Citrus Sinensis ID: 008916

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------55
MRDVNTDLFDPRTEMDSDISRSASSSDGDFGFAFNDSNFSDRLLRIEIMGDPPESRSDGEGCTSIADWARDRKRRREDIKKDNGLDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
ccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHccccccccccEEEEEccEEEEECHHHHHcccHHHHHHHccccccccccEEEEEEccccHHHHHHHHHHHHccEEEEcccccHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccHHHHcccHHHHHHHccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHccccccccHHHHHHHHHHHcccccccccccccccccccccccEEEccccccccEEEEEEEcccCEEEEEcccccccccEEcccccEEEEEEEEccCEEEEEEECcccccccCEEEEEEEcccccccEEEEEEEEEEEcccccccccccccccEEEcccccccccccccccccEEECccccEEEccEEEEEEEEEEcc
******D*FDPRTE***************FGFAFNDSNFSDRLLRIEIMGD**********************************************************************************SWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR*
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MRDVNTDLFDPRTEMDSDISRSASSSDGDFGFAFNDSNFSDRLLRIEIMGDPPESRSDGEGCTSIADWARDRKRRREDIKKDNGLDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
BTB/POZ domain-containing protein POB1 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.confidentQ9FPW6
BTB/POZ domain-containing protein At2g46260 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.probableO82343

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3I3N, chain A
Confidence level:very confident
Coverage over the Query: 126-378
View the alignment between query and template
View the model in PyMOL
Template: 3HQI, chain A
Confidence level:very confident
Coverage over the Query: 66-274
View the alignment between query and template
View the model in PyMOL
Template: 2ZWA, chain A
Confidence level:confident
Coverage over the Query: 316-539
View the alignment between query and template
View the model in PyMOL