEEEEc
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI--P---AMSDVYYFRT 188 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~--~---~~S~~~~F~T 188 (552)
...+.|.+|+|+|.|.+||...+. . .||.....+|
T Consensus 66 ~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 66 GTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp CSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred ceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 235678999999999999975321 1 4455555544
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.46 E-value=0.01 Score=47.69 Aligned_cols=22 Identities=23% Similarity=0.440 Sum_probs=18.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..+.|+||+|+|+|.|||.+-+
T Consensus 69 ~~~~i~~L~p~t~Y~frV~A~N 90 (108)
T d1wf5a1 69 TSVTVKGLVPARSYQFRLCAVN 90 (108)
T ss_dssp CEEEEESCCTTCEEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEc
Confidence 3567899999999999997654
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.35 E-value=0.024 Score=44.89 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=25.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~ 189 (552)
...+.+|+|+|.|.+||.+-+. +.+|+...|+|.
T Consensus 67 ~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 67 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 4567899999999999863322 357788888874
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.30 E-value=0.01 Score=47.30 Aligned_cols=34 Identities=21% Similarity=0.078 Sum_probs=24.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~ 189 (552)
...++||+|||+|.+||.+.+. +.+|+...++|+
T Consensus 69 ~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 69 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 4578999999999999975432 246666666663
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.27 E-value=0.01 Score=46.81 Aligned_cols=86 Identities=14% Similarity=0.136 Sum_probs=45.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.... .+++.|+|.-....-|. . ..=.|+|................ .. . ..-.
T Consensus 5 ~P~~~~~~~~~-~~sv~v~W~~P~~~~g~-------i-~~Y~i~~~~~~~~~~~~~~~~~~--~~-~---------~~~~ 63 (103)
T d1qg3a2 5 EPGRLAFNVVS-STVTQLSWAEPAETNGE-------I-TAYEVCYGLVNDDNRPIGPMKKV--LV-D---------NPKN 63 (103)
T ss_dssp CCCCCEEEEEE-TTEEEEECCCCSCCSSC-------C-CEEEEEEEEBCTTSCBCSCCEEE--EE-C---------CTTC
T ss_pred cCCCcEEEEec-CCEEEEEEEECccCCCC-------c-eEEEEEeeccccccccccceEEE--Ee-c---------CCCc
Confidence 56777665543 78999999864332111 0 12345555443322110000000 00 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
..+.|.||+|++.|.+||.+-+..+++
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g 90 (103)
T d1qg3a2 64 RMLLIENLRESQPYRYTVKARNGAGWG 90 (103)
T ss_dssp CEEEECCCCTTCCEEEEEEEEETTEEC
T ss_pred eEEEEeecCCCCEEEEEEEEEcCCccC
Confidence 467899999999999999755433443
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.25 E-value=0.015 Score=45.90 Aligned_cols=22 Identities=14% Similarity=0.357 Sum_probs=18.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
....++||+|+|+|.|||.+-+
T Consensus 60 ~~~~i~~L~p~t~Y~frV~A~n 81 (104)
T d1bpva_ 60 NEFTVSGLTEDAAYEFRVIAKN 81 (104)
T ss_dssp SEEEECSCCSSCCEEEEEEEEC
T ss_pred eEEEEcCCCCCCEEEEEEEEEE
Confidence 4567899999999999998754
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=95.21 E-value=0.11 Score=48.79 Aligned_cols=189 Identities=16% Similarity=0.174 Sum_probs=101.7
Q ss_pred ceEEEEEeCCCCCCCh---HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCCCcCCCCCCccccccHHHHHHHHHH
Q 008826 198 PKRIAIVGDLGLTYNT---TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (552)
Q Consensus 198 ~~rfavigD~~~~~~~---~~~l~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~cy~~~~~~~~~~e~y~~~wd~~~~~ 273 (552)
.+||+++||.=....- .+.+..+. +.++||||..|-++- .|.+.- + +.+.++
T Consensus 4 ~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa------~G~Git---------------~---k~~~eL 59 (281)
T d1t71a_ 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTT------HGKGLS---------------L---KHYEFL 59 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTT------TTSSCC---------------H---HHHHHH
T ss_pred cceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCC------CCcCCC---------------H---HHHHHH
Confidence 5899999997432111 12233444 358999999999983 333210 1 112222
Q ss_pred HHHhhhcCCeEEecCCchhcccccCcchHHhhh---hcCCCCCC-----CCCCCcceEEEEcCeEEEEEeccc--ccC--
Q 008826 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEE-----SGSLSSFYYSFNAGGIHFIMLGAY--ISY-- 341 (552)
Q Consensus 274 l~~l~~~iP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~-----~~~~~~~yYsf~~G~v~fI~Ldt~--~~~-- 341 (552)
+ ...+- +.+.|||=+.. +....|.. +.-.|.+- .+..+..|..++..+-++.+++-. ...
T Consensus 60 ~---~~GvD-vIT~GNH~wd~----kei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~ 131 (281)
T d1t71a_ 60 K---EAGVN-YITMGNHTWFQ----KLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLP 131 (281)
T ss_dssp H---HHTCC-EEECCTTTTCC----GGGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCS
T ss_pred H---HhCCc-EEEcCchhhhc----hhhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeecccccccc
Confidence 2 23454 46789998752 22222322 22223331 123456688888876666665532 111
Q ss_pred CCcHHHHHHHHHHHhcccCCCCCEEEEEcCCCcccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccc
Q 008826 342 DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNY 421 (552)
Q Consensus 342 ~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~pv~n~ 421 (552)
........-+++.+.+ .+++.+||=+|.=. .....+| -.+.+-+|.+|+-=|+|. |..+.
T Consensus 132 ~~~~~pf~~~~~~~~~---~~~d~i~VDfHaEA-----------TSEK~A~-g~~lDGrvsaVvGTHTHV-----~TaD~ 191 (281)
T d1t71a_ 132 FKTTNPFKVLKELILK---RDCDLHIVDFHAET-----------TSEKNAF-CMAFDGYVTTIFGTHTHV-----PSADL 191 (281)
T ss_dssp SCBCCHHHHHHHHHTT---CCCSEEEEEEECSC-----------HHHHHHH-HHHHTTTSSEEEEESSSS-----CCTTC
T ss_pred ccccHHHHHHHHhhcc---cCCCeEEEEeccch-----------hhhhhhh-eeeeCCcEEEEEecCccc-----ccCcc
Confidence 1112223334444443 45667888888422 1112233 334456899999999995 22233
Q ss_pred ccCCCCcEEEEE-CCCCC
Q 008826 422 TLDPCGPVHITI-GDGGN 438 (552)
Q Consensus 422 ~~~~~G~vyiv~-G~gG~ 438 (552)
.+-|+|+-|++- |.-|.
T Consensus 192 rILp~GTAyiTDvGMtG~ 209 (281)
T d1t71a_ 192 RITPKGSAYITDVGMCGP 209 (281)
T ss_dssp EECTTSCEEESCCCEEBC
T ss_pred ccccCCeEEEecCccccC
Confidence 334789999973 55553
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.21 E-value=0.059 Score=42.70 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=23.1
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
+.-...+|+||+|+|+|.+||.+-+..+.|
T Consensus 65 ~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s 94 (107)
T d2ic2a1 65 GKSFTASVTDLKPQHTYRFRILAVYSNNDN 94 (107)
T ss_dssp EEEEEEEECSCCSSEEEEEEEEEEETTSCE
T ss_pred cceeEEEECCCcCCcEEEEEEEEEcCCCCC
Confidence 345678999999999999999866533443
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.18 E-value=0.033 Score=44.27 Aligned_cols=82 Identities=13% Similarity=0.092 Sum_probs=45.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-. ..+++.|+|.-.... |.. ...-.|+|................... ....
T Consensus 13 ~P~~~~~~~~-~~~sv~l~W~pp~~~-~~~-------i~~y~v~~~~~~~~~~~~~~~~~~~~~------------~~~~ 71 (111)
T d1wisa1 13 PPTNLGISNI-GPRSVTLQFRPGYDG-KTS-------ISRWLVEAQVGVVGEGEEWLLIHQLSN------------EPDA 71 (111)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCCCC-SSC-------CSEEEEEECBSCCSTTSCCEEEEEEES------------CTTC
T ss_pred CCCCCEEEEc-CCCEEEEEEeCCCCC-CCc-------eeEEEEeeeecccCCCcceeeeeeeec------------ccce
Confidence 5788776533 478999999753321 111 123456776654433221111100000 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI 177 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~ 177 (552)
....|.||+|++.|.+||.+.+.
T Consensus 72 ~~~~v~~L~p~t~Y~frV~A~N~ 94 (111)
T d1wisa1 72 RSMEVPDLNPFTCYSFRMRQVNI 94 (111)
T ss_dssp SEEEECSCCTTSEECCCCEEECS
T ss_pred eEEEeCCCCCCCEEEEEEEEEcC
Confidence 34668999999999999976553
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.16 E-value=0.026 Score=44.78 Aligned_cols=82 Identities=10% Similarity=0.090 Sum_probs=45.6
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCcccccc
Q 008826 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (552)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 151 (552)
+...|..|.+... +.++|.|+|.-....... ++. ..=.|+|........... ... ..
T Consensus 4 P~~~P~~v~~~~~-~~~si~v~W~p~~~~~~n-----g~i-~~Y~I~y~~~~~~~~~~~---~~~-------------~~ 60 (105)
T d1cfba2 4 PFKNPDNVVGQGT-EPNNLVISWTPMPEIEHN-----APN-FHYYVSWKRDIPAAAWEN---NNI-------------FD 60 (105)
T ss_dssp CSCCCSCCEEECS-STTCEEEECCCCCGGGTC-----SSS-CEEEEEEEESSTTCCCEE---EEE-------------CC
T ss_pred CCCCCcCeEEEEc-cCCeEEEEEeCCChhhcC-----ceE-EEEEEEeeeeccccceeE---EEe-------------cC
Confidence 3346888876543 478999999642211000 010 233566765543322110 000 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCC
Q 008826 152 GIIHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
.....+.|.+|+|+|.|.+||..-+
T Consensus 61 ~~~~~~~i~~L~p~t~Y~~~V~A~N 85 (105)
T d1cfba2 61 WRQNNIVIADQPTFVKYLIKVVAIN 85 (105)
T ss_dssp TTCCEEEECSCCSSCEEEEEEEEEE
T ss_pred CCccEEEECCCCCCCEEEEEEEEEe
Confidence 1234678899999999999997654
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.06 E-value=0.045 Score=44.70 Aligned_cols=92 Identities=12% Similarity=0.128 Sum_probs=50.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|.+|.+..- +.+++.|+|.-....-+ . ...-.++|................ ...
T Consensus 19 ~P~~~~v~~~-~~~sv~l~W~~p~~~~~-~-------i~~~~~~~~~~~~~~~~~~~~~~~----------------~~~ 73 (127)
T d1ueya_ 19 PPFDLELTDQ-LDKSVQLSWTPGDDNNS-P-------ITKFIIEYEDAMHKPGLWHHQTEV----------------SGT 73 (127)
T ss_dssp CCEEEEEECC-SSSCEEEEEECCCCCSS-C-------EEEEEEEEEBTTTCTTCEEEEEEE----------------ESS
T ss_pred CCCCcEEEEe-cCCeEEEEEeCCccccc-c-------eEeeeeeeccccccceeEEEEeec----------------CCc
Confidence 5888776543 36899999975432211 0 123455665544333321111110 012
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CCCce-EEEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDV-YYFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~-~~F~T~p~ 191 (552)
+...|.+|+|++.|.+||..-+.. .+|+. ..|+|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 74 QTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 345678999999999998654432 34433 45667654
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.03 E-value=0.028 Score=45.24 Aligned_cols=88 Identities=17% Similarity=0.114 Sum_probs=51.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+++..+ .+++.|+|.-....-| . ...=.|+|+...... .. ... ++..
T Consensus 23 ~P~~~~~~~~--~~si~v~W~~p~~~~g-~-------i~~Y~i~~~~~~~~~-~~-----~~~-------------~~~~ 73 (113)
T d1x5ia1 23 VPSSLHVRPL--VTSIVVSWTPPENQNI-V-------VRGYAIGYGIGSPHA-QT-----IKV-------------DYKQ 73 (113)
T ss_dssp SCSEEEEEEE--TTEEEEEEECCSCTTB-C-------CCEEEEEECSSCGGG-EE-----EEC-------------CTTC
T ss_pred CCEeeeeeeC--CCEEEEEEEccccCCc-c-------EEEEEEEeeeccccc-ee-----eee-------------eCCc
Confidence 5777777643 4789999985432211 0 122356776554321 11 110 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCCc--eEEEEcCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPA 191 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S~--~~~F~T~p~ 191 (552)
....|.+|+|++.|.+||..-+..+.|. .-.++|.|.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 74 RYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp CEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred cEEEEeccccCcEEEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 4667999999999999997665444543 345777664
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.76 E-value=0.043 Score=45.58 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=29.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~ 192 (552)
..++|+||+|+|.|.+||...+. ..+|+...|+|++.+
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~ 122 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCCC
Confidence 35789999999999999865432 257888899997643
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.62 E-value=0.042 Score=42.41 Aligned_cols=79 Identities=15% Similarity=0.097 Sum_probs=43.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|..+.+.-- +.+++.|+|..... +....=.|+|........... ... +...
T Consensus 8 ~P~~l~v~~~-t~~si~l~W~~p~~----------~~i~~Y~v~~~~~~~~~~~~~--------~~~---------~~~~ 59 (95)
T d2fnba_ 8 QLTDLSFVDI-TDSSIGLRWTPLNS----------STIIGYRITVVAAGEGIPIFE--------DFV---------DSSV 59 (95)
T ss_dssp CCTTCEEECC-CSSCEEEECCCCCC----------SSCCEEEEEEEEETSCCEEEE--------EEC---------CSSC
T ss_pred cCCCeEEEEE-cCCEEEEEEEecCC----------ceEEeEEEEEEEeeccceEEE--------EEe---------CCCC
Confidence 3666666433 36899999965321 111233566655443221110 000 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~~~~~S 181 (552)
..+.|+||+|||.|.++|..-...+.|
T Consensus 60 t~~~i~~L~p~t~Y~~~V~a~~~~g~s 86 (95)
T d2fnba_ 60 GYYTVTGLEPGIDYDISVITLINGGES 86 (95)
T ss_dssp SEEEECCCCTTSEEEEEEEEEETTEEC
T ss_pred eEEEEecccCCEEEEEEEEEEeCCcEe
Confidence 367889999999999999755433333
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.58 E-value=0.11 Score=39.80 Aligned_cols=74 Identities=14% Similarity=0.272 Sum_probs=42.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeE
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 154 (552)
.|. +.++- ...+++.|+|.-....-| . ...=.|+|............ +. ...
T Consensus 3 ~P~-~~~~~-~~~~sv~l~W~pP~~~~g-~-------i~~Y~i~~~~~~~~~~~~~~-----~~-------------~~~ 54 (94)
T d2dn7a1 3 RPT-MMIST-TAMNTALLQWHPPKELPG-E-------LLGYRLQYCRADEARPNTID-----FG-------------KDD 54 (94)
T ss_dssp CCE-EEEEE-CSTTEEEEEEECCSSCSS-C-------CCEEEEEEEETTCSSCEEEE-----EE-------------TTC
T ss_pred CCc-EeEEE-EeCCEEEEEEeCCCCCCC-c-------eEEEEEEEEEcCCCCcEEEE-----cC-------------CCc
Confidence 464 33332 346899999986432211 1 12345777766544332211 11 012
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
....|++|+|+|.|.+||..-+
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~A~n 76 (94)
T d2dn7a1 55 QHFTVTGLHKGTTYIFRLAAKN 76 (94)
T ss_dssp CEEEEECCCTTCEEEEEEEEEE
T ss_pred cEEEEEccCCeeEEEEEEEEEc
Confidence 3456899999999999997554
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.51 E-value=0.046 Score=43.05 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=46.5
Q ss_pred CCCceeEEeec-CCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 74 FEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 74 ~~P~qi~l~~~-~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
..|..+.++.- ..++++.|+|.......+. .....-.|+|.......+.... . .+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~------~~~~~y~v~~~~~~~~~~~~~~-----~-------------~~ 58 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSS------FYRLRFELRYRAERSKTFTTWM-----V-------------KD 58 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCS------SSCEEEEEEEEETTCSCCEEEE-----C-------------GG
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCC------ceeEEEEEEEeeCCCCceeeec-----c-------------cc
Confidence 35888877664 4578999999964321000 0112345677766544332211 0 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDP 175 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~ 175 (552)
......|.+|+|+|.|.+||...
T Consensus 59 ~~~~~~i~~L~p~t~Y~~rVra~ 81 (104)
T d1n26a3 59 LQHHCVIHDAWSGLRHVVQLRAQ 81 (104)
T ss_dssp GCSEEEESSCCTTCCEEEEEEEE
T ss_pred ceEEEEECCCCCCCEEEEEEEEE
Confidence 12356789999999999999643
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.29 E-value=0.053 Score=44.29 Aligned_cols=41 Identities=22% Similarity=0.125 Sum_probs=30.9
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCCCCCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGP 194 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p~~~~ 194 (552)
....+|.||+|+|.|.+||..-.. ...|+...++|++..++
T Consensus 74 ~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~~~~~~T~e~~~P 117 (120)
T d1ujta_ 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGP 117 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSCCC
T ss_pred eeEEEECCCCCCCEEEEEEEEEeCCcCcCCCCCEEEEeCCCCcC
Confidence 346778999999999999864432 25678889999886443
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.26 E-value=0.092 Score=41.38 Aligned_cols=84 Identities=12% Similarity=0.048 Sum_probs=46.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..|........++|+++|.-+... |. | ..-.+.|............-...... .....
T Consensus 6 ~~P~~v~~i~~~~~~sv~~sW~p~~d~-~~------~--~~y~~~y~~~~~~~~~~~~~~~~~~~----------~~~~~ 66 (107)
T d1cd9b1 6 ASPSNLSCLMHLTTNSLVCQWEPGPET-HL------P--TSFILKSFRSRADCQYQGDTIPDCVA----------KKRQN 66 (107)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCC-SS------C--CEEEEEEEECCGGGCSCCCEEEEEEC----------CTTCC
T ss_pred CCCcCCEEEEecCCCEEEEEEcCCCCC-CC------C--cceeEEEEEeecccceeeeeeeeecc----------ccCcc
Confidence 367777632234578999999765321 10 1 23455665544322211111110000 01123
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
.-.+.+++|+|++.|++||.+.+
T Consensus 67 ~~~~~~~~L~~~t~Y~frV~A~N 89 (107)
T d1cd9b1 67 NCSIPRKNLLLYQYMAIWVQAEN 89 (107)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEE
T ss_pred ccEEEcCCCCcCceEEEEEEEEe
Confidence 56788999999999999998665
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.03 E-value=0.041 Score=44.86 Aligned_cols=106 Identities=13% Similarity=0.176 Sum_probs=56.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEE--EEEEEEeeeecccCCccccccC
Q 008826 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEA--TGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 75 ~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a--~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
.|..|.++. ..+++.|+|.-....-| .+ ..=.|+|........... ......+... .......+
T Consensus 10 aP~~v~v~~--~~~si~l~W~~P~~~~g-~i-------~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 75 (123)
T d1wfta_ 10 APSTVRISK--NVDGIHLSWEPPTSPSG-NI-------LEYSAYLAIRTAQMQDNPSQLVFMRIYCGL----KTSCTVTA 75 (123)
T ss_dssp CCEEEEEEE--CSSEEEEEEECCSSCCS-SC-------CCEEEEEEECSSCCCSCSCCCEEEEEEEES----CSEEEEEH
T ss_pred CCcccEEEe--CCCEEEEEecCchhcCC-ce-------EEEEEEEEECCCCCccccceeeeEEEecCC----ceeEeecC
Confidence 688888764 46899999986443222 11 244677766544322110 0001111100 00000000
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEcCCCCCC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPASGP 194 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T~p~~~~ 194 (552)
..-...|.+|+|+|.|.+||.+.+.. .+|++..|+|....++
T Consensus 76 ~~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~~P 120 (123)
T d1wfta_ 76 GQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSGP 120 (123)
T ss_dssp HHHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCSSC
T ss_pred CccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCCCC
Confidence 01123578999999999999866543 4567788888765443
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.65 E-value=0.087 Score=40.24 Aligned_cols=63 Identities=17% Similarity=0.282 Sum_probs=38.0
Q ss_pred CCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEEEEEeCCCCCC
Q 008826 86 NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPN 165 (552)
Q Consensus 86 ~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~ 165 (552)
+++++.|+|..... + ...-.|+|....+...... ... ++-...+.|+||+||
T Consensus 9 t~~sv~l~W~~p~~----------~-~~~Y~v~~~~~~~~~~~~~----~~~-------------~~~~t~~~l~~L~p~ 60 (91)
T d1fnaa_ 9 TPTSLLISWDAPAV----------T-VRYYRITYGETGGNSPVQE----FTV-------------PGSKSTATISGLKPG 60 (91)
T ss_dssp CSSCEEEECCCCSS----------C-CSEEEEEEEETTCCSCCEE----EEE-------------ETTCCEEEECSCCTT
T ss_pred CCCEEEEEEEccce----------E-ecEEEEEEEcCCCCceeEE----EEe-------------CCCccEEEeCCCCCC
Confidence 47899999964321 1 1345677877654332211 000 011236789999999
Q ss_pred CEEEEEEecCC
Q 008826 166 NKYYYQCGDPS 176 (552)
Q Consensus 166 T~Y~Y~v~~~~ 176 (552)
|.|.++|..-.
T Consensus 61 t~Y~~~V~a~~ 71 (91)
T d1fnaa_ 61 VDYTITVYAVT 71 (91)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEEEEEe
Confidence 99999997543
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.45 E-value=0.092 Score=41.30 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
....|+||+|+|.|.+||..-+
T Consensus 67 ~~~~i~~L~p~t~Y~~~V~A~n 88 (106)
T d1wfna1 67 LEYRVTGLTALTTYTIEVAAMT 88 (106)
T ss_dssp CEEEEESCCTTCEEEEEEEEEC
T ss_pred eEEEEccCCCCCEEEEEEEEEC
Confidence 4677899999999999997554
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.41 E-value=0.053 Score=43.07 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=25.2
Q ss_pred EEEEeCCCCCCCEEEEEEecC--CC---CCCCceEEEEcC
Q 008826 155 HHVRLTGLEPNNKYYYQCGDP--SI---PAMSDVYYFRTL 189 (552)
Q Consensus 155 h~v~l~gL~P~T~Y~Y~v~~~--~~---~~~S~~~~F~T~ 189 (552)
..+.|++|+|+|.|.+||.+. +. +.||+...++|+
T Consensus 65 ~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 65 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 367789999999999999542 21 356667666653
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.18 E-value=0.064 Score=43.27 Aligned_cols=21 Identities=24% Similarity=0.447 Sum_probs=17.7
Q ss_pred EEEeCCCCCCCEEEEEEecCC
Q 008826 156 HVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 156 ~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
..+|+||+|+|.|.+||..-+
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N 93 (117)
T d1uema_ 73 LYTVRGLRPNTIYLFMVRAIN 93 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEE
T ss_pred cceECCCCCCCEEEEEEEEEe
Confidence 456899999999999997654
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.54 E-value=0.11 Score=40.39 Aligned_cols=71 Identities=20% Similarity=0.323 Sum_probs=36.8
Q ss_pred eeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCeEEEE
Q 008826 78 QLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHV 157 (552)
Q Consensus 78 qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v 157 (552)
.|.+ ..+.+++.|+|.......|. ....=.|+|....+.-..... .. . .-...+
T Consensus 10 ~l~v--~~~~~s~~l~W~~P~~~~~~-------~~~~Y~v~y~~~~~~~~~~~~-~~-~---------------~~~~~~ 63 (100)
T d2gysa4 10 SLQV--TKDGDSYSLRWETMKMRYEH-------IDHTFEIQYRKDTATWKDSKT-ET-L---------------QNAHSM 63 (100)
T ss_dssp EEEE--C---CCCEEEEEC---------------CEEEEEEEECSSSCSTTSCE-EE-E---------------ESCSEE
T ss_pred ccEE--EECCCEEEEEEecCcccCCc-------cceEEEEEEeecccceeceee-cc-c---------------CCceEE
Confidence 4554 44557899999875432221 011346777765443211100 00 0 012467
Q ss_pred EeCCCCCCCEEEEEEec
Q 008826 158 RLTGLEPNNKYYYQCGD 174 (552)
Q Consensus 158 ~l~gL~P~T~Y~Y~v~~ 174 (552)
.|.+|+|++.|.+||..
T Consensus 64 ~l~~L~p~t~Y~~rVRa 80 (100)
T d2gysa4 64 ALPALEPSTRYWARVRV 80 (100)
T ss_dssp ECCCCCSSCCCEEEEEE
T ss_pred EeCCCCCCCeEEEEEEE
Confidence 89999999999999964
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.43 E-value=0.057 Score=43.75 Aligned_cols=93 Identities=15% Similarity=0.127 Sum_probs=52.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..|.+.....+++|.|+|.-.... +. +......++.|....+.... .. . . ....-
T Consensus 12 ~pP~~v~v~~~~s~~si~vsW~PP~~~-~~-----~~~~~~~i~~Y~v~~~~~~~---~~--~-~----------~~~~~ 69 (117)
T d2cspa1 12 APPQDVTVQAGVTPATIRVSWRPPVLT-PT-----GLSNGANVTGYGVYAKGQRV---AE--V-I----------FPTAD 69 (117)
T ss_dssp CCCEEEEECCCSSTTEEEEEEECCCCC-TT-----SCSSSSCEEEEEEESSSSEE---EE--E-C----------CTTCS
T ss_pred CCCCccEEEEecCCCEEEEEEcCCCcc-cc-----CcccccceEEEEEEeecccc---ee--e-e----------eeccc
Confidence 358888776655678999999753211 00 00112346777654322111 00 0 0 01123
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CCCceEEEEc
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRT 188 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~---~~S~~~~F~T 188 (552)
...+.|+||+|+|.|.+||..-+.. ..|..-.++|
T Consensus 70 ~~~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 70 STAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp EEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred eeeeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 4567899999999999998644322 3555555555
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.20 E-value=0.53 Score=45.08 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHV 409 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~ 409 (552)
.++++.+++++++++++=||.
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He 253 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHE 253 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCS
T ss_pred HHHHHHHHHHcCCcEEEEcCc
Confidence 368889999999999999996
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.13 E-value=1.1 Score=35.35 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=22.3
Q ss_pred EeCCCCCCCEEEEEEecCCC---CCCCceEEEEcCC
Q 008826 158 RLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (552)
Q Consensus 158 ~l~gL~P~T~Y~Y~v~~~~~---~~~S~~~~F~T~p 190 (552)
.+.+|+|+|.|.+||..-+. ..+|+...+.+..
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~~ 110 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEeccC
Confidence 34589999999999974322 2567666664443
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.98 E-value=0.31 Score=41.01 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=27.4
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC------CCCceEEEEcCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPSIP------AMSDVYYFRTLP 190 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~~~------~~S~~~~F~T~p 190 (552)
....+|+||+|+|.|.++|.+-+.. ..+..-.|||+|
T Consensus 154 ~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 154 KESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp CSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred eEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 3468899999999999999643211 245677888876
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.75 E-value=0.68 Score=43.56 Aligned_cols=22 Identities=18% Similarity=0.160 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHVH 410 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H 410 (552)
.+++++.++++++++++=||.=
T Consensus 217 ~~~~~~Fl~~n~l~~IIR~He~ 238 (288)
T d3c5wc1 217 QDISETFNHANGLTLVSRAHQL 238 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHHHHCCCcEEEcCCCc
Confidence 3578889999999999999873
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.52 E-value=0.8 Score=34.76 Aligned_cols=76 Identities=7% Similarity=-0.090 Sum_probs=43.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcCCCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccCe
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 153 (552)
..|..+.+.-. +.++|.++|.-.... |. + ..-.|+|....+..... . ....+ -
T Consensus 5 ~~P~n~~~~~~-~~~si~~~W~p~~~~-~~------~--~~y~v~~~~~~~~~~~~--------~--~~~~~-------~ 57 (95)
T d1bqua1 5 EKPKNLSCIVN-EGKKMRCEWDGGRET-HL------E--TNFTLKSEWATHKFADC--------K--AKRDT-------P 57 (95)
T ss_dssp CCCEEEEEEEE-TTSCCEEEEECCSCC-SS------C--CEEEEEEEETTEECCCE--------E--CCSSC-------T
T ss_pred CCCeeeEEEEc-cCCEEEEEEeCcccC-CC------c--eEEEEEEEEcccceeEe--------e--ccccc-------c
Confidence 36788877644 468899999875431 11 1 23456665543221110 0 00111 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008826 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (552)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Y~v~~~~ 176 (552)
.-...+.+|+|++.|++||.+.+
T Consensus 58 ~~~~~~~~L~~~~~Y~f~V~A~N 80 (95)
T d1bqua1 58 TSCTVDYSTVYFVNIEVWVEAEN 80 (95)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEE
T ss_pred eeeeeeeecCCCcEEEEEEEEEe
Confidence 12345679999999999998665
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=84.18 E-value=0.73 Score=43.48 Aligned_cols=22 Identities=14% Similarity=0.206 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008826 389 RVEMEALLYSYGVDIVFNGHVH 410 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H 410 (552)
.+++++.+++++.++++=||.-
T Consensus 224 ~~~~~~Fl~~n~l~~IIR~He~ 245 (294)
T d1jk7a_ 224 AEVVAKFLHKHDLDLICRAHQV 245 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHHHHCCCCEEEEcCcc
Confidence 3678899999999999999974
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.88 E-value=0.52 Score=36.13 Aligned_cols=75 Identities=7% Similarity=-0.024 Sum_probs=37.9
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCcCcC-CCCCCCCCCCccEEEEecCCCCCceEEEEEEEEeeeecccCCccccccC
Q 008826 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGD-NIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (552)
Q Consensus 74 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~g~-~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 152 (552)
..|+.|.+....+++.+.|+|......... ... .-.=.|+|...++.........
T Consensus 3 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~-----~L~Yev~y~~~~~~~~~~~~~~------------------- 58 (94)
T d3d85d3 3 DPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYF-----SLTFCVQVQGKSKREKKDRVFT------------------- 58 (94)
T ss_dssp CCCEEEEEEEC----CEEEEEECCTTSCSCTTTS-----CEEEEEEEECC------CEEEE-------------------
T ss_pred CCCcccEEEEecCCCeEEEEecCCCCcCCCCCeE-----EEEEEEEEEECCCCccEEeccc-------------------
Confidence 358999888766677899999886432110 000 0123677766554333221110
Q ss_pred eEEEEEeCCCCCCCEEEEEEecC
Q 008826 153 IIHHVRLTGLEPNNKYYYQCGDP 175 (552)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Y~v~~~ 175 (552)
..++..|.|++.|.+||...
T Consensus 59 ---~~t~~~L~p~~~Y~v~VRa~ 78 (94)
T d3d85d3 59 ---DKTSATVICRKNASISVRAQ 78 (94)
T ss_dssp ---SSSEEEECCCSSCEEEEEEE
T ss_pred ---cceEEEecCCCCEEEEEEEe
Confidence 00113578999999999754
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.50 E-value=1.1 Score=44.69 Aligned_cols=23 Identities=9% Similarity=0.047 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008826 389 RVEMEALLYSYGVDIVFNGHVHA 411 (552)
Q Consensus 389 r~~l~~ll~~~~VdlvlsGH~H~ 411 (552)
.+++.+.++++++++++=||.=.
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~ 271 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQ 271 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC
T ss_pred hHHHHHHHHHcCCcEEEEcCcch
Confidence 36788999999999999999863
|