Citrus Sinensis ID: 008959

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------
Protein Sequence
MGHGSSKEDESVSRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRFGLLLC
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHccccccccccccccccccccccccccccccEEEEEEEcHHcccccccEEEEEEccEEEEccccccccccccccccccEEccccccEEEEccccccccccccccccccccccccccEEEEEEEEEcHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccHHHHHHcccccccccccHHHHHHHHHHccccccccccccccccccccccccccEEEEEEccccccccEEEEcccccccccccHHHHHHHccccccccccccccccccccEEEEcccccEEEEEEHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccccccccccHHcccccccccccccccccccEEEEccccEEEEccccccccEEEEccccccHHHccccccccccccccEEEEEEEccccccEEEEccccEEEEEEEEcccEEcccHHHHHHccccccccEEEEEEEEEccccccEEEEEEEcEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccEEcHccHHHHHHEHEEEccccccccEEEEEEcccEEEEEEcccccccccccccEEEEEEccccEEEEEEEEccccccEEEEEccccccccEEEEEEEEEEEEEccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccHHHHHHHHHHHcccccccEcHHHHHHHHHHcccccccEcccccccccccccccccEEEEEEEEccHHccccEEccccccHHHHHHHHHHHHHHHHHcccEEEcccccccEEEEEEEcccccEEEEEHHHHHHHHEEEEEcccccccHHHHHHHHHHHHHHHHHcHccccHHHHHHHHHHHHHHHHcccHHHHHccHHHHccHHHHHHHHcccccccccccccccEEEEccccEEEEEcccccccEEEEEccEEEHHHHHccHHHHHHHccccEEEEEEccccccEEEccccccccccEEEcccEEEccHHHHHHccccEEEccEEEEEEEcccccccEEEEEEcccccccccEEEcc
Coil and Loop (DISEMBL)
mghgsskedesvsrtSRFRKKFHLHRErrrsrgngsnsgshhhnrvlneedFAGIALLTLISAEMKFKDKWLACVSLGEQTCrtaisdntdkpiwnsEKKLLletngphvarisvfedsdadsevfdlldpsssnkivgkislscsvedpietEKSFARRILSIVdynqdgqlsFKEFSDLISAFGNQVAANKKEELFKAadkngdgvVSVDELAALLALQQekeplmnccpvcgetlEVADMVNTMIHLTLcfdegtgnqvmtggfltdkqasNVWMFKlsewghfssydvglnsgsrahILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKqgrkmnsvesskeipKFVNFFKDQInladvkyplehfKTFNEFFIRelkpgarpidcmeREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQgllgndicsnsflngTMVIFrlapqdyhrfhlpvsgiieqfvdipgclytvnpiavnskycnvftenKRVVSIISTAhfgkvchysrshshshsrfglllc
Flexible Loop (DISEMBL)
mghgsskedesvsrtsrfrkkfhlhrerrrsrgngsnsgshhhnrvlneEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCrtaisdntdkpiwNSEKKLLLETNGPHVARISVFEDSDADSEVFDlldpsssnkivgkislscsvedpiETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISekqgrkmnsvesskeipkFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHysrshshshsrfglllc
Low Complexity Region (SEG)
MGHGSSKEDESVSRTSRFRKKFHLhrerrrsrgngsnsgshhhnrVLNEEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDElaallalQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYsrshshshsrFGLLLC
Disordered region (IsUnstruct)
**********************************************LNEEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFE*******VFDL*******KIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELL*******************IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYS***************
Disordered Region (DISOPRED)
***************************************************FAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAAN*K*************************LQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHS*FGLLLC
Disordered Region (DISEMBL)
****************RFRKKF********************HNRVLNEEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISE************KEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH***********FGLLLC
Disordered Region (DISPRO)
*******************************************NRVLNEEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRFGLLLC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGHGSSKEDESVSRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRFGLLLC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	547	2.2.26 [Sep-21-2011]
O14111	967	Phosphatidylserine decarb	yes	no	0.539	0.305	0.371	3e-49
P53037	1138	Phosphatidylserine decarb	yes	no	0.493	0.237	0.370	6e-40
Q8RGF2	300	Phosphatidylserine decarb	yes	no	0.329	0.6	0.383	2e-32
A0Q3R9	295	Phosphatidylserine decarb	yes	no	0.393	0.728	0.363	5e-31
B0BAF4	301	Phosphatidylserine decarb	yes	no	0.396	0.720	0.340	4e-28
P0CD79	301	Phosphatidylserine decarb	yes	no	0.281	0.511	0.401	4e-28
Q3KKZ5	301	Phosphatidylserine decarb	yes	no	0.281	0.511	0.401	4e-28
B0B8S5	301	Phosphatidylserine decarb	yes	no	0.281	0.511	0.401	4e-28
Q0TV39	294	Phosphatidylserine decarb	yes	no	0.396	0.738	0.349	2e-27
Q0SWT6	294	Phosphatidylserine decarb	yes	no	0.396	0.738	0.344	7e-27

>sp|O14111|PSD3_SCHPO Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd3 PE=3 SV=2

 Score =  196 bits (499), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 175/304 (57%), Gaps = 9/304 (2%)

Query: 228 MNCCPVCGE-TLEVADMVNTMIHLTLC--FDEGTGNQVMTGGFLTDKQASNVWMFKLSEW 284
           ++ CP+C +  L   +     +HL  C   D    +++M   +++  QA   W  K    
Sbjct: 578 LSNCPLCLKFKLSKVNQQKATVHLATCASHDWKRVDRLMMTSYVSLNQAQRRWFSKAFAK 637

Query: 285 GHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKE 344
             + S  VG  S   A  LV +R+T ++ EE ++  + + +R +Y+      +     K+
Sbjct: 638 VVYGSSKVGSTS---ATTLVQNRQTGQIQEEKMNAYVRIGIRLLYRGIRNRRIEGSKVKK 694

Query: 345 LLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGA 404
           +L+S++ KQG K +S  S KEI  F+ FF   +N+ +V  P+  FKTFNEFF R+LKPG+
Sbjct: 695 ILRSLTLKQGMKYDSPISVKEIKPFIRFF--DLNMNEVDMPVGGFKTFNEFFYRKLKPGS 752

Query: 405 RPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMV 464
           RP    +  ++ V  ADSR++A++ +E +  +WIKG +F+++ LLG    +  F+ G++ 
Sbjct: 753 RPCAFPDNPDILVSPADSRIVAYECIEKATTYWIKGTEFTVERLLGYSNEAQRFVGGSIC 812

Query: 465 IFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAH 524
           I RLAPQDYHRFH PV+G I     I G  YTVNP+A+ S Y +VF EN RV+  I +  
Sbjct: 813 ISRLAPQDYHRFHSPVNGCIGPITKIEGQYYTVNPMAIRS-YLDVFGENVRVLIPIDSNE 871

Query: 525 FGKV 528
           FGKV
Sbjct: 872 FGKV 875

May be involved in the regulation of phospholipid biosynthesis and interorganelle trafficking of phosphatidylserine (By similarity). Together with psd1 and psd2, responsible for the majority of phosphatidylethanolamine synthesis.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 6EC: 5

>sp|P53037|PSD2_YEAST Phosphatidylserine decarboxylase proenzyme 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSD2 PE=1 SV=1

 Score =  166 bits (419), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 163/286 (56%), Gaps = 16/286 (5%)

Query: 247  MIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFD 306
            + H  +C      ++ +   +++   AS  W  K+     +  Y +G N+   A+ILV D
Sbjct: 737  ITHFAIC-TFSKEHKTLKPSYVSSAFASKRWFSKVLIKLTYGKYALGSNN---ANILVQD 792

Query: 307  RRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEI 366
            R T  ++EE I   + + MR IY    G        + LLK++S +QG+K +S  S+K+I
Sbjct: 793  RDTGIIIEEKISAHVKLGMRIIYN---GKSPESKKFRSLLKTLSIRQGKKFDSTASAKQI 849

Query: 367  PKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMA 426
              F+ F    ++L+  +   + FKTFNEFF R+LKPG+R +     +E+    ADSR   
Sbjct: 850  EPFIKFH--SLDLSQCRD--KDFKTFNEFFYRKLKPGSR-LPESNNKEILFSPADSRCTV 904

Query: 427  FKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFL--NGTMVIFRLAPQDYHRFHLPVSGII 484
            F ++++S   W+KG+KFSI+ L  N+    +F   N ++ IFRLAPQDYHRFH P +G I
Sbjct: 905  FPTIQESKEIWVKGRKFSIKKL-ANNYNPETFNDNNCSIGIFRLAPQDYHRFHSPCNGTI 963

Query: 485  EQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
             + V + G  YTVNP+AV S+  +VF EN RV+  I +  FGK+ +
Sbjct: 964  GKPVYVDGEYYTVNPMAVRSE-LDVFGENIRVIIPIDSPQFGKLLY 1008

May be involved in the regulation of phospholipid biosynthesis and interorganelle trafficking of phosphatidylserine.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q8RGF2|PSD_FUSNN Phosphatidylserine decarboxylase proenzyme OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=psd PE=3 SV=1

 Score =  140 bits (353), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 116/185 (62%), Gaps = 5/185 (2%)

Query: 347 KSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARP 406
           K +S+  GRKM+  ES ++I  FV   + +I++++ K P+E + +FN+FF RELK GAR 
Sbjct: 47  KFLSDWYGRKMSKPESKEKIKSFVE--EMEIDMSEYKRPIEDYASFNDFFYRELKDGARK 104

Query: 407 IDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIF 466
           ID    E V V  AD +++A++++++  +F++KG KF+++    +   +  + +GT VI 
Sbjct: 105 IDY--NENVIVSPADGKILAYQNIKEVDKFFVKGSKFTLEEFFNDKELAKKYEDGTFVIV 162

Query: 467 RLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFG 526
           RLAP DYHRFH PV G I +   I G  Y+V+  A+ + +  +F ENKR  +I+ T  FG
Sbjct: 163 RLAPADYHRFHFPVDGEISEIKKILGYYYSVSTHAIKTNF-RIFCENKREYAILKTEKFG 221

Query: 527 KVCHY 531
            +  +
Sbjct: 222 DIAMF 226

Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) (taxid: 190304)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|A0Q3R9|PSD_CLONN Phosphatidylserine decarboxylase proenzyme OS=Clostridium novyi (strain NT) GN=psd PE=3 SV=1

 Score =  136 bits (342), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 135/234 (57%), Gaps = 19/234 (8%)

Query: 302 ILVFDRRTKRLVEELIDVKIVMS---MRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMN 358
           I VF+R+     E++ D++ V     ++ IY S +GL  +++  K+  K  S+  G+  +
Sbjct: 2   IKVFNRK-----EKIYDIEKVAGDNYLKWIYSSPVGLNFLELMIKK--KFFSKLYGKYCD 54

Query: 359 SVESSKEIPKFVNFFKDQINLADVKYPLEH--FKTFNEFFIRELKPGARPIDCMEREEVA 416
           S  S+K++ KF+    D  N+ + ++ L+   FK+FN+FF R+L   ARPI  +  E + 
Sbjct: 55  SKHSAKKVSKFI----DDFNINEKEFTLKKSDFKSFNDFFYRKLNNDARPI--INDENIL 108

Query: 417 VCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRF 476
           +  AD RL A+++++      +KG  +S+  LL N   +  ++ GT ++FRLAP DYHRF
Sbjct: 109 ISPADGRLFAYENIDIHNLIQVKGLTYSLDELLKNIELAEKYIGGTCLLFRLAPVDYHRF 168

Query: 477 HLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
           H    GI E+ V I G  Y+VNPIA+  K   +F ENKR  SI  + HFG V +
Sbjct: 169 HFIDDGICEEAVKISGSYYSVNPIAL-EKVPKLFCENKREYSIFHSKHFGDVLY 221

Clostridium novyi (strain NT) (taxid: 386415)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|B0BAF4|PSD_CHLTB Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) GN=psd PE=3 SV=1

 Score =  126 bits (317), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 130/232 (56%), Gaps = 15/232 (6%)

Query: 302 ILVFDRRTKRLVEELIDVKIVMSMRAIY-QSKIGLGLMDIGTKELLKSISEKQGRKMNSV 360
           +L  +R T ++ +E I   I  S+   + +++IG  L  +  K  L S      R +   
Sbjct: 6   MLYVNRETGKVEQERI---ICSSLVKFFIETRIGRALYSVLCKNSLFS------RIVGWC 56

Query: 361 ESSKEIPKFVNFF--KDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVC 418
           +  +    F+  F  K +I + +   PL  + +FN+FF+R+LKP ARPI   + E++ V 
Sbjct: 57  QRLRVTRYFIKPFVTKYRICIEESASPLHDYASFNDFFVRKLKPDARPI--CQGEDICVT 114

Query: 419 AADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHL 478
            AD   + F S+ D   F IK + FS++  LG+   ++ +  G+M I RLAP DYHRFH 
Sbjct: 115 PADGAYLVFPSMADLSLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIARLAPFDYHRFHF 174

Query: 479 PVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
           P++GI E    I G L++++P+ +   +  VFTENKR ++II++  FG+V +
Sbjct: 175 PIAGIAEAPRRINGHLFSIHPLMLKRNF-EVFTENKREITIITSKEFGEVAY 225

Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) (taxid: 471473)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|P0CD79|PSD_CHLTR Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=psd PE=3 SV=1

 Score =  126 bits (317), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 99/157 (63%), Gaps = 3/157 (1%)

Query: 374 KDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDS 433
           K +I + +   PL  + +FN+FF+R+LKP ARPI   + E++ V  AD   + F S+ D 
Sbjct: 72  KYRICIEESASPLHDYASFNDFFVRKLKPDARPI--CQGEDICVTPADGAYLVFPSMADL 129

Query: 434 LRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGC 493
             F IK + FS++  LG+   ++ +  G+M I RLAP DYHRFH P++GI E    I G 
Sbjct: 130 SLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIARLAPFDYHRFHFPIAGIAEAPRRINGH 189

Query: 494 LYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
           L++++P+ +   +  VFTENKR ++II++  FG+V +
Sbjct: 190 LFSIHPLMLKRNF-EVFTENKREITIITSKEFGEVAY 225

Chlamydia trachomatis (strain D/UW-3/Cx) (taxid: 272561)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q3KKZ5|PSD_CHLTA Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis serovar A (strain HAR-13 / ATCC VR-571B) GN=psd PE=3 SV=1

 Score =  126 bits (317), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 99/157 (63%), Gaps = 3/157 (1%)

Query: 374 KDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDS 433
           K +I + +   PL  + +FN+FF+R+LKP ARPI   + E++ V  AD   + F S+ D 
Sbjct: 72  KYRICIEESASPLHDYASFNDFFVRKLKPDARPI--CQGEDICVTPADGAYLVFPSMADL 129

Query: 434 LRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGC 493
             F IK + FS++  LG+   ++ +  G+M I RLAP DYHRFH P++GI E    I G 
Sbjct: 130 SLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIARLAPFDYHRFHFPIAGIAEAPRRINGH 189

Query: 494 LYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
           L++++P+ +   +  VFTENKR ++II++  FG+V +
Sbjct: 190 LFSIHPLMLKRNF-EVFTENKREITIITSKEFGEVAY 225

Chlamydia trachomatis serovar A (strain HAR-13 / ATCC VR-571B) (taxid: 315277)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|B0B8S5|PSD_CHLT2 Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) GN=psd PE=3 SV=1

 Score =  126 bits (317), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 99/157 (63%), Gaps = 3/157 (1%)

Query: 374 KDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDS 433
           K +I + +   PL  + +FN+FF+R+LKP ARPI   + E++ V  AD   + F S+ D 
Sbjct: 72  KYRICIEESASPLHDYASFNDFFVRKLKPDARPI--CQGEDICVTPADGAYLVFPSMADL 129

Query: 434 LRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGC 493
             F IK + FS++  LG+   ++ +  G+M I RLAP DYHRFH P++GI E    I G 
Sbjct: 130 SLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIARLAPFDYHRFHFPIAGIAEAPRRINGH 189

Query: 494 LYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
           L++++P+ +   +  VFTENKR ++II++  FG+V +
Sbjct: 190 LFSIHPLMLKRNF-EVFTENKREITIITSKEFGEVAY 225

Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) (taxid: 471472)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q0TV39|PSD_CLOP1 Phosphatidylserine decarboxylase proenzyme OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=psd PE=3 SV=1

 Score =  124 bits (311), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 128/232 (55%), Gaps = 15/232 (6%)

Query: 302 ILVFDRRTKRLVEELIDVKIVMSMRAI---YQSKIGLGLMDIGTKELLKSISEKQGRKMN 358
           I +++R+TK       DV+ V  ++ I   Y S IG   +++  K+  K  S+  G   +
Sbjct: 2   IKIYNRKTKAY-----DVEQVAGLKYINWSYASPIGKSFLELFIKK--KMFSKLYGNFCD 54

Query: 359 SVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVC 418
           S  S K+I  F++ F   ++L +    ++ F+ FN+FF R L P ARPID    E + + 
Sbjct: 55  SSLSKKKIKAFIDEFNIDMSLCNKN--IDEFENFNDFFARTLTPEARPID--YSENILIS 110

Query: 419 AADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHL 478
             D RL AF++++ +    IKG  +S++ L+ +   +  F  GT +I RL P DYHRFH 
Sbjct: 111 PGDGRLSAFENIDLNKVVQIKGYTYSLKELIDDPKVAEEFEGGTCLILRLCPTDYHRFHF 170

Query: 479 PVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
             SG   +   I G  Y+VNPIA+N+    +F +NKR  SI ++ +FGK+ H
Sbjct: 171 VDSGTCSESKKISGFYYSVNPIALNN-VSELFCKNKREWSIFNSDNFGKILH 221

Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) (taxid: 195103)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

>sp|Q0SWT6|PSD_CLOPS Phosphatidylserine decarboxylase proenzyme OS=Clostridium perfringens (strain SM101 / Type A) GN=psd PE=3 SV=1

 Score =  122 bits (306), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 127/232 (54%), Gaps = 15/232 (6%)

Query: 302 ILVFDRRTKRLVEELIDVKIVMSMRAI---YQSKIGLGLMDIGTKELLKSISEKQGRKMN 358
           I +++R+TK       DV+ V  ++ I   Y S IG   +++  K+  K  S+  G   +
Sbjct: 2   IKIYNRKTKAY-----DVEQVAGLKYINWSYASPIGKSFLELFIKK--KMFSKLYGNFCD 54

Query: 359 SVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVC 418
           S  S K+I  F++ F   ++L +    ++ F+ FN+FF R L P ARPID    E + + 
Sbjct: 55  SPLSKKKIKAFIDEFNIDMSLCNKN--IDEFENFNDFFARTLTPEARPIDY--SENILIS 110

Query: 419 AADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHL 478
             D RL AF++++      IKG  +S++ L+ +   +  F  GT +I RL P DYHRFH 
Sbjct: 111 PGDGRLSAFENIDLDKVVQIKGYTYSLKELIDDPKVAEEFEGGTCLILRLCPTDYHRFHF 170

Query: 479 PVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
             SG   +   I G  Y+VNPIA+N+    +F +NKR  SI ++ +FG++ H
Sbjct: 171 VDSGTCSESKKISGFYYSVNPIALNN-VSELFCKNKREWSIFTSDNFGEILH 221

Clostridium perfringens (strain SM101 / Type A) (taxid: 289380)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	547
225447822	640	PREDICTED: C2 domain-containing protein	0.946	0.809	0.735	0.0
356525902	627	PREDICTED: C2 domain-containing protein	0.956	0.834	0.723	0.0
357445723	631	Phosphatidylserine decarboxylase [Medica	0.954	0.827	0.694	0.0
240256448	635	phosphatidylserine decarboxylase 2 [Arab	0.963	0.829	0.701	0.0
126673485	648	phosphatidylserine decarboxylase [Arabid	0.963	0.813	0.699	0.0
255570988	633	phosphatidylserine decarboxylase, putati	0.943	0.815	0.738	0.0
297803508	636	phosphatidylserine decarboxylase [Arabid	0.959	0.825	0.695	0.0
186513660	635	phosphatidylserine decarboxylase 3 [Arab	0.957	0.825	0.700	0.0
8843821	615	phosphatidylserine decarboxylase [Arabid	0.961	0.855	0.698	0.0
449478940	661	PREDICTED: LOW QUALITY PROTEIN: phosphat	0.965	0.798	0.697	0.0

>gi|225447822|ref|XP_002267948.1| PREDICTED: C2 domain-containing protein C31G5.15-like [Vitis vinifera]

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/556 (73%), Positives = 455/556 (81%), Gaps = 38/556 (6%)

Query: 1   MGHGSSK----EDESVSRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAGIA 56
           MG+GSSK    +D S SR +R  +K H                S  HN+ L  EDFAGIA
Sbjct: 1   MGNGSSKSTHQQDSSSSRVARVWRKIHHSS---------HRHVSSSHNKRLAAEDFAGIA 51

Query: 57  LLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVF 116
           LLTL  AEMKFKDKWLACVS+GEQT RT  SD TDKP+WNSEKK L+E NGPH+ARIS+F
Sbjct: 52  LLTLHGAEMKFKDKWLACVSVGEQTFRTETSDQTDKPVWNSEKKFLMERNGPHIARISIF 111

Query: 117 E-----------------------DSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIET 153
           E                       DS++DSEV DL DPSSS   VGKI +SCSVEDP ET
Sbjct: 112 ETNRLSKSNLVGHCEIDLFEFLTQDSESDSEVLDLFDPSSSGIAVGKIKVSCSVEDPTET 171

Query: 154 EKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 213
           E+SF RRILSIVDYN+DG+LS  EFS+LI AFGNQVAA KKEELFKAADKN DGVVS+DE
Sbjct: 172 ERSFVRRILSIVDYNEDGKLSSSEFSELIKAFGNQVAAEKKEELFKAADKNEDGVVSMDE 231

Query: 214 LAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQA 273
           L  LLA+QQEKEPL++CCPVCGE L+ +D +N MIH+ LCFDEGTGNQVMTGGFLTDKQA
Sbjct: 232 LTVLLAIQQEKEPLISCCPVCGEVLD-SDKLNNMIHMNLCFDEGTGNQVMTGGFLTDKQA 290

Query: 274 SNVWMFKLSEWGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSK 332
           S  WMFKLSEW HFSSYD+GLNSGS A HILVFDRRTKRLVEELID KIV+SMRAIYQSK
Sbjct: 291 SYGWMFKLSEWAHFSSYDIGLNSGSSASHILVFDRRTKRLVEELIDGKIVLSMRAIYQSK 350

Query: 333 IGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTF 392
           +GLGLMD G KELL+ ISEKQG++MNSVES+K+IPKF+ FF+DQI L +VKYPLEHFKTF
Sbjct: 351 LGLGLMDAGAKELLQRISEKQGKQMNSVESAKDIPKFLKFFEDQIKLDEVKYPLEHFKTF 410

Query: 393 NEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGND 452
           NEFFIRELKPGARPI CMER++VAVCAADSRL AFKSVEDSLRFWIKG+KFSIQGLLG +
Sbjct: 411 NEFFIRELKPGARPIACMERDDVAVCAADSRLTAFKSVEDSLRFWIKGRKFSIQGLLGKE 470

Query: 453 ICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTE 512
           ICS+SF+NG++VIFRLAPQDYHRFH PVSG IE FVDIPGCLYTVNPIAVNSKYCNVFTE
Sbjct: 471 ICSSSFINGSLVIFRLAPQDYHRFHFPVSGTIECFVDIPGCLYTVNPIAVNSKYCNVFTE 530

Query: 513 NKRVVSIISTAHFGKV 528
           NKRVVS+IST+ FGKV
Sbjct: 531 NKRVVSVISTSDFGKV 546

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525902|ref|XP_003531560.1| PREDICTED: C2 domain-containing protein C31G5.15-like [Glycine max]

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/554 (72%), Positives = 459/554 (82%), Gaps = 31/554 (5%)

Query: 1   MGHGSSKEDESV-SRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAGIALLT 59
           MGH  SK  E   SR +RF+++  LH  RRRS GNGS+      +++L+ ++FAGIALL 
Sbjct: 1   MGHEHSKLSEGKGSRRARFKERLRLHFRRRRS-GNGSSD-----HKLLHADNFAGIALLA 54

Query: 60  LISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFE-- 117
           L+ AEMKFKDKW+AC+SLGEQT RT  SD+TDKP+WNSEKKLLLE NG HVARISVFE  
Sbjct: 55  LLRAEMKFKDKWIACLSLGEQTFRTNTSDHTDKPLWNSEKKLLLEQNGAHVARISVFETN 114

Query: 118 ---------------------DSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKS 156
                                DSD+D EVF+LLDPS   K+VG IS+SC+VEDPIETEK 
Sbjct: 115 RMSSNTLVGYCEVDLLEFLTKDSDSDVEVFNLLDPSVPGKVVGNISISCTVEDPIETEKG 174

Query: 157 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAA 216
           F RRILSIVDYN+DG LS  EFSDLI AFGNQVA +KKEELFKAADKNGDGVVS+DELA+
Sbjct: 175 FVRRILSIVDYNEDGMLSLSEFSDLIDAFGNQVATSKKEELFKAADKNGDGVVSMDELAS 234

Query: 217 LLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNV 276
           LL   QE+EPL+NCCPVCGE L+++D +N+MIHLTLCFDEGTGNQVM GGFLTDKQAS  
Sbjct: 235 LLTFHQEREPLLNCCPVCGEVLQISDQLNSMIHLTLCFDEGTGNQVMAGGFLTDKQASYG 294

Query: 277 WMFKLSEWGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGL 335
           W FKLSEW HFSSYDVG+ SGS A HILV+DR+++RLVEE+ID KIV+SMRAIYQSKIGL
Sbjct: 295 WFFKLSEWAHFSSYDVGIRSGSSASHILVYDRKSQRLVEEIIDKKIVLSMRAIYQSKIGL 354

Query: 336 GLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEF 395
           GLMDIG KELL+SISEKQG +M+S ESS +IPKF+  FKDQINLA+VKYPLEHFKTFNEF
Sbjct: 355 GLMDIGVKELLQSISEKQGARMDSPESSADIPKFIESFKDQINLAEVKYPLEHFKTFNEF 414

Query: 396 FIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICS 455
           FIRELKPG+RPI   ER++VAVCAAD RL AFKSV+DS RFWIKG+KFS+QGLLG ++CS
Sbjct: 415 FIRELKPGSRPIASAERDDVAVCAADCRLTAFKSVDDSTRFWIKGRKFSVQGLLGKEMCS 474

Query: 456 NSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKR 515
           ++F++G MVIFRLAPQDYHRFH PVSGIIEQ VDIPGCLYTVNPIAVNSKYCNVFTENKR
Sbjct: 475 SAFVDGPMVIFRLAPQDYHRFHFPVSGIIEQSVDIPGCLYTVNPIAVNSKYCNVFTENKR 534

Query: 516 VVSIISTAHFGKVC 529
           VVSI+ST  FGKV 
Sbjct: 535 VVSIVSTVDFGKVA 548

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445723|ref|XP_003593139.1| Phosphatidylserine decarboxylase [Medicago truncatula] gi|355482187|gb|AES63390.1| Phosphatidylserine decarboxylase [Medicago truncatula]

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/559 (69%), Positives = 452/559 (80%), Gaps = 37/559 (6%)

Query: 1   MGHGSSKEDESV------SRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAG 54
           MGH  SK  ES       SR +R + + HLHR R+    + SN       ++L+ + F G
Sbjct: 1   MGHEYSKLSESTGEGNKGSRRARLKNRLHLHRHRKTPSTSSSN-------KLLSVDTFTG 53

Query: 55  IALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARIS 114
           IAL  L+ AEM+FKDKW+AC+SLGEQT RT  SD TDKP+WNSEKKLLLE NGPH+AR+S
Sbjct: 54  IALFALLRAEMQFKDKWIACLSLGEQTFRTKSSDQTDKPVWNSEKKLLLEQNGPHIARVS 113

Query: 115 VFE-----------------------DSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPI 151
           V+E                       DSD+D E F+LLDPS   K+VG IS+SCSVEDPI
Sbjct: 114 VYETNKLSSNTLVGYCEIDLLEFLSQDSDSDIETFNLLDPSVPGKVVGNISISCSVEDPI 173

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
           ETEK F RRILSI+DYN DG LSF EFSDLI AFGNQ+A  KKEELFKAADKNGDGVVS+
Sbjct: 174 ETEKGFVRRILSIMDYNGDGMLSFSEFSDLIDAFGNQLATRKKEELFKAADKNGDGVVSM 233

Query: 212 DELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDK 271
           DELA+LLALQQEKEPL+NCCPVCGE L+++D +N+MIHLTLCFDEGTGNQVMTGGFLTDK
Sbjct: 234 DELASLLALQQEKEPLLNCCPVCGEVLQISDQLNSMIHLTLCFDEGTGNQVMTGGFLTDK 293

Query: 272 QASNVWMFKLSEWGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQ 330
           QAS  W+FK+SEW HFSSYDVG+ SGS + HILV+DR+++RLVEE ID KIV+SMRAIYQ
Sbjct: 294 QASYGWLFKMSEWAHFSSYDVGIRSGSSSSHILVYDRKSQRLVEEQIDKKIVLSMRAIYQ 353

Query: 331 SKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFK 390
           SKIGLGLMDIG KELL+SISEKQG KM+S+ES+ +IPKFV  +K QI+LA+VKYPLEHFK
Sbjct: 354 SKIGLGLMDIGVKELLQSISEKQGAKMDSLESAADIPKFVESYKGQISLAEVKYPLEHFK 413

Query: 391 TFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLG 450
           TFNEFFIRELKPG+RPI   E + +AVC AD RLMAFKSV++S RFWIKG+KFS+QGLLG
Sbjct: 414 TFNEFFIRELKPGSRPIASAEHDNIAVCGADCRLMAFKSVDESSRFWIKGRKFSVQGLLG 473

Query: 451 NDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVF 510
            ++CS++F++GT+VIFRLAPQDYHRFHLPVSG IEQFV+IPG L+TVNPIAVNSKYCNVF
Sbjct: 474 KEMCSSAFVDGTLVIFRLAPQDYHRFHLPVSGTIEQFVNIPGSLFTVNPIAVNSKYCNVF 533

Query: 511 TENKRVVSIISTAHFGKVC 529
           TEN RVVSIIST  FGKV 
Sbjct: 534 TENTRVVSIISTVDFGKVA 552

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240256448|ref|NP_200529.4| phosphatidylserine decarboxylase 2 [Arabidopsis thaliana] gi|332009481|gb|AED96864.1| phosphatidylserine decarboxylase 2 [Arabidopsis thaliana]

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/553 (70%), Positives = 455/553 (82%), Gaps = 26/553 (4%)

Query: 1   MGHGSSKEDESVSRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAGIALLTL 60
           MG+G+S+E +  SR SR R K    R  RR   +  NS      R ++ EDF+GIALLTL
Sbjct: 1   MGNGNSREAKE-SRRSRLRHKLQKFRIHRRHLRSSRNSAGMVIQRTVSAEDFSGIALLTL 59

Query: 61  ISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFE--- 117
           I AEMKFKDKWLACVS GEQT RT ISD T KPIWNSEKKLLLE NGP +AR+SVFE   
Sbjct: 60  IGAEMKFKDKWLACVSFGEQTFRTEISDTTQKPIWNSEKKLLLEKNGPSLARVSVFETNR 119

Query: 118 --------------------DSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSF 157
                               + ++  + F+LLDP+SSN +VG I LSC++EDP+ETE+ F
Sbjct: 120 VARNKIIGYCELDIFDFVVQEPESTCKSFNLLDPTSSN-VVGSIFLSCAIEDPVETERRF 178

Query: 158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAAL 217
           A+RILSIVDYN+DGQLSF EFSDLI AFGN VAANKKEELFKAAD NGDGVV++DELAAL
Sbjct: 179 AKRILSIVDYNEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAAL 238

Query: 218 LALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVW 277
           LALQQE+EP++N CPVCGE L+V+D +N MIH+TLCFDEGTGNQVMTGGFLTD+QAS  W
Sbjct: 239 LALQQEQEPIINNCPVCGEALQVSDKLNAMIHMTLCFDEGTGNQVMTGGFLTDRQASYGW 298

Query: 278 MFKLSEWGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLG 336
           MFKLSEW H S+YDVGLN+GS A +I+V DR++KRLVEELID KIV+SMRAIYQSKIGL 
Sbjct: 299 MFKLSEWTHLSTYDVGLNTGSSASYIVVIDRKSKRLVEELIDSKIVLSMRAIYQSKIGLR 358

Query: 337 LMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFF 396
           LMD G KE+L+ +SEKQG+KM+SVES+++IP+F+ FFKDQIN+A+VKYPL+HFKTFNEFF
Sbjct: 359 LMDQGAKEILQRLSEKQGKKMSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFF 418

Query: 397 IRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSN 456
           IRELKPGARPI CM R +VAVCAAD RLMAF+SVEDS RFWIKG+KFSI+GLLG ++  N
Sbjct: 419 IRELKPGARPIACMNRNDVAVCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPN 478

Query: 457 SFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRV 516
           +FL+G++VIFRLAPQDYHRFH+PVSG+IEQFVD+ G LYTVNPIAVNSKYCNVFTENKR 
Sbjct: 479 AFLDGSLVIFRLAPQDYHRFHVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRT 538

Query: 517 VSIISTAHFGKVC 529
           V+IISTA FGKV 
Sbjct: 539 VAIISTAEFGKVA 551

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|126673485|gb|ABO26298.1| phosphatidylserine decarboxylase [Arabidopsis thaliana]

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/553 (69%), Positives = 454/553 (82%), Gaps = 26/553 (4%)

Query: 1   MGHGSSKEDESVSRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAGIALLTL 60
           MG+G+S+E +  SR SR R K    R  RR   +  NS      R ++ EDF+GIALLTL
Sbjct: 14  MGNGNSREAKE-SRRSRLRHKLQKFRIHRRHLRSSRNSAGMVIQRTVSAEDFSGIALLTL 72

Query: 61  ISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFE--- 117
           I AEMKFKDKWLACVS GEQT RT ISD T KPIWNSEKKLLLE NGP +AR+SVFE   
Sbjct: 73  IGAEMKFKDKWLACVSFGEQTFRTEISDTTQKPIWNSEKKLLLEKNGPSLARVSVFETNR 132

Query: 118 --------------------DSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSF 157
                               + ++  + F+LLDP+SSN +VG I LSC++EDP+ETE+ F
Sbjct: 133 VARNKIIGYCELDIFDFVVQEPESTCKSFNLLDPTSSN-VVGSIFLSCAIEDPVETERRF 191

Query: 158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAAL 217
           A+RILSIVDYN+DGQLSF EFSDLI AFGN VAANKKEELFKAAD NGDGVV++DELAAL
Sbjct: 192 AKRILSIVDYNEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAAL 251

Query: 218 LALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVW 277
           LALQQE+EP++N CPVCGE L+V+D +N MIH+TLCFDEGTGNQVMTGGFLTD+QAS  W
Sbjct: 252 LALQQEQEPIINNCPVCGEALQVSDKLNAMIHMTLCFDEGTGNQVMTGGFLTDRQASYGW 311

Query: 278 MFKLSEWGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLG 336
           MFKLSEW H S+YDVGLN+GS A +I+V DR++KRLVEELID KIV+SMRAIYQSKIGL 
Sbjct: 312 MFKLSEWTHLSTYDVGLNTGSSASYIVVIDRKSKRLVEELIDSKIVLSMRAIYQSKIGLR 371

Query: 337 LMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFF 396
           LMD G KE+L+ +SEKQG+KM+SVES+++IP+F+ FFK QIN+A+VKYPL+HFKTFNEFF
Sbjct: 372 LMDQGAKEILQRLSEKQGKKMSSVESAQKIPRFLEFFKGQINMAEVKYPLQHFKTFNEFF 431

Query: 397 IRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSN 456
           IRELKPGARPI CM R +VAVCAAD RLMAF+SVEDS RFWIKG+KFSI+GLLG ++  N
Sbjct: 432 IRELKPGARPIACMNRNDVAVCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPN 491

Query: 457 SFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRV 516
           +FL+G++VIFRLAPQDYHRFH+PVSG+IEQFVD+ G LYTVNPIAVNSKYCNVFTENKR 
Sbjct: 492 AFLDGSLVIFRLAPQDYHRFHVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRT 551

Query: 517 VSIISTAHFGKVC 529
           V+IISTA FGKV 
Sbjct: 552 VAIISTAEFGKVA 564

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570988|ref|XP_002526445.1| phosphatidylserine decarboxylase, putative [Ricinus communis] gi|223534225|gb|EEF35940.1| phosphatidylserine decarboxylase, putative [Ricinus communis]

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/546 (73%), Positives = 452/546 (82%), Gaps = 30/546 (5%)

Query: 1   MGHGSSK-------EDESVS--RTSRFRKKFHLHRERRR-----SRGNGSNSGSHHHNRV 46
           MGHGSSK       ED+S S  R SR + K H+HR   R     S GNGS  GS    ++
Sbjct: 1   MGHGSSKGFPESSEEDDSQSHSRRSRLKNKLHIHRRHLRRIFRRSNGNGSTPGSSCL-KL 59

Query: 47  LNEEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETN 106
           ++ EDFAGIALLTL+SAEMKFKDKWLACVSLGEQT RT ISD T+KP+WNSEKKLLLE +
Sbjct: 60  VSAEDFAGIALLTLMSAEMKFKDKWLACVSLGEQTFRTDISDQTEKPVWNSEKKLLLEKD 119

Query: 107 GPHVARISVFEDSDADSEVFDLLDPSSSNKIVGKIS---LSCSVEDPIETEKSFARRILS 163
           GPHVARISVFE +             S N +VG      L    +DPIETEK FARRIL+
Sbjct: 120 GPHVARISVFETNRI-----------SKNNLVGYCEIDLLEFLTQDPIETEKRFARRILA 168

Query: 164 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE 223
           IVDYN+DGQLSF EF DLI AFGNQ+AANKKEELFKAADKNGDGVVS+DELA LLA+QQE
Sbjct: 169 IVDYNEDGQLSFSEFCDLIKAFGNQLAANKKEELFKAADKNGDGVVSMDELADLLAIQQE 228

Query: 224 KEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSE 283
           KEPL+NCCPVCGE LEV+D +NT++HL+LCFDEGTGNQVMTGGFLTDKQAS  W+FKLSE
Sbjct: 229 KEPLINCCPVCGEILEVSDRLNTVVHLSLCFDEGTGNQVMTGGFLTDKQASYGWIFKLSE 288

Query: 284 WGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGT 342
           W HFSSYDVGLN GS A HILVFDR+TKRLVEELID KIVMSMR IYQSKIGL LMD G 
Sbjct: 289 WAHFSSYDVGLNLGSSASHILVFDRKTKRLVEELIDGKIVMSMRTIYQSKIGLRLMDKGA 348

Query: 343 KELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKP 402
            +LL+SISEKQGRKMNS ES+K+IPKF+  FKDQINLA++KYPLEHFKTFNEFFIRELKP
Sbjct: 349 NDLLRSISEKQGRKMNSAESAKQIPKFIESFKDQINLAEIKYPLEHFKTFNEFFIRELKP 408

Query: 403 GARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGT 462
            ARPI  +E ++VA+CAAD RLMAFK+V+DS RFWIKG+KFSI+GLLG DICS++F++G 
Sbjct: 409 SARPIAFLEHDDVAICAADCRLMAFKNVDDSSRFWIKGRKFSIEGLLGKDICSSTFVDGA 468

Query: 463 MVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIIST 522
           +VIFRLAPQDYHRFH PVSG IEQFVD+PG LYTVNPIAVNS+YCNVFTENKRVVSIIST
Sbjct: 469 LVIFRLAPQDYHRFHTPVSGTIEQFVDVPGHLYTVNPIAVNSEYCNVFTENKRVVSIIST 528

Query: 523 AHFGKV 528
           A FGKV
Sbjct: 529 AEFGKV 534

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803508|ref|XP_002869638.1| phosphatidylserine decarboxylase [Arabidopsis lyrata subsp. lyrata] gi|297315474|gb|EFH45897.1| phosphatidylserine decarboxylase [Arabidopsis lyrata subsp. lyrata]

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/555 (69%), Positives = 461/555 (83%), Gaps = 30/555 (5%)

Query: 1   MGHGSSKEDESVSRTSRFRKKFHLHRERRR-SR-GNGSNSGSHHHNRVLNEEDFAGIALL 58
           MG+G+S E +  SR S+ R+K    R RRR SR G+GS SG     R ++ +DFAGIALL
Sbjct: 1   MGNGNSTEAKE-SRRSKMRQKIQNFRSRRRLSRPGSGSVSGLVSQ-RSVSADDFAGIALL 58

Query: 59  TLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFE- 117
           TLI AEMKFKDKWLACVS GEQT R+ ISD+T+KPIWNSEKKLLLE NGP +ARISVFE 
Sbjct: 59  TLIGAEMKFKDKWLACVSFGEQTFRSQISDSTEKPIWNSEKKLLLEKNGPSLARISVFET 118

Query: 118 ----------------------DSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEK 155
                                 + D+  + FDLLDP+SSN +VG + +SCSVEDP+ETE 
Sbjct: 119 NRLLKNNIVGYCELDLLEFVVQEPDSACKSFDLLDPASSN-VVGSMFVSCSVEDPVETET 177

Query: 156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELA 215
            FA+RILSIVDY++DG+LSF EFSDL++AFGN VAANKKEELFKAAD NGDGVV++DELA
Sbjct: 178 CFAKRILSIVDYDEDGKLSFSEFSDLMNAFGNIVAANKKEELFKAADLNGDGVVTIDELA 237

Query: 216 ALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASN 275
           ALLA+QQE+EP++N CPVCGE L++ D +N MIH+TLCFDEGTGNQ MTGGFLTD+QAS 
Sbjct: 238 ALLAVQQEQEPIINSCPVCGEALQL-DKLNAMIHMTLCFDEGTGNQTMTGGFLTDRQASY 296

Query: 276 VWMFKLSEWGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIG 334
            WMFKLSEW H S+YDVGLN+GS A HI+V DR+TKRL+EELID KIVMSMRAIYQSKIG
Sbjct: 297 GWMFKLSEWTHLSTYDVGLNTGSSASHIVVIDRKTKRLMEELIDSKIVMSMRAIYQSKIG 356

Query: 335 LGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNE 394
           L LMD G KE+L+++SEKQG+KMN+VES++ IP F+ FFKDQIN+A+VKYPL+HFKTFNE
Sbjct: 357 LRLMDQGAKEILQNLSEKQGKKMNTVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNE 416

Query: 395 FFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDIC 454
           FF+RELKPGARPI CM++++VAV AAD RLM+F+SV+DS RFWIKG+KFSI+GLLGND+ 
Sbjct: 417 FFVRELKPGARPIACMDQDDVAVSAADCRLMSFQSVDDSTRFWIKGRKFSIKGLLGNDVQ 476

Query: 455 SNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENK 514
           S++FL+G++VIFRLAPQDYHRFH PVSG+IE+FV++ G LYTVNPIAVNSKYCNVFTENK
Sbjct: 477 SDAFLDGSLVIFRLAPQDYHRFHSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENK 536

Query: 515 RVVSIISTAHFGKVC 529
           R V IISTA FGKV 
Sbjct: 537 RTVVIISTAEFGKVA 551

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186513660|ref|NP_567736.3| phosphatidylserine decarboxylase 3 [Arabidopsis thaliana] gi|126673483|gb|ABO26297.1| phosphatidylserine decarboxylase [Arabidopsis thaliana] gi|332659738|gb|AEE85138.1| phosphatidylserine decarboxylase 3 [Arabidopsis thaliana]

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/555 (70%), Positives = 461/555 (83%), Gaps = 31/555 (5%)

Query: 1   MGHGSSKEDESVSRTSRFRKKFHLHRERRR-SR-GNGSNSGSHHHNRVLNEEDFAGIALL 58
           MG+G+S E +  SR S+ RKK    R RRR SR G+GS SG     R ++ +DFAGIALL
Sbjct: 1   MGNGNSTETKE-SRRSKMRKKIQNFRSRRRLSRPGSGSVSGLASQ-RSVSADDFAGIALL 58

Query: 59  TLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFE- 117
           TLI AEMKFKDKWLACVS GEQT R+ ISD+T+KPIWNSEKKLLLE NGP +ARISVFE 
Sbjct: 59  TLIGAEMKFKDKWLACVSFGEQTFRSEISDSTEKPIWNSEKKLLLEKNGPSLARISVFET 118

Query: 118 ----------------------DSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEK 155
                                 + D+  + FDLLDP+SSN +VG + +SCSVEDP+ETE 
Sbjct: 119 NRLLKNNIVGYCELDLLDFVVQEPDSTCKSFDLLDPASSN-VVGSMFVSCSVEDPVETET 177

Query: 156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELA 215
            FA+RILSIVDY++DG+LSF EFSDL++AFGN VAANKKEELFKAAD NGDGVV++DELA
Sbjct: 178 CFAKRILSIVDYDEDGKLSFSEFSDLMNAFGNVVAANKKEELFKAADLNGDGVVTIDELA 237

Query: 216 ALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASN 275
           ALLA+QQE+EP++N CPVCGE L++ D +N MIH+TLCFDEGTGNQ MTGGFLTD+QAS 
Sbjct: 238 ALLAVQQEQEPIINSCPVCGEALQL-DKLNAMIHMTLCFDEGTGNQ-MTGGFLTDRQASY 295

Query: 276 VWMFKLSEWGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIG 334
            WMFKLSEW H S+YDVGLN+GS A HI+V DR+TKRLVEELID KIVMSMRAIYQSKIG
Sbjct: 296 GWMFKLSEWTHLSTYDVGLNTGSSASHIVVIDRKTKRLVEELIDSKIVMSMRAIYQSKIG 355

Query: 335 LGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNE 394
           L LMD G KE+L+++SEKQG+KMNSVES++ IP F+ FFKDQIN+A+VKYPL+HFKTFNE
Sbjct: 356 LRLMDQGAKEILQNLSEKQGKKMNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNE 415

Query: 395 FFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDIC 454
           FF+RELKPGARPI CM++++VAV AAD RLMAF+SV+DS RFWIKG+KFSI+GLLGND+ 
Sbjct: 416 FFVRELKPGARPIACMDQDDVAVSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDVQ 475

Query: 455 SNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENK 514
           S++FL+G++VIFRLAPQDYHRFH PVSG+IE+FV++ G LYTVNPIAVNSKYCNVFTENK
Sbjct: 476 SDAFLDGSLVIFRLAPQDYHRFHSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENK 535

Query: 515 RVVSIISTAHFGKVC 529
           R + IISTA FGKV 
Sbjct: 536 RTIVIISTAEFGKVA 550

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8843821|dbj|BAA97369.1| phosphatidylserine decarboxylase [Arabidopsis thaliana]

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/534 (69%), Positives = 443/534 (82%), Gaps = 8/534 (1%)

Query: 1   MGHGSSKEDESVSRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAGIALLTL 60
           MG+G+S+E +  SR SR R K    R  RR   +  NS      R ++ EDF+GIALLTL
Sbjct: 1   MGNGNSREAKE-SRRSRLRHKLQKFRIHRRHLRSSRNSAGMVIQRTVSAEDFSGIALLTL 59

Query: 61  ISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVF---- 116
           I AEMKFKDKWLACVS GEQT RT ISD T KPIWNS  ++           + +F    
Sbjct: 60  IGAEMKFKDKWLACVSFGEQTFRTEISDTTQKPIWNSTNRVA-RNKIIGYCELDIFDFVV 118

Query: 117 EDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFK 176
           ++ ++  + F+LLDP+SSN +VG I LSC++EDP+ETE+ FA+RILSIVDYN+DGQLSF 
Sbjct: 119 QEPESTCKSFNLLDPTSSN-VVGSIFLSCAIEDPVETERRFAKRILSIVDYNEDGQLSFS 177

Query: 177 EFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGE 236
           EFSDLI AFGN VAANKKEELFKAAD NGDGVV++DELAALLALQQE+EP++N CPVCGE
Sbjct: 178 EFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGE 237

Query: 237 TLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNS 296
            L+V+D +N MIH+TLCFDEGTGNQVMTGGFLTD+QAS  WMFKLSEW H S+YDVGLN+
Sbjct: 238 ALQVSDKLNAMIHMTLCFDEGTGNQVMTGGFLTDRQASYGWMFKLSEWTHLSTYDVGLNT 297

Query: 297 GSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGR 355
           GS A +I+V DR++KRLVEELID KIV+SMRAIYQSKIGL LMD G KE+L+ +SEKQG+
Sbjct: 298 GSSASYIVVIDRKSKRLVEELIDSKIVLSMRAIYQSKIGLRLMDQGAKEILQRLSEKQGK 357

Query: 356 KMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEV 415
           KM+SVES+++IP+F+ FFKDQIN+A+VKYPL+HFKTFNEFFIRELKPGARPI CM R +V
Sbjct: 358 KMSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRNDV 417

Query: 416 AVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHR 475
           AVCAAD RLMAF+SVEDS RFWIKG+KFSI+GLLG ++  N+FL+G++VIFRLAPQDYHR
Sbjct: 418 AVCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNAFLDGSLVIFRLAPQDYHR 477

Query: 476 FHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVC 529
           FH+PVSG+IEQFVD+ G LYTVNPIAVNSKYCNVFTENKR V+IISTA FGKV 
Sbjct: 478 FHVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTVAIISTAEFGKVA 531

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478940|ref|XP_004155459.1| PREDICTED: LOW QUALITY PROTEIN: phosphatidylserine decarboxylase proenzyme 3-like [Cucumis sativus]

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/565 (69%), Positives = 452/565 (80%), Gaps = 37/565 (6%)

Query: 1   MGHGSSKEDESV------------SRTSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLN 48
           MG+G+SK D S             SR SRF+ + HL R  RR R   +      H ++ +
Sbjct: 1   MGNGTSKPDSSSYSSSSSDPDAEESRISRFKNRVHLRRFLRRRRKVTNGRAFRSHTKLGS 60

Query: 49  EEDFAGIALLTLISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGP 108
            EDFAGIA+LTLI A M FKD+WLACVS GEQT RT ISD+T +P WNSEKKLLLE +GP
Sbjct: 61  AEDFAGIAILTLIRARMDFKDRWLACVSFGEQTFRTGISDHTKEPAWNSEKKLLLEKDGP 120

Query: 109 HVARISVFE-----------------------DSDADSEVFDLLDPSSSNKIVGKISLSC 145
           H+ARISVFE                       +SD+D E  +LLDPS  N +VGKIS+SC
Sbjct: 121 HIARISVFETNRISRNNLVGFCEIDLLEFLSQESDSDIEELELLDPSPPNAVVGKISVSC 180

Query: 146 SVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNG 205
           SVEDPIETEK FA+RILSIVDYN+DG+LSF EFSDL+ AFGNQVAA+KKEELFKAADKNG
Sbjct: 181 SVEDPIETEKRFAKRILSIVDYNEDGELSFPEFSDLMDAFGNQVAASKKEELFKAADKNG 240

Query: 206 DGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTG 265
           DGVV++DELAALLA QQEKEPLMN CPVCGETLEV+D +N MIHLTLCFDEGTGNQVMTG
Sbjct: 241 DGVVTLDELAALLAAQQEKEPLMNRCPVCGETLEVSDKLNNMIHLTLCFDEGTGNQVMTG 300

Query: 266 GFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRA-HILV-FDRRTKRLVEELIDVKIVM 323
           GFLTDKQA+  WMFKLSEW HFSSYDVGLNSGS A HI+V      KRLVEE+ID KIV+
Sbjct: 301 GFLTDKQAAYGWMFKLSEWAHFSSYDVGLNSGSSASHIVVCLXSAEKRLVEEIIDGKIVL 360

Query: 324 SMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVK 383
           SMRAIYQSK+GL LMD G KELL SISEKQG++M+SVES+K+I  F+  FKDQIN+ +VK
Sbjct: 361 SMRAIYQSKVGLTLMDKGVKELLHSISEKQGKRMDSVESAKDISHFIESFKDQINMNEVK 420

Query: 384 YPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKF 443
           +PLE+FKTFNEFFIRELKPG RPI  +E ++VAVCAAD RLMAFKS++DSLR WIKG+KF
Sbjct: 421 HPLEYFKTFNEFFIRELKPGVRPIAHVECDDVAVCAADCRLMAFKSIDDSLRLWIKGRKF 480

Query: 444 SIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVN 503
           S+QGLLG DI +++F++GT+VIFRLAPQDYHRFH PVSG IEQ VDIPGCLYTVNPIAVN
Sbjct: 481 SVQGLLGQDISASAFMDGTLVIFRLAPQDYHRFHFPVSGFIEQIVDIPGCLYTVNPIAVN 540

Query: 504 SKYCNVFTENKRVVSIISTAHFGKV 528
           SKYCNVFTENKR V+IIST+ FGKV
Sbjct: 541 SKYCNVFTENKRSVAIISTSDFGKV 565

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	547
TAIR|locus:2120820	635	PSD3 "phosphatidylserine decar	0.751	0.647	0.732	1.1e-196
TAIR|locus:2175574	635	PSD2 "phosphatidylserine decar	0.755	0.650	0.742	1.5e-168
DICTYBASE|DDB_G0282337	563	DDB_G0282337 "putative phospha	0.409	0.397	0.412	8.7e-49
CGD|CAL0003011	1070	orf19.3954 [Candida albicans (	0.711	0.363	0.321	9.5e-49
UNIPROTKB|Q5AK66	1070	PSD2 "Putative uncharacterized	0.711	0.363	0.321	9.5e-49
ASPGD|ASPL0000035952	1053	AN3188 [Emericella nidulans (t	0.531	0.276	0.378	1e-48
POMBASE|SPAC31G5.15	967	psd3 "phosphatidylserine decar	0.533	0.301	0.375	8e-46
SGD|S000003402	1138	PSD2 "Phosphatidylserine decar	0.528	0.253	0.360	8.9e-39
ASPGD|ASPL0000009559	347	AN7989 [Emericella nidulans (t	0.319	0.504	0.406	2.5e-31
UNIPROTKB|Q9KV19	285	psd "Phosphatidylserine decarb	0.305	0.585	0.371	1.3e-23

TAIR|locus:2120820 PSD3 "phosphatidylserine decarboxylase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1606 (570.4 bits), Expect = 1.1e-196, Sum P(2) = 1.1e-196
 Identities = 304/415 (73%), Positives = 364/415 (87%)

Query:   115 VFEDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLS 174
             V ++ D+  + FDLLDP+SSN +VG + +SCSVEDP+ETE  FA+RILSIVDY++DG+LS
Sbjct:   138 VVQEPDSTCKSFDLLDPASSN-VVGSMFVSCSVEDPVETETCFAKRILSIVDYDEDGKLS 196

Query:   175 FKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDEXXXXXXXQQEKEPLMNCCPVC 234
             F EFSDL++AFGN VAANKKEELFKAAD NGDGVV++DE       QQE+EP++N CPVC
Sbjct:   197 FSEFSDLMNAFGNVVAANKKEELFKAADLNGDGVVTIDELAALLAVQQEQEPIINSCPVC 256

Query:   235 GETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGL 294
             GE L++ D +N MIH+TLCFDEGTGNQ MTGGFLTD+QAS  WMFKLSEW H S+YDVGL
Sbjct:   257 GEALQL-DKLNAMIHMTLCFDEGTGNQ-MTGGFLTDRQASYGWMFKLSEWTHLSTYDVGL 314

Query:   295 NSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQ 353
             N+GS A HI+V DR+TKRLVEELID KIVMSMRAIYQSKIGL LMD G KE+L+++SEKQ
Sbjct:   315 NTGSSASHIVVIDRKTKRLVEELIDSKIVMSMRAIYQSKIGLRLMDQGAKEILQNLSEKQ 374

Query:   354 GRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMERE 413
             G+KMNSVES++ IP F+ FFKDQIN+A+VKYPL+HFKTFNEFF+RELKPGARPI CM+++
Sbjct:   375 GKKMNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNEFFVRELKPGARPIACMDQD 434

Query:   414 EVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDY 473
             +VAV AAD RLMAF+SV+DS RFWIKG+KFSI+GLLGND+ S++FL+G++VIFRLAPQDY
Sbjct:   435 DVAVSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDVQSDAFLDGSLVIFRLAPQDY 494

Query:   474 HRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKV 528
             HRFH PVSG+IE+FV++ G LYTVNPIAVNSKYCNVFTENKR + IISTA FGKV
Sbjct:   495 HRFHSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENKRTIVIISTAEFGKV 549

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA;IGI;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008654 "phospholipid biosynthetic process" evidence=IEA;ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2175574 PSD2 "phosphatidylserine decarboxylase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1639 (582.0 bits), Expect = 1.5e-168, P = 1.5e-168
 Identities = 308/415 (74%), Positives = 366/415 (88%)

Query:   115 VFEDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLS 174
             V ++ ++  + F+LLDP+SSN +VG I LSC++EDP+ETE+ FA+RILSIVDYN+DGQLS
Sbjct:   137 VVQEPESTCKSFNLLDPTSSN-VVGSIFLSCAIEDPVETERRFAKRILSIVDYNEDGQLS 195

Query:   175 FKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDEXXXXXXXQQEKEPLMNCCPVC 234
             F EFSDLI AFGN VAANKKEELFKAAD NGDGVV++DE       QQE+EP++N CPVC
Sbjct:   196 FSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVC 255

Query:   235 GETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGL 294
             GE L+V+D +N MIH+TLCFDEGTGNQVMTGGFLTD+QAS  WMFKLSEW H S+YDVGL
Sbjct:   256 GEALQVSDKLNAMIHMTLCFDEGTGNQVMTGGFLTDRQASYGWMFKLSEWTHLSTYDVGL 315

Query:   295 NSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQ 353
             N+GS A +I+V DR++KRLVEELID KIV+SMRAIYQSKIGL LMD G KE+L+ +SEKQ
Sbjct:   316 NTGSSASYIVVIDRKSKRLVEELIDSKIVLSMRAIYQSKIGLRLMDQGAKEILQRLSEKQ 375

Query:   354 GRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMERE 413
             G+KM+SVES+++IP+F+ FFKDQIN+A+VKYPL+HFKTFNEFFIRELKPGARPI CM R 
Sbjct:   376 GKKMSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRN 435

Query:   414 EVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDY 473
             +VAVCAAD RLMAF+SVEDS RFWIKG+KFSI+GLLG ++  N+FL+G++VIFRLAPQDY
Sbjct:   436 DVAVCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNAFLDGSLVIFRLAPQDY 495

Query:   474 HRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKV 528
             HRFH+PVSG+IEQFVD+ G LYTVNPIAVNSKYCNVFTENKR V+IISTA FGKV
Sbjct:   496 HRFHVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTVAIISTAEFGKV 550

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA;ISS;IMP;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008654 "phospholipid biosynthetic process" evidence=IEA;ISS

GO:0009705 "plant-type vacuole membrane" evidence=IDA

DICTYBASE|DDB_G0282337 DDB_G0282337 "putative phosphatidylserine decarboxylase" [Dictyostelium discoideum (taxid:44689)]

 Score = 445 (161.7 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
 Identities = 94/228 (41%), Positives = 143/228 (62%)

Query:   302 ILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIG-TKELLKSISEKQGRKMNSV 360
             I + DR + +LVEE I   I +S+R +Y +  G   ++    K L++ ++ K G+K  + 
Sbjct:   262 IYIHDRESGKLVEEKIPHYIEVSLRIMYSTSGGRSAINNSQVKRLMRYLTNKTGKKYEAP 321

Query:   361 ESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAA 420
             ES KEI  F+ F    +N+ ++  PL  FK FN+FF R+LK  ARPI      ++AV  A
Sbjct:   322 ESVKEIQPFIKFHS--LNVDEILDPLSSFKNFNQFFYRKLKDSARPIASPNDPKIAVSPA 379

Query:   421 DSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPV 480
             D RL  F +++ +   WIKG+ F++  L+ ++  ++ + +G++VI RLAPQDYHRFH+PV
Sbjct:   380 DCRLNVFPTIKLATELWIKGKNFTLTTLIQDEQLASQYEDGSLVIARLAPQDYHRFHVPV 439

Query:   481 SGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKV 528
             SG+I +   I G LYTVNPIA+     +V+ ENKR+V+ I +  FGKV
Sbjct:   440 SGVIGKSTPIDGELYTVNPIAIRENV-DVYCENKRIVTEIDSKEFGKV 486

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

CGD|CAL0003011 orf19.3954 [Candida albicans (taxid:5476)]

 Score = 478 (173.3 bits), Expect = 9.5e-49, Sum P(3) = 9.5e-49
 Identities = 135/420 (32%), Positives = 211/420 (50%)

Query:   128 LLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN 187
             L D     K   K+ +    E   E  K F R +L   +   + + S  ++ +LIS    
Sbjct:   512 LHDQKYIGKYAPKLKIRVRFETYTELRKKFWRVLLEESNSTPENRDSC-DYIELISLLDT 570

Query:   188 QVAANKKE--ELFKA-ADKNG--------DGVVSVDEXXXXXXXQQEKEPLMNC--CPVC 234
                 N  E  ELF +   K+         D ++   E       +  K  +     CP+C
Sbjct:   571 LGCVNSDELVELFYSNLGKSSWGGDLLTFDEIIDQMETYVNQNVESGKVKIFEFEKCPIC 630

Query:   235 GET-LEVADMVNTMIHLTLCF--DEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYD 291
              E  +     ++ + H  +C   D    +++++  ++T  QA+  W  K      +  Y 
Sbjct:   631 NEKRVSKKQDLDIITHFAICASKDWSVVSKLLSSSYVTPTQATKKWFTKALIKLTYGKYK 690

Query:   292 VGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKE---LLKS 348
             +G NS   A+ILV DR T  +VEE + V + + +R +Y+     GL    +K    LLK+
Sbjct:   691 LGGNS---ANILVQDRMTGIIVEEKMSVYVRLGIRLLYK-----GLDKARSKRVRILLKN 742

Query:   349 ISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPID 408
             +S KQG+K ++ +S  +I  F+ F K  ++  ++  P + F TFN+FF R+LKPGAR I+
Sbjct:   743 MSIKQGKKFDAPQSKSDIASFIKFHKLDLDECEIDDPSQ-FATFNDFFYRKLKPGAREIE 801

Query:   409 CMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRL 468
               +  ++    AD R + F+S++ + + WIKG  F+I  L+ ND  S    + T+ IFRL
Sbjct:   802 DEKNSKIVTSPADCRSVVFESIDKATQLWIKGAGFTIPKLIHNDH-SMRVSSYTLGIFRL 860

Query:   469 APQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKV 528
             APQDYHRFH PV G+IE    I G  YTVNP+A+ S+  +VF EN R +  I T  FG +
Sbjct:   861 APQDYHRFHSPVDGVIESIKHIDGEYYTVNPMAIRSEL-DVFGENVRTIVTIKTKDFGNI 919

GO:0005768 "endosome" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0032153 "cell division site" evidence=IEA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=IEA

GO:0071775 "regulation of cell cycle cytokinesis" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=IEA

GO:0036180 "filamentous growth of a population of unicellular organisms in response to biotic stimulus" evidence=IMP

GO:0036170 "filamentous growth of a population of unicellular organisms in response to starvation" evidence=IMP

GO:0036171 "filamentous growth of a population of unicellular organisms in response to chemical stimulus" evidence=IMP

UNIPROTKB|Q5AK66 PSD2 "Putative uncharacterized protein PSD2" [Candida albicans SC5314 (taxid:237561)]

 Score = 478 (173.3 bits), Expect = 9.5e-49, Sum P(3) = 9.5e-49
 Identities = 135/420 (32%), Positives = 211/420 (50%)

Query:   128 LLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN 187
             L D     K   K+ +    E   E  K F R +L   +   + + S  ++ +LIS    
Sbjct:   512 LHDQKYIGKYAPKLKIRVRFETYTELRKKFWRVLLEESNSTPENRDSC-DYIELISLLDT 570

Query:   188 QVAANKKE--ELFKA-ADKNG--------DGVVSVDEXXXXXXXQQEKEPLMNC--CPVC 234
                 N  E  ELF +   K+         D ++   E       +  K  +     CP+C
Sbjct:   571 LGCVNSDELVELFYSNLGKSSWGGDLLTFDEIIDQMETYVNQNVESGKVKIFEFEKCPIC 630

Query:   235 GET-LEVADMVNTMIHLTLCF--DEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYD 291
              E  +     ++ + H  +C   D    +++++  ++T  QA+  W  K      +  Y 
Sbjct:   631 NEKRVSKKQDLDIITHFAICASKDWSVVSKLLSSSYVTPTQATKKWFTKALIKLTYGKYK 690

Query:   292 VGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKE---LLKS 348
             +G NS   A+ILV DR T  +VEE + V + + +R +Y+     GL    +K    LLK+
Sbjct:   691 LGGNS---ANILVQDRMTGIIVEEKMSVYVRLGIRLLYK-----GLDKARSKRVRILLKN 742

Query:   349 ISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPID 408
             +S KQG+K ++ +S  +I  F+ F K  ++  ++  P + F TFN+FF R+LKPGAR I+
Sbjct:   743 MSIKQGKKFDAPQSKSDIASFIKFHKLDLDECEIDDPSQ-FATFNDFFYRKLKPGAREIE 801

Query:   409 CMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRL 468
               +  ++    AD R + F+S++ + + WIKG  F+I  L+ ND  S    + T+ IFRL
Sbjct:   802 DEKNSKIVTSPADCRSVVFESIDKATQLWIKGAGFTIPKLIHNDH-SMRVSSYTLGIFRL 860

Query:   469 APQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKV 528
             APQDYHRFH PV G+IE    I G  YTVNP+A+ S+  +VF EN R +  I T  FG +
Sbjct:   861 APQDYHRFHSPVDGVIESIKHIDGEYYTVNPMAIRSEL-DVFGENVRTIVTIKTKDFGNI 919

GO:0036170 "filamentous growth of a population of unicellular organisms in response to starvation" evidence=IMP

GO:0036171 "filamentous growth of a population of unicellular organisms in response to chemical stimulus" evidence=IMP

GO:0036180 "filamentous growth of a population of unicellular organisms in response to biotic stimulus" evidence=IMP

ASPGD|ASPL0000035952 AN3188 [Emericella nidulans (taxid:162425)]

 Score = 502 (181.8 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
 Identities = 115/304 (37%), Positives = 172/304 (56%)

Query:   231 CPVCGET-LEVADMVNTMIHLTLCFDEG---TGNQVMTGGFLTDKQASNVWMFKLSEWGH 286
             CP+C +  L      + + H+  C  +      N VM GGF+T  QA   W  K+     
Sbjct:   639 CPLCHQPRLSKRSDADIITHIATCASQDWRQVDNLVM-GGFVTSSQAQRKWYSKVITKIS 697

Query:   287 FSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELL 346
             +  Y +G NS   A+ILV DR T ++ EE + V + + +R +Y+      +     +++L
Sbjct:   698 YGGYKLGANS---ANILVQDRITGQINEERMSVYVRLGIRLLYKGLKSREMEKKRIRKIL 754

Query:   347 KSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARP 406
             KS+S KQG+K +   S+ +I  F+NF   Q+++++V  PL+ FK FNEFF R LKPGARP
Sbjct:   755 KSLSIKQGKKYDDPASASQIRDFINFH--QLDMSEVLLPLDQFKNFNEFFYRALKPGARP 812

Query:   407 IDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSN--SFLNGTMV 464
                     + V  AD R + F  V ++   W+KG++FSI+ LLGN    +   + NG + 
Sbjct:   813 CSAPHEPGIVVSPADCRTVVFDRVTEATSVWVKGREFSIKRLLGNAYPEDVSRYQNGALG 872

Query:   465 IFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAH 524
             +FRLAPQDYHRFH+PV G++     I G  YTVNP+A+ S   +V+ EN RV+  I +  
Sbjct:   873 VFRLAPQDYHRFHIPVDGVMGTPKTIEGEYYTVNPMAIRSAL-DVYGENVRVLVPIDSVR 931

Query:   525 FGKV 528
              G+V
Sbjct:   932 HGRV 935

GO:0006644 "phospholipid metabolic process" evidence=RCA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA;RCA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0032153 "cell division site" evidence=IEA

POMBASE|SPAC31G5.15 psd3 "phosphatidylserine decarboxylase Psd3" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 490 (177.5 bits), Expect = 8.0e-46, P = 8.0e-46
 Identities = 113/301 (37%), Positives = 173/301 (57%)

Query:   231 CPVCGE-TLEVADMVNTMIHLTLC--FDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHF 287
             CP+C +  L   +     +HL  C   D    +++M   +++  QA   W  K      +
Sbjct:   581 CPLCLKFKLSKVNQQKATVHLATCASHDWKRVDRLMMTSYVSLNQAQRRWFSKAFAKVVY 640

Query:   288 SSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLK 347
              S  VG  S   A  LV +R+T ++ EE ++  + + +R +Y+      +     K++L+
Sbjct:   641 GSSKVGSTS---ATTLVQNRQTGQIQEEKMNAYVRIGIRLLYRGIRNRRIEGSKVKKILR 697

Query:   348 SISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPI 407
             S++ KQG K +S  S KEI  F+ FF   +N+ +V  P+  FKTFNEFF R+LKPG+RP 
Sbjct:   698 SLTLKQGMKYDSPISVKEIKPFIRFF--DLNMNEVDMPVGGFKTFNEFFYRKLKPGSRPC 755

Query:   408 DCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFR 467
                +  ++ V  ADSR++A++ +E +  +WIKG +F+++ LLG    +  F+ G++ I R
Sbjct:   756 AFPDNPDILVSPADSRIVAYECIEKATTYWIKGTEFTVERLLGYSNEAQRFVGGSICISR 815

Query:   468 LAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGK 527
             LAPQDYHRFH PV+G I     I G  YTVNP+A+ S Y +VF EN RV+  I +  FGK
Sbjct:   816 LAPQDYHRFHSPVNGCIGPITKIEGQYYTVNPMAIRS-YLDVFGENVRVLIPIDSNEFGK 874

Query:   528 V 528
             V
Sbjct:   875 V 875

GO:0000139 "Golgi membrane" evidence=ISS

GO:0000329 "fungal-type vacuole membrane" evidence=ISS

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IGI;ISS

GO:0005543 "phospholipid binding" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IGI

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=ISS

GO:0032153 "cell division site" evidence=IDA

SGD|S000003402 PSD2 "Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 426 (155.0 bits), Expect = 8.9e-39, P = 8.9e-39
 Identities = 111/308 (36%), Positives = 172/308 (55%)

Query:   227 LMNCCPVCGETLEVADMVNTMI-HLTLC-FDEGTGNQVMTGGFLTDKQASNVWMFKLSEW 284
             + +C P          + N +I H  +C F +   ++ +   +++   AS  W  K+   
Sbjct:   716 MRSCKPTRNARRSKLVLENDLITHFAICTFSKE--HKTLKPSYVSSAFASKRWFSKVLIK 773

Query:   285 GHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKE 344
               +  Y +G N+   A+ILV DR T  ++EE I   + + MR IY  K          + 
Sbjct:   774 LTYGKYALGSNN---ANILVQDRDTGIIIEEKISAHVKLGMRIIYNGKSPESKK---FRS 827

Query:   345 LLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGA 404
             LLK++S +QG+K +S  S+K+I  F+ F    ++L+  +   + FKTFNEFF R+LKPG+
Sbjct:   828 LLKTLSIRQGKKFDSTASAKQIEPFIKFHS--LDLSQCRD--KDFKTFNEFFYRKLKPGS 883

Query:   405 RPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFL--NGT 462
             R +     +E+    ADSR   F ++++S   W+KG+KFSI+ L  N+    +F   N +
Sbjct:   884 R-LPESNNKEILFSPADSRCTVFPTIQESKEIWVKGRKFSIKKL-ANNYNPETFNDNNCS 941

Query:   463 MVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIIST 522
             + IFRLAPQDYHRFH P +G I + V + G  YTVNP+AV S+  +VF EN RV+  I +
Sbjct:   942 IGIFRLAPQDYHRFHSPCNGTIGKPVYVDGEYYTVNPMAVRSEL-DVFGENIRVIIPIDS 1000

Query:   523 AHFGKVCH 530
               FGK+ +
Sbjct:  1001 PQFGKLLY 1008

GO:0016829 "lyase activity" evidence=IEA

GO:0005773 "vacuole" evidence=IEA

GO:0005768 "endosome" evidence=IDA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=IEA;IGI

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=IDA

GO:0016831 "carboxy-lyase activity" evidence=IEA

ASPGD|ASPL0000009559 AN7989 [Emericella nidulans (taxid:162425)]

 Score = 345 (126.5 bits), Expect = 2.5e-31, P = 2.5e-31
 Identities = 72/177 (40%), Positives = 108/177 (61%)

Query:   352 KQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCME 411
             K+G++  +  S+K I +F++FF   ++  +   P   F++F EFF+R  KPG RPI   E
Sbjct:    78 KEGKQEAAPASAKRIREFISFFHINMDEFEPSDPAA-FRSFEEFFVRHHKPGTRPIFEAE 136

Query:   412 REEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQ 471
                 AVC ADSR++ ++ V +S + WIKG+ FSI  L+ +      F +G +  FRL+PQ
Sbjct:   137 NPSSAVCVADSRVVVYEHVAESKKIWIKGEDFSITNLVMDRKLGPQFGDGPVASFRLSPQ 196

Query:   472 DYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKV 528
             DYHR+H PVSG I+ F  +PG  Y V+P+A+ S   ++ T N R   +I T  FG+V
Sbjct:   197 DYHRYHSPVSGKIKVFRSMPGDYYEVDPLAIRSGV-DILTRNARDYVVIETEEFGEV 252

GO:0006644 "phospholipid metabolic process" evidence=RCA

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=RCA

GO:0005575 "cellular_component" evidence=ND

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

UNIPROTKB|Q9KV19 psd "Phosphatidylserine decarboxylase proenzyme" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 277 (102.6 bits), Expect = 1.3e-23, P = 1.3e-23
 Identities = 65/175 (37%), Positives = 94/175 (53%)

Query:   356 KMNSVESSKEIPKFVNFFKDQ--INLADVKYP-LEHFKTFNEFFIRELKPGARPIDCMER 412
             K+ S  +       + +F  Q  +N+ +  +    HFKTFNEFF+RELK G RPI   E 
Sbjct:    23 KLASARAGSLTTAIIRWFIKQYNVNMDEALHSDPTHFKTFNEFFVRELKAGVRPI--AEG 80

Query:   413 EEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDI-CSNSFLNGTMVIFRLAPQ 471
             E+V    AD+ +  F ++E       KG  +S Q LLG D   +  F +G      L+P+
Sbjct:    81 EKVITHPADACVSQFGAIEYGKLIQAKGHTYSAQELLGGDAKLAEEFRDGDFATLYLSPR 140

Query:   472 DYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFG 526
             DYHR H+P  G + Q + +PG L++VNP+   +   N+F  N+RVV I  T  FG
Sbjct:   141 DYHRVHMPCDGTLRQMIYVPGDLFSVNPLTAEN-VPNLFARNERVVCIFDT-EFG 193

GO:0004609 "phosphatidylserine decarboxylase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.1.1.65	LOW CONFIDENCE prediction!
3rd Layer	4.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	547
PLN02964	644	PLN02964, PLN02964, phosphatidylserine decarboxyla	0.0
PRK00723	297	PRK00723, PRK00723, phosphatidylserine decarboxyla	1e-57
pfam02666	201	pfam02666, PS_Dcarbxylase, Phosphatidylserine deca	2e-43
COG0688	239	COG0688, Psd, Phosphatidylserine decarboxylase [Li	2e-35
PRK00044	288	PRK00044, psd, phosphatidylserine decarboxylase; R	3e-33
PRK03140	259	PRK03140, PRK03140, phosphatidylserine decarboxyla	5e-27
TIGR00163	238	TIGR00163, PS_decarb, phosphatidylserine decarboxy	8e-26
PRK03934	265	PRK03934, PRK03934, phosphatidylserine decarboxyla	5e-23
PRK09629	610	PRK09629, PRK09629, bifunctional thiosulfate sulfu	3e-17
PTZ00403	353	PTZ00403, PTZ00403, phosphatidylserine decarboxyla	2e-13
PLN02938	428	PLN02938, PLN02938, phosphatidylserine decarboxyla	6e-10
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	2e-09
pfam13833	53	pfam13833, EF_hand_6, EF-hand domain pair	2e-06
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	8e-06
pfam13202	25	pfam13202, EF_hand_3, EF hand	6e-04

>gnl|CDD|215520 PLN02964, PLN02964, phosphatidylserine decarboxylase

 Score =  948 bits (2451), Expect = 0.0
 Identities = 396/553 (71%), Positives = 460/553 (83%), Gaps = 26/553 (4%)

Query: 1   MGHGSSKEDESVSRTSRFRKKFHLHRERRRSRGNGSNSGSHH-HNRVLNEEDFAGIALLT 59
           MG+G+S+E +  SR S+ R+K    R RRR       S S     R ++ EDF+GIALLT
Sbjct: 1   MGNGNSREAKE-SRRSKLRQKLQKFRIRRRHLRCSRGSSSGSVSQRAVSAEDFSGIALLT 59

Query: 60  LISAEMKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFE-- 117
           L+ AEMKFKDKWLACVS GEQT RT  SD+TDKP+WNSEKKLLLE NGPH+ARISVFE  
Sbjct: 60  LVGAEMKFKDKWLACVSFGEQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARISVFETN 119

Query: 118 ---------------------DSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKS 156
                                + ++  E FDLLDPSSSNK+VG I +SCS+EDP+ETE+S
Sbjct: 120 RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSSNKVVGSIFVSCSIEDPVETERS 179

Query: 157 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAA 216
           FARRIL+IVDY++DGQLSF EFSDLI AFGN VAANKKEELFKAAD NGDGVV++DELAA
Sbjct: 180 FARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAA 239

Query: 217 LLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNV 276
           LLALQQE+EP++N CPVCGE L V+D +N MIH+TLCFDEGTGNQVMTGGFLTDKQAS  
Sbjct: 240 LLALQQEQEPIINNCPVCGEALGVSDKLNAMIHMTLCFDEGTGNQVMTGGFLTDKQASYG 299

Query: 277 WMFKLSEWGHFSSYDVGLNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGL 335
           WMFKLSEW H S+YDVGLN+GS A HILVFDR++KRLVEELID KIV+SMRAIYQSKIGL
Sbjct: 300 WMFKLSEWAHLSTYDVGLNTGSSASHILVFDRKSKRLVEELIDSKIVLSMRAIYQSKIGL 359

Query: 336 GLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEF 395
            LMD G KE+L+ +SEKQG+KMNSVES+++IPKF+ FFKDQIN+ +VKYPLEHFKTFNEF
Sbjct: 360 RLMDQGAKEILQRLSEKQGKKMNSVESAQDIPKFLEFFKDQINMDEVKYPLEHFKTFNEF 419

Query: 396 FIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICS 455
           FIRELKPGARPI CM+ ++VAVCAAD RLMAF+SV+DS RFWIKG+KFSI+GLLG  + S
Sbjct: 420 FIRELKPGARPIACMDNDDVAVCAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGKKVHS 479

Query: 456 NSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKR 515
           ++FL+G++VIFRLAPQDYHRFH+PVSG+IE+FVD+PG LYTVNPIAVNSKYCNVFTENKR
Sbjct: 480 DAFLDGSLVIFRLAPQDYHRFHVPVSGVIEKFVDVPGSLYTVNPIAVNSKYCNVFTENKR 539

Query: 516 VVSIISTAHFGKV 528
            V IISTA FGKV
Sbjct: 540 AVCIISTAEFGKV 552

Length = 644

>gnl|CDD|179097 PRK00723, PRK00723, phosphatidylserine decarboxylase; Provisional

 Score =  193 bits (494), Expect = 1e-57
 Identities = 87/229 (37%), Positives = 137/229 (59%), Gaps = 9/229 (3%)

Query: 302 ILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVE 361
           I  ++R+TK+   E +  +  +    +Y S IG  L+++  K+  K  S+  G   +S  
Sbjct: 2   IKYYNRKTKKYEIEKVAGEKYLKW--LYSSPIGKNLLELLIKK--KIFSKIYGWYCDSRL 57

Query: 362 SSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAAD 421
           S K+I  FVN F   I++++ + PL  FK+FN+FF R+LKP ARPID  + E + +   D
Sbjct: 58  SRKKIKPFVNDF--NIDMSESEKPLSDFKSFNDFFTRKLKPEARPID--QGENILISPGD 113

Query: 422 SRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVS 481
            RL+A+++++ +  F +KG+ +S++ LLG+   +  +  GT +I RL P DYHRFH P S
Sbjct: 114 GRLLAYENIDLNSLFQVKGKTYSLKELLGDPELAKKYAGGTCLILRLCPTDYHRFHFPDS 173

Query: 482 GIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCH 530
           GI E+   I G  Y+VNPIA+  K   +F ENKR  SI  + +FG + +
Sbjct: 174 GICEETRKIKGHYYSVNPIALK-KIFELFCENKREWSIFKSENFGDILY 221

Length = 297

>gnl|CDD|217173 pfam02666, PS_Dcarbxylase, Phosphatidylserine decarboxylase

 Score =  152 bits (387), Expect = 2e-43
 Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 5/139 (3%)

Query: 392 FNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGN 451
            N+FF R L+  ARPI     ++V V  AD R+ A   + +     +KG  +S++ LLG+
Sbjct: 1   LNDFFTRFLRDPARPIPT--DDDVVVSPADGRVTAIGEISEDSVIQVKGVTYSLEELLGD 58

Query: 452 DI-CSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVF 510
               +  F  GT ++  L+P DYHR H PV G +++   IPG LY VNP+A+ SK  N+F
Sbjct: 59  PSELAKKFKGGTFIVIYLSPFDYHRNHAPVDGTVKEVRHIPGKLYPVNPLAL-SKIPNLF 117

Query: 511 TENKRVVSIISTAHFGKVC 529
           +EN+RVV +I T  FGKV 
Sbjct: 118 SENERVVIVIETK-FGKVA 135

This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyze the reaction: Phosphatidyl-L-serine <=> phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine. Length = 201

>gnl|CDD|223760 COG0688, Psd, Phosphatidylserine decarboxylase [Lipid metabolism]

 Score =  132 bits (334), Expect = 2e-35
 Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 24/174 (13%)

Query: 353 QGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMER 412
            G +  S    +EI  F+  F   +++++ + PLE + + NEFF R LK   RPID    
Sbjct: 19  AGVRSPSPIIKREIYPFIAAFL--VDMSEAEKPLEPYASLNEFFTRFLKYFFRPID---- 72

Query: 413 EEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNS-FLNGTMVIFRLAPQ 471
            E    A D R++              G+ +S++ LLG D        +GT V   L+P 
Sbjct: 73  PERVSPA-DGRIVVSP---------ADGRVYSVEELLGPDDELAYGDRDGTRVSIFLSPF 122

Query: 472 DYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHF 525
           DYHR H PV G I +   +PG  ++ N           FTEN+R   +I T   
Sbjct: 123 DYHRNHAPVDGTIIEVRYVPGKFFSANLDK-------AFTENERNSVLIETEQG 169

Length = 239

>gnl|CDD|234591 PRK00044, psd, phosphatidylserine decarboxylase; Reviewed

 Score =  128 bits (323), Expect = 3e-33
 Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 17/173 (9%)

Query: 363 SKEIPKFVNFF------KDQINLADVKYP-LEHFKTFNEFFIRELKPGARPIDCMEREEV 415
           S                K ++++++ + P    +KTFN+FF R LK GARPID  E    
Sbjct: 27  SSRAGWLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRALKDGARPID--EDPNA 84

Query: 416 AVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGND-ICSNSFLNGTMVIFRLAPQDYH 474
            V  AD  +     +ED   F  KG  +S++ LLG D   ++ F NG+     L+P+DYH
Sbjct: 85  LVSPADGAISQLGPIEDGQIFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYH 144

Query: 475 RFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNV---FTENKRVVSIISTAH 524
           R H+P  G + + + +PG L++VNP+       NV   F  N+RVV +  T  
Sbjct: 145 RVHMPCDGTLREMIYVPGDLFSVNPLTAR----NVPNLFARNERVVCLFDTEF 193

Length = 288

>gnl|CDD|179544 PRK03140, PRK03140, phosphatidylserine decarboxylase; Provisional

 Score =  109 bits (275), Expect = 5e-27
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 13/168 (7%)

Query: 362 SSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAAD 421
           SS  IP +   +  QIN  +++  L+ ++T +E F R+LK G RPID        V   D
Sbjct: 31  SSILIPSYAKVY--QINQDEMEKGLKEYRTLHELFTRKLKEGKRPID--TDASSIVSPVD 86

Query: 422 SRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVS 481
                   +ED   F +KG+++SI  +LGN+  +  +  GT ++  L+P  YHR H P+S
Sbjct: 87  GVFADVGPIEDDKTFDVKGKRYSIAEMLGNEERAQRYAGGTYMVLYLSPSHYHRIHSPIS 146

Query: 482 GII-EQF--------VDIPGCLYTVNPIAVNSKYCNVFTENKRVVSII 520
           G + EQF        V+  G  Y   P++ N +       +   ++++
Sbjct: 147 GTVTEQFVLGRKSYPVNALGLEYGKRPLSKNYRSVTEVNSDGEHMALV 194

Length = 259

>gnl|CDD|232850 TIGR00163, PS_decarb, phosphatidylserine decarboxylase precursor

 Score =  105 bits (264), Expect = 8e-26
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 7/143 (4%)

Query: 383 KYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCA-ADSRLMAFKSVEDSLRFWIKGQ 441
           K  L  +++ NEFFIR LK   RP+D   +E  A+ + AD  +     +  +    +KG 
Sbjct: 6   KPDLADYRSLNEFFIRPLKLERRPVD---KEPNALVSPADGVISEVGIINPNQILQVKGM 62

Query: 442 KFSIQGLLG-NDICSNSFLNGTM-VIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNP 499
            +S++ LLG  +  S  F NG   V+  L+P+DYHRFH P    + +    PG L++VNP
Sbjct: 63  DYSLEELLGEKNPLSPYFRNGGFFVVTYLSPRDYHRFHSPCDCRLRKMRYFPGDLFSVNP 122

Query: 500 IAVNSKYCNVFTENKRVVSIIST 522
           + +     N+F  N+RV+ +  T
Sbjct: 123 LGLQ-NVPNLFVRNERVILVFDT 144

Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein. A closely related family, possibly also active as phosphatidylserine decarboxylase, falls under model TIGR00164 [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 238

>gnl|CDD|235177 PRK03934, PRK03934, phosphatidylserine decarboxylase; Provisional

 Score = 98.5 bits (246), Expect = 5e-23
 Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 17/165 (10%)

Query: 362 SSKEIPKF---------VNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMER 412
           +  + PKF         V  FK  I++++ K P E++K+ N  F R LK   R  D  E 
Sbjct: 15  AGYKFPKFIQKFINASYVKIFK--IDMSEFK-PPENYKSLNALFTRSLKK-PREFD--ED 68

Query: 413 EEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQD 472
             + +   DS +    S+E+     IKG ++SI+ LLG +  S        + F L+P+D
Sbjct: 69  PNIFISPCDSLITECGSLEEDKALQIKGMEYSIEELLG-ESNSELVNGFDYINFYLSPKD 127

Query: 473 YHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVV 517
           YHR+H P    I +   IPG LY VN  ++  K  N+F +N+RVV
Sbjct: 128 YHRYHAPCDLEILEARYIPGKLYPVNLPSLE-KNKNLFVKNERVV 171

Length = 265

>gnl|CDD|104071 PRK09629, PRK09629, bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

 Score = 84.4 bits (208), Expect = 3e-17
 Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 386 LEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSI 445
           L  ++ FN FF R LK  ARP+D        +  AD  +     ++    F  KG  FS+
Sbjct: 380 LTSYEHFNAFFTRALKADARPLDTTP--GAILSPADGAISQLGPIDHGRIFQAKGHSFSV 437

Query: 446 QGLLGND-ICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNS 504
             LLG D   S  F+ G      L+P+DYHR H+P++G + + V +PG +++VN     +
Sbjct: 438 LELLGGDPKLSAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYVPGRIFSVNQTTAEN 497

Query: 505 KYCNVFTENKRVVSIIST 522
               +F  N+RVV +  T
Sbjct: 498 -VPELFARNERVVCLFDT 514

Length = 610

>gnl|CDD|173594 PTZ00403, PTZ00403, phosphatidylserine decarboxylase; Provisional

 Score = 71.0 bits (174), Expect = 2e-13
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 377 INLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRF 436
           IN  ++KYP+E +K+  +FF R ++   RPI  +    + V   DS L  +  +      
Sbjct: 95  INKEEIKYPIESYKSIGDFFSRYIREETRPIGDVSDYSI-VSPCDSELTDYGELSSEYLE 153

Query: 437 WIKGQKFSIQGLLGNDIC------SNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDI 490
            +KG KF++   LG+D+       S  F      IF L+P+ YH FH P +   +    I
Sbjct: 154 NVKGVKFNVNTFLGSDMQKKYNDGSTKFF---YAIFYLSPKKYHHFHAPFNFKYKIRRHI 210

Query: 491 PGCLYTVNPIAVNSKYCNVFTENKRVV 517
            G L+ V    +     N+F  N+RV+
Sbjct: 211 SGELFPVFQ-GMFKIINNLFNINERVI 236

Length = 353

>gnl|CDD|178526 PLN02938, PLN02938, phosphatidylserine decarboxylase

 Score = 61.0 bits (148), Expect = 6e-10
 Identities = 53/186 (28%), Positives = 71/186 (38%), Gaps = 54/186 (29%)

Query: 378 NLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDS--LR 435
           NL +   PLE + +  EFF+R LK GARPID        V   D  ++ F  ++    + 
Sbjct: 130 NLEEAALPLEEYASLREFFVRSLKEGARPID--PDPNCLVSPVDGIVLRFGELKGPGTMI 187

Query: 436 FWIKGQKFSIQGLLGNDICSNSFLNGTM-------------------------------- 463
             +KG  +S+  LLG     NS L  T                                 
Sbjct: 188 EQVKGFSYSVSALLGA----NSLLPMTAEGKEEKEEETLKDKSSKSWLRVSLASPKLRDP 243

Query: 464 ------------VIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFT 511
                       VI+ L P DYHR H P    IE      G L+ VN  A  +   N++ 
Sbjct: 244 VSASPMKGLFYCVIY-LGPGDYHRIHSPSDWNIEVRRHFSGRLFPVNERATRTIR-NLYV 301

Query: 512 ENKRVV 517
           EN+RVV
Sbjct: 302 ENERVV 307

Length = 428

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAAL 217
            R    + D + DG +S  E    + + G  ++  + +E+ +  DK+GDG +  +E   L
Sbjct: 2   LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLEL 61

Query: 218 LA 219
           +A
Sbjct: 62  MA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 13/53 (24%), Positives = 27/53 (50%)

Query: 169 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ 221
           + G ++ +E    ++  G  ++  + + LF+  D +GDG +S +E   LL   
Sbjct: 1   EKGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQRL 53

Length = 53

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 43.1 bits (102), Expect = 8e-06
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 166 DYNQDGQLSFKEFSDLISAFGNQVAANKKEE----LFKAADKNGDGVVSVDELAALL 218
           D + DG +  +E   L+ A G ++   + EE     F   DK+GDG +S +E    +
Sbjct: 4   DKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|205383 pfam13202, EF_hand_3, EF hand

 Score = 36.9 bits (87), Expect = 6e-04
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 195 EELFKAADKNGDGVVSVDELAALL 218
           ++LF+  D NGDG +S +EL  LL
Sbjct: 2   KDLFRQFDTNGDGKISKEELKRLL 25

Length = 25

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	547
PLN02964	644	phosphatidylserine decarboxylase	100.0
KOG2419	975	consensus Phosphatidylserine decarboxylase [Lipid	100.0
PRK00723	297	phosphatidylserine decarboxylase; Provisional	100.0
PRK03140	259	phosphatidylserine decarboxylase; Provisional	100.0
PTZ00403	353	phosphatidylserine decarboxylase; Provisional	100.0
PLN02938	428	phosphatidylserine decarboxylase	100.0
PRK00044	288	psd phosphatidylserine decarboxylase; Reviewed	100.0
PRK03934	265	phosphatidylserine decarboxylase; Provisional	100.0
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	100.0
TIGR00163	238	PS_decarb phosphatidylserine decarboxylase precurs	100.0
PF02666	202	PS_Dcarbxylase: Phosphatidylserine decarboxylase;	100.0
KOG2420	382	consensus Phosphatidylserine decarboxylase [Lipid	100.0
COG0688	239	Psd Phosphatidylserine decarboxylase [Lipid metabo	100.0
TIGR00164	189	PS_decarb_rel phosphatidylserine decarboxylase pre	99.89
PRK05305	206	phosphatidylserine decarboxylase; Provisional	99.86
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.51
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.46
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.34
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.28
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.24
PTZ00183	158	centrin; Provisional	99.11
PTZ00183	158	centrin; Provisional	99.06
PTZ00184	149	calmodulin; Provisional	99.04
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.0
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.98
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	98.97
PTZ00184	149	calmodulin; Provisional	98.96
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	98.91
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	98.89
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	98.88
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	98.79
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	98.74
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	98.71
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	98.67
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.66
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.65
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	98.63
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.61
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.59
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.59
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	98.56
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.56
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.56
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.55
KOG1030	168	consensus Predicted Ca2+-dependent phospholipid-bi	98.5
cd04016	121	C2_Tollip C2 domain present in Toll-interacting pr	98.5
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	98.49
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.43
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	98.38
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.35
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	98.35
cd04039	108	C2_PSD C2 domain present in Phosphatidylserine dec	98.33
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	98.31
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	98.3
cd08375	136	C2_Intersectin C2 domain present in Intersectin. A	98.29
cd04032	127	C2_Perforin C2 domain of Perforin. Perforin contai	98.28
cd08379	126	C2D_MCTP_PRT_plant C2 domain fourth repeat found i	98.13
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	98.08
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	98.07
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	98.07
PF14658	66	EF-hand_9: EF-hand domain	98.05
cd08391	121	C2A_C2C_Synaptotagmin_like C2 domain first and thi	98.01
cd04038	145	C2_ArfGAP C2 domain present in Arf GTPase Activati	97.99
cd04050	105	C2B_Synaptotagmin-like C2 domain second repeat pre	97.99
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	97.98
cd04024	128	C2A_Synaptotagmin-like C2 domain first repeat pres	97.98
KOG0038	189	consensus Ca2+-binding kinase interacting protein	97.98
cd08682	126	C2_Rab11-FIP_classI C2 domain found in Rab11-famil	97.97
cd04041	111	C2A_fungal C2 domain first repeat; fungal group. C	97.97
KOG0046	627	consensus Ca2+-binding actin-bundling protein (fim	97.96
cd08681	118	C2_fungal_Inn1p-like C2 domain found in fungal Ing	97.95
KOG0041	244	consensus Predicted Ca2+-binding protein, EF-Hand	97.95
cd04046	126	C2_Calpain C2 domain present in Calpain proteins.	97.88
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	97.88
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	97.87
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	97.85
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	97.85
cd04019	150	C2C_MCTP_PRT_plant C2 domain third repeat found in	97.83
PLN02964	644	phosphatidylserine decarboxylase	97.83
cd08376	116	C2B_MCTP_PRT C2 domain second repeat found in Mult	97.8
cd04015	158	C2_plant_PLD C2 domain present in plant phospholip	97.78
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	97.75
cd08378	121	C2B_MCTP_PRT_plant C2 domain second repeat found i	97.75
cd04044	124	C2A_Tricalbin-like C2 domain first repeat present	97.73
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	97.73
cd08686	118	C2_ABR C2 domain in the Active BCR (Breakpoint clu	97.72
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	97.71
cd04022	127	C2A_MCTP_PRT_plant C2 domain first repeat found in	97.7
cd08677	118	C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a	97.69
cd04025	123	C2B_RasA1_RasA4 C2 domain second repeat present in	97.68
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	97.68
cd08395	120	C2C_Munc13 C2 domain third repeat in Munc13 (mamma	97.67
PF14658	66	EF-hand_9: EF-hand domain	97.65
cd04036	119	C2_cPLA2 C2 domain present in cytosolic PhosphoLip	97.64
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	97.63
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	97.6
KOG0038	189	consensus Ca2+-binding kinase interacting protein	97.6
cd08381	122	C2B_PI3K_class_II C2 domain second repeat present	97.59
cd04011	111	C2B_Ferlin C2 domain second repeat in Ferlin. Ferl	97.59
cd08377	119	C2C_MCTP_PRT C2 domain third repeat found in Multi	97.58
cd08382	123	C2_Smurf-like C2 domain present in Smad ubiquitina	97.58
cd04042	121	C2A_MCTP_PRT C2 domain first repeat found in Multi	97.57
cd04037	124	C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli	97.57
cd00052	67	EH Eps15 homology domain; found in proteins implic	97.57
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	97.51
cd04031	125	C2A_RIM1alpha C2 domain first repeat contained in	97.5
cd04045	120	C2C_Tricalbin-like C2 domain third repeat present	97.5
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	97.49
cd08387	124	C2A_Synaptotagmin-8 C2A domain first repeat presen	97.49
cd04014	132	C2_PKC_epsilon C2 domain in Protein Kinase C (PKC)	97.49
cd08676	153	C2A_Munc13-like C2 domain first repeat in Munc13 (	97.47
cd08394	127	C2A_Munc13 C2 domain first repeat in Munc13 (mamma	97.46
cd08388	128	C2A_Synaptotagmin-4-11 C2A domain first repeat pre	97.45
cd08384	133	C2B_Rabphilin_Doc2 C2 domain second repeat present	97.43
cd08405	136	C2B_Synaptotagmin-7 C2 domain second repeat presen	97.43
cd08688	110	C2_KIAA0528-like C2 domain found in the Human KIAA	97.43
cd04049	124	C2_putative_Elicitor-responsive_gene C2 domain pre	97.41
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	97.4
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	97.4
cd04018	151	C2C_Ferlin C2 domain third repeat in Ferlin. Ferli	97.39
cd04020	162	C2B_SLP_1-2-3-4 C2 domain second repeat present in	97.39
cd04029	125	C2A_SLP-4_5 C2 domain first repeat present in Syna	97.39
cd00213	88	S-100 S-100: S-100 domain, which represents the la	97.38
cd04027	127	C2B_Munc13 C2 domain second repeat in Munc13 (mamm	97.38
cd08406	136	C2B_Synaptotagmin-12 C2 domain second repeat prese	97.37
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	97.37
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	97.36
cd04054	121	C2A_Rasal1_RasA4 C2 domain first repeat present in	97.35
cd04017	135	C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl	97.35
cd04010	148	C2B_RasA3 C2 domain second repeat present in RAS p	97.34
cd08401	121	C2A_RasA2_RasA3 C2 domain first repeat present in	97.34
cd08400	126	C2_Ras_p21A1 C2 domain present in RAS p21 protein	97.33
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	97.31
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	97.3
cd08385	124	C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe	97.28
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	97.25
cd04030	127	C2C_KIAA1228 C2 domain third repeat present in unc	97.24
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	97.23
cd08393	125	C2A_SLP-1_2 C2 domain first repeat present in Syna	97.23
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	97.23
cd08386	125	C2A_Synaptotagmin-7 C2A domain first repeat presen	97.22
cd04013	146	C2_SynGAP_like C2 domain present in Ras GTPase act	97.22
cd04043	126	C2_Munc13_fungal C2 domain in Munc13 (mammalian un	97.21
cd04009	133	C2B_Munc13-like C2 domain second repeat in Munc13	97.2
cd08407	138	C2B_Synaptotagmin-13 C2 domain second repeat prese	97.19
cd04021	125	C2_E3_ubiquitin_ligase C2 domain present in E3 ubi	97.19
cd04052	111	C2B_Tricalbin-like C2 domain second repeat present	97.16
cd08685	119	C2_RGS-like C2 domain of the Regulator Of G-Protei	97.15
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	97.14
cd08678	126	C2_C21orf25-like C2 domain found in the Human chro	97.1
cd08392	128	C2A_SLP-3 C2 domain first repeat present in Synapt	97.1
cd04033	133	C2_NEDD4_NEDD4L C2 domain present in the Human neu	97.09
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	97.09
cd08408	138	C2B_Synaptotagmin-14_16 C2 domain second repeat pr	97.06
cd04040	115	C2D_Tricalbin-like C2 domain fourth repeat present	97.02
cd08383	117	C2A_RasGAP C2 domain (first repeat) of Ras GTPase	97.01
KOG4666	412	consensus Predicted phosphate acyltransferase, con	96.98
cd08402	136	C2B_Synaptotagmin-1 C2 domain second repeat presen	96.98
cd08410	135	C2B_Synaptotagmin-17 C2 domain second repeat prese	96.98
PF12588	141	PSDC: Phophatidylserine decarboxylase ; InterPro:	96.96
PLN03200	2102	cellulose synthase-interactive protein; Provisiona	96.94
cd04028	146	C2B_RIM1alpha C2 domain second repeat contained in	96.94
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	96.92
cd08409	137	C2B_Synaptotagmin-15 C2 domain second repeat prese	96.92
cd04051	125	C2_SRC2_like C2 domain present in Soybean genes Re	96.9
cd08521	123	C2A_SLP C2 domain first repeat present in Synaptot	96.89
cd08390	123	C2A_Synaptotagmin-15-17 C2A domain first repeat pr	96.87
PF00168	85	C2: C2 domain; InterPro: IPR000008 The C2 domain i	96.77
cd08403	134	C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe	96.76
cd04035	123	C2A_Rabphilin_Doc2 C2 domain first repeat present	96.7
cd08404	136	C2B_Synaptotagmin-4 C2 domain second repeat presen	96.69
cd04026	131	C2_PKC_alpha_gamma C2 domain in Protein Kinase C (	96.61
cd08675	137	C2B_RasGAP C2 domain second repeat of Ras GTPase a	96.61
cd08691	137	C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li	96.57
cd08373	127	C2A_Ferlin C2 domain first repeat in Ferlin. Ferli	96.53
cd08680	124	C2_Kibra C2 domain found in Human protein Kibra. K	96.5
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	96.49
KOG0041	244	consensus Predicted Ca2+-binding protein, EF-Hand	96.46
KOG2562	493	consensus Protein phosphatase 2 regulatory subunit	96.44
cd08389	124	C2A_Synaptotagmin-14_16 C2A domain first repeat pr	96.43
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	96.4
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	96.38
cd04048	120	C2A_Copine C2 domain first repeat in Copine. There	96.22
cd00275	128	C2_PLC_like C2 domain present in Phosphoinositide-	96.08
cd08690	155	C2_Freud-1 C2 domain found in 5' repressor element	96.08
PF12763	104	EF-hand_4: Cytoskeletal-regulatory complex EF hand	96.06
cd00276	134	C2B_Synaptotagmin C2 domain second repeat present	96.05
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	95.68
cd04047	110	C2B_Copine C2 domain second repeat in Copine. Ther	95.64
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	95.56
PLN03008	868	Phospholipase D delta	95.35
KOG4065	144	consensus Uncharacterized conserved protein [Funct	95.31
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	95.3
KOG4251	362	consensus Calcium binding protein [General functio	95.18
smart00239	101	C2 Protein kinase C conserved region 2 (CalB). Ca2	95.03
smart00054	29	EFh EF-hand, calcium binding motif. EF-hands are c	94.97
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	94.86
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	94.79
COG5038	1227	Ca2+-dependent lipid-binding protein, contains C2	94.7
KOG4251	362	consensus Calcium binding protein [General functio	94.51
cd08692	135	C2B_Tac2-N C2 domain second repeat found in Tac2-N	94.34
KOG1011	1283	consensus Neurotransmitter release regulator, UNC-	94.27
KOG0751	694	consensus Mitochondrial aspartate/glutamate carrie	94.25
cd00030	102	C2 C2 domain. The C2 domain was first identified i	94.09
KOG0696	683	consensus Serine/threonine protein kinase [Signal	93.73
KOG0751	694	consensus Mitochondrial aspartate/glutamate carrie	93.23
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	93.16
PF10591	113	SPARC_Ca_bdg: Secreted protein acidic and rich in	93.08
PF14788	51	EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA	92.89
COG5038	1227	Ca2+-dependent lipid-binding protein, contains C2	92.4
KOG0169	746	consensus Phosphoinositide-specific phospholipase	91.58
cd08689	109	C2_fungal_Pkc1p C2 domain found in protein kinase	91.25
KOG4666	412	consensus Predicted phosphate acyltransferase, con	90.53
PF05042	174	Caleosin: Caleosin related protein; InterPro: IPR0	90.33
KOG1326	1105	consensus Membrane-associated protein FER-1 and re	90.18
KOG1955	737	consensus Ral-GTPase effector RALBP1 [Intracellula	89.18
KOG2562	493	consensus Protein phosphatase 2 regulatory subunit	88.6
KOG1028	421	consensus Ca2+-dependent phospholipid-binding prot	87.88
KOG3555	434	consensus Ca2+-binding proteoglycan Testican [Gene	87.4
KOG0046	627	consensus Ca2+-binding actin-bundling protein (fim	86.38
KOG4578	421	consensus Uncharacterized conserved protein, conta	85.52
PF05042	174	Caleosin: Caleosin related protein; InterPro: IPR0	85.12
KOG0169	746	consensus Phosphoinositide-specific phospholipase	84.29
PLN02223	537	phosphoinositide phospholipase C	83.99
KOG0042	680	consensus Glycerol-3-phosphate dehydrogenase [Ener	83.16
KOG1707	625	consensus Predicted Ras related/Rac-GTP binding pr	82.38
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	81.33
KOG1955	737	consensus Ral-GTPase effector RALBP1 [Intracellula	80.93
PRK09439	169	PTS system glucose-specific transporter subunit; P	80.36
KOG3866	442	consensus DNA-binding protein of the nucleobindin	80.15

>PLN02964 phosphatidylserine decarboxylase

Probab=100.00  E-value=2.5e-125  Score=1029.63  Aligned_cols=539  Identities=74%  Similarity=1.177  Sum_probs=509.0

Q ss_pred             CCCCCCCCcccchhhhHHHHHhhhhhhhhc----cCCCCCCCCCCccccccccccceeEEEEEEeecccccCCceEEEEE
Q 008959            1 MGHGSSKEDESVSRTSRFRKKFHLHRERRR----SRGNGSNSGSHHHNRVLNEEDFAGIALLTLISAEMKFKDKWLACVS   76 (547)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~gi~~i~~~~A~~~~~dd~~~~v~   76 (547)
                      ||||+|++. ++||+|++++||+.+|+|+|    +.++   ++++.++|.+++|+|+||++|+|++|+|.++|+|++|++
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (644)
T PLN02964          1 MGNGNSREA-KESRRSKLRQKLQKFRIRRRHLRCSRGS---SSGSVSQRAVSAEDFSGIALLTLVGAEMKFKDKWLACVS   76 (644)
T ss_pred             CCCCCCCcc-ccCCcchHHHHHHHHHHHHHhhhhccCC---CCccccccceecccccCeEEEEeehhhhccCCcEEEEEE
Confidence            999999977 88999999999999666665    3333   445789999999999999999999999999999999999


Q ss_pred             cccceEeeeecCCCCCCCchhhHHHHHhcCCCcccceecccC----------------------hHH-HHHHHHhhCCCC
Q 008959           77 LGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFED----------------------SDA-DSEVFDLLDPSS  133 (547)
Q Consensus        77 ~g~~~frT~vi~~tLnP~Wne~~kll~e~~~~~~~~isl~e~----------------------~~e-l~~~F~~~D~d~  133 (547)
                      +|.|+|||+++++|+||+||+.++++++.+..+.+.++++|+                      |.+ ++++|+.+|+|+
T Consensus        77 ~g~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dg  156 (644)
T PLN02964         77 FGEQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARISVFETNRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSS  156 (644)
T ss_pred             ecceeeeeccccccCCcccchhhceEeccCCcceEEEEEEecCCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCC
Confidence            999999999999999999999999999988888777777665                      222 788999999999


Q ss_pred             CchhHHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHH
Q 008959          134 SNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE  213 (547)
Q Consensus       134 dG~Il~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~E  213 (547)
                      +|.+++.++..++...+++++..+++++|+.+|.|++|.|+++||..++..++...++++++++|+.+|.|++|+|+++|
T Consensus       157 dG~iLg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dE  236 (644)
T PLN02964        157 SNKVVGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDE  236 (644)
T ss_pred             CCcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHH
Confidence            99999999999984478888888899999999999999999999999999988888899999999999999999999999


Q ss_pred             HHHHHHhhhccCcccccchhHHHHHhhhcccCcccccccccccCCCccccccCcccccchhhHHHhhhcccccccccccc
Q 008959          214 LAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVG  293 (547)
Q Consensus       214 f~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l~~~a~c~~~~~~~~i~~~gf~~~~~a~~~w~~k~l~~~~~~~y~~~  293 (547)
                      |.++|....+....+.+||.|++.+...++.++|+|+|+|++|++++++|+++|+|++||+++|++|+++|++||+|++|
T Consensus       237 L~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~iiH~~~c~~~~~~~~~~~~~~~~~~~a~~~w~~~~~~~~~~~~y~~g  316 (644)
T PLN02964        237 LAALLALQQEQEPIINNCPVCGEALGVSDKLNAMIHMTLCFDEGTGNQVMTGGFLTDKQASYGWMFKLSEWAHLSTYDVG  316 (644)
T ss_pred             HHHHHHhcccCcchhhhchhhcCcccchhhHHHHHHHHHhhcccccceeeccCccchhHHhHHHHHHHHHHHhccccccc
Confidence            99999998888889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCce-EEEEEeccCcceeeeeehhhhhhhhhhhccCcccccccchhHHHHHHHHHHHHHHhhCCccccccHHHHHHH
Q 008959          294 LNSGSRA-HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNF  372 (547)
Q Consensus       294 ~~~~~~~-~i~~~~r~~~~~~~e~~~~~~~~~~~~~y~~~~g~~~l~~~~~~~~~~~s~~~g~~~~s~~S~~~I~~fi~~  372 (547)
                      ++.|+++ +|+|+||.||++++|++++++.++|+|||++++|+.+++++++++|+.+|+++|+++|||+|+..|++||+.
T Consensus       317 ~~~~~~~~~i~~~dR~t~~~~~E~v~~~~~~~~~~lY~~~~G~~~l~~~~~~~l~~~S~~~G~~~dsp~S~~~I~~Fi~~  396 (644)
T PLN02964        317 LNTGSSASHILVFDRKSKRLVEELIDSKIVLSMRAIYQSKIGLRLMDQGAKEILQRLSEKQGKKMNSVESAQDIPKFLEF  396 (644)
T ss_pred             cccCCCcCceEEEECCCCcEEEEEeeeeehhhHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhHcCChhhHHHHHHHHHH
Confidence            9988888 999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hccCCCccccCCCCCCCCChhhhhccccCCCCCcCCCCCCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCCC
Q 008959          373 FKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGND  452 (547)
Q Consensus       373 ~~~~i~~~e~~~p~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~  452 (547)
                      |+++|||+|+++|+.+|+||||||+|+|||++|||+.|+++.++||||||++++|+.|+++..|||||++|||.+|||++
T Consensus       397 ~~~~id~~E~~~p~~~y~SfNdFFtRkLKp~aRPi~~~~~~~~iVSPaDg~v~~~~~i~~~~~~~IKG~~Ysl~~LLg~~  476 (644)
T PLN02964        397 FKDQINMDEVKYPLEHFKTFNEFFIRELKPGARPIACMDNDDVAVCAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGKK  476 (644)
T ss_pred             hhcCcCHHHhhcCcccCCCHHHcceecCCCCCCCCCCCCCCCEEEECCCceeEEeeeecCCcEEEECCCcccHHHHcCCc
Confidence            87789999999999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             cccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEe
Q 008959          453 ICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYS  532 (547)
Q Consensus       453 ~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~  532 (547)
                      ++|++|.||+++++||||.||||||+|++|+|.+.++|||.||||||+|++..++++|++|+|++++|+|+++|+|++|+
T Consensus       477 ~~a~~f~gG~~~i~rLsP~DYHR~HsPv~G~v~~~~~I~G~l~sVnp~al~~~~~~~f~~NeR~v~~iet~~~G~V~~v~  556 (644)
T PLN02964        477 VHSDAFLDGSLVIFRLAPQDYHRFHVPVSGVIEKFVDVPGSLYTVNPIAVNSKYCNVFTENKRAVCIISTAEFGKVAFVA  556 (644)
T ss_pred             hhHHhcCCCEEEEEEECCceeceeecCCCCEEEEEEEECCeeEecChhhhcccccchhhcCeeEEEEEEcCCCCEEEEEE
Confidence            99999999999999999999999999999999999999999999999999765679999999999999999999999999


Q ss_pred             ccccccccccc
Q 008959          533 RSHSHSHSRFG  543 (547)
Q Consensus       533 VGa~~v~~~~~  543 (547)
                      |||++|||++-
T Consensus       557 VGA~~VgsI~~  567 (644)
T PLN02964        557 IGATMVGSITF  567 (644)
T ss_pred             EeeeEeeEEEE
Confidence            99999999863

>KOG2419 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]

Probab=100.00  E-value=3.8e-101  Score=800.23  Aligned_cols=535  Identities=59%  Similarity=0.929  Sum_probs=457.3

Q ss_pred             CCCCCCCCcccchhhhHHHHHhhh---hhhhhccCC----CCCCCCCCccccccc--------------cccceeEEEEE
Q 008959            1 MGHGSSKEDESVSRTSRFRKKFHL---HRERRRSRG----NGSNSGSHHHNRVLN--------------EEDFAGIALLT   59 (547)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~--------------~~~~~gi~~i~   59 (547)
                      ||++++--...++|++..+++.+-   +||.++...    +.++..++..+++.+              +|++.||+.++
T Consensus       206 M~n~S~s~~~~E~rr~e~~~~~~sf~~err~sip~~~~~~sis~~~gl~~~~s~s~~~~~e~~~~~~~~~dd~~gi~ll~  285 (975)
T KOG2419|consen  206 MGNGSNSVEGKESRRSEDRNKSQSFRTERRYSIPNDTIFDSISEVVGLNDQRSVSLNDFEEADHPNVHDADDFTGIALLT  285 (975)
T ss_pred             hcCcccccchhhhhhhhhhccccceeecccccCCcccccccccccccccccccccccccccccCccccccchhhhhHHHH
Confidence            899855554478999999999887   444444321    334466788999999              89999999999


Q ss_pred             Eeecccc----------cCCceEEEEEcccceEeeeecCCCCCCCchhh---------HHHHHhcCCCcccceeccc---
Q 008959           60 LISAEMK----------FKDKWLACVSLGEQTCRTAISDNTDKPIWNSE---------KKLLLETNGPHVARISVFE---  117 (547)
Q Consensus        60 ~~~A~~~----------~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~---------~kll~e~~~~~~~~isl~e---  117 (547)
                      +|+|+|.          ++|+|++|+++|+++|||++.+++++|+||+.         .+.+. ....+....++.+   
T Consensus       286 lI~a~~~~~i~~~~~~~f~~~~~~itsf~~~~frt~~~~~~e~piyNe~~~E~~~Fqsn~~l~-~kiv~~~~~~lndS~A  364 (975)
T KOG2419|consen  286 LIGAEMKYDIVEDVAKLFKDKWLAITSFGEQTFRTEISDDTEKPIYNEDEREDSDFQSNRYLG-NKIVGYCELDLNDSYA  364 (975)
T ss_pred             HhhhhcccchhhhhhhccCCCchheeecchhhhhhhhhcccccccccccccccccchhhHHHh-hhccccccccccchhh
Confidence            9999876          99999999999999999999999999999992         22222 0000111111111   


Q ss_pred             -------------ChHH-HHHHHHhhCCCCCc-----------------hh---HHHHhhhcCCCCCChHHHHHHHHHHH
Q 008959          118 -------------DSDA-DSEVFDLLDPSSSN-----------------KI---VGKISLSCSVEDPIETEKSFARRILS  163 (547)
Q Consensus       118 -------------~~~e-l~~~F~~~D~d~dG-----------------~I---l~~ll~~l~~~~~~~~e~~~l~~~f~  163 (547)
                                   .+.+ -...|.+.|+....                 .+   ++..+..+..+++.+.+..+..+++.
T Consensus       365 ~f~vq~~~sn~~~~~pE~~~~sfnl~~~a~sn~~a~r~~~S~T~~em~~~~~~~vG~~~~s~sie~~v~~~~c~~~~~~s  444 (975)
T KOG2419|consen  365 NFVVQRAKSNFFISEPESTCKSFNLLDPASSNLPALRNRLSKTNYEMDPFIVIVVGSRFFSCSIEDPVETEECFAKRILS  444 (975)
T ss_pred             hhhhhhhhccccccCccccceEEEeecCCcccchhhhhccCccccccCchhHhhhhhHHhhhhhhccccchhhhhhhccc
Confidence                         0111 23334444433222                 11   55555666666777777777888999


Q ss_pred             hhcCCCCCcccHHHHHHHHHhcCCcchHHH---------HHHHHHHhcCCCC-----------------------CCcCH
Q 008959          164 IVDYNQDGQLSFKEFSDLISAFGNQVAANK---------KEELFKAADKNGD-----------------------GVVSV  211 (547)
Q Consensus       164 ~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee---------l~~~F~~~D~d~d-----------------------G~Is~  211 (547)
                      .+|.+.++.+++.+|.++..+++..+...+         ...+|..+|.+++                       |.++.
T Consensus       445 ~~d~~~~fk~sf~~~~~l~~~F~~vvaa~~~~~~D~~~~k~~~~~~lDl~g~~~~~~~~~~lYs~vS~~~~~~s~~~vtV  524 (975)
T KOG2419|consen  445 IVDYEEDFKLSFSEFSDLSFAFGNVVAANKLAWFDMLNEKEELFKALDLNGDPAHAPKQPVLYSYVSYPFLKKSFGVVTV  524 (975)
T ss_pred             ccccccCceEeeehHHHHHHHHHHHHHhhhcchhhhcccchhheehhhccCCcccCccccchhhhccccccccccCeeEH
Confidence            999999999999999999888775444333         5678999999999                       99999


Q ss_pred             HHHHHHHHh-------------hhccCcc----------------------------------cccchhHHHHHhh-hcc
Q 008959          212 DELAALLAL-------------QQEKEPL----------------------------------MNCCPVCGETLEV-ADM  243 (547)
Q Consensus       212 ~Ef~~~l~~-------------l~~~~~~----------------------------------~~~~~~~~~~l~~-~D~  243 (547)
                      ||+..+++.             +.++.+.                                  +..||.|.+.+.. .+.
T Consensus       525 De~v~ll~~~i~~V~~~~er~tq~~q~p~~n~~n~~~~~~Qs~~r~q~~E~~qs~~~~~~~~~i~nCP~C~~~~~~~~~~  604 (975)
T KOG2419|consen  525 DELVALLALDIIQVMLYLERLTQQEQEPIINHFNKSAWAGQSITRSQLVEGLQSWRKSTNFKRIWNCPVCGEALQPTRDK  604 (975)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccccchhhcccCCCCCccccchhhhhhhhhcccccccceeecCCccHHhhhccchhh
Confidence            999998882             2222222                                  3489999998654 478


Q ss_pred             cCcccccccccccCCCccccccCcccccchhhHHHhhhccccccccccccCCCCCceEEEEEeccCcceeeeeehhhhhh
Q 008959          244 VNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEWGHFSSYDVGLNSGSRAHILVFDRRTKRLVEELIDVKIVM  323 (547)
Q Consensus       244 ~~~l~~~a~c~~~~~~~~i~~~gf~~~~~a~~~w~~k~l~~~~~~~y~~~~~~~~~~~i~~~~r~~~~~~~e~~~~~~~~  323 (547)
                      .+-++|+|+|++|+++|+.|+++|++..||+++||+|+++|++||+|++|   .++|+|+|+||+||+++||+++.++.+
T Consensus       605 ~~a~iH~a~C~~~~~~~~~m~~syvs~~qAs~rWfsK~~~k~~ygty~vG---Ss~a~ilVqdR~Tg~ivEEki~a~V~l  681 (975)
T KOG2419|consen  605 LNAMIHMALCFDEGTGNQTMTGSYVSDRQASYRWFSKLSEKTHYGTYDVG---SSAANILVQDRKTGRIVEEKIDAKVVL  681 (975)
T ss_pred             hhhheeeeeeeccccCceeeeccccchhhHHHHHHHHHHHHhhccceecC---CCcceEEEEecccchHHHHhhcceeee
Confidence            88899999999999999999999999999999999999999999999999   456699999999999999999999999


Q ss_pred             hhhhhccCcccccccchhHHHHHHHHHHHHHHhhCCccccccHHHHHHHhccCCCccccCCCCCCCCChhhhhccccCCC
Q 008959          324 SMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPG  403 (547)
Q Consensus       324 ~~~~~y~~~~g~~~l~~~~~~~~~~~s~~~g~~~~s~~S~~~I~~fi~~~~~~i~~~e~~~p~~~y~sfn~FF~R~lk~~  403 (547)
                      +||+||++..|+.+++..++.+|+.+|.++|++|||++|++.|++||++|  .+||+|...|+.+|+||||||+|+||||
T Consensus       682 gmR~iY~gk~~~r~~~~k~k~iL~~Ls~kQGkK~dS~~Sak~I~pFi~Ff--~lnm~ev~~p~~~FKTFNEFFyRkLKPG  759 (975)
T KOG2419|consen  682 GMRAIYQGKIGLRLMDQKAKEILQTLSEKQGKKMDSVESAKQIPPFIEFF--KLNMAEVKYPLKHFKTFNEFFYRKLKPG  759 (975)
T ss_pred             ehhhhhcccccchhhhhhHHHHHHHHHHHhccccCchhhhhhcchHHhhh--hcchhhhcCccccchhHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999  6999999999999999999999999999


Q ss_pred             CCcCCCCCCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCCCceeeecCcCeE
Q 008959          404 ARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGI  483 (547)
Q Consensus       404 ~Rpi~~~~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~  483 (547)
                      +||++.+++++++|||||||+++|+.|++.+.|||||..|||+.|||...-+++|.+|+++|+||+|+||||||+||+|.
T Consensus       760 sRp~a~~nn~dIlvspADsR~~af~~Ie~st~~WIKGrkFsik~Llg~n~n~~~F~dgSi~IfRLAPQDYHRFHsPvnG~  839 (975)
T KOG2419|consen  760 SRPIACMNNKDILVSPADSRLMAFQSIEDSTRFWIKGRKFSIKGLLGYNVNPEAFLDGSIVIFRLAPQDYHRFHSPVNGV  839 (975)
T ss_pred             CcccCCCCCCceeecccccceEeeeeecccceEEEeccEEehhHhhCCCCCchhccCCcEEEEEeccchhhhccCccccc
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             EeEEEEecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          484 IEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       484 v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      |.+..++.|.||+|||+|+++ |.+||+||.|+++.|++.+||+|++|+||||+|||.+
T Consensus       840 Igk~v~v~G~yYTVNPmAvrS-yldVFgEN~RviipIds~eFGKv~~VaiGAmMVGSi~  897 (975)
T KOG2419|consen  840 IGKFVYVSGSYYTVNPMAVRS-YLDVFGENKRVIIPIDSAEFGKVAFVAIGAMMVGSIL  897 (975)
T ss_pred             ccCceEecceEEEechHHHHh-hhhhhcCceEEEEEecchhhccEEEEeecceeeeeEE
Confidence            999999999999999999986 7999999999999999999999999999999999974

>PRK00723 phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=2.5e-60  Score=481.40  Aligned_cols=233  Identities=37%  Similarity=0.614  Sum_probs=218.8

Q ss_pred             EEEEEeccCcceeeeeehhhhhhhhhhhccCcccccccchhHHHHHHHHHHHHHHhhCCccccccHHHHHHHhccCCCcc
Q 008959          301 HILVFDRRTKRLVEELIDVKIVMSMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSVESSKEIPKFVNFFKDQINLA  380 (547)
Q Consensus       301 ~i~~~~r~~~~~~~e~~~~~~~~~~~~~y~~~~g~~~l~~~~~~~~~~~s~~~g~~~~s~~S~~~I~~fi~~~~~~i~~~  380 (547)
                      +|+|+||.||+.++|+++++.  .++|+|+++.|+.+|..++.  .+.+|+++|+++++|.|+..|++|++.|  +|||+
T Consensus         1 ~~~~~~r~~~~~~~e~~~~~~--~~~~~y~~~~gr~~l~~l~~--~~~~S~~~G~~~~~~~s~~~I~~f~~~~--~id~~   74 (297)
T PRK00723          1 MIKYYNRKTKKYEIEKVAGEK--YLKWLYSSPIGKNLLELLIK--KKIFSKIYGWYCDSRLSRKKIKPFVNDF--NIDMS   74 (297)
T ss_pred             CcEEEECCCCceEEEeccHHH--HHHHHhcCHHHHHHHHHhcC--cHHHHHHHHHHhCCcchHHHHHHHHHHh--CCCHH
Confidence            378999999999999988876  48999999999988877554  1459999999999999999999999998  89999


Q ss_pred             ccCCCCCCCCChhhhhccccCCCCCcCCCCCCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCC
Q 008959          381 DVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLN  460 (547)
Q Consensus       381 e~~~p~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~  460 (547)
                      |++.|+++|+||||||+|+|||++|||+.  ++.++||||||+|+++++|+++..+||||++|||.+|||++++|++|.+
T Consensus        75 e~~~~~~~y~sfn~FFtR~lk~~~Rpi~~--~~~~ivSPaDg~v~~~~~i~~~~~~~vKG~~Ysl~~LLg~~~~a~~f~~  152 (297)
T PRK00723         75 ESEKPLSDFKSFNDFFTRKLKPEARPIDQ--GENILISPGDGRLLAYENIDLNSLFQVKGKTYSLKELLGDPELAKKYAG  152 (297)
T ss_pred             HhhcChhhCCCHHHceeecCCCCCCCCCC--CCCEEEECCCcEEEEEEEEcCCCeEEEcCceeeHHHHcCChhHHHhcCC
Confidence            99999999999999999999999999975  5688999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEecccccccc
Q 008959          461 GTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHS  540 (547)
Q Consensus       461 G~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~  540 (547)
                      |+++++||||.||||||+|++|+|.+.++|||.||+|||.++... +++|++|||.+++++|+++|+|++|+|||++||+
T Consensus       153 G~~~~~yLsp~DYHR~HsPv~G~v~~~~~i~G~l~~V~p~~l~~~-~~~f~~NeR~v~~i~t~~~G~v~~v~VGa~~Vgs  231 (297)
T PRK00723        153 GTCLILRLCPTDYHRFHFPDSGICEETRKIKGHYYSVNPIALKKI-FELFCENKREWSIFKSENFGDILYVEVGATCVGS  231 (297)
T ss_pred             CEEEEEEECCCeEEEEEccCCcEEEEEEEECCeEeecChHHhhcc-ccccccceeEEEEEEcCCCCEEEEEEEhheEeeE
Confidence            999999999999999999999999999999999999999998754 7899999999999999889999999999999999


Q ss_pred             cc
Q 008959          541 RF  542 (547)
Q Consensus       541 ~~  542 (547)
                      +.
T Consensus       232 I~  233 (297)
T PRK00723        232 II  233 (297)
T ss_pred             EE
Confidence            75

>PRK03140 phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=5.2e-52  Score=414.46  Aligned_cols=189  Identities=27%  Similarity=0.422  Sum_probs=180.0

Q ss_pred             HHHHHHHHhhCCccccccHHHHHHHhccCCCccccCCCCCCCCChhhhhccccCCCCCcCCCCCCCceeeecCCceeeee
Q 008959          348 SISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAF  427 (547)
Q Consensus       348 ~~s~~~g~~~~s~~S~~~I~~fi~~~~~~i~~~e~~~p~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg~~~~~  427 (547)
                      .+|+++|+++++|.|+..|++|++.|  +|||+|++.|+++|+||||||+|+|||++|||+.  ++.++||||||++.++
T Consensus        17 ~~s~~~g~~~~~~~s~~~i~~f~~~~--~i~~~e~~~~~~~y~sfn~FF~R~lk~~~Rpi~~--~~~~vvSPaDg~v~~~   92 (259)
T PRK03140         17 FTSYLLRKFAQSRLSSILIPSYAKVY--QINQDEMEKGLKEYRTLHELFTRKLKEGKRPIDT--DASSIVSPVDGVFADV   92 (259)
T ss_pred             HHHHHHHHHhCCcccHHHHHHHHHHh--CCChHHhccChhcCCCHHHhceecCCCCCCCCCC--CCCEEEeCCCcEEEEE
Confidence            48999999999999999999999999  8999999999999999999999999999999975  5678999999999999


Q ss_pred             eecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhhhhccCC
Q 008959          428 KSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYC  507 (547)
Q Consensus       428 ~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~  507 (547)
                      ++|+++..+||||++|||.+||+++.++++|.||+++++||||.||||||+|++|+|.+.++++|.||||||.++... +
T Consensus        93 ~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~i~Lsp~DYHr~h~Pv~G~v~~~~~i~G~l~~V~~~~~~~~-~  171 (259)
T PRK03140         93 GPIEDDKTFDVKGKRYSIAEMLGNEERAQRYAGGTYMVLYLSPSHYHRIHSPISGTVTEQFVLGRKSYPVNALGLEYG-K  171 (259)
T ss_pred             eecCCCCEEEECCceeeHHHhcCChhHHhhhcCCeEEEEEECccceEEEeccCCcEEEEEEECCCceeccCHHHhhcC-C
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999987643 6


Q ss_pred             CCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          508 NVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       508 ~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      ++|++|||.++.+++ ++|.|++|+|||++||++.
T Consensus       172 ~~~~~NeR~v~~i~~-~~G~v~~v~Vga~~Vg~I~  205 (259)
T PRK03140        172 RPLSKNYRSVTEVNS-DGEHMALVKVGAMFVNSIE  205 (259)
T ss_pred             ccccccceEEEEEEe-CCceEEEEEEeeEEeeEEE
Confidence            899999999999976 6899999999999999986

>PTZ00403 phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=7.1e-52  Score=424.75  Aligned_cols=190  Identities=26%  Similarity=0.386  Sum_probs=176.9

Q ss_pred             HHHHHHHHHhhCCccccc----cHHHHHHHhccCCCccccCCCCCCCCChhhhhccccCCCCCcCCCCCCCceeeecCCc
Q 008959          347 KSISEKQGRKMNSVESSK----EIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADS  422 (547)
Q Consensus       347 ~~~s~~~g~~~~s~~S~~----~I~~fi~~~~~~i~~~e~~~p~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg  422 (547)
                      +.+|+++|++++++.++.    .|++|++.|  +|||+|++.|+++|+||||||+|+|||++|||+++ ++.++||||||
T Consensus        63 ~~~Srl~G~~a~~~~p~~lr~~ii~~fik~y--~Inl~E~~~~~~~Y~SfndFFtR~lk~~~RPi~~~-~~~~iVSPaDg  139 (353)
T PTZ00403         63 RTRSRITGSIFNIEIPNTYRLPIYNFLIKYM--GINKEEIKYPIESYKSIGDFFSRYIREETRPIGDV-SDYSIVSPCDS  139 (353)
T ss_pred             HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH--CCCHHHhhCChhcCCCHHHceeecccCCCCCCCCC-CCCeEEeCCCc
Confidence            349999999999988764    789999998  89999999889999999999999999999999764 45789999999


Q ss_pred             eeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCC----eEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccC
Q 008959          423 RLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNG----TMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVN  498 (547)
Q Consensus       423 ~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G----~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~  498 (547)
                      +|++++.|+++..+||||++|||.+|||++ ++++|.+|    +++++||||.||||||+|++|+|.+.++|||+|||||
T Consensus       140 ~v~~~g~I~~~~~~qvKG~~Ysl~~LLg~~-~a~~~~~g~~~~~~~v~yLsP~DYHR~HsP~~g~v~~~~~IpG~L~pVn  218 (353)
T PTZ00403        140 ELTDYGELSSEYLENVKGVKFNVNTFLGSD-MQKKYNDGSTKFFYAIFYLSPKKYHHFHAPFNFKYKIRRHISGELFPVF  218 (353)
T ss_pred             eeEeeeEecCCCEEEeCCCcccHHHHhCch-hHHhhcCCCCcEEEEEEEECcceeeEEeccCceEEEEEEEeCCeEeeeC
Confidence            999999999999999999999999999965 78899998    5999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          499 PIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       499 p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      |.+++. ++++|++|||+|+.++| ++|.|++|+|||++||++.
T Consensus       219 p~~l~~-~~~lf~~NERvv~~~~~-~~G~~~~v~VGA~~VGsI~  260 (353)
T PTZ00403        219 QGMFKI-INNLFNINERVILSGEW-KGGNVYYAAISAYNVGNIK  260 (353)
T ss_pred             HHHHhc-CcccccceEEEEEEeec-CCceEEEEEEeeEEEEEEE
Confidence            999975 58999999999999887 6999999999999999985

>PLN02938 phosphatidylserine decarboxylase

Probab=100.00  E-value=1.1e-51  Score=430.23  Aligned_cols=210  Identities=26%  Similarity=0.373  Sum_probs=189.8

Q ss_pred             hhhhhccCcccccccchhHHHHHHHHHHHHHHhhCCc---cccccH-HHHHHHhccCCCccccCCCCCCCCChhhhhccc
Q 008959          324 SMRAIYQSKIGLGLMDIGTKELLKSISEKQGRKMNSV---ESSKEI-PKFVNFFKDQINLADVKYPLEHFKTFNEFFIRE  399 (547)
Q Consensus       324 ~~~~~y~~~~g~~~l~~~~~~~~~~~s~~~g~~~~s~---~S~~~I-~~fi~~~~~~i~~~e~~~p~~~y~sfn~FF~R~  399 (547)
                      +++++|+++++..++..+.   ++.+|++||++.+++   +++..| +.|++.|  +|||+|+++|+++|+||||||+|+
T Consensus        77 g~~~~~~~~~~~~ll~lLP---~r~iSrl~G~~a~~~~P~~lr~~i~~~fa~~f--~inl~E~~~p~~~Y~SfndFFtRk  151 (428)
T PLN02938         77 GIEPEFSPDTKASFLRLLP---LRSISRLWGSLTSVELPVWMRPYVYKAWARAF--HSNLEEAALPLEEYASLREFFVRS  151 (428)
T ss_pred             CcccccCCHHHHHHHHHcc---HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh--CcCHHHhhcchhhCCCHHHhheec
Confidence            3578999999888777765   456999999999998   677666 9999998  899999999999999999999999


Q ss_pred             cCCCCCcCCCCCCCceeeecCCceeeeeeecCC--CceEEEcCcccccccccCCCcc-----------------------
Q 008959          400 LKPGARPIDCMEREEVAVCAADSRLMAFKSVED--SLRFWIKGQKFSIQGLLGNDIC-----------------------  454 (547)
Q Consensus       400 lk~~~Rpi~~~~~~~~~vsPaDg~~~~~~~i~~--~~~~~iKg~~ysl~~lL~~~~~-----------------------  454 (547)
                      |||++|||+.  ++.++||||||+|++++.|++  +..++|||++|||.+|||++..                       
T Consensus       152 LKpgaRPid~--d~~~iVSPaDG~v~~~g~I~~~~~~~~qVKG~~YSL~~LLG~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (428)
T PLN02938        152 LKEGARPIDP--DPNCLVSPVDGIVLRFGELKGPGTMIEQVKGFSYSVSALLGANSLLPMTAEGKEEKEEETLKDKSSKS  229 (428)
T ss_pred             cCCCCCcCCC--CCCeEEeccCCceEEeeeecCCCceEEEecCCcccHHHHcCCCcccccccccccchhhccccccccch
Confidence            9999999984  678899999999999999975  4689999999999999996543                       


Q ss_pred             ----------------cCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhhhhccCCCCccceeEEEE
Q 008959          455 ----------------SNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVS  518 (547)
Q Consensus       455 ----------------a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~  518 (547)
                                      ++.+.||+++++||||.||||||+|++|+|.+.+||||+||||||.+++. ++++|++|||+|+
T Consensus       230 ~~~~~~~~~~~~~~~~a~~~~g~~~~ViYLsP~DYHR~HsP~dg~v~~~rhipG~L~sVnp~~~~~-i~~LF~~NERvVl  308 (428)
T PLN02938        230 WLRVSLASPKLRDPVSASPMKGLFYCVIYLGPGDYHRIHSPSDWNIEVRRHFSGRLFPVNERATRT-IRNLYVENERVVL  308 (428)
T ss_pred             hhhhhhccccccccccccccCCcEEEEEEeCccccceEeecCCcEEEEEEEcCCcccccCHHHHhh-CCCccccceEEEE
Confidence                            36688999999999999999999999999999999999999999999874 5899999999999


Q ss_pred             EEeecCcceEEEEecccccccccc
Q 008959          519 IISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       519 ~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      ..++ ++|.|++|+|||++|||+.
T Consensus       309 ~g~w-~~G~~a~v~VGAtnVGsI~  331 (428)
T PLN02938        309 EGEW-QEGFMAMAAVGATNIGSIE  331 (428)
T ss_pred             Eeec-CCceEEEEEEeeeEEEEEE
Confidence            8887 7999999999999999976

>PRK00044 psd phosphatidylserine decarboxylase; Reviewed

Probab=100.00  E-value=4.1e-51  Score=414.29  Aligned_cols=190  Identities=32%  Similarity=0.595  Sum_probs=179.1

Q ss_pred             HHHHHHHHHhhCCc---cccccHHHHHHHhccCCCccccCCC-CCCCCChhhhhccccCCCCCcCCCCCCCceeeecCCc
Q 008959          347 KSISEKQGRKMNSV---ESSKEIPKFVNFFKDQINLADVKYP-LEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADS  422 (547)
Q Consensus       347 ~~~s~~~g~~~~s~---~S~~~I~~fi~~~~~~i~~~e~~~p-~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg  422 (547)
                      +.+|+++|++++++   .|+..|++|++.|  +|||+|+++| +++|+||||||+|+|||++|||+.  ++.++||||||
T Consensus        16 ~~~Sr~~g~~~~~~~~~~~~~~i~~f~~~~--~i~~~E~~~~~~~~y~s~~~FF~R~lk~~~Rpi~~--~~~~ivSPaDG   91 (288)
T PRK00044         16 HLLTRLAGWLASSRAGWLTTAVIRLFIKKY--KVDMSEAQKPDPAAYKTFNDFFTRALKDGARPIDE--DPNALVSPADG   91 (288)
T ss_pred             HHHHHHHHHHHcCCCccchHHHHHHHHHHh--CCCHHHHccCChhhCCCHHHhceecccCCCCCCCC--CCCEEEeCCCc
Confidence            45999999999999   8999999999999  8999998865 899999999999999999999985  56789999999


Q ss_pred             eeeeeeecCCCceEEEcCcccccccccC-CCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhh
Q 008959          423 RLMAFKSVEDSLRFWIKGQKFSIQGLLG-NDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIA  501 (547)
Q Consensus       423 ~~~~~~~i~~~~~~~iKg~~ysl~~lL~-~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a  501 (547)
                      +|+++++|+++..+||||++|||++||| ++.++++|.||+++++||||.||||||+|++|+|.+.+||||.||+|||.+
T Consensus        92 ~v~~~~~i~~~~~~~vKG~~Ysl~~lL~~~~~~~~~~~~G~~i~iyLsp~DYHr~HsPv~G~v~~~~~i~G~~~~v~~~~  171 (288)
T PRK00044         92 AISQLGPIEDGQIFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYHRVHMPCDGTLREMIYVPGDLFSVNPLT  171 (288)
T ss_pred             eEEeEEeecCCCEEEECCceeeHHHHcCCChHHHHhcCCCEEEEEEECcceeeEEeccCCcEEEEEEEeCCcccccCHHH
Confidence            9999999999999999999999999998 678899999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          502 VNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       502 ~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      ++. ++++|++|||+++.++|+ +|.|++|+|||++|||+.
T Consensus       172 ~~~-~~~lf~~NeR~v~~i~t~-~G~v~~v~VGA~~VGsI~  210 (288)
T PRK00044        172 ARN-VPNLFARNERVVCLFDTE-FGPMAQVLVGATIVGSIE  210 (288)
T ss_pred             hcc-CCCccceeeEEEEEEECC-CCcEEEEEEeeEeecceE
Confidence            864 589999999999999995 899999999999999864

>PRK03934 phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=2.3e-49  Score=396.72  Aligned_cols=189  Identities=28%  Similarity=0.378  Sum_probs=173.6

Q ss_pred             HHHHHHHHHHhhCCccccc----cHHHHHHHhccCCCccccCCCCCCCCChhhhhccccCCCCCcCCCCCCCceeeecCC
Q 008959          346 LKSISEKQGRKMNSVESSK----EIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAAD  421 (547)
Q Consensus       346 ~~~~s~~~g~~~~s~~S~~----~I~~fi~~~~~~i~~~e~~~p~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaD  421 (547)
                      ++.+|+++|++++++.|+.    .|++|++.|  +|||+|++ ++++|+||||||+|+|||+ |||+.  ++.++|||||
T Consensus         4 ~~~~S~~~g~~~~~~~~~~~~~~~i~~f~~~~--~i~~~e~~-~~~~y~sfn~FF~R~lk~~-Rpi~~--~~~~ivSPaD   77 (265)
T PRK03934          4 SNALSRIFGKFAGYKFPKFIQKFINASYVKIF--KIDMSEFK-PPENYKSLNALFTRSLKKP-REFDE--DPNIFISPCD   77 (265)
T ss_pred             hHHHHHHHHHHhcCCCCccchHHHHHHHHHHH--CCCHHHhc-CcccCCCHHHhccccCCCC-CCCCC--CCCEEEECCC
Confidence            4569999999999997654    679999998  89999997 6899999999999999985 99964  5788999999


Q ss_pred             ceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhh
Q 008959          422 SRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIA  501 (547)
Q Consensus       422 g~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a  501 (547)
                      |+|++++.|+++..+||||++|+|.+|||++. +++|.+|+++++||||.||||||+|++|+|.+.+||||.||+|||.+
T Consensus        78 G~v~~~~~i~~~~~~~vKg~~y~l~~lL~~~~-~~~~~~g~~~~iyLsp~dYHr~hsP~~G~v~~~~~ipG~~~~vn~~~  156 (265)
T PRK03934         78 SLITECGSLEEDKALQIKGMEYSIEELLGESN-SELVNGFDYINFYLSPKDYHRYHAPCDLEILEARYIPGKLYPVNLPS  156 (265)
T ss_pred             cEEEEEEEECCCCEEEECCccccHHHHcCCcc-hhhcCCcEEEEEEECcceEEEEeccCCcEEEEEEEcCCeeeccCHHH
Confidence            99999999999999999999999999999874 59999999999999999999999999999999999999999999998


Q ss_pred             hhccCCCCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          502 VNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       502 ~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      +.. .+++|++|||+++.++|+..|.|++|+|||++||++.
T Consensus       157 ~~~-~~~lf~~NeR~v~~~et~~g~~v~~v~VgA~~Vg~I~  196 (265)
T PRK03934        157 LEK-NKNLFVKNERVVLKCKDKKGKRLYFVFVGALNVGKMR  196 (265)
T ss_pred             Hhh-cCccccceeEEEEEEEcCCCCEEEEEEEeeEEeeEEE
Confidence            864 4789999999999999976559999999999999875

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=2.6e-47  Score=421.61  Aligned_cols=190  Identities=27%  Similarity=0.469  Sum_probs=177.8

Q ss_pred             HHHHHHHHHhhCCcc---ccccHHHHHHHhccCCCccccC-CCCCCCCChhhhhccccCCCCCcCCCCCCCceeeecCCc
Q 008959          347 KSISEKQGRKMNSVE---SSKEIPKFVNFFKDQINLADVK-YPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADS  422 (547)
Q Consensus       347 ~~~s~~~g~~~~s~~---S~~~I~~fi~~~~~~i~~~e~~-~p~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg  422 (547)
                      +.+|+++|++.+++.   ++..|++|++.|  +|||+|++ +|+++|+||||||+|+|||++|||+.  ++.++||||||
T Consensus       339 ~~~S~~~g~~a~~~~~~~~~~~i~~fi~~y--~i~l~E~~~~~~~~y~sfn~FF~R~lk~~~Rpi~~--~~~~ivSPaDg  414 (610)
T PRK09629        339 HLLSRLAGCVAECRVRWFKNAFTAWFARRY--QVDMSQALVEDLTSYEHFNAFFTRALKADARPLDT--TPGAILSPADG  414 (610)
T ss_pred             HHHHHHHHHHHhCccHhhHHHHHHHHHHHh--CCCHHHhhccCcccCCCHHHhcccccCCCCCCCCC--CCCeEEecCcc
Confidence            349999999988874   777799999999  89999987 57999999999999999999999975  57889999999


Q ss_pred             eeeeeeecCCCceEEEcCcccccccccC-CCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhh
Q 008959          423 RLMAFKSVEDSLRFWIKGQKFSIQGLLG-NDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIA  501 (547)
Q Consensus       423 ~~~~~~~i~~~~~~~iKg~~ysl~~lL~-~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a  501 (547)
                      +|++++.|+++..|||||++|||.+||| ++.++++|.||+++++||||.||||||+|++|+|.+.+||||+||+|||.+
T Consensus       415 ~v~~~g~i~~~~~~~vKG~~Ysl~eLL~~~~~~~~~~~~G~~~~iyLsP~DYHR~H~Pv~G~v~~~~~ipG~l~sV~~~~  494 (610)
T PRK09629        415 AISQLGPIDHGRIFQAKGHSFSVLELLGGDPKLSAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYVPGRIFSVNQTT  494 (610)
T ss_pred             ceeeeccccCCcEEEECCCcccHHHHhCCCHHHHhhcCCCeEEEEEECCCeeEEEeecCCcEEEEEEEECCeEEeccHHH
Confidence            9999999999999999999999999998 778899999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          502 VNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       502 ~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      ++. .+++|++|||++++++| ++|.|++|+|||++|||+.
T Consensus       495 ~~~-~~~lf~~NeR~v~~i~t-~~G~~~~v~VGA~~VgsI~  533 (610)
T PRK09629        495 AEN-VPELFARNERVVCLFDT-ERGPMAVVLVGAMIVASVE  533 (610)
T ss_pred             hhc-cCccchhceeEEEEEEe-CCCeEEEEEeceEeeeeEE
Confidence            874 48999999999999999 5899999999999999985

>TIGR00163 PS_decarb phosphatidylserine decarboxylase precursor

Probab=100.00  E-value=3.4e-45  Score=361.69  Aligned_cols=159  Identities=32%  Similarity=0.566  Sum_probs=149.2

Q ss_pred             ccccCC-CCCCCCChhhhhccccCCCCCcCCCCCCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCCC-cccC
Q 008959          379 LADVKY-PLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGND-ICSN  456 (547)
Q Consensus       379 ~~e~~~-p~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~-~~a~  456 (547)
                      |+|+++ ++.+|+||||||+|+|||++|||+.  ++.++||||||+|+.++.|++...+||||++|||.+||+++ .+++
T Consensus         1 ~~e~~~~~~~~y~s~n~FF~R~lk~~~Rpi~~--~~~~ivSPaDG~v~~~~~i~~~~~~~vKG~~ysl~~lL~~~~~~~~   78 (238)
T TIGR00163         1 LDEAEKPDLADYRSLNEFFIRPLKLERRPVDK--EPNALVSPADGVISEVGIINPNQILQVKGMDYSLEELLGEKNPLSP   78 (238)
T ss_pred             CchhccCCcccCCCHHHheeecCCCCCCCCCC--CCCEEEECCCceeEEEEEecCCcEEEEcCCcccHHHHcCCChhHHH
Confidence            578875 5899999999999999999999975  57889999999999999999999999999999999999865 7899


Q ss_pred             CcCCCe-EEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEeccc
Q 008959          457 SFLNGT-MVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSH  535 (547)
Q Consensus       457 ~f~~G~-~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa  535 (547)
                      +|.||. ++++||||.||||||+|++|+|.+++||||+||+|||.++.. .+++|++|||+++.++| .+|.|++|+|||
T Consensus        79 ~f~~G~~~i~iyLsp~DYHr~hsPv~G~v~~~~~ipG~~~~v~~~~~~~-~~~lf~~NeR~v~~i~~-~~G~v~~v~VGA  156 (238)
T TIGR00163        79 YFRNGGFFVVTYLSPRDYHRFHSPCDCRLRKMRYFPGDLFSVNPLGLQN-VPNLFVRNERVILVFDT-EFGNMLMIPVGA  156 (238)
T ss_pred             hccCCeEEEEEEECccceeEEeccCCcEEEEEEEcCccEeccCHHHHhc-CCCcceeeeEEEEEEEe-CCceEEEEEEee
Confidence            999998 889999999999999999999999999999999999999864 48899999999999998 699999999999


Q ss_pred             cccccc
Q 008959          536 SHSHSR  541 (547)
Q Consensus       536 ~~v~~~  541 (547)
                      ++||++
T Consensus       157 ~~Vg~I  162 (238)
T TIGR00163       157 TNVGSI  162 (238)
T ss_pred             eEeeEE
Confidence            999988

Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein. A closely related family, possibly also active as phosphatidylserine decarboxylase, falls under model TIGR00164.

>PF02666 PS_Dcarbxylase: Phosphatidylserine decarboxylase; InterPro: IPR003817 Phosphatidylserine decarboxylase plays a pivotal role in the synthesis of phospholipid by the mitochondria

Probab=100.00  E-value=4.1e-40  Score=318.85  Aligned_cols=148  Identities=39%  Similarity=0.597  Sum_probs=140.3

Q ss_pred             hhhhhccccCCCCCcCCCCCCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCC-CcccCCcCCCeEEEEEeCC
Q 008959          392 FNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGN-DICSNSFLNGTMVIFRLAP  470 (547)
Q Consensus       392 fn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~-~~~a~~f~~G~~~~~~Lsp  470 (547)
                      ||+||+|+||+++|||+.+  +++++|||||+++++++|+++..+||||++|++.+||++ .++++.|.+|+++++||||
T Consensus         1 f~~FF~r~~r~~~R~i~~~--~~~ivSPaDG~v~~~~~i~~~~~~~iKg~~y~l~~ll~~~~~~~~~~~~g~~i~i~Lsp   78 (202)
T PF02666_consen    1 FNDFFTRFFRDPARPIPDD--PDAIVSPADGKVLVIGEIEEDSLFQIKGQPYSLRELLGDPSPLAEPFQGGTFIVIYLSP   78 (202)
T ss_pred             ChhHeehhcCCCCCCCCCC--CCEEEeCcCcEEEeeEEECCCceEEEecCcCCHHHHhCccccceeccCCceEEEEEcCC
Confidence            8999999999999999874  558999999999999999999999999999999999998 7899999999999999999


Q ss_pred             CCceeeecCcCeEEeEEEEecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEeccccccccccc
Q 008959          471 QDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRFG  543 (547)
Q Consensus       471 ~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~~  543 (547)
                      .||||||+|++|+|.+.++|||.+|+|+|.++... +++|++|||+++++++ ++|+|++++|||++|++++-
T Consensus        79 ~DyHr~haPv~G~v~~~~~i~G~~~~v~~~~~~~~-~~~~~~NeR~~~~i~~-~~G~v~~v~Vga~~v~~I~~  149 (202)
T PF02666_consen   79 FDYHRNHAPVDGRVEEVRYIPGKLLPVNPPALSHI-PGLFAENERVVLVIET-KFGKVAVVQVGALLVGSIVL  149 (202)
T ss_pred             CcceEEEecCCEEEEEEEEECccccccChHHhhcc-CCeeEEeeEEEEEEEE-CCCEEEEEEeccceeceeEE
Confidence            99999999999999999999999999999998754 8999999999999996 79999999999999999753

The substrate phosphatidylserine is synthesized extramitochondrially and must be translocated to the mitochondria prior to decarboxylation []. Phosphatidylserine decarboxylases 4.1.1.65 from EC is responsible for conversion of phosphatidylserine to phosphatidylethanolamine and plays a central role in the biosynthesis of aminophospholipids [].; GO: 0004609 phosphatidylserine decarboxylase activity, 0008654 phospholipid biosynthetic process

>KOG2420 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]

Probab=100.00  E-value=6.6e-38  Score=309.35  Aligned_cols=185  Identities=32%  Similarity=0.507  Sum_probs=158.9

Q ss_pred             HHHHHHHHHHhhCCccccccHHHHHH---------HhccCCCccccCCC-CCCCCChhhhhccccCCCCCcCCCCCCCce
Q 008959          346 LKSISEKQGRKMNSVESSKEIPKFVN---------FFKDQINLADVKYP-LEHFKTFNEFFIRELKPGARPIDCMEREEV  415 (547)
Q Consensus       346 ~~~~s~~~g~~~~s~~S~~~I~~fi~---------~~~~~i~~~e~~~p-~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~  415 (547)
                      |+.+|++||.+..     ..||.|++         .|  ++||+|+..| +.+|+||.|||+|+|||++|||++   ...
T Consensus        87 lrtlSR~WG~~n~-----~elP~wlR~~~y~lys~~F--g~NL~Ea~~pDl~hY~nlaeFF~RkLKpg~RpIdp---~~p  156 (382)
T KOG2420|consen   87 LRTLSRVWGQLNS-----LELPVWLRPPGYGLYARTF--GCNLDEAADPDLTHYRNLAEFFTRKLKPGTRPIDP---ASP  156 (382)
T ss_pred             hHHHHHHHHhhhh-----eeccchhcchhhhhhhHhh--ccCchhccCchhhhhhhHHHHHhhccCCCCcccCC---CCc
Confidence            6779999998764     34555444         44  8999999988 899999999999999999999986   467


Q ss_pred             eeecCCceeeeeeecCCCceEEEcCcccccccccCCC--------cccC--Cc------------CCC---eEEEEEeCC
Q 008959          416 AVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGND--------ICSN--SF------------LNG---TMVIFRLAP  470 (547)
Q Consensus       416 ~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~--------~~a~--~f------------~~G---~~~~~~Lsp  470 (547)
                      +||||||+|+.|+.|+++..-||||.+|||++|||..        .+.+  +.            ..+   +..++||+|
T Consensus       157 iVSPaDGkIL~fG~v~~~~IEqVKG~tYSleafLG~~~~P~~~~~d~~~f~~~~as~~~lk~~~s~~~~~Ly~~VIYLaP  236 (382)
T KOG2420|consen  157 LVSPADGKILHFGVVEDNEIEQVKGHTYSLEAFLGTHSHPSCASVDLPQFARVSASCDELKPSVSRPGTELYQCVIYLAP  236 (382)
T ss_pred             eecCCCCcEEEEEEecCceeeEecCeeeeHHHHcCCCCCCccccccccccccccCchhhhhhcCCCcccceeEEEEEccC
Confidence            8999999999999999999999999999999999921        1111  01            112   577889999


Q ss_pred             CCceeeecCcCeEEeEEEEecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          471 QDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       471 ~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      .||||||+|++++++..+|++|.+++|+|.... ..+++|+.|||+++..+. ..|.+.+++|||++|||+.
T Consensus       237 GDYH~fHSP~dWv~t~rRHf~G~l~svsp~~~~-~l~~lf~LnerV~l~G~w-khGFfs~taVGATNvGsI~  306 (382)
T KOG2420|consen  237 GDYHRFHSPADWVATVRRHFPGLLLSVSPTLAR-WLPNLFCLNERVVLLGSW-KHGFFSMTAVGATNVGSIV  306 (382)
T ss_pred             CcccccCChHHhhhhhhhcccCcccccChhhhc-cCCceEEEEEEeeeccee-eeceeeeeeeccCccceEE
Confidence            999999999999999999999999999998765 569999999999988776 7899999999999999975

>COG0688 Psd Phosphatidylserine decarboxylase [Lipid metabolism]

Probab=100.00  E-value=7.3e-38  Score=306.86  Aligned_cols=172  Identities=34%  Similarity=0.474  Sum_probs=160.2

Q ss_pred             HHHHHHHHHhhCCccccccHHHHHHHhccCCCccccCCCCCCCCChhhhhccccCCCCCcCCCCCCCceeeecCCceeee
Q 008959          347 KSISEKQGRKMNSVESSKEIPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMA  426 (547)
Q Consensus       347 ~~~s~~~g~~~~s~~S~~~I~~fi~~~~~~i~~~e~~~p~~~y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg~~~~  426 (547)
                      +.++...|.++.++.++..|.+|+..|  .+||+|+..|...|.|||+||+|.+++..||+++    + .++|+||++++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~fi~~~--~v~~~e~~~~~~~~~~~~~~f~r~l~~~~Rp~dp----~-~v~P~D~~i~~   85 (239)
T COG0688          13 RLFGLLAGVRSPSPIIKREIYPFIAAF--LVDMSEAEKPLEPYASLNEFFTRFLKYFFRPIDP----E-RVSPADGRIVV   85 (239)
T ss_pred             hhHHHHhhhcCCCceeehhhhhHHHHH--HhhHHHhhhhhhHHHHHHHHHHHHHhcccccCCC----C-ccCCCCCcEEE
Confidence            347788888899999999999999998  8999999988899999999999999999999985    2 79999999999


Q ss_pred             eeecCCCceEEEcCcccccccccC-CCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEEEecCceeccChhhhhcc
Q 008959          427 FKSVEDSLRFWIKGQKFSIQGLLG-NDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSK  505 (547)
Q Consensus       427 ~~~i~~~~~~~iKg~~ysl~~lL~-~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~  505 (547)
                      ++         +||+.|++++||+ +++++..|.+|+++++||||.||||+|+||+|+|.+++|+||.+++|||.+    
T Consensus        86 ~p---------akG~~~sv~~ll~~~~el~~~~~~g~~v~i~Lsp~DyHr~haP~~G~i~~~~~~~G~~~~v~~~~----  152 (239)
T COG0688          86 SP---------ADGRVYSVEELLGPDDELAYGDRDGTRVSIFLSPFDYHRNHAPVDGTIIEVRYVPGKFFSANLDK----  152 (239)
T ss_pred             ec---------CCCeEEEHHHhcCChhhhccccCCceEEEEEeCcceeeeEeCCCCCEEEEEEEECCceeccChhh----
Confidence            98         8999999999998 558889999999999999999999999999999999999999999999965    


Q ss_pred             CCCCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          506 YCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       506 ~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                         +|++|||++++++|+ .|+|++|+|||++|++.+
T Consensus       153 ---~~~~NER~~~~i~t~-~g~v~~v~Vga~~v~~Iv  185 (239)
T COG0688         153 ---AFTENERNSVLIETE-QGKVVVVQVAGLVARRIV  185 (239)
T ss_pred             ---hhcccceEEEEEEcC-CCcEEEEEEhhheeeEEE
Confidence               788999999999995 669999999999999875

>TIGR00164 PS_decarb_rel phosphatidylserine decarboxylase precursor-related protein

Probab=99.89  E-value=3.8e-23  Score=197.80  Aligned_cols=116  Identities=24%  Similarity=0.293  Sum_probs=97.2

Q ss_pred             CCChhhhhccccCCCCCcCCCCCCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCC--eEEEE
Q 008959          389 FKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNG--TMVIF  466 (547)
Q Consensus       389 y~sfn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G--~~~~~  466 (547)
                      +..|+.||.|.   +.||++.  ++++++|||||+|..++++                        ++.|.+|  .++++
T Consensus        15 ~~~~~~~ffR~---p~R~~~~--~~~~ivSPaDG~v~~i~~~------------------------~~~~~~g~~~~i~I   65 (189)
T TIGR00164        15 FTLFTLQFFRD---PDREIPQ--GPEAVLSPADGRIDVVERA------------------------RRPFPDGDGLKISI   65 (189)
T ss_pred             HHHHHHHhcCC---CCCCCCC--CCCEEEeCCCcEEEEEEee------------------------ccccCCCcEEEEEE
Confidence            44588899887   7899864  6788999999999987652                        2345555  67888


Q ss_pred             EeCCCCceeeecCcCeEEeEEEEecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEeccccccccc
Q 008959          467 RLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSR  541 (547)
Q Consensus       467 ~Lsp~dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~  541 (547)
                      ||||.||||+|+|++|+|.+.+++||.+++++-       ..++.+|||+++.++|+ .|+|++++||++.+++.
T Consensus        66 ~Lsp~DyHr~haP~~G~v~~~~~~~G~~~~~~~-------~~~~~~NeR~~~~~~t~-~G~v~~v~v~~~~~~~i  132 (189)
T TIGR00164        66 FMSPFDVHVNRAPAGGKVTYVKHIDGSFVPAFL-------RKASTENERNAVLIKTA-SGEVGVVQIAGFVARRI  132 (189)
T ss_pred             EcCCcccceEEcccccEEEEEEEECCeEeeccc-------CcccccceeEEEEEEcC-CCCEEEEEECeEEccEE
Confidence            999999999999999999999999999998641       35788999999999995 89999999999876654

It is unclear whether this protein is a form of phosphatidylserine decarboxylase or is a related enzyme. It is found in Neisseria gonorrhoeae, Mycobacterium tuberculosis, and several archaeal species, all of which lack known phosphatidylserine decarboxylase.

>PRK05305 phosphatidylserine decarboxylase; Provisional

Probab=99.86  E-value=1.4e-21  Score=189.45  Aligned_cols=117  Identities=20%  Similarity=0.227  Sum_probs=99.0

Q ss_pred             hhhhhccccCCCCCcCCCCCCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCC
Q 008959          392 FNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQ  471 (547)
Q Consensus       392 fn~FF~R~lk~~~Rpi~~~~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~  471 (547)
                      |..||.|.   +.||++.  +++.++|||||++..++++++.              ++++        +...+.+||+|.
T Consensus        37 ~~~~ffRd---p~R~~~~--~~~~i~SPaDG~v~~i~~v~d~--------------~~~~--------~~~~i~i~lsp~   89 (206)
T PRK05305         37 FCLYFFRD---PERVIPT--DDGLVVSPADGKVVVIEEVVPP--------------YGDE--------PRLRISIFMSVF   89 (206)
T ss_pred             HHHheecC---CCCCCCC--CCCEEEeCCCcEEEEEEEECCC--------------ccCC--------ceEEEEEEECcc
Confidence            77888888   6899864  6788999999999999998761              2332        234689999999


Q ss_pred             CceeeecCcCeEEeEEEEecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEecccccccccc
Q 008959          472 DYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSHSHSRF  542 (547)
Q Consensus       472 dYHr~h~P~~G~v~~~~~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~v~~~~  542 (547)
                      ||||+|+|++|+|.+.+|+||.+++++.       +..+++|||+++.++|++.|.+++++|||+.+++.+
T Consensus        90 d~H~~~aP~~G~V~~~~~~~G~~~~~~~-------~~~~~~NeR~~~~~~t~~~g~~~~~~i~~~~~r~I~  153 (206)
T PRK05305         90 NVHVNRAPVSGTVTKVEYRPGKFLNAFL-------DKASEENERNAVVIETADGGEIGVVQIAGLIARRIV  153 (206)
T ss_pred             cCCEEEeCccCEEEEEEEECCeEEecCC-------CcccccCceEEEEEEeCCCCEEEEEEeCeEEccEEE
Confidence            9999999999999999999999999863       346789999999999977889999999998877553

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.51  E-value=1.2e-13  Score=127.82  Aligned_cols=118  Identities=31%  Similarity=0.524  Sum_probs=104.2

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcc-----hHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV-----AAN  192 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~-----~~e  192 (547)
                      ++++|+.||.|++|.|    ++.+++.++. .|++.+   +..+++.+|.|++|.|+++||..++...+...     ..+
T Consensus        10 l~~~F~~fD~d~~G~i~~~el~~~lr~lg~-~~t~~e---l~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~   85 (151)
T KOG0027|consen   10 LKEAFQLFDKDGDGKISVEELGAVLRSLGQ-NPTEEE---LRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSE   85 (151)
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHH
Confidence            8999999999999999    8889999987 688888   99999999999999999999999998754432     345


Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCcc
Q 008959          193 KKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l  247 (547)
                      +++++|+.||.|++|+||.+||..+|..+++....    ..|.++++..|.+++.
T Consensus        86 el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~----~e~~~mi~~~d~d~dg  136 (151)
T KOG0027|consen   86 ELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTD----EECKEMIREVDVDGDG  136 (151)
T ss_pred             HHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCH----HHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999999998763    5689999888875554

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.46  E-value=5.9e-13  Score=122.57  Aligned_cols=122  Identities=27%  Similarity=0.342  Sum_probs=105.4

Q ss_pred             ccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcc
Q 008959          116 FEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQV  189 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~  189 (547)
                      .+.+.+ ++++|.++|+|++|.|    +..+++.++. .+++.+   +.++|..+|. ++|.|++.+|..+|.. +....
T Consensus        15 t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~-~~s~~e---i~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~   89 (160)
T COG5126          15 TEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGF-NPSEAE---INKLFEEIDA-GNETVDFPEFLTVMSVKLKRGD   89 (160)
T ss_pred             CHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCC-CCcHHH---HHHHHHhccC-CCCccCHHHHHHHHHHHhccCC
Confidence            333444 9999999999999999    8888888887 677777   9999999999 9999999999999987 45667


Q ss_pred             hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          190 AANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       190 ~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.++++.+|+.||+|+||+|+..|++.+++.+++..++    ..+.++|+..|.+++
T Consensus        90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~d----eev~~ll~~~d~d~d  142 (160)
T COG5126          90 KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSD----EEVEKLLKEYDEDGD  142 (160)
T ss_pred             cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCH----HHHHHHHHhcCCCCC
Confidence            78999999999999999999999999999999998776    467788887775444

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.34  E-value=1.1e-11  Score=111.95  Aligned_cols=127  Identities=21%  Similarity=0.334  Sum_probs=108.3

Q ss_pred             ceecccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-c
Q 008959          112 RISVFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-F  185 (547)
Q Consensus       112 ~isl~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-l  185 (547)
                      ...+.+.+.+ +++.|++||++++|+|    +.-.++++++ .+..++   +.++...+|.++.|.|++++|...+.. +
T Consensus        24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGF-E~~k~e---i~kll~d~dk~~~g~i~fe~f~~~mt~k~   99 (172)
T KOG0028|consen   24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGF-EPKKEE---ILKLLADVDKEGSGKITFEDFRRVMTVKL   99 (172)
T ss_pred             CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCC-CcchHH---HHHHHHhhhhccCceechHHHHHHHHHHH
Confidence            3445556666 9999999999999999    5566788887 555666   889999999999999999999999876 7


Q ss_pred             CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          186 GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       186 g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ++..+.+++..+|+.+|.|++|.||..+|+.++.++++...+    ..+.++|.+.|..++
T Consensus       100 ~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD----~El~eMIeEAd~d~d  156 (172)
T KOG0028|consen  100 GERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTD----EELMEMIEEADRDGD  156 (172)
T ss_pred             hccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccH----HHHHHHHHHhccccc
Confidence            887899999999999999999999999999999999997765    568888888776544

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.28  E-value=1.7e-11  Score=112.88  Aligned_cols=98  Identities=22%  Similarity=0.438  Sum_probs=84.7

Q ss_pred             hHHHHHHHHhhCCCCCchh-HHHHhhhcCCC---CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI-VGKISLSCSVE---DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK  194 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~---~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel  194 (547)
                      +.++.++|..+|. +.+.| +.+++..++..   ....++   ++.+|+.||.|+||+|+..|+..+++.+|+.++++++
T Consensus        55 ~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Ee---l~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev  130 (160)
T COG5126          55 EAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEE---LREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEV  130 (160)
T ss_pred             HHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHH---HHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHH
Confidence            4448999999999 88888 77766655432   223444   9999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          195 EELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.+++.+|.|+||+|+++||.+++..
T Consensus       131 ~~ll~~~d~d~dG~i~~~eF~~~~~~  156 (160)
T COG5126         131 EKLLKEYDEDGDGEIDYEEFKKLIKD  156 (160)
T ss_pred             HHHHHhcCCCCCceEeHHHHHHHHhc
Confidence            99999999999999999999998743

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.24  E-value=4.4e-11  Score=110.64  Aligned_cols=102  Identities=17%  Similarity=0.343  Sum_probs=84.2

Q ss_pred             hHHHHHHHHhhCCCCCchh-HHH---HhhhcCCCCCChH-HHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI-VGK---ISLSCSVEDPIET-EKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANK  193 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I-l~~---ll~~l~~~~~~~~-e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee  193 (547)
                      +.++..+++.+|.|++|.| +.+   ++........... ..+.++++|+.||.|++|+|+.+||..+|..+|...+.++
T Consensus        43 ~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e  122 (151)
T KOG0027|consen   43 EEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEE  122 (151)
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHH
Confidence            4559999999999999999 444   4433332111111 1234999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +..+++.+|.|+||.|+|+||.++|..
T Consensus       123 ~~~mi~~~d~d~dg~i~f~ef~~~m~~  149 (151)
T KOG0027|consen  123 CKEMIREVDVDGDGKVNFEEFVKMMSG  149 (151)
T ss_pred             HHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence            999999999999999999999998853

>PTZ00183 centrin; Provisional

Probab=99.11  E-value=1e-09  Score=101.23  Aligned_cols=115  Identities=23%  Similarity=0.340  Sum_probs=88.8

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      +..+|..+|.+++|.|    +..++..++. .+....   +..+|+.+|.+++|.|+++||..++... ......++++.
T Consensus        19 ~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~-~~~~~~---~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   94 (158)
T PTZ00183         19 IREAFDLFDTDGSGTIDPKELKVAMRSLGF-EPKKEE---IKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILK   94 (158)
T ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHH
Confidence            8889999999999998    5555666554 344444   8899999999999999999999987653 44456678999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhccc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMV  244 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~  244 (547)
                      +|+.+|.|++|.|+.+||..++...+.....    ..+..++...|..
T Consensus        95 ~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~----~~~~~~~~~~d~~  138 (158)
T PTZ00183         95 AFRLFDDDKTGKISLKNLKRVAKELGETITD----EELQEMIDEADRN  138 (158)
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCC
Confidence            9999999999999999999999877654332    3455566555543

>PTZ00183 centrin; Provisional

Probab=99.06  E-value=1.3e-09  Score=100.60  Aligned_cols=97  Identities=20%  Similarity=0.330  Sum_probs=81.7

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcC---CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCS---VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~---~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      +..+|..+|.+++|.| +.++...+.   .......   .++.+|+.+|.+++|.|+.+||..++..++..++.+++..+
T Consensus        55 ~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~---~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~  131 (158)
T PTZ00183         55 IKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPRE---EILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEM  131 (158)
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHH---HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHH
Confidence            7889999999999999 555433221   1122233   38999999999999999999999999999988999999999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          198 FKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      |..+|.|++|.|+++||..++...
T Consensus       132 ~~~~d~~~~g~i~~~ef~~~~~~~  155 (158)
T PTZ00183        132 IDEADRNGDGEISEEEFYRIMKKT  155 (158)
T ss_pred             HHHhCCCCCCcCcHHHHHHHHhcc
Confidence            999999999999999999998653

>PTZ00184 calmodulin; Provisional

Probab=99.04  E-value=2.7e-09  Score=97.05  Aligned_cols=114  Identities=27%  Similarity=0.429  Sum_probs=87.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      +...|..+|.+++|.|    +..++..++. .+...+   +..+|+.+|.+++|.|+++||..++... ......+.+..
T Consensus        13 ~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~   88 (149)
T PTZ00184         13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAE---LQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKE   88 (149)
T ss_pred             HHHHHHHHcCCCCCcCCHHHHHHHHHHhCC-CCCHHH---HHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHH
Confidence            8889999999999999    5555555544 444444   8999999999999999999999998763 33455678899


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~  243 (547)
                      +|+.+|.|++|.|+.+||..++...+.....    .....++...|.
T Consensus        89 ~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~----~~~~~~~~~~d~  131 (149)
T PTZ00184         89 AFKVFDRDGNGFISAAELRHVMTNLGEKLTD----EEVDEMIREADV  131 (149)
T ss_pred             HHHhhCCCCCCeEeHHHHHHHHHHHCCCCCH----HHHHHHHHhcCC
Confidence            9999999999999999999999876543322    335555555543

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.00  E-value=2.3e-09  Score=94.84  Aligned_cols=113  Identities=25%  Similarity=0.289  Sum_probs=96.7

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCC--CCCcccHHHHHHHHHhcCC---cchH
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYN--QDGQLSFKEFSDLISAFGN---QVAA  191 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d--~dG~Is~~Ef~~~l~~lg~---~~~~  191 (547)
                      +++++|.+||..+||+|    .++++++++. +|++.+   +.+....++.+  +--.|+|++|.-++..+++   ..+-
T Consensus        12 e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~-nPT~ae---V~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~   87 (152)
T KOG0030|consen   12 EFKEAFLLFDRTGDGKISGSQVGDVLRALGQ-NPTNAE---VLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTY   87 (152)
T ss_pred             HHHHHHHHHhccCcccccHHHHHHHHHHhcC-CCcHHH---HHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcH
Confidence            39999999999999999    7889999986 899988   88888888887  5578999999999998754   3566


Q ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhh
Q 008959          192 NKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVA  241 (547)
Q Consensus       192 eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~  241 (547)
                      ++.-+-++.||++++|+|...||+++|..+|+...+    ..+.+.+...
T Consensus        88 edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~e----eEVe~Llag~  133 (152)
T KOG0030|consen   88 EDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTE----EEVEELLAGQ  133 (152)
T ss_pred             HHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccH----HHHHHHHccc
Confidence            788889999999999999999999999999998776    3455555433

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=2.5e-09  Score=96.91  Aligned_cols=95  Identities=18%  Similarity=0.367  Sum_probs=83.0

Q ss_pred             HHHHHHhhCCCCCchh-HHHHh----hhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKIS----LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll----~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +.++...+|.++.|.| +.++.    ..++. ..+.++   ++.+|+.+|.|++|.|++.+|..++..||++++++++++
T Consensus        71 i~kll~d~dk~~~g~i~fe~f~~~mt~k~~e-~dt~eE---i~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~e  146 (172)
T KOG0028|consen   71 ILKLLADVDKEGSGKITFEDFRRVMTVKLGE-RDTKEE---IKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELME  146 (172)
T ss_pred             HHHHHHhhhhccCceechHHHHHHHHHHHhc-cCcHHH---HHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHH
Confidence            7888999999999999 44433    33333 335666   999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          197 LFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      |++.+|.|+||.|+-+||.++|+.
T Consensus       147 MIeEAd~d~dgevneeEF~~imk~  170 (172)
T KOG0028|consen  147 MIEEADRDGDGEVNEEEFIRIMKK  170 (172)
T ss_pred             HHHHhcccccccccHHHHHHHHhc
Confidence            999999999999999999999865

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=98.97  E-value=1.9e-09  Score=85.04  Aligned_cols=61  Identities=23%  Similarity=0.490  Sum_probs=54.2

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchH----HHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAA----NKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~----eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      ++++|+.+|.|++|+|+.+||..++..++...+.    +.+..+|+.+|.|+||.|+++||.+++
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            7899999999999999999999999998865544    456666999999999999999999875

...

>PTZ00184 calmodulin; Provisional

Probab=98.96  E-value=3.8e-09  Score=96.08  Aligned_cols=99  Identities=14%  Similarity=0.323  Sum_probs=80.5

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK  199 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~  199 (547)
                      .+..+|..+|.+++|.+ +.+++..+............++.+|+.+|.+++|.|+.+||..++..++..++.+++..+|.
T Consensus        48 ~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~  127 (149)
T PTZ00184         48 ELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR  127 (149)
T ss_pred             HHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            38899999999999999 55554433211010111233899999999999999999999999999888889999999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHH
Q 008959          200 AADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      .+|.+++|.|+++||..++.
T Consensus       128 ~~d~~~~g~i~~~ef~~~~~  147 (149)
T PTZ00184        128 EADVDGDGQINYEEFVKMMM  147 (149)
T ss_pred             hcCCCCCCcCcHHHHHHHHh
Confidence            99999999999999998874

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.91  E-value=1.3e-08  Score=91.56  Aligned_cols=101  Identities=19%  Similarity=0.258  Sum_probs=75.6

Q ss_pred             hHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHH
Q 008959          119 SDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAAN  192 (547)
Q Consensus       119 ~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~e  192 (547)
                      |.+ +++.|+.+|.|+||.|    +...+.+++. .+++++   +..+++    ...|-|+|.-|+.++-. |....+++
T Consensus        30 QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk-~~~d~e---lDaM~~----Ea~gPINft~FLTmfGekL~gtdpe~  101 (171)
T KOG0031|consen   30 QIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGK-IASDEE---LDAMMK----EAPGPINFTVFLTMFGEKLNGTDPEE  101 (171)
T ss_pred             HHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCC-CCCHHH---HHHHHH----hCCCCeeHHHHHHHHHHHhcCCCHHH
Confidence            455 8999999999999999    8888888886 466666   666664    35677777777777755 55556667


Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcc
Q 008959          193 KKEELFKAADKNGDGVVSVDELAALLALQQEKEPL  227 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~  227 (547)
                      .+..+|+.||.+++|.|.-+.|+++|...+++...
T Consensus       102 ~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~  136 (171)
T KOG0031|consen  102 VILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTD  136 (171)
T ss_pred             HHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCH
Confidence            77777777777777777777777777777766554

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=98.89  E-value=6.2e-09  Score=87.38  Aligned_cols=67  Identities=19%  Similarity=0.207  Sum_probs=62.1

Q ss_pred             HHHHHHHHHhhcC-CCCCcccHHHHHHHHHh-cCCcchH-HHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVDY-NQDGQLSFKEFSDLISA-FGNQVAA-NKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D~-d~dG~Is~~Ef~~~l~~-lg~~~~~-eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...+..+|+.||. +++|+|+.+||..++.. +|..++. ++++++++.+|.|+||.|+|+||..++..+
T Consensus         7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022           7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3458999999999 99999999999999999 9988887 899999999999999999999999999775

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=98.88  E-value=8.7e-09  Score=98.10  Aligned_cols=101  Identities=21%  Similarity=0.385  Sum_probs=80.7

Q ss_pred             HHHHHHhhCCCCCch-h-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcch--HHH---
Q 008959          122 DSEVFDLLDPSSSNK-I-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVA--ANK---  193 (547)
Q Consensus       122 l~~~F~~~D~d~dG~-I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~--~ee---  193 (547)
                      ..++++.+|++++|. | +++++..+....+.......++-+|++||.+++|+|+.+|+..++.. ++...+  ++.   
T Consensus        68 ~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~  147 (187)
T KOG0034|consen   68 ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLED  147 (187)
T ss_pred             HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHH
Confidence            577889999988888 8 88777766654454444445899999999999999999999999988 454444  433   


Q ss_pred             -HHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          194 -KEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       194 -l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                       ++..|..+|.|+||+|+++||..++.+.+
T Consensus       148 i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P  177 (187)
T KOG0034|consen  148 IVDKTFEEADTDGDGKISFEEFCKVVEKQP  177 (187)
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHcCc
Confidence             56678999999999999999999997653

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=98.79  E-value=1.4e-08  Score=96.88  Aligned_cols=98  Identities=19%  Similarity=0.326  Sum_probs=74.6

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCC-CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----CC-------c
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVED-PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----GN-------Q  188 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~-~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g~-------~  188 (547)
                      ...+|..+|.|+||.| +.+++.++..-. -+.++  .++-+|+++|.|++|+|+.+|+..++..+    +.       .
T Consensus        66 ~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ee--kl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~  143 (193)
T KOG0044|consen   66 AELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEE--KLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEE  143 (193)
T ss_pred             HHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHH--HhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccc
Confidence            6789999999999999 666555443211 12222  26777999999999999999999988763    31       1


Q ss_pred             chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          189 VAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       189 ~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+++.+..+|+.+|.|+||.||++||.......
T Consensus       144 ~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d  176 (193)
T KOG0044|consen  144 TPEERVDKIFSKMDKNKDGKLTLEEFIEGCKAD  176 (193)
T ss_pred             cHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhC
Confidence            244568889999999999999999999887553

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=98.74  E-value=5.3e-08  Score=81.70  Aligned_cols=66  Identities=18%  Similarity=0.301  Sum_probs=60.8

Q ss_pred             HHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVD-YNQDG-QLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..++++|+.|| .|++| .|+.+||..+|..     +|...++++++++++.+|.|+||.|+|+||..++...
T Consensus         8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~   80 (88)
T cd05027           8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV   80 (88)
T ss_pred             HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            34899999998 79999 5999999999999     8888899999999999999999999999999998664

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=98.71  E-value=8.1e-08  Score=91.64  Aligned_cols=124  Identities=16%  Similarity=0.162  Sum_probs=90.8

Q ss_pred             HHHHHHhhCCCC-Cchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSS-SNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~-dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      ++..+.-|=.+- .|.+    +..+......   ......+.+.+|+.+|.|+||.|++.||..++..+-....++.++.
T Consensus        28 i~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp---~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w  104 (193)
T KOG0044|consen   28 IQQWYRGFKNECPSGRLTLEEFREIYASFFP---DGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKW  104 (193)
T ss_pred             HHHHHHHhcccCCCCccCHHHHHHHHHHHCC---CCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhh
Confidence            555555554332 5555    6666665542   2333445889999999999999999999999988766678889999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCc-------ccccchhHHHHHhhhcccCccc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEP-------LMNCCPVCGETLEVADMVNTMI  248 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~-------~~~~~~~~~~~l~~~D~~~~l~  248 (547)
                      +|+.+|.|+||+|+++|+..++...-....       +......+.+++++.|.+++..
T Consensus       105 ~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~  163 (193)
T KOG0044|consen  105 AFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGK  163 (193)
T ss_pred             hheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCc
Confidence            999999999999999999999988633221       2222234677788888776644

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.67  E-value=1.6e-07  Score=89.70  Aligned_cols=97  Identities=20%  Similarity=0.291  Sum_probs=71.9

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhc---CCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSC---SVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l---~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      +...|+..|.|..|.| -.++..++   .....+.+   .++.+..+||.+.+|+|.++||..++..+.      +++.+
T Consensus        59 ~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~---TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~------~Wr~v  129 (221)
T KOG0037|consen   59 LAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIE---TCRLMISMFDRDNSGTIGFKEFKALWKYIN------QWRNV  129 (221)
T ss_pred             HHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHH---HHHHHHHHhcCCCCCccCHHHHHHHHHHHH------HHHHH
Confidence            7778888888888888 33333333   22223333   378888888888888888888888887644      78888


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhccCcc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQEKEPL  227 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~  227 (547)
                      |+.+|+|++|.|+..||.+.+..+|...+.
T Consensus       130 F~~~D~D~SG~I~~sEL~~Al~~~Gy~Lsp  159 (221)
T KOG0037|consen  130 FRTYDRDRSGTIDSSELRQALTQLGYRLSP  159 (221)
T ss_pred             HHhcccCCCCcccHHHHHHHHHHcCcCCCH
Confidence            888888888888888888888888877654

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.66  E-value=1.3e-07  Score=80.24  Aligned_cols=66  Identities=23%  Similarity=0.281  Sum_probs=57.2

Q ss_pred             HHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-c----CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVD-YNQDG-QLSFKEFSDLISA-F----GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~-l----g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+.++|+.|| .|++| +|+.+||..++.. +    ....+..+++++++.+|.|+||.|+++||..++..+
T Consensus        10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026          10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            45788899999 78998 5999999999976 3    334467799999999999999999999999999775

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>smart00027 EH Eps15 homology domain

Probab=98.65  E-value=1.4e-07  Score=80.42  Aligned_cols=70  Identities=23%  Similarity=0.313  Sum_probs=63.0

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+.++...++.+|+.+|.|++|.|+.+|+..++...+  .+.++++++|..+|.+++|.|+++||..++...
T Consensus         4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~   73 (96)
T smart00027        4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLI   73 (96)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            3456667799999999999999999999999998876  688899999999999999999999999988664

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.63  E-value=1.9e-07  Score=89.15  Aligned_cols=91  Identities=15%  Similarity=0.259  Sum_probs=81.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      .+.+..+||.+.+|+|    |..+...+.          .|+.+|+.+|.|++|.|+..||.++|..+|-.++++-..-+
T Consensus        96 crlmI~mfd~~~~G~i~f~EF~~Lw~~i~----------~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~l  165 (221)
T KOG0037|consen   96 CRLMISMFDRDNSGTIGFKEFKALWKYIN----------QWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLL  165 (221)
T ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHHHHH----------HHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHH
Confidence            6788899999999999    444544432          29999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ++++|..++|.|.+++|.+++..+.
T Consensus       166 v~kyd~~~~g~i~FD~FI~ccv~L~  190 (221)
T KOG0037|consen  166 VRKYDRFGGGRIDFDDFIQCCVVLQ  190 (221)
T ss_pred             HHHhccccCCceeHHHHHHHHHHHH
Confidence            9999998899999999999986653

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.61  E-value=1.8e-07  Score=79.44  Aligned_cols=65  Identities=25%  Similarity=0.267  Sum_probs=58.4

Q ss_pred             HHHHHHHhhcC-CC-CCcccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          157 FARRILSIVDY-NQ-DGQLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       157 ~l~~~f~~~D~-d~-dG~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+..+|..+|. |+ +|.|+.+||..++..     +|...++++++.+|+.+|.|++|.|+++||.+++...
T Consensus         9 ~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~   80 (94)
T cd05031           9 SLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL   80 (94)
T ss_pred             HHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            48899999997 97 699999999999986     4567788999999999999999999999999998664

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.59  E-value=2.2e-07  Score=77.94  Aligned_cols=68  Identities=22%  Similarity=0.302  Sum_probs=60.7

Q ss_pred             HHHHHHHHHhhcC-CC-CCcccHHHHHHHHH---hcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          155 KSFARRILSIVDY-NQ-DGQLSFKEFSDLIS---AFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       155 ~~~l~~~f~~~D~-d~-dG~Is~~Ef~~~l~---~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ...+-.+|..||. |+ +|+|+.+||..++.   .+|...+++++.++|+.+|.|++|.|+|+||..++..+.
T Consensus         9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~   81 (88)
T cd05029           9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA   81 (88)
T ss_pred             HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence            3457789999998 77 89999999999996   368889999999999999999999999999999997753

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.59  E-value=2.6e-07  Score=78.13  Aligned_cols=66  Identities=29%  Similarity=0.426  Sum_probs=58.3

Q ss_pred             HHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-cCC----cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVD-YNQDG-QLSFKEFSDLISA-FGN----QVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~-lg~----~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.++++|+.|| .+++| .|+..||..++.. +|.    ..++++++++|+.+|.|++|.|+++||..++..+
T Consensus         9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~   81 (92)
T cd05025           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (92)
T ss_pred             HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            44899999997 99999 5999999999975 543    4578899999999999999999999999999765

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=98.56  E-value=1.6e-07  Score=70.95  Aligned_cols=52  Identities=29%  Similarity=0.630  Sum_probs=48.7

Q ss_pred             CCCcccHHHHHHHHHhcCCc-chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          169 QDGQLSFKEFSDLISAFGNQ-VAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       169 ~dG~Is~~Ef~~~l~~lg~~-~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+|.|+.+||..++..+|.. ++++++..+|..+|.|++|+|+++||.+++..
T Consensus         1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen    1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            47999999999999878988 99999999999999999999999999999864

...

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.56  E-value=2.9e-07  Score=77.01  Aligned_cols=69  Identities=20%  Similarity=0.268  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHhhcC--CCCCcccHHHHHHHHHh-cCCcc----hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          153 TEKSFARRILSIVDY--NQDGQLSFKEFSDLISA-FGNQV----AANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       153 ~e~~~l~~~f~~~D~--d~dG~Is~~Ef~~~l~~-lg~~~----~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++.+.++.+|..+|.  |++|.|+.+||..++.. +|...    +.++++.++..+|.+++|.|+++||..++...
T Consensus         5 ~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213           5 KAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            344558999999999  89999999999999976 55443    48899999999999999999999999998764

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.56  E-value=6.6e-07  Score=92.37  Aligned_cols=93  Identities=22%  Similarity=0.393  Sum_probs=53.6

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      ...+|...|.|.||.+ +.++...+..   .+.+   +.++|+..|.++||.|+.+|+...+..+|.+++++++..+|+.
T Consensus        53 ~~~l~~~~d~~~dg~vDy~eF~~Y~~~---~E~~---l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~  126 (463)
T KOG0036|consen   53 AKMLFSAMDANRDGRVDYSEFKRYLDN---KELE---LYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEH  126 (463)
T ss_pred             HHHHHHhcccCcCCcccHHHHHHHHHH---hHHH---HHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHH
Confidence            4455555555555555 4444443321   1222   5556666666666666666666666666666666666666666


Q ss_pred             hcCCCCCCcCHHHHHHHHHh
Q 008959          201 ADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +|+|+++.|+++|+++.+.-
T Consensus       127 ~d~~g~~~I~~~e~rd~~ll  146 (463)
T KOG0036|consen  127 MDKDGKATIDLEEWRDHLLL  146 (463)
T ss_pred             hccCCCeeeccHHHHhhhhc
Confidence            66666666666666665543

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.55  E-value=2.9e-07  Score=72.27  Aligned_cols=61  Identities=23%  Similarity=0.363  Sum_probs=55.6

Q ss_pred             HHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       159 ~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.+|+.+|.|++|.|+.+|+..++..+|  .+.++++++|+.+|.+++|.|+++||..++...
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~   62 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI   62 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            5689999999999999999999999887  478899999999999999999999999988653

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]

Probab=98.50  E-value=1e-07  Score=87.89  Aligned_cols=52  Identities=19%  Similarity=0.293  Sum_probs=46.4

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ..++|+|+|+|+.|.      +..++|||+++..|+|.-||+++++++||+||+.+.+
T Consensus         2 ~~~vGLL~v~v~~g~~L~~rD~~~sSDPyVVl~lg~q~lkT~~v~~n~NPeWNe~ltf   59 (168)
T KOG1030|consen    2 EMLVGLLRVRVKRGKNLAIRDFLGSSDPYVVLELGNQKLKTRVVYKNLNPEWNEELTF   59 (168)
T ss_pred             CccceEEEEEEEeecCeeeeccccCCCCeEEEEECCeeeeeeeecCCCCCcccceEEE
Confidence            357899999999993      5699999999999999999999999999999994433

>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip)

Probab=98.50  E-value=1e-07  Score=84.88  Aligned_cols=51  Identities=20%  Similarity=0.318  Sum_probs=45.0

Q ss_pred             eeEEEEEEeeccc-----ccCCceEEEEEcccceEeeeecCC-CCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAEM-----KFKDKWLACVSLGEQTCRTAISDN-TDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~~-----~~~dd~~~~v~~g~~~frT~vi~~-tLnP~Wne~~kll~  103 (547)
                      .|.|+|+|++|+.     .+++||||++++|++.+||+++.+ ++||+|||.+.+.+
T Consensus         1 ~g~L~v~v~~Ak~l~~~~~g~sDPYv~i~lg~~~~kT~v~~~~~~nP~WNe~F~f~v   57 (121)
T cd04016           1 VGRLSITVVQAKLVKNYGLTRMDPYCRIRVGHAVYETPTAYNGAKNPRWNKTIQCTL   57 (121)
T ss_pred             CcEEEEEEEEccCCCcCCCCCCCceEEEEECCEEEEeEEccCCCCCCccCeEEEEEe
Confidence            4899999999962     378999999999999999999876 79999999777765

Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=98.49  E-value=4.7e-07  Score=68.65  Aligned_cols=61  Identities=25%  Similarity=0.561  Sum_probs=57.5

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      +..+|..+|.+++|.|+++||..++..++...+.+.+..+|+.+|.+++|.|+++||..++
T Consensus         2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            5778999999999999999999999999988999999999999999999999999998865

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.43  E-value=1.1e-06  Score=73.78  Aligned_cols=67  Identities=22%  Similarity=0.251  Sum_probs=57.8

Q ss_pred             HHHHHHHHHh-hcCCCCC-cccHHHHHHHHHhc-----CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSI-VDYNQDG-QLSFKEFSDLISAF-----GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~-~D~d~dG-~Is~~Ef~~~l~~l-----g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...|..+|+. +|.+++| .|+.+||..++...     +....+.++.++++.+|.|+||.|+|+||.+++..+
T Consensus         8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l   81 (89)
T cd05023           8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL   81 (89)
T ss_pred             HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            3458889998 7888986 99999999999874     345567899999999999999999999999999765

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=98.38  E-value=7.8e-07  Score=69.96  Aligned_cols=61  Identities=21%  Similarity=0.333  Sum_probs=48.5

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      ++++|+.+|.|++|.|    +..++..+....+...-...++.+|+.+|.|+||.|+++||..++
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            5789999999999999    666666665422233334568888999999999999999999875

...

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.35  E-value=1.4e-06  Score=90.05  Aligned_cols=149  Identities=19%  Similarity=0.205  Sum_probs=107.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++.+|+.+|.+++|.+    +.+.+.++....+...-   ...+|+..|.|.||.++++||...+..     .+.++..+
T Consensus        16 ~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~---~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----~E~~l~~~   87 (463)
T KOG0036|consen   16 IRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEA---AKMLFSAMDANRDGRVDYSEFKRYLDN-----KELELYRI   87 (463)
T ss_pred             HHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHH---HHHHHHhcccCcCCcccHHHHHHHHHH-----hHHHHHHH
Confidence            8999999999999999    44455666653333333   788999999999999999999999964     66789999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCccc-ccccccc------cC----C--------
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMI-HLTLCFD------EG----T--------  258 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l~-~~a~c~~------~~----~--------  258 (547)
                      |+..|.+.||.|+.+|+.+.+.+++.+..++    ...++++.+|..+..+ ++..+.+      +.    +        
T Consensus        88 F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de----~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p~s~i~di~~~W~h~~  163 (463)
T KOG0036|consen   88 FQSIDLEHDGKIDPNEIWRYLKDLGIQLSDE----KAAKFFEHMDKDGKATIDLEEWRDHLLLYPESDLEDIYDFWRHVL  163 (463)
T ss_pred             HhhhccccCCccCHHHHHHHHHHhCCccCHH----HHHHHHHHhccCCCeeeccHHHHhhhhcCChhHHHHHHHhhhhhe
Confidence            9999999999999999999999998876653    3344555555443332 2111110      00    0        


Q ss_pred             -----CccccccCcccccchhhHHHhhhc
Q 008959          259 -----GNQVMTGGFLTDKQASNVWMFKLS  282 (547)
Q Consensus       259 -----~~~i~~~gf~~~~~a~~~w~~k~l  282 (547)
                           .+.....|+......+-.|..-++
T Consensus       164 ~idigE~~~iPdg~s~~e~~~g~ww~~li  192 (463)
T KOG0036|consen  164 LIDIGEDAVLPDGDSKLENDSGRWWGFLI  192 (463)
T ss_pred             EEEccccccCCcchHHHHhcccchhhhhc
Confidence                 123344777777777888877766

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=98.35  E-value=2.8e-06  Score=81.08  Aligned_cols=121  Identities=24%  Similarity=0.303  Sum_probs=89.6

Q ss_pred             HHHHHHhhCCC-CCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCc-ccHHHHHHHHHhcCCcc-hHHHHHHH
Q 008959          122 DSEVFDLLDPS-SSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQ-LSFKEFSDLISAFGNQV-AANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d-~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~-Is~~Ef~~~l~~lg~~~-~~eel~~~  197 (547)
                      +...|..+|.+ ++|.+ ..++....     ......+..+++..+|.+++|. |+++||..++...-... ..++++-+
T Consensus        35 L~~rF~kl~~~~~~g~lt~eef~~i~-----~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~fa  109 (187)
T KOG0034|consen   35 LYERFKKLDRNNGDGYLTKEEFLSIP-----ELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFA  109 (187)
T ss_pred             HHHHHHHhccccccCccCHHHHHHHH-----HHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHH
Confidence            88999999999 89988 44443322     1122233678899999999998 99999999999865544 44599999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhcc-Cc--ccccchhHHHHHhhhcccCcc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQEK-EP--LMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~~-~~--~~~~~~~~~~~l~~~D~~~~l  247 (547)
                      |+.||.+++|+|+.+|+.+++..+-.. ..  +......+.+.+.+.|.+++.
T Consensus       110 F~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG  162 (187)
T KOG0034|consen  110 FRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDG  162 (187)
T ss_pred             HHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999887542 22  111113466677788876654

>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD)

Probab=98.33  E-value=5.5e-07  Score=78.51  Aligned_cols=48  Identities=21%  Similarity=0.410  Sum_probs=42.1

Q ss_pred             eEEEEEEeecc-c---------ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHH
Q 008959           54 GIALLTLISAE-M---------KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        54 gi~~i~~~~A~-~---------~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      |||.|+|++|+ +         +++.|||+++.+|.+.+||+++++++||+|||.+..
T Consensus         1 g~l~v~v~~A~~L~~~~~~~~~~~~~DPYv~v~~~~~~~kT~v~~~t~nPvWne~f~f   58 (108)
T cd04039           1 GVVFMEIKSITDLPPLKNMTRTGFDMDPFVIISFGRRVFRTSWRRHTLNPVFNERLAF   58 (108)
T ss_pred             CEEEEEEEeeeCCCCccccCCCCCccCceEEEEECCEeEeeeeecCCCCCcccceEEE
Confidence            89999999995 1         135799999999999999999999999999996544

PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=98.31  E-value=2.4e-06  Score=75.30  Aligned_cols=60  Identities=25%  Similarity=0.377  Sum_probs=53.1

Q ss_pred             HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      ...+..+|..+|.|+||.|+.+|+..+.  ++  ..+..+..+|+.+|.|+||.||++||...+
T Consensus        47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~--~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl  106 (116)
T cd00252          47 KDPVGWMFNQLDGNYDGKLSHHELAPIR--LD--PNEHCIKPFFESCDLDKDGSISLDEWCYCF  106 (116)
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc--chHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            3448999999999999999999999876  22  456678899999999999999999999998

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=98.30  E-value=4.3e-06  Score=75.61  Aligned_cols=66  Identities=14%  Similarity=0.377  Sum_probs=58.3

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+++++|.++|.|+||.|+.+++..++.++|...+++++..|++..    .|-|+|--|..++.+-
T Consensus        28 q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGek   93 (171)
T KOG0031|consen   28 QSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEK   93 (171)
T ss_pred             HHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHH
Confidence            44556699999999999999999999999999999999999999999864    5789999998888653

>cd08375 C2_Intersectin C2 domain present in Intersectin

Probab=98.29  E-value=6.7e-07  Score=81.30  Aligned_cols=51  Identities=24%  Similarity=0.406  Sum_probs=45.4

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +|.|+|+|++|+      ..+..|||+++.+|.+.+||+++++++||.||+.+...+
T Consensus        14 ~G~L~V~Vi~A~~L~~~d~~g~~DPYv~v~~~~~~~kT~vi~~t~nP~Wne~f~f~v   70 (136)
T cd08375          14 IGRLMVVIVEGRDLKPCNSNGKSDPYCEVSMGSQEHKTKVVSDTLNPKWNSSMQFFV   70 (136)
T ss_pred             cEEEEEEEEEeeCCCCCCCCCCcCcEEEEEECCEeeeccccCCCCCCccCceEEEEe
Confidence            599999999995      367899999999999999999999999999999655544

A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro

>cd04032 C2_Perforin C2 domain of Perforin

Probab=98.28  E-value=1e-06  Score=79.15  Aligned_cols=60  Identities=18%  Similarity=0.171  Sum_probs=52.0

Q ss_pred             ccccccccccceeEEEEEEeecc-----cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHH
Q 008959           42 HHNRVLNEEDFAGIALLTLISAE-----MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        42 ~~~~~~~~~~~~gi~~i~~~~A~-----~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ..+.-.+++.-+|.|+|+|++|+     ..+..|||+.+.++++..||+++++++||+|||.+.+
T Consensus        16 ~~~~~~~~~~~~~~L~V~V~~A~~L~~d~~g~~DPYVkV~~~~~~~kT~vi~~t~nPvWNE~F~f   80 (127)
T cd04032          16 VNSNCCPTRRGLATLTVTVLRATGLWGDYFTSTDGYVKVFFGGQEKRTEVIWNNNNPRWNATFDF   80 (127)
T ss_pred             cCCCcCcCcCCcEEEEEEEEECCCCCcCcCCCCCeEEEEEECCccccCceecCCCCCcCCCEEEE
Confidence            44566778999999999999996     2457899999999999999999999999999996654

Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few

>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset

Probab=98.13  E-value=1.6e-06  Score=77.80  Aligned_cols=49  Identities=16%  Similarity=0.325  Sum_probs=43.4

Q ss_pred             EEEEEEeecc----c-----ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           55 IALLTLISAE----M-----KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~----~-----~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +|.|+|++|+    +     .+++||||++.+|.+.+||+++++++||+|||.+.+.+
T Consensus         1 ~L~v~v~~A~~~~~l~~~d~~g~sDPYv~i~~g~~~~rTk~~~~~~nP~WnE~f~f~v   58 (126)
T cd08379           1 ILEVGILGAQGLDVLRAKDGRGSTDAYCVAKYGPKWVRTRTVEDSSNPRWNEQYTWPV   58 (126)
T ss_pred             CeEEEEEEeECCccccccccCCCCCeeEEEEECCEEeEcCcccCCCCCcceeEEEEEe
Confidence            5788889886    3     57889999999999999999999999999999777765

MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=98.08  E-value=1.4e-05  Score=66.96  Aligned_cols=66  Identities=21%  Similarity=0.319  Sum_probs=56.9

Q ss_pred             HHHHHHHHhhcCC--CCCcccHHHHHHHHH-hcCCcch----HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVDYN--QDGQLSFKEFSDLIS-AFGNQVA----ANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D~d--~dG~Is~~Ef~~~l~-~lg~~~~----~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+...|..++..  .+|.|+.+||..++. .++..++    ++++..+|+.+|.|++|.|+++||..++...
T Consensus         8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~   80 (88)
T cd05030           8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV   80 (88)
T ss_pred             HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            3477889999866  479999999999997 4666566    8899999999999999999999999999764

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=98.07  E-value=3.8e-06  Score=55.24  Aligned_cols=27  Identities=30%  Similarity=0.617  Sum_probs=15.3

Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++++|+.+|+|+||+|+++||.++|++
T Consensus         2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~   28 (29)
T PF00036_consen    2 LKEAFREFDKDGDGKIDFEEFKEMMKK   28 (29)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence            455555555555555555555555543

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=98.07  E-value=7.4e-06  Score=68.82  Aligned_cols=60  Identities=20%  Similarity=0.233  Sum_probs=50.0

Q ss_pred             HHHHHHhhCC-CCCchh----HHHHhhh-cCCCCCCh-HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDP-SSSNKI----VGKISLS-CSVEDPIE-TEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~-d~dG~I----l~~ll~~-l~~~~~~~-~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|..||. +++|.|    ++.++.. ++. ..+. .+   ++.+++.+|.|+||.|+|+||..++..+
T Consensus        10 l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~---v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022          10 LVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEG---LEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHH---HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            8899999999 999999    6677766 543 2333 44   9999999999999999999999998764

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PF14658 EF-hand_9: EF-hand domain

Probab=98.05  E-value=1.2e-05  Score=63.03  Aligned_cols=61  Identities=16%  Similarity=0.335  Sum_probs=55.4

Q ss_pred             HHHHhhcCCCCCcccHHHHHHHHHhcCC-cchHHHHHHHHHHhcCCCC-CCcCHHHHHHHHHh
Q 008959          160 RILSIVDYNQDGQLSFKEFSDLISAFGN-QVAANKKEELFKAADKNGD-GVVSVDELAALLAL  220 (547)
Q Consensus       160 ~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~~~eel~~~F~~~D~d~d-G~Is~~Ef~~~l~~  220 (547)
                      .+|.+||.++.|.|...++..+|++++. ..++.+++.+.+.+|+++. |.|+++.|..+|++
T Consensus         2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~   64 (66)
T PF14658_consen    2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD   64 (66)
T ss_pred             cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence            3689999999999999999999999887 7788899999999999997 99999999999875

>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins

Probab=98.01  E-value=4.6e-06  Score=73.51  Aligned_cols=50  Identities=24%  Similarity=0.408  Sum_probs=43.8

Q ss_pred             eEEEEEEeecc-c-----------ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           54 GIALLTLISAE-M-----------KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        54 gi~~i~~~~A~-~-----------~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|+|++|+ +           .+..|||+++.++++.+||++++++++|+||+.+...+
T Consensus         1 g~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~~~~kT~~~~~t~~P~W~e~f~~~v   62 (121)
T cd08391           1 GVLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGAQTFKSKVIKENLNPKWNEVYEAVV   62 (121)
T ss_pred             CeEEEEEEEccCCcccccccccCCCCCcCCEEEEEECCEeEEccccCCCCCCcccceEEEEe
Confidence            89999999995 1           24789999999999999999999999999999766554

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular

>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP)

Probab=97.99  E-value=5.6e-06  Score=76.10  Aligned_cols=51  Identities=20%  Similarity=0.402  Sum_probs=44.4

Q ss_pred             eeEEEEEEeecc-c----ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE-M----KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~-~----~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +|.|+|+|++|+ +    ...+|||+++++|++..||+++++++||+|||.+.+.+
T Consensus         1 ~G~L~V~Vi~a~nL~~~d~~~sDPYV~v~~g~~~~kT~vvk~t~nP~WnE~f~f~i   56 (145)
T cd04038           1 LGLLKVRVVRGTNLAVRDFTSSDPYVVLTLGNQKVKTRVIKKNLNPVWNEELTLSV   56 (145)
T ss_pred             CeEEEEEEEeeECCCCCCCCCcCcEEEEEECCEEEEeeeEcCCCCCeecccEEEEe
Confidence            499999999994 1    36889999999999999999999999999999555544

ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i

>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins

Probab=97.99  E-value=4.7e-06  Score=72.00  Aligned_cols=50  Identities=18%  Similarity=0.377  Sum_probs=44.1

Q ss_pred             EEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHHh
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLE  104 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~e  104 (547)
                      .|.|+|++|+      ..+..||||++.+|++..||+++++++||+|||.+...+.
T Consensus         1 ~L~V~v~~A~~L~~~~~~~~~dpyv~v~~~~~~~kT~v~~~t~nP~Wne~f~f~v~   56 (105)
T cd04050           1 LLFVYLDSAKNLPLAKSTKEPSPYVELTVGKTTQKSKVKERTNNPVWEEGFTFLVR   56 (105)
T ss_pred             CEEEEEeeecCCCCcccCCCCCcEEEEEECCEEEeCccccCCCCCcccceEEEEeC
Confidence            3789999994      4678999999999999999999999999999997766663

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=97.98  E-value=1.7e-05  Score=66.50  Aligned_cols=59  Identities=15%  Similarity=0.298  Sum_probs=50.4

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.++|+.|| .|++| .|    ++.++..     ++. .+++++   +.++++.+|.|++|.|+|+||..++..
T Consensus        10 l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~-~~~~~~---v~~~i~~~D~n~dG~v~f~eF~~li~~   79 (88)
T cd05027          10 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE-IKEQEV---VDKVMETLDSDGDGECDFQEFMAFVAM   79 (88)
T ss_pred             HHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcC-CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            889999998 79999 58    7777776     554 566666   899999999999999999999998865

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins

Probab=97.98  E-value=5.8e-06  Score=73.68  Aligned_cols=50  Identities=28%  Similarity=0.339  Sum_probs=44.3

Q ss_pred             eEEEEEEeecc------c--ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           54 GIALLTLISAE------M--KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        54 gi~~i~~~~A~------~--~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|+|++|+      .  .+..|||+++.+|.+.+||++++++++|+||+.+...+
T Consensus         1 g~l~v~v~~a~~L~~~~~~~~~~~dPyv~v~~~~~~~kT~~~~~t~~P~Wne~f~~~~   58 (128)
T cd04024           1 GVLRVHVVEAKDLAAKDRSGKGKSDPYAILSVGAQRFKTQTIPNTLNPKWNYWCEFPI   58 (128)
T ss_pred             CEEEEEEEEeeCCCcccCCCCCCcCCeEEEEECCEEEecceecCCcCCccCCcEEEEe
Confidence            89999999995      3  46789999999999999999999999999999666544

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=97.98  E-value=1.9e-05  Score=70.74  Aligned_cols=98  Identities=14%  Similarity=0.331  Sum_probs=72.1

Q ss_pred             HHHHHHhhCCCCCchh-HHHHh---hhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC-CcchHHH---
Q 008959          122 DSEVFDLLDPSSSNKI-VGKIS---LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG-NQVAANK---  193 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll---~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-~~~~~ee---  193 (547)
                      -+++.+.|-.||.|.+ +..++   .-+....|-+..   +..+|+.+|-|+|+.|.-.++...+..+. ..+++++   
T Consensus        73 k~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK---~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~  149 (189)
T KOG0038|consen   73 KRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLK---AKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVEL  149 (189)
T ss_pred             HHHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhh---hhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHH
Confidence            3456677888999988 44333   222211232333   77899999999999999999999998864 3466665   


Q ss_pred             -HHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          194 -KEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       194 -l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                       ++.+++.+|.|+||+|++.||..++...+
T Consensus       150 i~ekvieEAD~DgDgkl~~~eFe~~i~raP  179 (189)
T KOG0038|consen  150 ICEKVIEEADLDGDGKLSFAEFEHVILRAP  179 (189)
T ss_pred             HHHHHHHHhcCCCCCcccHHHHHHHHHhCc
Confidence             46678889999999999999999886644

>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I

Probab=97.97  E-value=5.7e-06  Score=73.91  Aligned_cols=48  Identities=21%  Similarity=0.426  Sum_probs=41.9

Q ss_pred             EEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|++|+      ..+.+||||.+.+|.+.+||+++++++||+|||.+...+
T Consensus         1 ~~V~V~~A~~L~~~d~~g~~dpYv~v~l~~~~~kT~v~~~t~nP~Wne~f~F~v   54 (126)
T cd08682           1 VQVTVLQARGLLCKGKSGTNDAYVIIQLGKEKYSTSVKEKTTSPVWKEECSFEL   54 (126)
T ss_pred             CEEEEEECcCCcCCCCCcCCCceEEEEECCeeeeeeeecCCCCCEeCceEEEEe
Confidence            589999995      366889999999999999999999999999999655444

Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member

>cd04041 C2A_fungal C2 domain first repeat; fungal group

Probab=97.97  E-value=6e-06  Score=72.11  Aligned_cols=49  Identities=20%  Similarity=0.304  Sum_probs=41.3

Q ss_pred             eEEEEEEeecc------cc-cCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHHH
Q 008959           54 GIALLTLISAE------MK-FKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        54 gi~~i~~~~A~------~~-~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      |+|+|+|++|+      .. ++.|||+++.+   |...+||+++++++||+||+.+...
T Consensus         1 G~L~V~v~~a~~L~~~d~~~~~~Dpyv~v~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~   59 (111)
T cd04041           1 GVLVVTIHRATDLPKADFGTGSSDPYVTASFAKFGKPLYSTRIIRKDLNPVWEETWFVL   59 (111)
T ss_pred             CEEEEEEEEeeCCCcccCCCCCCCccEEEEEccCCCccEeeeeECCCCCCccceeEEEE
Confidence            89999999995      23 68899999987   4568999999999999999966543

C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]

Probab=97.96  E-value=2.8e-05  Score=82.50  Aligned_cols=125  Identities=14%  Similarity=0.141  Sum_probs=95.3

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCc---chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccC
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQ---VAANKKEELFKAADKNGDGVVSVDELAALLALQQEKE  225 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~---~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~  225 (547)
                      ..+.+|...+++.|...| |++|+|+..|+..++...+..   ...+++++++...+.|.+|.|+++||..++..+....
T Consensus        12 ~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s~~   90 (627)
T KOG0046|consen   12 QLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKSKD   90 (627)
T ss_pred             cccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhhhh
Confidence            456777778999999999 999999999999999886543   4578999999999999999999999999886654432


Q ss_pred             cccccchhHHHHHhhhcccCcccccccccccCCCccccccCcccccchhhHHHhhhcc-cccccc
Q 008959          226 PLMNCCPVCGETLEVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSE-WGHFSS  289 (547)
Q Consensus       226 ~~~~~~~~~~~~l~~~D~~~~l~~~a~c~~~~~~~~i~~~gf~~~~~a~~~w~~k~l~-~~~~~~  289 (547)
                      ..        + +.  ........+...+++++.|.+    ..+++.+|.+|+|+.|+ ..-...
T Consensus        91 ~~--------k-~~--~g~~~~~~~~~~sst~~~Hti----~eeEk~~fv~hIN~~L~~Dpdl~~  140 (627)
T KOG0046|consen   91 IA--------K-IG--EGIKAASGTLKGSSTGTQHTI----NEEEKRAFVNHINSYLEGDPDLKH  140 (627)
T ss_pred             hh--------h-hc--CCcccccceeecccccceeee----cHHHHHHHHHHHHHHhcCCcchhh
Confidence            11        0 11  111122344555677889999    89999999999999996 433333

>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins

Probab=97.95  E-value=5.7e-06  Score=72.82  Aligned_cols=50  Identities=18%  Similarity=0.302  Sum_probs=42.9

Q ss_pred             eEEEEEEeecc------cccCCceEEEEEcccceEeeeecC-CCCCCCchhhHHHHH
Q 008959           54 GIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISD-NTDKPIWNSEKKLLL  103 (547)
Q Consensus        54 gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~-~tLnP~Wne~~kll~  103 (547)
                      |.|+|+|++|+      ..+++|||+++.++.+..||+++. +++||+|||.+...+
T Consensus         1 g~L~V~v~~A~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v   57 (118)
T cd08681           1 GTLVVVVLKARNLPNKRKLDKQDPYCVLRIGGVTKKTKTDFRGGQHPEWDEELRFEI   57 (118)
T ss_pred             CEEEEEEEEccCCCCCCcCCCCCceEEEEECCCccccccccCCCCCCccCceEEEEe
Confidence            78999999995      366889999999999999999885 579999999665544

Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]

Probab=97.95  E-value=2.7e-05  Score=73.34  Aligned_cols=71  Identities=17%  Similarity=0.278  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          153 TEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       153 ~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      .+.+.+..+|+.+|.+.||+|++.|+..+|..+|.+.+.--++.|++..|.|.||+||+-||.=+++....
T Consensus        96 kqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaa  166 (244)
T KOG0041|consen   96 KQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA  166 (244)
T ss_pred             HHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence            34455788999999999999999999999999999888888999999999999999999999998877543

>cd04046 C2_Calpain C2 domain present in Calpain proteins

Probab=97.88  E-value=1.4e-05  Score=71.51  Aligned_cols=49  Identities=12%  Similarity=0.146  Sum_probs=43.3

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .+||+|+|++|+      ..+..|||+++..+.+.+||++++++++|+||+.+..
T Consensus         2 ~~~~~V~v~~A~~L~~~d~~g~~dPyv~v~~~~~~~kT~v~~~t~nP~Wne~f~f   56 (126)
T cd04046           2 QVVTQVHVHSAEGLSKQDSGGGADPYVIIKCEGESVRSPVQKDTLSPEFDTQAIF   56 (126)
T ss_pred             cEEEEEEEEeCcCCCCCCCCCCcCccEEEEECCEEEEeCccCCCCCCcccceEEE
Confidence            368999999995      3468999999999999999999999999999996544

A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.88  E-value=4.2e-05  Score=77.23  Aligned_cols=98  Identities=24%  Similarity=0.348  Sum_probs=71.7

Q ss_pred             HHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcc-h---HHHHHH
Q 008959          123 SEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQV-A---ANKKEE  196 (547)
Q Consensus       123 ~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~-~---~eel~~  196 (547)
                      ++.|+..|.|+||.+ +.++...+..+.......-.++..+.-.|+|+||+|+++||..=|.. -+... +   ..+-.+
T Consensus       166 e~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~  245 (325)
T KOG4223|consen  166 EERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQ  245 (325)
T ss_pred             HHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHHH
Confidence            678999999999998 66666655433222222334677888899999999999999886655 33111 1   124557


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          197 LFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++...|+|+||+++-+|+.+.+.-
T Consensus       246 F~~~~DknkDG~L~~dEl~~WI~P  269 (325)
T KOG4223|consen  246 FFEFRDKNKDGKLDGDELLDWILP  269 (325)
T ss_pred             HHHHhhcCCCCccCHHHHhcccCC
Confidence            888899999999999999987743

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=97.87  E-value=1.7e-05  Score=52.14  Aligned_cols=28  Identities=21%  Similarity=0.581  Sum_probs=26.0

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++.+|+.+|.|+||+|+++||..++..+
T Consensus         2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L   29 (29)
T PF00036_consen    2 LKEAFREFDKDGDGKIDFEEFKEMMKKL   29 (29)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence            7899999999999999999999999764

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=97.85  E-value=3.2e-05  Score=65.51  Aligned_cols=61  Identities=18%  Similarity=0.272  Sum_probs=47.0

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhhcC----CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLSCS----VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~l~----~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +.++|+.|| .|++| +|    +..++....    ....+..+   +.++++.+|.|++|.|+++||..++..+
T Consensus        12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~---v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026          12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPML---VDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHH---HHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            778899999 78998 47    666654421    11233444   9999999999999999999999999764

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.85  E-value=3.6e-05  Score=77.70  Aligned_cols=95  Identities=22%  Similarity=0.259  Sum_probs=73.9

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCC---CC-hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVED---PI-ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~---~~-~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +.+.....|+|+||+| +.+++.-+....   .. +.-..+-.+.+...|.|+||+++-+|+...+..-+......+.+.
T Consensus       202 i~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~h  281 (325)
T KOG4223|consen  202 IAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARH  281 (325)
T ss_pred             HHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHH
Confidence            6778889999999999 555444332211   11 111223457888999999999999999988877677788899999


Q ss_pred             HHHHhcCCCCCCcCHHHHHH
Q 008959          197 LFKAADKNGDGVVSVDELAA  216 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~  216 (547)
                      ++...|.|+||++|++|+..
T Consensus       282 L~~eaD~dkD~kLs~eEIl~  301 (325)
T KOG4223|consen  282 LLHEADEDKDGKLSKEEILE  301 (325)
T ss_pred             HhhhhccCccccccHHHHhh
Confidence            99999999999999999875

>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset

Probab=97.83  E-value=1.4e-05  Score=73.98  Aligned_cols=49  Identities=27%  Similarity=0.346  Sum_probs=42.6

Q ss_pred             EEEEEEeecc------cccCCceEEEEEcccceEeeeecCC-CCCCCchhhHHHHH
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDN-TDKPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~-tLnP~Wne~~kll~  103 (547)
                      .|+|+|++|+      ..+++||||++.+|.+..||+++.+ ++||+|||.+.+.+
T Consensus         1 ~L~V~Vi~A~~L~~~d~~g~sDPYV~v~l~~~~~kTk~~~~~t~nP~WNE~F~f~v   56 (150)
T cd04019           1 YLRVTVIEAQDLVPSDKNRVPEVFVKAQLGNQVLRTRPSQTRNGNPSWNEELMFVA   56 (150)
T ss_pred             CEEEEEEEeECCCCCCCCCCCCeEEEEEECCEEeeeEeccCCCCCCcccCcEEEEe
Confidence            4899999995      3678999999999999999999977 69999999766654

MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates

>PLN02964 phosphatidylserine decarboxylase

Probab=97.83  E-value=6.7e-05  Score=83.88  Aligned_cols=88  Identities=14%  Similarity=0.202  Sum_probs=68.5

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC-CcchHHH---HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccC
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG-NQVAANK---KEELFKAADKNGDGVVSVDELAALLALQQEKE  225 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-~~~~~ee---l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~  225 (547)
                      .+..+.+.++++|..+|.|++|.+    +..++..+| ...++++   ++++|+.+|.|++|.|+++||..+|..++...
T Consensus       137 f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~  212 (644)
T PLN02964        137 FVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLV  212 (644)
T ss_pred             ccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCC
Confidence            344455669999999999999997    777888888 4666666   89999999999999999999999999876533


Q ss_pred             cccccchhHHHHHhhhcccC
Q 008959          226 PLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       226 ~~~~~~~~~~~~l~~~D~~~  245 (547)
                      .+    ..+.++++..|.++
T Consensus       213 se----EEL~eaFk~fDkDg  228 (644)
T PLN02964        213 AA----NKKEELFKAADLNG  228 (644)
T ss_pred             CH----HHHHHHHHHhCCCC
Confidence            32    34666666556443

>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)

Probab=97.80  E-value=1.5e-05  Score=69.93  Aligned_cols=49  Identities=16%  Similarity=0.273  Sum_probs=42.2

Q ss_pred             EEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ||+|+|++|+      ..+..|||+.+.++++..||+++++++||+||+.+...+
T Consensus         1 ~~~V~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~kT~v~~~t~nP~Wne~f~f~~   55 (116)
T cd08376           1 VVTIVLVEGKNLPPMDDNGLSDPYVKFRLGNEKYKSKVCSKTLNPQWLEQFDLHL   55 (116)
T ss_pred             CEEEEEEEEECCCCCCCCCCCCcEEEEEECCEeEecccccCCCCCceeEEEEEEe
Confidence            6899999995      246789999999999999999999999999999655433

MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei

>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD)

Probab=97.78  E-value=2.3e-05  Score=73.16  Aligned_cols=37  Identities=24%  Similarity=0.487  Sum_probs=31.4

Q ss_pred             cCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHH
Q 008959           67 FKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        67 ~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +++||||.+.+++. ..||+++++++||+|||.+.+.+
T Consensus        56 g~sDPYv~V~l~~~~~~rT~v~~~~~nP~WnE~F~~~~   93 (158)
T cd04015          56 ITSDPYATVDLAGARVARTRVIENSENPVWNESFHIYC   93 (158)
T ss_pred             CCcCeEEEEEECCeEeeEEEEeCCCCCCccceEEEEEc
Confidence            34699999999974 57999999999999999777654

PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=97.75  E-value=7.1e-05  Score=63.14  Aligned_cols=61  Identities=21%  Similarity=0.317  Sum_probs=48.5

Q ss_pred             HHHHHHhhC-CCCCch-h----HHHHhhh-cCC---CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLD-PSSSNK-I----VGKISLS-CSV---EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D-~d~dG~-I----l~~ll~~-l~~---~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +.++|+.|| .|++|. |    +..++.. ++.   ..+++.+   ++.+|+.+|.|++|.|+++||..++..+
T Consensus        11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~---v~~i~~~~D~d~~G~I~f~eF~~l~~~~   81 (92)
T cd05025          11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADA---VDKIMKELDENGDGEVDFQEFVVLVAAL   81 (92)
T ss_pred             HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHH---HHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            899999997 999994 8    5566643 321   1345555   9999999999999999999999998764

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset

Probab=97.75  E-value=1.9e-05  Score=70.25  Aligned_cols=61  Identities=18%  Similarity=0.249  Sum_probs=46.2

Q ss_pred             EEEEEeecc-c-ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHHhcCCCcccceecc
Q 008959           56 ALLTLISAE-M-KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVF  116 (547)
Q Consensus        56 ~~i~~~~A~-~-~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~e~~~~~~~~isl~  116 (547)
                      |.|.|++|+ + ....||||++.++++..||+++++++||+|||.+.............+.++
T Consensus         2 L~V~Vi~a~~L~~~~~Dpyv~v~l~~~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~   64 (121)
T cd08378           2 LYVRVVKARGLPANSNDPVVEVKLGNYKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVW   64 (121)
T ss_pred             EEEEEEEecCCCcccCCCEEEEEECCccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEE
Confidence            789999996 2 118999999999999999999999999999996655543222333444433

MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate

>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins

Probab=97.73  E-value=2.4e-05  Score=69.14  Aligned_cols=51  Identities=25%  Similarity=0.443  Sum_probs=43.1

Q ss_pred             eeEEEEEEeecc-c------ccCCceEEEEEccc--ceEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE-M------KFKDKWLACVSLGE--QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~-~------~~~dd~~~~v~~g~--~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +|+|+|+|++|+ +      .+..|||+++.++.  +.+||++++++++|.||+.+...+
T Consensus         1 ~g~l~v~v~~a~~L~~~~~~~~~~dpyv~v~~~~~~~~~kT~~~~~~~~P~Wne~~~~~v   60 (124)
T cd04044           1 IGVLAVTIKSARGLKGSDIIGGTVDPYVTFSISNRRELARTKVKKDTSNPVWNETKYILV   60 (124)
T ss_pred             CeEEEEEEEcccCCCcccccCCCCCCeEEEEECCCCcceEeeeecCCCCCcceEEEEEEe
Confidence            599999999995 1      24579999999988  899999999999999999655443

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>smart00027 EH Eps15 homology domain

Probab=97.73  E-value=5.7e-05  Score=64.28  Aligned_cols=57  Identities=23%  Similarity=0.343  Sum_probs=48.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.++|..+|.|++|.|    +..++...   ..++.+   +..+|+.+|.+++|.|+++||..++..
T Consensus        12 l~~~F~~~D~d~~G~Is~~el~~~l~~~---~~~~~e---v~~i~~~~d~~~~g~I~~~eF~~~~~~   72 (96)
T smart00027       12 YEQIFRSLDKNQDGTVTGAQAKPILLKS---GLPQTL---LAKIWNLADIDNDGELDKDEFALAMHL   72 (96)
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHHc---CCCHHH---HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            8999999999999999    55555554   344555   889999999999999999999998865

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein

Probab=97.72  E-value=2.2e-05  Score=69.21  Aligned_cols=61  Identities=25%  Similarity=0.424  Sum_probs=46.3

Q ss_pred             EEEEEeecc-cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHHHhcCCCcccceecccC
Q 008959           56 ALLTLISAE-MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFED  118 (547)
Q Consensus        56 ~~i~~~~A~-~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll~e~~~~~~~~isl~e~  118 (547)
                      |.|+|.+|+ +.+..|||+++.+.     ...+||+++++++||+|||.+.+-++  ......+.+++.
T Consensus         1 L~V~V~~A~~L~~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~--~s~~L~~~v~d~   67 (118)
T cd08686           1 LNVIVHSAQGFKQSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELE--GSQTLRILCYEK   67 (118)
T ss_pred             CEEEEEeCCCCCCCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeC--CCCEEEEEEEEc
Confidence            578999995 67778999999774     24699999999999999997776653  233455555553

The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=97.71  E-value=5.5e-05  Score=64.11  Aligned_cols=61  Identities=20%  Similarity=0.315  Sum_probs=48.8

Q ss_pred             HHHHHHhhCC-CC-Cchh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC
Q 008959          122 DSEVFDLLDP-SS-SNKI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG  186 (547)
Q Consensus       122 l~~~F~~~D~-d~-dG~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg  186 (547)
                      +..+|..||. |+ +|.|    +..++..     ++. .+++.+   ++.+++.+|.+++|.|+++||..++..++
T Consensus        10 l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~-~~s~~e---i~~~~~~~D~~~dg~I~f~eF~~l~~~~~   81 (94)
T cd05031          10 LILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKN-QKDPMA---VDKIMKDLDQNRDGKVNFEEFVSLVAGLS   81 (94)
T ss_pred             HHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhc-cccHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            8899999997 97 6999    5555544     232 445555   89999999999999999999999987654

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset

Probab=97.70  E-value=3.2e-05  Score=69.13  Aligned_cols=48  Identities=15%  Similarity=0.227  Sum_probs=41.5

Q ss_pred             EEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|++|+      ..+.+||||++.++++..||+++++++||+|||.+...+
T Consensus         2 L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~rT~v~~~t~nP~Wne~f~f~~   55 (127)
T cd04022           2 LVVEVVDAQDLMPKDGQGSSSAYVELDFDGQKKRTRTKPKDLNPVWNEKLVFNV   55 (127)
T ss_pred             eEEEEEEeeCCCCCCCCCCcCcEEEEEECCEEecceeEcCCCCCccceEEEEEc
Confidence            789999994      356789999999999999999999999999999555433

MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates

>cd08677 C2A_Synaptotagmin-13 C2 domain

Probab=97.69  E-value=4.4e-05  Score=67.49  Aligned_cols=55  Identities=13%  Similarity=0.151  Sum_probs=45.1

Q ss_pred             cccccceeEEEEEEeecc---cccCCceEEEEEccc----ceEeeeecCCCCCCCchhhHHH
Q 008959           47 LNEEDFAGIALLTLISAE---MKFKDKWLACVSLGE----QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        47 ~~~~~~~gi~~i~~~~A~---~~~~dd~~~~v~~g~----~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ++=+...|-|.|+|++|+   +.+.+|||+.+.+..    ...+|++.++++||+|||.+..
T Consensus         7 L~Y~~~~~~L~V~vikA~~L~~~g~sDPYVKv~L~~~~k~~k~kT~v~rktlnPvfnE~f~F   68 (118)
T cd08677           7 LSYDKQKAELHVNILEAENISVDAGCECYISGCVSVSEGQKEAQTALKKLALHTQWEEELVF   68 (118)
T ss_pred             EEEcCcCCEEEEEEEEecCCCCCCCCCeEEEEEEcCCcCccEEEcceecCCCCCccccEEEE
Confidence            344677899999999995   455689999999864    5889999999999999995433

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain

>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4

Probab=97.68  E-value=3.6e-05  Score=68.30  Aligned_cols=48  Identities=19%  Similarity=0.158  Sum_probs=41.4

Q ss_pred             EEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|++|+      ..+..|||+.+.++++..+|+++++++||+||+.+...+
T Consensus         2 L~v~vi~a~~L~~~d~~~~~DPyv~v~~~~~~~kT~v~~~t~nP~Wne~f~f~~   55 (123)
T cd04025           2 LRCHVLEARDLAPKDRNGTSDPFVRVFYNGQTLETSVVKKSCYPRWNEVFEFEL   55 (123)
T ss_pred             EEEEEEEeeCCCCCCCCCCcCceEEEEECCEEEeceeecCCCCCccCcEEEEEc
Confidence            789999995      245679999999999999999999999999999666554

RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=97.68  E-value=0.00018  Score=75.07  Aligned_cols=66  Identities=24%  Similarity=0.422  Sum_probs=57.5

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcC----CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFG----NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg----~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .-++.+|..+|.|++|.|+.+||.+++.-++    ..++.+++-++=+.+|.|+||.|++.||.+.++-.
T Consensus       547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv  616 (631)
T KOG0377|consen  547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV  616 (631)
T ss_pred             hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence            3466899999999999999999999987654    45788899999999999999999999999988653

>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins

Probab=97.67  E-value=4.5e-05  Score=67.81  Aligned_cols=48  Identities=19%  Similarity=0.260  Sum_probs=39.3

Q ss_pred             EEEEEeecc-c----ccCCceEEEEEc-c------cceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE-M----KFKDKWLACVSL-G------EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~-~----~~~dd~~~~v~~-g------~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|.|++|+ +    .+.+|||+++.+ |      .+.+||+++++++||+|||.+...+
T Consensus         2 L~V~Vi~A~~L~~~d~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v   61 (120)
T cd08395           2 VTVKVVAANDLKWQTTGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFIL   61 (120)
T ss_pred             EEEEEEECcCCCcccCCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEe
Confidence            789999995 1    367899999996 4      2478999999999999999666554

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi

>PF14658 EF-hand_9: EF-hand domain

Probab=97.65  E-value=0.00011  Score=57.70  Aligned_cols=58  Identities=17%  Similarity=0.372  Sum_probs=51.8

Q ss_pred             HHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCC-CcccHHHHHHHHHh
Q 008959          124 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQD-GQLSFKEFSDLISA  184 (547)
Q Consensus       124 ~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~d-G~Is~~Ef~~~l~~  184 (547)
                      .+|++||+++.|.+    +..++++++...|++.+   ++.+.+.+|+++. |.|+++.|..+|+.
T Consensus         2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~---Lq~l~~elDP~g~~~~v~~d~F~~iM~~   64 (66)
T PF14658_consen    2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESE---LQDLINELDPEGRDGSVNFDTFLAIMRD   64 (66)
T ss_pred             cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHH---HHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence            36899999999999    77788999887788887   9999999999988 99999999999864

>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)

Probab=97.64  E-value=2.9e-05  Score=68.56  Aligned_cols=49  Identities=16%  Similarity=0.285  Sum_probs=40.5

Q ss_pred             EEEEEEeecc------cccCCceEEEEEcc---cceEeeeecCCCCCCCchhhHHHHH
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      .|.|+|++|+      ..++.|||+++.++   .+..||+++++++||+||+.+...+
T Consensus         1 ~L~V~vi~a~~L~~~~~~~~~Dpyv~v~~~~~~~~~~kT~vv~~t~nP~Wne~f~f~i   58 (119)
T cd04036           1 LLTVRVLRATNITKGDLLSTPDCYVELWLPTASDEKKRTKTIKNSINPVWNETFEFRI   58 (119)
T ss_pred             CeEEEEEEeeCCCccCCCCCCCcEEEEEEcCCCCccCccceecCCCCCccceEEEEEe
Confidence            3789999995      24578999999986   4789999999999999999666544

A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=97.63  E-value=0.00022  Score=63.73  Aligned_cols=94  Identities=13%  Similarity=0.157  Sum_probs=75.4

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCC--CCCCcCHHHHHHHHHhhhccCcccc
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKN--GDGVVSVDELAALLALQQEKEPLMN  229 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d--~dG~Is~~Ef~~~l~~l~~~~~~~~  229 (547)
                      .+....++++|..||..+||+|+....-+.|+.+|.+.+++++.+....++.+  +-..|+|++|.-++..+........
T Consensus         7 ~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t   86 (152)
T KOG0030|consen    7 PDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGT   86 (152)
T ss_pred             cchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCc
Confidence            33445599999999999999999999999999999999999999999999888  4568999999999988876543321


Q ss_pred             cchhHHHHHhhhcccCc
Q 008959          230 CCPVCGETLEVADMVNT  246 (547)
Q Consensus       230 ~~~~~~~~l~~~D~~~~  246 (547)
                      . ..+-+-|+..|..+.
T Consensus        87 ~-edfvegLrvFDkeg~  102 (152)
T KOG0030|consen   87 Y-EDFVEGLRVFDKEGN  102 (152)
T ss_pred             H-HHHHHHHHhhcccCC
Confidence            1 345555666665443

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=97.60  E-value=0.00015  Score=60.86  Aligned_cols=60  Identities=15%  Similarity=0.340  Sum_probs=48.9

Q ss_pred             HHHHHHhhCC-CC-Cchh----HHHHhhh---cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDP-SS-SNKI----VGKISLS---CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~-d~-dG~I----l~~ll~~---l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|..||. |+ +|.|    +..++..   ++ ..+++++   +.++++.+|.|++|.|+++||..++..+
T Consensus        12 ~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg-~k~t~~e---v~~m~~~~D~d~dG~Idf~EFv~lm~~l   80 (88)
T cd05029          12 LVAIFHKYSGREGDKNTLSKKELKELIQKELTIG-SKLQDAE---IAKLMEDLDRNKDQEVNFQEYVTFLGAL   80 (88)
T ss_pred             HHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcC-CCCCHHH---HHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            7889999998 77 7888    6666642   34 3566766   8999999999999999999999988754

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=97.60  E-value=7.1e-05  Score=67.09  Aligned_cols=97  Identities=27%  Similarity=0.377  Sum_probs=75.0

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchH-HHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhcc-Ccccc
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAA-NKKEELFKAADKNGDGVVSVDELAALLALQQEK-EPLMN  229 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~-eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~-~~~~~  229 (547)
                      -.+.++-+++-+.|..||.|.+++++|.+++.-+.+.-+. -++.-+|+.+|-|+|++|..+++...++.+... ....+
T Consensus        67 Lkenpfk~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eE  146 (189)
T KOG0038|consen   67 LKENPFKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEE  146 (189)
T ss_pred             hhcChHHHHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHH
Confidence            3344566788889999999999999999999876554333 356678999999999999999999999988543 22223


Q ss_pred             cchhHHHHHhhhcccCccc
Q 008959          230 CCPVCGETLEVADMVNTMI  248 (547)
Q Consensus       230 ~~~~~~~~l~~~D~~~~l~  248 (547)
                      ...+|.++|++.|.+++..
T Consensus       147 v~~i~ekvieEAD~DgDgk  165 (189)
T KOG0038|consen  147 VELICEKVIEEADLDGDGK  165 (189)
T ss_pred             HHHHHHHHHHHhcCCCCCc
Confidence            3357999999999877653

>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks)

Probab=97.59  E-value=5.9e-05  Score=67.14  Aligned_cols=49  Identities=14%  Similarity=0.149  Sum_probs=41.9

Q ss_pred             eeEEEEEEeecc-c----ccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHH
Q 008959           53 AGIALLTLISAE-M----KFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        53 ~gi~~i~~~~A~-~----~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .|.|.|+|++|+ +    ++..||||.+.++     .+..||+++++++||+|||.+..
T Consensus        12 ~~~L~V~Vi~A~~L~~~~~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f   70 (122)
T cd08381          12 NGTLFVMVMHAKNLPLLDGSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVY   70 (122)
T ss_pred             CCEEEEEEEEeeCCCCCCCCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEE
Confidence            689999999994 2    6678999999997     45789999999999999995543

There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut

>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin

Probab=97.59  E-value=6.5e-05  Score=65.47  Aligned_cols=47  Identities=19%  Similarity=0.164  Sum_probs=41.8

Q ss_pred             EEEEEEeecc-c-ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHH
Q 008959           55 IALLTLISAE-M-KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        55 i~~i~~~~A~-~-~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -|+|+|++|+ + ++..||||.+.++++..||++++++++|+|||.+..
T Consensus         5 ~l~V~v~~a~~L~~~~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f   53 (111)
T cd04011           5 QVRVRVIEARQLVGGNIDPVVKVEVGGQKKYTSVKKGTNCPFYNEYFFF   53 (111)
T ss_pred             EEEEEEEEcccCCCCCCCCEEEEEECCEeeeeeEEeccCCCccccEEEE
Confidence            4799999996 3 788999999999999999999999999999995443

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme

>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)

Probab=97.58  E-value=7.1e-05  Score=65.79  Aligned_cols=49  Identities=20%  Similarity=0.202  Sum_probs=42.8

Q ss_pred             eEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHH
Q 008959           54 GIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        54 gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      |-|+|+|++|+      .....|||+.+.++.+..||+++++++||.||+.+.+-
T Consensus         1 g~l~v~v~~a~~L~~~~~~~~~dPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~~~   55 (119)
T cd08377           1 GFLQVKVIRASGLAAADIGGKSDPFCVLELVNARLQTHTIYKTLNPEWNKIFTFP   55 (119)
T ss_pred             CEEEEEEEeeeCCCCCCCCCCCCcEEEEEECCEeeecceecCCcCCccCcEEEEE
Confidence            78999999995      45678999999999999999999999999999955443

MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran

>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins

Probab=97.58  E-value=5.2e-05  Score=67.49  Aligned_cols=48  Identities=25%  Similarity=0.345  Sum_probs=41.1

Q ss_pred             EEEEEeecc------cccCCceEEEEEcc-cceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLG-EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g-~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|++|+      ..+..|||+++.++ .+.+||+++++++||+|||.+.+.+
T Consensus         2 l~v~v~~A~~L~~~~~~~~~dpyv~v~~~~~~~~kT~v~~~t~nP~Wne~f~~~~   56 (123)
T cd08382           2 VRLTVLCADGLAKRDLFRLPDPFAVITVDGGQTHSTDVAKKTLDPKWNEHFDLTV   56 (123)
T ss_pred             eEEEEEEecCCCccCCCCCCCcEEEEEECCccceEccEEcCCCCCcccceEEEEe
Confidence            789999995      24578999999995 8899999999999999999666655

A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are

>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)

Probab=97.57  E-value=6.3e-05  Score=66.57  Aligned_cols=48  Identities=10%  Similarity=0.125  Sum_probs=40.5

Q ss_pred             EEEEEeecc------cccCCceEEEEEccc-ceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGE-QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~-~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|++|+      ..++.|||+.+.++. +.+||+++++++||+|||.+...+
T Consensus         2 L~v~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~f~v   56 (121)
T cd04042           2 LDIHLKEGRNLAARDRGGTSDPYVKFKYGGKTVYKSKTIYKNLNPVWDEKFTLPI   56 (121)
T ss_pred             eEEEEEEeeCCCCcCCCCCCCCeEEEEECCEEEEEeeeccCCCCCccceeEEEEe
Confidence            789999994      356889999999987 789999999999999999665543

MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein

>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin

Probab=97.57  E-value=5.3e-05  Score=67.61  Aligned_cols=48  Identities=19%  Similarity=0.183  Sum_probs=40.6

Q ss_pred             EEEEEEeecc------cccCCceEEEEEcccce--EeeeecCCCCCCCchhhHHHH
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLGEQT--CRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g~~~--frT~vi~~tLnP~Wne~~kll  102 (547)
                      +|||.|++|+      ..++.|||+.+..|.+.  .||+++++++||+|||.+.+.
T Consensus         1 ~lrV~Vi~a~~L~~~d~~g~~DPYv~v~~~~~~~~~kT~~v~~t~nP~Wne~f~f~   56 (124)
T cd04037           1 LVRVYVVRARNLQPKDPNGKSDPYLKIKLGKKKINDRDNYIPNTLNPVFGKMFELE   56 (124)
T ss_pred             CEEEEEEECcCCCCCCCCCCCCcEEEEEECCeeccceeeEEECCCCCccceEEEEE
Confidence            5899999995      35789999999999986  578889999999999965553

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=97.57  E-value=0.00017  Score=56.36  Aligned_cols=56  Identities=21%  Similarity=0.326  Sum_probs=45.5

Q ss_pred             HHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          123 SEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       123 ~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +++|..+|.|++|.|    +..++..++   .+.++   ++.+|+.+|.+++|.|+++||..++..
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g---~~~~~---~~~i~~~~d~~~~g~i~~~ef~~~~~~   61 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSG---LPRSV---LAQIWDLADTDKDGKLDKEEFAIAMHL   61 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcC---CCHHH---HHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            578999999999999    555555543   24444   899999999999999999999998864

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=97.51  E-value=0.00069  Score=56.88  Aligned_cols=65  Identities=18%  Similarity=0.215  Sum_probs=53.9

Q ss_pred             HHHHHHHhhcCCCCCcccHHHHHHHHHh-c----CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          157 FARRILSIVDYNQDGQLSFKEFSDLISA-F----GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       157 ~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-l----g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      .+...|..+- .+.++++..||..++.. +    .....++.++++++..|.|+||.|+|.||..++..+.
T Consensus         9 ~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~   78 (91)
T cd05024           9 KMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL   78 (91)
T ss_pred             HHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            4677888887 34579999999999965 4    3445677899999999999999999999999997753

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins

Probab=97.50  E-value=8.8e-05  Score=65.77  Aligned_cols=53  Identities=19%  Similarity=0.143  Sum_probs=44.6

Q ss_pred             cccceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHH
Q 008959           49 EEDFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        49 ~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -+...|.|.|+|++|+      ..+..|||+.+.++.     +..||++++++++|+||+.+..
T Consensus        11 ~~~~~~~L~V~vi~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f   74 (125)
T cd04031          11 YDKVTSQLIVTVLQARDLPPRDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEY   74 (125)
T ss_pred             EeCCCCEEEEEEEEecCCCCcCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEE
Confidence            3667789999999995      356789999999864     7889999999999999996544

RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as

>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins

Probab=97.50  E-value=0.00012  Score=64.96  Aligned_cols=48  Identities=23%  Similarity=0.189  Sum_probs=41.5

Q ss_pred             eEEEEEEeecc------cccCCceEEEEEccc-ceEeeeecCCCCCCCchhhHHH
Q 008959           54 GIALLTLISAE------MKFKDKWLACVSLGE-QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        54 gi~~i~~~~A~------~~~~dd~~~~v~~g~-~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      |+|+|+|++|+      ..++.|||+++.+++ +..+|++.+++++|+||+.+..
T Consensus         1 g~L~V~Vi~a~~L~~~d~~g~~DPYv~v~~~~~~~~kT~~~~~t~~P~Wne~f~~   55 (120)
T cd04045           1 GVLRLHIRKANDLKNLEGVGKIDPYVRVLVNGIVKGRTVTISNTLNPVWDEVLYV   55 (120)
T ss_pred             CeEEEEEEeeECCCCccCCCCcCCEEEEEECCEEeeceeEECCCcCCccCceEEE
Confidence            89999999994      467899999999976 5799999999999999995433

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=97.49  E-value=0.00019  Score=76.14  Aligned_cols=52  Identities=29%  Similarity=0.462  Sum_probs=46.9

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ..++.+|+.+|.|+||.|+.+||..             ++.+|+.+|.|+||.|+++||.+.+..
T Consensus       334 ~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~  385 (391)
T PRK12309        334 HAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGA  385 (391)
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            3489999999999999999999942             578999999999999999999998865

>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8

Probab=97.49  E-value=0.00011  Score=65.28  Aligned_cols=55  Identities=22%  Similarity=0.169  Sum_probs=45.2

Q ss_pred             cccccceeEEEEEEeecc------cccCCceEEEEEcc---cceEeeeecCCCCCCCchhhHHH
Q 008959           47 LNEEDFAGIALLTLISAE------MKFKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        47 ~~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-+.-.|.|+|+|++|+      ..+..|||+.+.++   .+.+||++++++++|+|||.+..
T Consensus         9 l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~~P~wne~f~f   72 (124)
T cd08387           9 LEYDKDMGILNVKLIQARNLQPRDFSGTADPYCKVRLLPDRSNTKQSKIHKKTLNPEFDESFVF   72 (124)
T ss_pred             EEECCCCCEEEEEEEEeeCCCCCCCCCCCCCeEEEEEecCCCCcEeCceEcCCCCCCcccEEEE
Confidence            444666899999999994      46678999999973   56899999999999999995444

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv

>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon

Probab=97.49  E-value=0.00014  Score=65.46  Aligned_cols=52  Identities=17%  Similarity=0.319  Sum_probs=43.5

Q ss_pred             ceeEEEEEEeecc-c---c------------cCCceEEEEEcccce-EeeeecCCCCCCCchhhHHHHH
Q 008959           52 FAGIALLTLISAE-M---K------------FKDKWLACVSLGEQT-CRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        52 ~~gi~~i~~~~A~-~---~------------~~dd~~~~v~~g~~~-frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.|+|+|+|++|+ +   .            +..||||.+.++++. .||++.+++++|.|||.+...+
T Consensus         2 ~~g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~~~~~kT~~~~~t~~P~Wne~f~~~v   70 (132)
T cd04014           2 FTGTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDDTHIGKTSTKPKTNSPVWNEEFTTEV   70 (132)
T ss_pred             cceEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECCEEEeEEeEcCCCCCCCcceeEEEEc
Confidence            4699999999994 1   1            468999999999865 6999999999999999776655

A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that

>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins

Probab=97.47  E-value=0.00012  Score=68.00  Aligned_cols=54  Identities=17%  Similarity=0.166  Sum_probs=44.6

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEccc-----------------------------ceEeeeecCCCCCCC
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGE-----------------------------QTCRTAISDNTDKPI   94 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----------------------------~~frT~vi~~tLnP~   94 (547)
                      ..-.++|+|+|++|+      ..+.+||||.+.++.                             +..||++++++++|+
T Consensus        24 ~~~~~~L~V~vi~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~  103 (153)
T cd08676          24 EPPIFVLKVTVIEAKGLLAKDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQTLNPV  103 (153)
T ss_pred             CCCeEEEEEEEEeccCCcccCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCCCCCc
Confidence            455899999999995      357899999998863                             358999999999999


Q ss_pred             chhhHHHHH
Q 008959           95 WNSEKKLLL  103 (547)
Q Consensus        95 Wne~~kll~  103 (547)
                      ||+.+.+.+
T Consensus       104 WnE~F~f~v  112 (153)
T cd08676         104 WNETFRFEV  112 (153)
T ss_pred             cccEEEEEe
Confidence            999666554

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy

>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins

Probab=97.46  E-value=0.00011  Score=65.70  Aligned_cols=50  Identities=10%  Similarity=0.123  Sum_probs=40.9

Q ss_pred             eeEEEEEEeecc-c--ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE-M--KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~-~--~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ||-|.|.|++|+ +  ...-+|||++.+|++..+|++.+.+ ||.|||.+..-.
T Consensus         1 m~~L~V~Vv~Ar~L~~~~~~dPYV~Ik~g~~k~kT~v~~~~-nP~WnE~F~F~~   53 (127)
T cd08394           1 MSLLCVLVKKAKLDGAPDKFNTYVTLKVQNVKSTTIAVRGS-QPCWEQDFMFEI   53 (127)
T ss_pred             CceEEEEEEEeeCCCCCCCCCCeEEEEECCEEeEeeECCCC-CCceeeEEEEEE
Confidence            688999999996 2  2233899999999999999999885 999999554444

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi

>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11

Probab=97.45  E-value=0.00012  Score=65.80  Aligned_cols=52  Identities=13%  Similarity=0.169  Sum_probs=42.5

Q ss_pred             ccceeEEEEEEeecc------c-ccCCceEEEEEcc---cceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------M-KFKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~-~~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.+.|.|+|++|+      . ++..||||.+.++   .+..||+++++++||+|||.+..
T Consensus        12 ~~~~~~L~V~Vi~a~~L~~~~~~~~~~DpyV~v~l~~~~~~~~kT~v~~~t~nP~wnE~F~f   73 (128)
T cd08388          12 NSEKKALLVNIIECRDLPAMDEQSGTSDPYVKLQLLPEKEHKVKTRVLRKTRNPVYDETFTF   73 (128)
T ss_pred             ECCCCEEEEEEEEeECCCCCCCCCCCcCCEEEEEEeCCcCceeeccEEcCCCCCceeeEEEE
Confidence            334578999999995      1 3678999999875   56889999999999999996654

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence

>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain

Probab=97.43  E-value=5.8e-05  Score=67.90  Aligned_cols=54  Identities=13%  Similarity=0.051  Sum_probs=43.9

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +...|.|.|+|++|+      ..+..|||+.+.++     .+..||++++++++|+||+.+..-+
T Consensus         9 ~~~~~~L~V~Vi~a~~L~~~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~   73 (133)
T cd08384           9 NTQRRGLIVGIIRCVNLAAMDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDI   73 (133)
T ss_pred             cCCCCEEEEEEEEEcCCCCcCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEEC
Confidence            566899999999995      35578999999885     3578999999999999999555433

Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai

>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7

Probab=97.43  E-value=5.7e-05  Score=68.36  Aligned_cols=54  Identities=19%  Similarity=0.111  Sum_probs=43.2

Q ss_pred             ccccceeEEEEEEeecc------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHH
Q 008959           48 NEEDFAGIALLTLISAE------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        48 ~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +-+...|.|.|+|++|+      ..++.|||+.+.+.     ....||++++++++|+||+.+..
T Consensus         9 ~y~~~~~~L~v~vi~a~~L~~~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f   73 (136)
T cd08405           9 CYNPTANRITVNIIKARNLKAMDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIF   73 (136)
T ss_pred             EEcCCCCeEEEEEEEeeCCCccccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEE
Confidence            33566789999999995      46678999998872     24679999999999999995543

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves

>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone

Probab=97.43  E-value=0.00012  Score=63.71  Aligned_cols=48  Identities=17%  Similarity=0.306  Sum_probs=40.2

Q ss_pred             EEEEEeecc----c---ccCCceEEEEEcccceEeeeecCCCCCCCc-hhhHHHHH
Q 008959           56 ALLTLISAE----M---KFKDKWLACVSLGEQTCRTAISDNTDKPIW-NSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~----~---~~~dd~~~~v~~g~~~frT~vi~~tLnP~W-ne~~kll~  103 (547)
                      |.|+|++|+    +   .+..|||+++.+|.+..||++++++++|+| ||.+...+
T Consensus         1 l~V~v~~a~~L~~~d~~~~~~Dpyv~v~~~~~~~kT~v~~~~~nP~W~ne~f~f~i   56 (110)
T cd08688           1 LKVRVVAARDLPVMDRSSDLTDAFVEVKFGSTTYKTDVVKKSLNPVWNSEWFRFEV   56 (110)
T ss_pred             CEEEEEEEECCCccccCCCCCCceEEEEECCeeEecceecCCCCCcccCcEEEEEc
Confidence            578999995    2   356799999999999999999999999999 88554444

The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a

>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene

Probab=97.41  E-value=0.00018  Score=63.95  Aligned_cols=50  Identities=22%  Similarity=0.272  Sum_probs=43.0

Q ss_pred             eEEEEEEeecc------cccCCceEEEEEcccceEeeeecCC-CCCCCchhhHHHHH
Q 008959           54 GIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDN-TDKPIWNSEKKLLL  103 (547)
Q Consensus        54 gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~-tLnP~Wne~~kll~  103 (547)
                      |.|.|+|++|+      ...+.|||++++++++..+|++.++ +++|.||+.+...+
T Consensus         1 g~L~V~V~~A~~L~~~~~~~~~dpyv~v~~~~~~~~T~~~~~~t~nP~Wne~f~f~v   57 (124)
T cd04049           1 GTLEVLLISAKGLQDTDFLGKIDPYVIIQCRTQERKSKVAKGDGRNPEWNEKFKFTV   57 (124)
T ss_pred             CeEEEEEEecCCCCCCCCCCCcCceEEEEECCEeeeeeEcCCCCCCCcccceEEEEe
Confidence            78999999995      3568999999999999999999985 99999999555444

In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=97.40  E-value=0.00017  Score=48.03  Aligned_cols=26  Identities=23%  Similarity=0.543  Sum_probs=14.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      ++.+|+.+|.|++|+|+.+||..++.
T Consensus         2 l~~~F~~~D~d~dG~I~~~el~~~l~   27 (31)
T PF13405_consen    2 LREAFKMFDKDGDGFIDFEELRAILR   27 (31)
T ss_dssp             HHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            45555555555555555555555555

...

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=97.40  E-value=0.0002  Score=47.65  Aligned_cols=30  Identities=40%  Similarity=0.623  Sum_probs=26.0

Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHH-hhh
Q 008959          193 KKEELFKAADKNGDGVVSVDELAALLA-LQQ  222 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~l~-~l~  222 (547)
                      +++++|+.+|.|+||+|+.+||.++++ .+|
T Consensus         1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG   31 (31)
T PF13405_consen    1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG   31 (31)
T ss_dssp             HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence            478999999999999999999999998 454

...

>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin

Probab=97.39  E-value=0.00014  Score=67.24  Aligned_cols=48  Identities=23%  Similarity=0.273  Sum_probs=39.9

Q ss_pred             EEEEEEeecc----c--c--------------cCCceEEEEEcccceEeeeecCCCCCCCchhhHHHH
Q 008959           55 IALLTLISAE----M--K--------------FKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        55 i~~i~~~~A~----~--~--------------~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +|.|+|++|+    |  .              ...|||+++.++++..||+++++++||+|||.+.+-
T Consensus         1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g~~~kT~v~~~t~nPvWNE~f~f~   68 (151)
T cd04018           1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAGQKVKTSVKKNSYNPEWNEQIVFP   68 (151)
T ss_pred             CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECCEeeecceEcCCCCCCcceEEEEE
Confidence            3678889995    1  1              357999999999999999999999999999965543

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4

Probab=97.39  E-value=0.00015  Score=67.87  Aligned_cols=50  Identities=14%  Similarity=0.141  Sum_probs=42.0

Q ss_pred             cceeEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHH
Q 008959           51 DFAGIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        51 ~~~gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~k  100 (547)
                      ...|.|.|+|++|+      ..+..||||.+.+     +.+..||+++++++||+||+.+.
T Consensus        24 ~~~g~L~V~Vi~A~nL~~~d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~   84 (162)
T cd04020          24 PSTGELHVWVKEAKNLPALKSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFV   84 (162)
T ss_pred             CCCceEEEEEEeeeCCCCCCCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEE
Confidence            35799999999995      2467799999887     56789999999999999999544

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin

>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5

Probab=97.39  E-value=0.00015  Score=64.80  Aligned_cols=57  Identities=18%  Similarity=0.151  Sum_probs=45.0

Q ss_pred             cccccceeEEEEEEeecc-------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHHH
Q 008959           47 LNEEDFAGIALLTLISAE-------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        47 ~~~~~~~gi~~i~~~~A~-------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.-+...|.|.|+|++|+       ..+..|||+.+.+.     ....||++.++++||+|||.+..-+
T Consensus         8 l~y~~~~~~L~V~Vi~a~~L~~~~~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i   76 (125)
T cd04029           8 LSYDYKTQSLNVHVKECRNLAYGDEAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSI   76 (125)
T ss_pred             EEEECCCCeEEEEEEEecCCCccCCCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEEC
Confidence            344667899999999995       14679999998885     3467999999999999999654433

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=97.38  E-value=0.00031  Score=58.58  Aligned_cols=61  Identities=20%  Similarity=0.335  Sum_probs=47.6

Q ss_pred             HHHHHHhhCC--CCCchh----HHHHhhh-cCC---CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDP--SSSNKI----VGKISLS-CSV---EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~--d~dG~I----l~~ll~~-l~~---~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++++|..||.  |++|.|    +..++.. ++.   ..++..+   +..++..+|.+++|.|+++||..++..+
T Consensus        10 l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~e---i~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213          10 IIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEA---VDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHH---HHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            8889999999  899999    5555543 221   1123444   8999999999999999999999998754

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins

Probab=97.38  E-value=0.00016  Score=64.70  Aligned_cols=47  Identities=19%  Similarity=0.287  Sum_probs=40.8

Q ss_pred             EEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHH
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -|+|+|++|+      ..++.|||+++.++.+..||++++++++|.||+.+..
T Consensus         2 ~L~V~vi~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~v~~t~~P~Wne~f~f   54 (127)
T cd04027           2 KISITVVCAQGLIAKDKTGTSDPYVTVQVGKTKKRTKTIPQNLNPVWNEKFHF   54 (127)
T ss_pred             eEEEEEEECcCCcCCCCCCCcCcEEEEEECCEeeecceecCCCCCccceEEEE
Confidence            4789999995      3457799999999999999999999999999996654

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev

>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12

Probab=97.37  E-value=6.8e-05  Score=68.15  Aligned_cols=52  Identities=19%  Similarity=0.219  Sum_probs=41.4

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc---ccc--eEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL---GEQ--TCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~---g~~--~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +...+.|.|+|++|+      ..+.+|||+.+.+   +.+  ..||++.++++||+|||.+..
T Consensus        11 ~~~~~~L~V~Vi~A~nL~~~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F   73 (136)
T cd08406          11 LPTAERLTVVVVKARNLVWDNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIF   73 (136)
T ss_pred             cCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEE
Confidence            455678999999995      3567899999988   333  668999999999999995443

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=97.37  E-value=0.0006  Score=51.17  Aligned_cols=57  Identities=28%  Similarity=0.415  Sum_probs=45.4

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      +..+|..+|.+++|.+    +..++..++. ..+...   +..+|+.+|.+++|.|+++||..++
T Consensus         2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~-~~~~~~---~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKDGDGTISADELKAALKSLGE-GLSEEE---IDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            4578999999999998    5555555543 444555   8889999999999999999998765

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=97.36  E-value=0.00058  Score=59.07  Aligned_cols=67  Identities=24%  Similarity=0.363  Sum_probs=57.3

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +++|......+|+..|. ++|.|+-++...++...+  ++.+.+.+++...|.|+||+++++||.-+|+-
T Consensus         5 s~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L   71 (104)
T PF12763_consen    5 SPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAMHL   71 (104)
T ss_dssp             SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence            45556668899999885 689999999999998766  88899999999999999999999999988854

...

>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4

Probab=97.35  E-value=0.00021  Score=63.31  Aligned_cols=47  Identities=17%  Similarity=0.259  Sum_probs=39.2

Q ss_pred             EEEEEeecc------cccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll  102 (547)
                      |.|.|++|+      ..++.|||+++.++++ .+||+++++++||+||+.+..-
T Consensus         2 l~v~vi~a~~L~~~d~~g~~DPYv~v~~~~~~~~kT~v~~~t~nP~Wne~f~~~   55 (121)
T cd04054           2 LYIRIVEGKNLPAKDITGSSDPYCIVKVDNEVIIRTATVWKTLNPFWGEEYTVH   55 (121)
T ss_pred             EEEEEEEeeCCcCCCCCCCCCceEEEEECCEeeeeeeeEcCCCCCcccceEEEe
Confidence            678999995      3568899999999776 5799999999999999965543

Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.

>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin

Probab=97.35  E-value=0.00026  Score=64.04  Aligned_cols=45  Identities=20%  Similarity=0.132  Sum_probs=40.2

Q ss_pred             EEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~k  100 (547)
                      |+|+|++|+      ..+..|||+.+.++.+..||+++++++||+||+.+.
T Consensus         3 l~v~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~Wne~~~   53 (135)
T cd04017           3 LRAYIYQARDLLAADKSGLSDPFARVSFLNQSQETEVIKETLSPTWDQTLI   53 (135)
T ss_pred             EEEEEEEeecCcCCCCCCCCCCEEEEEECCeeeEeeeEcCCCCCccCcEEE
Confidence            789999995      366889999999999999999999999999999543

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme

>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3)

Probab=97.34  E-value=0.00014  Score=67.17  Aligned_cols=48  Identities=19%  Similarity=0.136  Sum_probs=40.5

Q ss_pred             EEEEEeecc----cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE----MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~----~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |.|+|++|+    ..+..||||.+.++.     +..||+++++++||+|||.+..-+
T Consensus         2 L~V~Vi~ArnL~~~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v   58 (148)
T cd04010           2 LSVRVIECSDLALKNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDV   58 (148)
T ss_pred             EEEEEEeCcCCCCCCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEE
Confidence            789999995    246789999999987     789999999999999999655443

RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain

>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3

Probab=97.34  E-value=0.00021  Score=63.49  Aligned_cols=48  Identities=13%  Similarity=0.153  Sum_probs=39.2

Q ss_pred             EEEEEeecc----c---ccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE----M---KFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~----~---~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|.|++|+    +   .+..||||.+.++.+ .+||+++++++||+|||.+..-+
T Consensus         2 l~v~v~~a~~L~~~~~~~g~sDpYv~v~l~~~~~~kT~v~~kt~~P~WnE~F~f~v   57 (121)
T cd08401           2 LKIKIGEAKNLPPRSGPNKMRDCYCTVNLDQEEVFRTKTVEKSLCPFFGEDFYFEI   57 (121)
T ss_pred             eEEEEEEccCCCCCCCCCCCcCcEEEEEECCccEEEeeEEECCCCCccCCeEEEEc
Confidence            678899994    1   246799999999876 79999999999999999665544

RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p

>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1)

Probab=97.33  E-value=0.00026  Score=63.31  Aligned_cols=47  Identities=23%  Similarity=0.400  Sum_probs=37.9

Q ss_pred             eEEEEEEeecc---cccCCceEEEEEccc-ceEeeeecCCCCCCCchhhHHH
Q 008959           54 GIALLTLISAE---MKFKDKWLACVSLGE-QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        54 gi~~i~~~~A~---~~~~dd~~~~v~~g~-~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ..|+|+|++|+   .....||||.+.+++ +..||++ ++++||+|||.+..
T Consensus         4 ~~L~V~Vi~A~~L~~~~~~DPYv~v~l~~~~~~kT~v-~~~~nP~WnE~f~f   54 (126)
T cd08400           4 RSLQLNVLEAHKLPVKHVPHPYCVISLNEVKVARTKV-REGPNPVWSEEFVF   54 (126)
T ss_pred             eEEEEEEEEeeCCCCCCCCCeeEEEEECCEeEEEeec-CCCCCCccCCEEEE
Confidence            46999999995   244679999999987 4589997 56899999995544

RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=97.31  E-value=0.00064  Score=50.45  Aligned_cols=50  Identities=22%  Similarity=0.403  Sum_probs=41.7

Q ss_pred             cccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          172 QLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       172 ~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +++++|...+|+.+...++++-+..+|+..|++++|.+..+||..+++.+
T Consensus         1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L   50 (51)
T PF14788_consen    1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL   50 (51)
T ss_dssp             EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999999999988764

...

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=97.30  E-value=0.00023  Score=45.06  Aligned_cols=23  Identities=35%  Similarity=0.707  Sum_probs=13.0

Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHH
Q 008959          195 EELFKAADKNGDGVVSVDELAAL  217 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~  217 (547)
                      +++|+.+|.|+||.||.+||.++
T Consensus         2 ~~~F~~~D~d~DG~is~~E~~~~   24 (25)
T PF13202_consen    2 KDAFQQFDTDGDGKISFEEFQRL   24 (25)
T ss_dssp             HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred             HHHHHHHcCCCCCcCCHHHHHHH
Confidence            44555555555555555555553

...

>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10

Probab=97.28  E-value=0.00027  Score=62.74  Aligned_cols=54  Identities=17%  Similarity=0.121  Sum_probs=43.6

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcc---cceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.-.|.|.|+|++|+      ..+..|||+.+.+.   .+.+||+++++++||+|||.+...+
T Consensus        12 ~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~i   74 (124)
T cd08385          12 DFQSNQLTVGIIQAADLPAMDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLNPVFNETFTFKV   74 (124)
T ss_pred             eCCCCEEEEEEEEeeCCCCccCCCCCCCEEEEEEEcCCCCceecccCcCCCCCceeeeEEEeC
Confidence            455688999999995      35678999998874   4689999999999999999555443

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=97.25  E-value=0.00056  Score=57.48  Aligned_cols=61  Identities=23%  Similarity=0.302  Sum_probs=44.9

Q ss_pred             HHHHHHh-hCCCCCc-hh----HHHHhhhcC----CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDL-LDPSSSN-KI----VGKISLSCS----VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~-~D~d~dG-~I----l~~ll~~l~----~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|.. +|.|++| .|    +..++....    .....+.+   +..+++.+|.|+||.|+++||..++..+
T Consensus        11 l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~---~~~ll~~~D~d~DG~I~f~EF~~l~~~l   81 (89)
T cd05023          11 LIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGV---LDRMMKKLDLNSDGQLDFQEFLNLIGGL   81 (89)
T ss_pred             HHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHH---HHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            7889998 7788986 77    444444321    11222344   8999999999999999999999988764

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins

Probab=97.24  E-value=0.00028  Score=62.73  Aligned_cols=54  Identities=7%  Similarity=0.055  Sum_probs=44.6

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.-.|.|.|+|++|+      .....|||+.+.+.     ...+||+++++++||+|||.+...+
T Consensus        12 ~~~~~~L~V~vi~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i   76 (127)
T cd04030          12 SSQRQKLIVTVHKCRNLPPCDSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPV   76 (127)
T ss_pred             eCCCCEEEEEEEEEECCCCccCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEec
Confidence            455788999999995      24788999999986     5789999999999999999655444

KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=97.23  E-value=0.00041  Score=81.09  Aligned_cols=135  Identities=22%  Similarity=0.289  Sum_probs=97.4

Q ss_pred             eeecCCCCCCCchhhHHHHHhc------CCCcccceecccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCCh
Q 008959           84 TAISDNTDKPIWNSEKKLLLET------NGPHVARISVFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIE  152 (547)
Q Consensus        84 T~vi~~tLnP~Wne~~kll~e~------~~~~~~~isl~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~  152 (547)
                      |..+.+.+-..|++.+++....      ....-..-+++|.+.. +.-+|+.||.+.+|.+    |..+++++++.-|..
T Consensus      2210 t~~st~GlaqqwdQl~qL~~rMqhnlEQqIqarn~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmv 2289 (2399)
T KOG0040|consen 2210 TEHSTVGLAQQWDQLDQLMMRMQHNLEQQIQARNHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMV 2289 (2399)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCccc
Confidence            3445566777899988876621      1111222233444443 7789999999999998    888889988865543


Q ss_pred             HH---HHHHHHHHHhhcCCCCCcccHHHHHHHHHhc--CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          153 TE---KSFARRILSIVDYNQDGQLSFKEFSDLISAF--GNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       153 ~e---~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l--g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      ++   .+.++.++..+|++.+|+|+..|+..+|..-  ..-.+.++++.+|+.+|. +.-+|+.+|+.+-|.
T Consensus      2290 Ee~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~lt 2360 (2399)
T KOG0040|consen 2290 EEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQNLT 2360 (2399)
T ss_pred             ccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhcCC
Confidence            33   3458899999999999999999999988663  223566789999999998 778899988876653

>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

Probab=97.23  E-value=0.00026  Score=63.19  Aligned_cols=53  Identities=13%  Similarity=0.116  Sum_probs=42.5

Q ss_pred             ccceeEEEEEEeecc----c---ccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE----M---KFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~----~---~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +.-.|.|.|+|++|+    +   ++..|||+.+.+.     ....||+++++++||+|||.+..-
T Consensus        11 ~~~~~~L~V~vi~a~~L~~~d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~   75 (125)
T cd08393          11 DPKLRELHVHVIQCQDLAAADPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYK   75 (125)
T ss_pred             ECCCCEEEEEEEEeCCCCCcCCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEE
Confidence            444678999999995    2   3678999999884     346899999999999999955443

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=97.23  E-value=0.00074  Score=50.74  Aligned_cols=48  Identities=27%  Similarity=0.436  Sum_probs=38.1

Q ss_pred             Cchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          134 SNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       134 dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +|.|    +..++..++...+++++   +..+|..+|.|++|.|+++||..++..
T Consensus         2 ~G~i~~~~~~~~l~~~g~~~~s~~e---~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen    2 DGKITREEFRRALSKLGIKDLSEEE---VDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             SSEEEHHHHHHHHHHTTSSSSCHHH---HHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             cCEECHHHHHHHHHHhCCCCCCHHH---HHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            5666    55666555552277777   999999999999999999999999864

...

>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7

Probab=97.22  E-value=0.00035  Score=61.97  Aligned_cols=51  Identities=14%  Similarity=0.140  Sum_probs=42.0

Q ss_pred             cceeEEEEEEeecc------cccCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHH
Q 008959           51 DFAGIALLTLISAE------MKFKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        51 ~~~gi~~i~~~~A~------~~~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .-.+.|+|+|++|+      ..++.|||+.+.+   +.+..||++++++++|+|||.+..
T Consensus        13 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~~P~Wne~f~f   72 (125)
T cd08386          13 FQESTLTLKILKAVELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLF   72 (125)
T ss_pred             CCCCEEEEEEEEecCCCCccCCCCCCceEEEEECCCCCcceeeeeecCCCCCccceeEEE
Confidence            34568999999995      2567899999988   567899999999999999995543

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves

>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family

Probab=97.22  E-value=0.00031  Score=64.52  Aligned_cols=49  Identities=20%  Similarity=0.289  Sum_probs=42.8

Q ss_pred             eeEEEEEEeecc-cccCCceEEEEEcccceE-eeeecCCCCCCCchhhHHH
Q 008959           53 AGIALLTLISAE-MKFKDKWLACVSLGEQTC-RTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        53 ~gi~~i~~~~A~-~~~~dd~~~~v~~g~~~f-rT~vi~~tLnP~Wne~~kl  101 (547)
                      ..-|.|.|+||+ +.-+++|||.+.++++.+ ||+++.++.||.|+|.|.+
T Consensus        10 ~~sL~v~V~EAk~Lp~~~~~Y~~i~Ld~~~vaRT~v~~~~~nP~W~E~F~f   60 (146)
T cd04013          10 ENSLKLWIIEAKGLPPKKRYYCELCLDKTLYARTTSKLKTDTLFWGEHFEF   60 (146)
T ss_pred             EEEEEEEEEEccCCCCcCCceEEEEECCEEEEEEEEEcCCCCCcceeeEEe
Confidence            345899999996 567789999999999985 9999999999999996665

SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas

>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group

Probab=97.21  E-value=0.00034  Score=62.21  Aligned_cols=49  Identities=16%  Similarity=0.182  Sum_probs=39.9

Q ss_pred             EEEEEEeecc------cccCCceEEEEEccc---ceEeeeecCCCCCCCchhhHHHHH
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLGE---QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g~---~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      .+.|+|++|+      ..++.|||+.+..+.   +.+||++++++++|+|||.+...+
T Consensus         2 ~~~V~v~~a~~L~~~~~~~~~Dpyv~v~~~~~~~~~~kT~~~~~t~~P~Wne~f~f~i   59 (126)
T cd04043           2 LFTIRIVRAENLKADSSNGLSDPYVTLVDTNGKRRIAKTRTIYDTLNPRWDEEFELEV   59 (126)
T ss_pred             EEEEEEEEeECCCCCCCCCCCCceEEEEECCCCeeeecccEecCCCCCcccceEEEEc
Confidence            5789999995      356789999998764   478999999999999999665544

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap

>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins

Probab=97.20  E-value=0.00031  Score=63.41  Aligned_cols=54  Identities=13%  Similarity=0.078  Sum_probs=43.7

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcc-------cceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLG-------EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g-------~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.-.+.|+|+|++|+      ..+..|||+.+.+.       ....||+++++++||+|||.+..-+
T Consensus        12 ~~~~~~L~V~Vi~A~~L~~~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i   78 (133)
T cd04009          12 RASEQSLRVEILNARNLLPLDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNV   78 (133)
T ss_pred             cCCCCEEEEEEEEeeCCCCcCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEe
Confidence            444578999999995      34678999999885       5689999999999999999655544

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s

>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13

Probab=97.19  E-value=0.00018  Score=65.52  Aligned_cols=55  Identities=20%  Similarity=0.181  Sum_probs=42.0

Q ss_pred             cccccceeEEEEEEeecc----c----ccCCceEEEEEcccc-----eEeeeecCCCCCCCchhhHHH
Q 008959           47 LNEEDFAGIALLTLISAE----M----KFKDKWLACVSLGEQ-----TCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        47 ~~~~~~~gi~~i~~~~A~----~----~~~dd~~~~v~~g~~-----~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ++-..-.|-|.|.|++|+    +    .+..|||+++.+..+     .-||++.++++||+|||.+..
T Consensus         8 L~Y~~~~~~L~V~V~karnL~~~d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F   75 (138)
T cd08407           8 ISYLPAANRLLVVVIKAKNLHSDQLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMF   75 (138)
T ss_pred             EEEeCCCCeEEEEEEEecCCCccccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEE
Confidence            333556788999999995    2    144799999987763     458999999999999994433

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy

>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase

Probab=97.19  E-value=0.00041  Score=61.94  Aligned_cols=49  Identities=29%  Similarity=0.413  Sum_probs=41.4

Q ss_pred             EEEEEEeeccc-----ccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHH
Q 008959           55 IALLTLISAEM-----KFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~~-----~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      .|+|+|++|++     .++.|||+.+.++++ ..||++++++++|+||+.+.+.+
T Consensus         3 ~L~V~i~~a~l~~~~~~~~~dPyv~v~~~~~~~~kT~v~~~t~~P~Wne~f~~~~   57 (125)
T cd04021           3 QLQITVESAKLKSNSKSFKPDPYVEVTVDGQPPKKTEVSKKTSNPKWNEHFTVLV   57 (125)
T ss_pred             eEEEEEEeeECCCCCcCCCCCeEEEEEECCcccEEeeeeCCCCCCccccEEEEEe
Confidence            47899999964     456899999999988 99999999999999999665543

E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e

>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins

Probab=97.16  E-value=0.00026  Score=61.82  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=35.0

Q ss_pred             ccccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHH
Q 008959           64 EMKFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        64 ~~~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ++.+++||||.+.++++ .+||+++++++||+||+.+...+
T Consensus         8 ~~~G~~dPYv~v~v~~~~~~kT~v~~~t~nP~Wne~f~f~v   48 (111)
T cd04052           8 SKTGLLSPYAELYLNGKLVYTTRVKKKTNNPSWNASTEFLV   48 (111)
T ss_pred             ccCCCCCceEEEEECCEEEEEEeeeccCCCCccCCceEEEe
Confidence            46788999999999875 68999999999999999777665

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family

Probab=97.15  E-value=0.00045  Score=61.22  Aligned_cols=50  Identities=12%  Similarity=0.108  Sum_probs=41.1

Q ss_pred             ceeEEEEEEeecc----c-ccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHH
Q 008959           52 FAGIALLTLISAE----M-KFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        52 ~~gi~~i~~~~A~----~-~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -.|.|.|+|++|+    + .+.+||||.+.++.     ...||++.++++||+|||.+..
T Consensus        10 ~~~~L~V~Vi~ar~L~~~~~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f   69 (119)
T cd08685          10 QNRKLTLHVLEAKGLRSTNSGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSF   69 (119)
T ss_pred             cCCEEEEEEEEEECCCCCCCCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEE
Confidence            3578999999995    2 45789999999874     4779999999999999995544

This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=97.14  E-value=0.0011  Score=58.55  Aligned_cols=56  Identities=21%  Similarity=0.336  Sum_probs=44.1

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      +.-.|..+|.|+||.| ..++.... . .+.+..   +..+|+.+|.|+||.||++||...+
T Consensus        50 l~w~F~~lD~d~DG~Ls~~EL~~~~-l-~~~e~~---~~~f~~~~D~n~Dg~IS~~Ef~~cl  106 (116)
T cd00252          50 VGWMFNQLDGNYDGKLSHHELAPIR-L-DPNEHC---IKPFFESCDLDKDGSISLDEWCYCF  106 (116)
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHH-c-cchHHH---HHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            8889999999999999 33333221 1 233344   7889999999999999999999988

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein

Probab=97.10  E-value=0.00057  Score=60.95  Aligned_cols=47  Identities=17%  Similarity=0.268  Sum_probs=38.9

Q ss_pred             EEEEEeecc----cccCCceEEEEEcc--cceEeeeecCCCCCCCchhhHHHH
Q 008959           56 ALLTLISAE----MKFKDKWLACVSLG--EQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        56 ~~i~~~~A~----~~~~dd~~~~v~~g--~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      |.|+|++|+    ..+++|||+++.++  .+.+||+++++++||+||+.+...
T Consensus         1 l~v~v~~A~~L~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~Wne~f~f~   53 (126)
T cd08678           1 LLVKNIKANGLSEAAGSSNPYCVLEMDEPPQKYQSSTQKNTSNPFWDEHFLFE   53 (126)
T ss_pred             CEEEEEEecCCCCCCCCcCCEEEEEECCCCcEEEeEEEecCCCCccCceEEEE
Confidence            568889995    24789999999998  467999999999999999965443

The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a

>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3

Probab=97.10  E-value=0.00053  Score=61.64  Aligned_cols=53  Identities=21%  Similarity=0.178  Sum_probs=43.1

Q ss_pred             ccceeEEEEEEeecc-c------ccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE-M------KFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~-~------~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +.-.+.|.|+|++|+ +      ++..||||.+.+.     .+..||++.++++||+|||.+..-
T Consensus        11 ~~~~~~L~V~V~~a~nL~~~d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~   75 (128)
T cd08392          11 NFRTSCLEITIKACRNLAYGDEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYV   75 (128)
T ss_pred             eCCCCEEEEEEEecCCCCccCCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEE
Confidence            556689999999995 1      3778999999885     347899999999999999955443

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids

>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42)

Probab=97.09  E-value=0.00047  Score=61.86  Aligned_cols=47  Identities=19%  Similarity=0.191  Sum_probs=39.1

Q ss_pred             EEEEEEeecc------cccCCceEEEEEcccc-------eEeeeecCCCCCCCchhhHHH
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLGEQ-------TCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g~~-------~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +|+|+|++|+      ..++.|||+++.++.+       ..||++++++++|+||+.+..
T Consensus         1 ~L~v~Vi~a~~L~~~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f   60 (133)
T cd04033           1 ILRVKVLAGIDLAKKDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFF   60 (133)
T ss_pred             CEEEEEEEeECCCcccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEE
Confidence            4899999994      3567899999999765       579999999999999995443

Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=97.09  E-value=0.00059  Score=43.19  Aligned_cols=25  Identities=32%  Similarity=0.646  Sum_probs=22.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      ++++|+.+|.|+||.|+.+||.+++
T Consensus         1 l~~~F~~~D~d~DG~is~~E~~~~~   25 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEEFQRLV   25 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence            4678999999999999999999864

...

>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16

Probab=97.06  E-value=0.00026  Score=64.46  Aligned_cols=57  Identities=14%  Similarity=0.180  Sum_probs=45.3

Q ss_pred             cccccceeEEEEEEeecc------cccCCceEEEEEccc------ceEeeeecCCCCCCCchhhHHHHH
Q 008959           47 LNEEDFAGIALLTLISAE------MKFKDKWLACVSLGE------QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        47 ~~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~------~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ++-+...|.|.|+|++|+      ..+..|||+.+.+..      ...||++.++++||+|||.+..-+
T Consensus         8 L~Y~~~~~~L~V~VikarnL~~~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i   76 (138)
T cd08408           8 LEYNALTGRLSVEVIKGSNFKNLAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQV   76 (138)
T ss_pred             eEEcCCCCeEEEEEEEecCCCccccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEEC
Confidence            334667899999999994      467889999998853      257999999999999999655444

Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle

>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins

Probab=97.02  E-value=0.00054  Score=59.78  Aligned_cols=48  Identities=23%  Similarity=0.276  Sum_probs=38.4

Q ss_pred             EEEEEeecc------cccCCceEEEEEccc-ceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGE-QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~-~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|++|+      ..++.|||+++.+++ +.++|++..++++|+||+.+...+
T Consensus         1 l~v~vi~a~~L~~~~~~~~~dpyv~v~~~~~~~~~T~v~~~~~~P~Wne~f~~~~   55 (115)
T cd04040           1 LTVDVISAENLPSADRNGKSDPFVKFYLNGEKVFKTKTIKKTLNPVWNESFEVPV   55 (115)
T ss_pred             CEEEEEeeeCCCCCCCCCCCCCeEEEEECCCcceeeceecCCCCCcccccEEEEe
Confidence            578999995      245788999998864 668999999999999999554443

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs)

Probab=97.01  E-value=0.00056  Score=59.78  Aligned_cols=47  Identities=23%  Similarity=0.270  Sum_probs=38.8

Q ss_pred             EEEEEeecc-c--ccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE-M--KFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~-~--~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|++|+ +  .+.+||||++.++++ .+||++.++ ++|+|||.+...+
T Consensus         2 L~v~vi~a~~l~~~~~~dpyv~v~~~~~~~~kT~~~~~-~~P~Wne~f~f~v   52 (117)
T cd08383           2 LRLRILEAKNLPSKGTRDPYCTVSLDQVEVARTKTVEK-LNPFWGEEFVFDD   52 (117)
T ss_pred             eEEEEEEecCCCcCCCCCceEEEEECCEEeEecceEEC-CCCcccceEEEec
Confidence            678999995 1  278999999999985 589999999 9999999655544

RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]

Probab=96.98  E-value=0.0011  Score=66.91  Aligned_cols=97  Identities=13%  Similarity=0.150  Sum_probs=76.1

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCC--C-CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSV--E-DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~--~-~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~  196 (547)
                      +..+|.+||.+++|.+ +.+....+..  . .-+.+-   ++.+|++|+.+.||.+.-.+|..+++. +|  ...-++-.
T Consensus       261 l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~i---iq~afk~f~v~eDg~~ge~~ls~ilq~~lg--v~~l~v~~  335 (412)
T KOG4666|consen  261 LAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVI---IQYAFKRFSVAEDGISGEHILSLILQVVLG--VEVLRVPV  335 (412)
T ss_pred             hhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHH---HHHHHHhcccccccccchHHHHHHHHHhcC--cceeeccc
Confidence            8899999999999998 5554433321  1 222333   889999999999999999999998876 55  44446778


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      +|...+...||+|++++|++++...++
T Consensus       336 lf~~i~q~d~~ki~~~~f~~fa~~~p~  362 (412)
T KOG4666|consen  336 LFPSIEQKDDPKIYASNFRKFAATEPN  362 (412)
T ss_pred             cchhhhcccCcceeHHHHHHHHHhCch
Confidence            899999999999999999999976554

>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1

Probab=96.98  E-value=0.00069  Score=61.22  Aligned_cols=51  Identities=18%  Similarity=0.154  Sum_probs=41.5

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~k  100 (547)
                      ..-.|.|+|+|++|+      ..+..|||+.+.++.     +..||++++++++|+||+.+.
T Consensus        11 ~~~~~~l~V~Vi~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~   72 (136)
T cd08402          11 VPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFS   72 (136)
T ss_pred             cCCCCeEEEEEEEeeCCCcccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEE
Confidence            445689999999995      356789999999842     467899999999999999443

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:

>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17

Probab=96.98  E-value=0.00075  Score=61.07  Aligned_cols=51  Identities=24%  Similarity=0.250  Sum_probs=40.6

Q ss_pred             cceeEEEEEEeecc------cccCCceEEEEEc--cc---ceEeeeecCCCCCCCchhhHHH
Q 008959           51 DFAGIALLTLISAE------MKFKDKWLACVSL--GE---QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        51 ~~~gi~~i~~~~A~------~~~~dd~~~~v~~--g~---~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .-.|.|.|+|++|+      ..+..|||+.+.+  |.   ++.+|+++++++||+|||.+..
T Consensus        11 ~~~~~L~V~vi~a~~L~~~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f   72 (135)
T cd08410          11 PSAGRLNVDIIRAKQLLQTDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSF   72 (135)
T ss_pred             CCCCeEEEEEEEecCCCcccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEE
Confidence            34588999999995      3567899999987  32   3578999999999999995543

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-

>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length

Probab=96.96  E-value=0.00051  Score=62.41  Aligned_cols=50  Identities=22%  Similarity=0.194  Sum_probs=43.6

Q ss_pred             hhhhhhhhhhhccCcccc-----cccchhHHHHHHHHHHHHHHhhCCccccccHH
Q 008959          318 DVKIVMSMRAIYQSKIGL-----GLMDIGTKELLKSISEKQGRKMNSVESSKEIP  367 (547)
Q Consensus       318 ~~~~~~~~~~~y~~~~g~-----~~l~~~~~~~~~~~s~~~g~~~~s~~S~~~I~  367 (547)
                      .+.+++||+++..+++|.     +|+++.||..+|.|.+.||.|+.||.|+.++.
T Consensus        69 ~glvG~P~naiLdwpM~T~sG~a~F~~p~vN~~lK~ILn~W~~fL~sp~S~~vL~  123 (141)
T PF12588_consen   69 VGLVGFPMNAILDWPMGTPSGYAFFLDPDVNAQLKKILNEWGEFLSSPASRSVLN  123 (141)
T ss_pred             CCccccChHHHHHhhccChHHHHHHcCHHHHHHHHHHHHHHHHHcCChhhhcccc
Confidence            456678999999888874     78999999999999999999999999998653

The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.

>PLN03200 cellulose synthase-interactive protein; Provisional

Probab=96.94  E-value=0.00059  Score=84.43  Aligned_cols=57  Identities=12%  Similarity=0.234  Sum_probs=49.1

Q ss_pred             ccceeEEEEEEeecc----cccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHHhcC
Q 008959           50 EDFAGIALLTLISAE----MKFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLLETN  106 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~----~~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~e~~  106 (547)
                      +...|.|+|+|++|+    ..+++|||+++.+|++ .-||++++++.||+||+.+...++..
T Consensus      1976 ~~~~G~L~V~V~~a~nl~~~~~~sdPyv~l~~g~~~~~kTkvvk~~~nP~Wne~f~~~~~~p 2037 (2102)
T PLN03200       1976 QCLPGSLTVTIKRGNNLKQSMGNTNAFCKLTLGNGPPRQTKVVSHSSSPEWKEGFTWAFDSP 2037 (2102)
T ss_pred             hhCCcceEEEEeeccccccccCCCCCeEEEEECCCCcccccccCCCCCCCcccceeeeecCC
Confidence            678999999999995    3467899999999977 78999999999999999777766443

>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins

Probab=96.94  E-value=0.00087  Score=61.67  Aligned_cols=52  Identities=21%  Similarity=0.172  Sum_probs=41.8

Q ss_pred             ceeEEEEEEeecc-c------ccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHHHH
Q 008959           52 FAGIALLTLISAE-M------KFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        52 ~~gi~~i~~~~A~-~------~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      -.|.|.|+|++|+ +      .+..||||.+.+..     ..-||++.++++||+|||.+..-+
T Consensus        27 ~~~~L~V~Vi~ArnL~~~~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v   90 (146)
T cd04028          27 KKGQLEVEVIRARGLVQKPGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDV   90 (146)
T ss_pred             CCCEEEEEEEEeeCCCcccCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEE
Confidence            4699999999994 2      24579999999843     267999999999999999665544

RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=96.92  E-value=0.0016  Score=54.50  Aligned_cols=61  Identities=25%  Similarity=0.269  Sum_probs=45.6

Q ss_pred             HHHHHHhhCCC--CCchh----HHHHhhhcCCCCCC----hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPS--SSNKI----VGKISLSCSVEDPI----ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d--~dG~I----l~~ll~~l~~~~~~----~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|..|+..  .+|.|    +..++.......++    +.+   +..+|+.+|.|++|.|+++||..++..+
T Consensus        10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~---v~~i~~~~D~d~dG~I~f~eF~~~~~~~   80 (88)
T cd05030          10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKA---IDKIFEDLDTNQDGQLSFEEFLVLVIKV   80 (88)
T ss_pred             HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHH---HHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            67889999876  36777    66666432222232    444   9999999999999999999999998754

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15

Probab=96.92  E-value=0.00046  Score=62.71  Aligned_cols=54  Identities=17%  Similarity=0.170  Sum_probs=41.9

Q ss_pred             ccceeEEEEEEeecc-c----ccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE-M----KFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~-~----~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +...+-|.|+|++|+ +    ....||||.+.+..     +..||++.++++||+|||.+..-+
T Consensus        11 ~~~~~~L~V~V~~a~nL~~~~~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i   74 (137)
T cd08409          11 NPTLNRLTVVVLRARGLRQLDHAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKV   74 (137)
T ss_pred             CCCCCeEEEEEEEecCCCcccCCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEEC
Confidence            455678999999995 2    35589999998754     366999999999999999554433

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id

>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins

Probab=96.90  E-value=0.00086  Score=59.53  Aligned_cols=49  Identities=29%  Similarity=0.341  Sum_probs=40.9

Q ss_pred             EEEEEEeecc------cccCCceEEEEEccc-ceEeeeecC-CCCCCCchhhHHHHH
Q 008959           55 IALLTLISAE------MKFKDKWLACVSLGE-QTCRTAISD-NTDKPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~------~~~~dd~~~~v~~g~-~~frT~vi~-~tLnP~Wne~~kll~  103 (547)
                      .|+|+|++|+      ..++.||||++.++. +.++|++.. .+.+|.||+.+.+.+
T Consensus         1 ~L~V~V~sA~~L~~~~~~~~~dpYv~v~~~~~~~~~T~~~~~~~~~P~Wne~f~f~v   57 (125)
T cd04051           1 TLEITIISAEDLKNVNLFGKMKVYAVVWIDPSHKQSTPVDRDGGTNPTWNETLRFPL   57 (125)
T ss_pred             CEEEEEEEcccCCCCCcccCCceEEEEEECCCcccccccccCCCCCCCCCCEEEEEc
Confidence            3789999995      357899999999988 999999985 589999999655544

SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such

>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins

Probab=96.89  E-value=0.0012  Score=58.37  Aligned_cols=53  Identities=19%  Similarity=0.184  Sum_probs=42.2

Q ss_pred             cccceeEEEEEEeecc-------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHH
Q 008959           49 EEDFAGIALLTLISAE-------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        49 ~~~~~gi~~i~~~~A~-------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -+.-.|.|.|+|++|+       ..+..|||+.+.+.     ....||++.+++++|+|||.+..
T Consensus         9 y~~~~~~L~V~v~~a~~L~~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f   73 (123)
T cd08521           9 YNYKTGSLEVHIKECRNLAYADEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKY   73 (123)
T ss_pred             EeCCCCEEEEEEEEecCCCCcCCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEE
Confidence            3566789999999994       24678999998773     14689999999999999995544

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into

>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17

Probab=96.87  E-value=0.0013  Score=58.16  Aligned_cols=53  Identities=13%  Similarity=0.085  Sum_probs=42.5

Q ss_pred             cccceeEEEEEEeecc-------cccCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHH
Q 008959           49 EEDFAGIALLTLISAE-------MKFKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        49 ~~~~~gi~~i~~~~A~-------~~~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -+.-.+.|.|+|++|+       ..+..|||+.+.+   +.+..||++++++++|+|||.+..
T Consensus         9 y~~~~~~L~V~v~~a~~L~~~~~~~~~~dpyV~v~l~~~~~~~~~T~v~~~~~~P~wne~f~f   71 (123)
T cd08390           9 YDLEEEQLTVSLIKARNLPPRTKDVAHCDPFVKVCLLPDERRSLQSKVKRKTQNPNFDETFVF   71 (123)
T ss_pred             ECCCCCEEEEEEEEecCCCCccCCCCCCCcEEEEEEeeCCCCceEeeeEcCCCCCccceEEEE
Confidence            3556788999999994       2456799999887   456789999999999999995443

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat

>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking

Probab=96.77  E-value=0.00066  Score=54.96  Aligned_cols=48  Identities=29%  Similarity=0.378  Sum_probs=41.5

Q ss_pred             EEEEEeecc------cccCCceEEEEEccc---ceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGE---QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~---~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |.|+|++|+      ...+.+||+.+.++.   ..++|++..++.+|.||+.+.+.+
T Consensus         1 L~v~I~~a~~L~~~~~~~~~~~yv~v~~~~~~~~~~~T~~~~~~~~P~w~e~~~~~~   57 (85)
T PF00168_consen    1 LTVTIHSARNLPSKDSNGKPDPYVRVSVNGSESTKYKTKVKKNTSNPVWNEEFEFPL   57 (85)
T ss_dssp             EEEEEEEEESSSSSSTTSSBEEEEEEEEETTTCEEEEECCBSSBSSEEEEEEEEEEE
T ss_pred             CEEEEEEEECCCCcccCCcccccceeecceeeeeeeeeeeeeccccceeeeeeeeee
Confidence            689999995      456888999999999   889999999999999999666654

C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....

>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10

Probab=96.76  E-value=0.0015  Score=58.92  Aligned_cols=52  Identities=27%  Similarity=0.196  Sum_probs=41.7

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ....|.|+|+|++|+      ..++.|||+.+.++.     +..||++++++++|+||+.+..
T Consensus        10 ~~~~~~L~V~v~~A~~L~~~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f   72 (134)
T cd08403          10 LPTAGRLTLTIIKARNLKAMDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVF   72 (134)
T ss_pred             cCCCCEEEEEEEEeeCCCccccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEE
Confidence            445789999999995      356789999998742     3679999999999999995443

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind

>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain

Probab=96.70  E-value=0.002  Score=57.07  Aligned_cols=54  Identities=17%  Similarity=0.053  Sum_probs=42.7

Q ss_pred             ccccceeEEEEEEeecc------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHH
Q 008959           48 NEEDFAGIALLTLISAE------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        48 ~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .-+...+.|+|+|++|+      .....|||+.+.+.     .+..||++++++++|+||+.+..
T Consensus         9 ~y~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f   73 (123)
T cd04035           9 LYDPANSALHCTIIRAKGLKAMDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTY   73 (123)
T ss_pred             EEeCCCCEEEEEEEEeeCCCCCCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEE
Confidence            33556688999999995      24577899988862     35789999999999999995543

Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain

>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4

Probab=96.69  E-value=0.0016  Score=58.79  Aligned_cols=53  Identities=13%  Similarity=0.073  Sum_probs=41.2

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcc--c---ceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLG--E---QTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g--~---~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +...+.|.|+|++|+      ..+..|||+.+.+.  .   ...||+++++++||+|||.+..-
T Consensus        11 ~~~~~~L~V~vi~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~   74 (136)
T cd08404          11 QPTTNRLTVVVLKARHLPKMDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFD   74 (136)
T ss_pred             eCCCCeEEEEEEEeeCCCccccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEE
Confidence            445678999999995      35678999999873  2   25789999999999999955443

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s

>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma

Probab=96.61  E-value=0.002  Score=57.66  Aligned_cols=50  Identities=18%  Similarity=0.125  Sum_probs=41.5

Q ss_pred             eEEEEEEeecc------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHHH
Q 008959           54 GIALLTLISAE------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        54 gi~~i~~~~A~------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |.|+|+|++|+      .....|||+.+.++     .+.+||++++++++|.||+.+..-+
T Consensus        13 ~~l~v~i~~a~nL~~~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~   73 (131)
T cd04026          13 NKLTVEVREAKNLIPMDPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDL   73 (131)
T ss_pred             CEEEEEEEEeeCCCCcCCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeC
Confidence            88999999995      23468999999986     3789999999999999999655543

A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd

>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs)

Probab=96.61  E-value=0.0014  Score=59.54  Aligned_cols=48  Identities=19%  Similarity=0.199  Sum_probs=40.2

Q ss_pred             EEEEEeecc----c-ccCCceEEEEEcc----cceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE----M-KFKDKWLACVSLG----EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~----~-~~~dd~~~~v~~g----~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |+|+|++|+    + .++.|||+.+.++    .+..||++++++++|+||+.+..-+
T Consensus         1 L~V~Vi~A~~L~~~~~g~~dPyv~v~~~~~~~~~~~rT~vv~~t~nP~Wne~f~f~~   57 (137)
T cd08675           1 LSVRVLECRDLALKSNGTCDPFARVTLNYSSKTDTKRTKVKKKTNNPRFDEAFYFEL   57 (137)
T ss_pred             CEEEEEEccCCCcccCCCCCcEEEEEEecCCcCCeeccceeeCCCCCCcceEEEEEc
Confidence            578899995    2 4688999999999    8999999999999999999544433

RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin

>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1)

Probab=96.57  E-value=0.0026  Score=57.94  Aligned_cols=48  Identities=29%  Similarity=0.436  Sum_probs=38.6

Q ss_pred             EEEEEeecc-----cccCCceEEEEEcc-------------cceEeeeecCCCCCCCc-hhhHHHHH
Q 008959           56 ALLTLISAE-----MKFKDKWLACVSLG-------------EQTCRTAISDNTDKPIW-NSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~-----~~~~dd~~~~v~~g-------------~~~frT~vi~~tLnP~W-ne~~kll~  103 (547)
                      ..|.+++|+     +.++.|||+.+.+.             .+..||+++++++||+| ||.+...+
T Consensus         3 ~~~~~~~A~~L~~~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v   69 (137)
T cd08691           3 FSLSGLQARNLKKGMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVG   69 (137)
T ss_pred             EEEEEEEeCCCCCccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEc
Confidence            457788884     35789999999884             25799999999999999 99666655

NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C

>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin

Probab=96.53  E-value=0.0019  Score=57.60  Aligned_cols=39  Identities=26%  Similarity=0.367  Sum_probs=34.1

Q ss_pred             cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           65 MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        65 ~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ..++.|||+++.++.+..||++++++++|+||+.+...+
T Consensus        11 ~~g~~Dpyv~v~~~~~~~kT~v~~~~~nP~Wne~f~f~~   49 (127)
T cd08373          11 LKGKGDRIAKVTFRGVKKKTRVLENELNPVWNETFEWPL   49 (127)
T ss_pred             cCCCCCCEEEEEECCEeeecceeCCCcCCcccceEEEEe
Confidence            456899999999999999999999999999999655544

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>cd08680 C2_Kibra C2 domain found in Human protein Kibra

Probab=96.50  E-value=0.002  Score=57.59  Aligned_cols=55  Identities=16%  Similarity=0.180  Sum_probs=43.5

Q ss_pred             cccceeEEEEEEeecc------cccCCceEEEEEcc------cceEeeeecCCCCCCCchhhHHHHH
Q 008959           49 EEDFAGIALLTLISAE------MKFKDKWLACVSLG------EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        49 ~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g------~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      =+.-.|.|.|+|++|+      ..+..|||+.+.+=      ...+||++.++++||+|||.+..-+
T Consensus         9 Y~~~~~~L~V~V~~arnL~~~~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v   75 (124)
T cd08680           9 YDSGDSSLVISVEQLRNLSALSIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPI   75 (124)
T ss_pred             ECCCCCEEEEEEeEecCCcccccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEEC
Confidence            3666789999999995      25678999888842      3589999999999999999655443

Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=96.49  E-value=0.004  Score=65.41  Aligned_cols=101  Identities=18%  Similarity=0.315  Sum_probs=69.0

Q ss_pred             hHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc--------
Q 008959          119 SDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF--------  185 (547)
Q Consensus       119 ~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l--------  185 (547)
                      +.+ ++..|..+|+...|.|    |.+++..... -..+.....+++.-+.++.+ +-.||++||.+...-+        
T Consensus       316 q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~-~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~l~dfd~  393 (489)
T KOG2643|consen  316 QEEILELEFERFDKGDSGAISEVDFAELLLAYAG-VNSKKKHKYLKRVKEKFKDD-GKGISLQEFKAFFRFLNNLNDFDI  393 (489)
T ss_pred             HHHHHHHHHHHhCcccccccCHHHHHHHHHHHcc-cchHhHHHHHHHHHHhccCC-CCCcCHHHHHHHHHHHhhhhHHHH
Confidence            444 6778999999988988    6665554432 22333344577777777766 4568888888765422        


Q ss_pred             --------CCcchHH-----------------HHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          186 --------GNQVAAN-----------------KKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       186 --------g~~~~~e-----------------el~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                              |..++..                 -++-+|..||.|+||.|+.+||..+|++-
T Consensus       394 Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~R  454 (489)
T KOG2643|consen  394 ALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRR  454 (489)
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHH
Confidence                    1122222                 23446888999999999999999999874

>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]

Probab=96.46  E-value=0.013  Score=55.54  Aligned_cols=93  Identities=17%  Similarity=0.249  Sum_probs=66.4

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchH-HHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAA-NKKE  195 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~-eel~  195 (547)
                      ...+|..||.|.||.|    ++.++..++. +.+..-   ++.+.+.+|.|.||+|+|.||.-++.. ....+.. ..+.
T Consensus       101 ~~~~Fk~yDe~rDgfIdl~ELK~mmEKLga-pQTHL~---lK~mikeVded~dgklSfreflLIfrkaaagEL~~ds~~~  176 (244)
T KOG0041|consen  101 AESMFKQYDEDRDGFIDLMELKRMMEKLGA-PQTHLG---LKNMIKEVDEDFDGKLSFREFLLIFRKAAAGELQEDSGLL  176 (244)
T ss_pred             HHHHHHHhcccccccccHHHHHHHHHHhCC-chhhHH---HHHHHHHhhcccccchhHHHHHHHHHHHhccccccchHHH
Confidence            7789999999999999    5566777775 333333   899999999999999999999998876 2223333 3333


Q ss_pred             HHH--HHhcCCCCCCcCHHHHHHHH
Q 008959          196 ELF--KAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       196 ~~F--~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      .+=  ...|....|.--...|-+.-
T Consensus       177 ~LAr~~eVDVskeGV~GAknFFeAK  201 (244)
T KOG0041|consen  177 RLARLSEVDVSKEGVSGAKNFFEAK  201 (244)
T ss_pred             HHHHhcccchhhhhhhhHHHHHHHH
Confidence            332  33677777777666665543

>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]

Probab=96.44  E-value=0.0038  Score=66.01  Aligned_cols=95  Identities=23%  Similarity=0.313  Sum_probs=72.7

Q ss_pred             HHhhCCCCCchhHHHHhhhcCCCCCChHHHHHHHHHHH----hhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHh
Q 008959          126 FDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILS----IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAA  201 (547)
Q Consensus       126 F~~~D~d~dG~Il~~ll~~l~~~~~~~~e~~~l~~~f~----~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~  201 (547)
                      |-.+|.|.||.+-++-+..-+....+   ..+++++|.    .+=.-.+|++++++|..++.++....+..-++-.|+.+
T Consensus       284 FweLD~Dhd~lidk~~L~ry~d~tlt---~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrcl  360 (493)
T KOG2562|consen  284 FWELDTDHDGLIDKEDLKRYGDHTLT---ERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCL  360 (493)
T ss_pred             HhhhccccccccCHHHHHHHhccchh---hHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhheeee
Confidence            55779999998833333322222333   234888998    34445789999999999999887777888899999999


Q ss_pred             cCCCCCCcCHHHHHHHHHhhhc
Q 008959          202 DKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       202 D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      |.+++|.|+.+|+.-+......
T Consensus       361 Dld~~G~Lt~~el~~fyeeq~~  382 (493)
T KOG2562|consen  361 DLDGDGILTLNELRYFYEEQLQ  382 (493)
T ss_pred             eccCCCcccHHHHHHHHHHHHH
Confidence            9999999999999988877543

>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16

Probab=96.43  E-value=0.0025  Score=56.77  Aligned_cols=52  Identities=17%  Similarity=0.245  Sum_probs=40.3

Q ss_pred             cccceeEEEEEEeecc------cccCCceEEEEE---cccceEeeeecCCCCCCCchhhHHH
Q 008959           49 EEDFAGIALLTLISAE------MKFKDKWLACVS---LGEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        49 ~~~~~gi~~i~~~~A~------~~~~dd~~~~v~---~g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      =+...+.|.|+|++|+      .++.+|||+.+.   ...+..||++.+. +||+|||.+..
T Consensus        11 Y~~~~~~L~V~Vi~a~nL~~~~~~~~~d~yVk~~llp~~~~~~kTkv~~~-~nP~fnE~F~f   71 (124)
T cd08389          11 YDPSARKLTVTVIRAQDIPTKDRGGASSWQVHLVLLPSKKQRAKTKVQRG-PNPVFNETFTF   71 (124)
T ss_pred             ECCCCCEEEEEEEEecCCCchhcCCCCCcEEEEEEccCCcceeecccccC-CCCcccCEEEE
Confidence            3566788999999995      357788886643   3457899999888 99999995555

Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=96.40  E-value=0.0017  Score=57.07  Aligned_cols=60  Identities=27%  Similarity=0.385  Sum_probs=44.3

Q ss_pred             HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHH
Q 008959          155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAA  216 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~  216 (547)
                      ...+.-.|..+|.|+||.|+..|+..+...+  ...+.-++.+|+..|.|+||.||..|+..
T Consensus        53 ~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~  112 (113)
T PF10591_consen   53 KRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN  112 (113)
T ss_dssp             HHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred             hhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence            3447888999999999999999999886654  24445688899999999999999999864

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=96.38  E-value=0.0027  Score=66.61  Aligned_cols=67  Identities=21%  Similarity=0.315  Sum_probs=48.5

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhc------CC--------cch-HHHHHHHH--HHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAF------GN--------QVA-ANKKEELF--KAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~l------g~--------~~~-~eel~~~F--~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+-+|++||.|+||.|+.+||..+++-+      |.        ..+ .-++...+  .-|.++++++++++||.++++.
T Consensus       235 F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~  314 (489)
T KOG2643|consen  235 FRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQEN  314 (489)
T ss_pred             ceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHHHH
Confidence            6789999999999999999999887432      11        000 01222222  3479999999999999999998


Q ss_pred             hhcc
Q 008959          221 QQEK  224 (547)
Q Consensus       221 l~~~  224 (547)
                      +.+.
T Consensus       315 Lq~E  318 (489)
T KOG2643|consen  315 LQEE  318 (489)
T ss_pred             HHHH
Confidence            8653

>cd04048 C2A_Copine C2 domain first repeat in Copine

Probab=96.22  E-value=0.0025  Score=56.28  Aligned_cols=36  Identities=17%  Similarity=0.092  Sum_probs=30.5

Q ss_pred             ccCCceEEEEEcccce-------EeeeecCCCCCCCchhhHHH
Q 008959           66 KFKDKWLACVSLGEQT-------CRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        66 ~~~dd~~~~v~~g~~~-------frT~vi~~tLnP~Wne~~kl  101 (547)
                      .++.|||+.+.++...       .||++++++++|+||+.+..
T Consensus        18 ~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f   60 (120)
T cd04048          18 LSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTV   60 (120)
T ss_pred             CCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEE
Confidence            4678999999998764       99999999999999995444

There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma

>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC)

Probab=96.08  E-value=0.005  Score=54.56  Aligned_cols=49  Identities=16%  Similarity=0.290  Sum_probs=38.7

Q ss_pred             EEEEEEeecc-c-------ccCCceEEEEEc------ccceEeeeecCCCC-CCCchhhHHHHH
Q 008959           55 IALLTLISAE-M-------KFKDKWLACVSL------GEQTCRTAISDNTD-KPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~-~-------~~~dd~~~~v~~------g~~~frT~vi~~tL-nP~Wne~~kll~  103 (547)
                      .|+|+|++|+ +       .++.|||+.+.+      +.+.+||+++.++. +|+|||.+....
T Consensus         3 ~l~v~vi~a~~L~~~~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~   66 (128)
T cd00275           3 TLTIKIISGQQLPKPKGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDV   66 (128)
T ss_pred             EEEEEEEeeecCCCCCCCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEE
Confidence            4789999995 1       457899999998      56789999988775 999999554443

PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking

>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

Probab=96.08  E-value=0.0075  Score=56.02  Aligned_cols=50  Identities=14%  Similarity=0.016  Sum_probs=37.5

Q ss_pred             eEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHHHH
Q 008959           54 GIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        54 gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |-|.|..+.+.      -.++.|||+.+.+     +.+..||+++++|+||+|||.+.+.+
T Consensus         4 ~el~i~~~~~~~l~~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I   64 (155)
T cd08690           4 IELTIVRCIGIPLPSGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNI   64 (155)
T ss_pred             eEEEEEEeeccccCCCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEe
Confidence            44555555552      2667899999975     56899999999999999999655433

Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha

>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A

Probab=96.06  E-value=0.014  Score=50.53  Aligned_cols=62  Identities=23%  Similarity=0.420  Sum_probs=45.8

Q ss_pred             cccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          115 VFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       115 l~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      +++.+.+ ...+|+.+|+ ++|.+    ...++...   ....+.   +..+|...|.|++|+++++||.-+|.
T Consensus         4 ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S---~L~~~~---L~~IW~LaD~~~dG~L~~~EF~iAm~   70 (104)
T PF12763_consen    4 LSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKS---GLPRDV---LAQIWNLADIDNDGKLDFEEFAIAMH   70 (104)
T ss_dssp             -SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHT---TSSHHH---HHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHc---CCCHHH---HHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence            3445555 8999999886 57888    33444433   344555   99999999999999999999999885

...

>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin

Probab=96.05  E-value=0.0056  Score=54.70  Aligned_cols=49  Identities=20%  Similarity=0.121  Sum_probs=40.2

Q ss_pred             ceeEEEEEEeecc------cccCCceEEEEEcccc-----eEeeeecCCCCCCCchhhHH
Q 008959           52 FAGIALLTLISAE------MKFKDKWLACVSLGEQ-----TCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        52 ~~gi~~i~~~~A~------~~~~dd~~~~v~~g~~-----~frT~vi~~tLnP~Wne~~k  100 (547)
                      -.|.|.|.|++|+      .....|||+.+.+...     ..||++++++.+|.||+.+.
T Consensus        12 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~   71 (134)
T cd00276          12 TAERLTVVVLKARNLPPSDGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFS   71 (134)
T ss_pred             CCCEEEEEEEEeeCCCCccCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEE
Confidence            3578999999995      2557899999988653     77999999999999999543

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin

>smart00054 EFh EF-hand, calcium binding motif

Probab=95.68  E-value=0.012  Score=36.56  Aligned_cols=26  Identities=38%  Similarity=0.678  Sum_probs=13.6

Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      ++.+|+.+|.+++|.|+++||..++.
T Consensus         2 ~~~~f~~~d~~~~g~i~~~e~~~~~~   27 (29)
T smart00054        2 LKEAFRLFDKDGDGKIDFEEFKDLLK   27 (29)
T ss_pred             HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            34455555555555555555555543

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>cd04047 C2B_Copine C2 domain second repeat in Copine

Probab=95.64  E-value=0.018  Score=49.74  Aligned_cols=32  Identities=25%  Similarity=0.316  Sum_probs=27.0

Q ss_pred             ccCCceEEEEEcccc------eEeeeecCCCCCCCchh
Q 008959           66 KFKDKWLACVSLGEQ------TCRTAISDNTDKPIWNS   97 (547)
Q Consensus        66 ~~~dd~~~~v~~g~~------~frT~vi~~tLnP~Wne   97 (547)
                      .++.|||+++..+..      .+||+++++++||+||+
T Consensus        18 ~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn~   55 (110)
T cd04047          18 FGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWKP   55 (110)
T ss_pred             CCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceEE
Confidence            457899999887543      69999999999999994

There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=95.56  E-value=0.041  Score=65.29  Aligned_cols=72  Identities=21%  Similarity=0.372  Sum_probs=62.9

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcc--hHH-----HHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV--AAN-----KKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~--~~e-----el~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+++...++..+|+.||.+.+|.++..+|...|+.+|-.+  .++     ++++++...|++.+|+|+..|+.++|-..
T Consensus      2247 VtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2247 VTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred             CCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc
Confidence            4566667788999999999999999999999999988654  233     79999999999999999999999999664

>PLN03008 Phospholipase D delta

Probab=95.35  E-value=0.0097  Score=67.97  Aligned_cols=38  Identities=16%  Similarity=0.378  Sum_probs=34.1

Q ss_pred             ccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHH
Q 008959           66 KFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        66 ~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ..++||||+|.+|++ ..||+++++++||+|||.+.+.+
T Consensus        74 ~~tSDPYV~I~Lg~~rv~RTrVi~n~~NPvWNE~F~f~v  112 (868)
T PLN03008         74 VITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISI  112 (868)
T ss_pred             cCCCCceEEEEECCcceeeEEeCCCCCCCCcceeEEEEe
Confidence            578899999999987 67999999999999999877766

>KOG4065 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.31  E-value=0.041  Score=47.73  Aligned_cols=58  Identities=26%  Similarity=0.348  Sum_probs=45.2

Q ss_pred             HHHHhhcCCCCCcccHHHHHHHHHhc------CC----cchHHHHHHHHH----HhcCCCCCCcCHHHHHHH
Q 008959          160 RILSIVDYNQDGQLSFKEFSDLISAF------GN----QVAANKKEELFK----AADKNGDGVVSVDELAAL  217 (547)
Q Consensus       160 ~~f~~~D~d~dG~Is~~Ef~~~l~~l------g~----~~~~eel~~~F~----~~D~d~dG~Is~~Ef~~~  217 (547)
                      -.|++.|.|++|.|+=-|+..++...      |.    -.++.+++.++.    .-|.|+||+|+|.||...
T Consensus        71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~  142 (144)
T KOG4065|consen   71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR  142 (144)
T ss_pred             hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence            47999999999999999999998753      22    135566666554    458899999999999764

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=95.30  E-value=0.03  Score=59.68  Aligned_cols=49  Identities=22%  Similarity=0.336  Sum_probs=42.2

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..+|.|+||.| ..+++.              ...+|+.+|.|+||.|+++||..++..
T Consensus       336 l~~aF~~~D~dgdG~Is~~E~~~--------------~~~~F~~~D~d~DG~Is~eEf~~~~~~  385 (391)
T PRK12309        336 AQEIFRLYDLDGDGFITREEWLG--------------SDAVFDALDLNHDGKITPEEMRAGLGA  385 (391)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHH--------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            7889999999999998 555531              467899999999999999999998864

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=95.18  E-value=0.053  Score=53.00  Aligned_cols=96  Identities=21%  Similarity=0.281  Sum_probs=69.7

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhh-------cCCCCCChHH-HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLS-------CSVEDPIETE-KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAAN  192 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~-------l~~~~~~~~e-~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~e  192 (547)
                      ++++...+|+|+|..+ ..++..-       ..+++....+ ....++.=..+|.|.||.++++|+..++..+.......
T Consensus       238 VkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~aln  317 (362)
T KOG4251|consen  238 VKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALN  317 (362)
T ss_pred             HHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHH
Confidence            4667788999999887 3333221       1122222222 22344555678999999999999999987777677778


Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHH
Q 008959          193 KKEELFKAADKNGDGVVSVDELAAL  217 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~  217 (547)
                      ++..++...|.+++.+++.+|+.+-
T Consensus       318 e~~~~ma~~d~n~~~~Ls~eell~r  342 (362)
T KOG4251|consen  318 EVNDIMALTDANNDEKLSLEELLER  342 (362)
T ss_pred             HHHHHHhhhccCCCcccCHHHHHHH
Confidence            8889999999999999999998763

>smart00239 C2 Protein kinase C conserved region 2 (CalB)

Probab=95.03  E-value=0.023  Score=46.77  Aligned_cols=46  Identities=30%  Similarity=0.368  Sum_probs=37.8

Q ss_pred             EEEEEeecc------cccCCceEEEEEcccc---eEeeeecCCCCCCCchhhHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGEQ---TCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~~---~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.|+|++|+      .....+||+.+.++..   ..+|+++.++.+|.||+.+.+
T Consensus         2 l~i~i~~~~~l~~~~~~~~~~~yv~v~~~~~~~~~~~T~~~~~~~~P~w~e~~~~   56 (101)
T smart00239        2 LTVKIISARNLPKKDKKGKSDPYVKVSLDGDPKEKKKTKVVKNTLNPVWNETFEF   56 (101)
T ss_pred             eEEEEEEeeCCCCCCCCCCCCceEEEEEeCCccceEeeeEecCCCCCcccceEEE
Confidence            678999994      1246889999999885   899999999999999994433

Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.

>smart00054 EFh EF-hand, calcium binding motif

Probab=94.97  E-value=0.03  Score=34.72  Aligned_cols=27  Identities=33%  Similarity=0.724  Sum_probs=24.6

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|+.+|.+++|.|++.||..++..
T Consensus         2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~   28 (29)
T smart00054        2 LKEAFRLFDKDGDGKIDFEEFKDLLKA   28 (29)
T ss_pred             HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            678999999999999999999998864

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=94.86  E-value=0.11  Score=54.76  Aligned_cols=96  Identities=20%  Similarity=0.260  Sum_probs=56.2

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHH-HHhhcCCCCCcccHHHHHHHHHhcC------Ccc-
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRI-LSIVDYNQDGQLSFKEFSDLISAFG------NQV-  189 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~-f~~~D~d~dG~Is~~Ef~~~l~~lg------~~~-  189 (547)
                      +...|+.+|+++.|++    ...++.....-...      |+.+ =+....+.||.+.+.+..+.+..-+      ..+ 
T Consensus       466 L~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LP------Wr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slv  539 (631)
T KOG0377|consen  466 LEDEFRKYDPKKSGKLSISHWAKCMENITGLNLP------WRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLV  539 (631)
T ss_pred             HHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCc------HHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHH
Confidence            5666777777777776    22344443332211      2211 1223344556666666555543211      001 


Q ss_pred             -----hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          190 -----AANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       190 -----~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                           ....++.+|..+|.|++|.||.+||+++..-+..
T Consensus       540 etLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~s  578 (631)
T KOG0377|consen  540 ETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSS  578 (631)
T ss_pred             HHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHh
Confidence                 1124678899999999999999999998877654

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=94.79  E-value=0.1  Score=43.95  Aligned_cols=59  Identities=19%  Similarity=0.245  Sum_probs=40.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|..|-.+ ++.+    +..++..     +.. ...+   ..+..+++.+|.|+||.|+|.||..++..+
T Consensus        10 lI~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l~~-~~d~---~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l   77 (91)
T cd05024          10 MMLTFHKFAGE-KNYLNRDDLQKLMEKEFSEFLKN-QNDP---MAVDKIMKDLDDCRDGKVGFQSFFSLIAGL   77 (91)
T ss_pred             HHHHHHHHcCC-CCcCCHHHHHHHHHHHhHHHHcC-CCCH---HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            67788888733 3355    4444321     111 1122   348999999999999999999999998764

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]

Probab=94.70  E-value=0.023  Score=66.38  Aligned_cols=51  Identities=24%  Similarity=0.315  Sum_probs=42.8

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +|=|.|.+.+|+      ..+.+|||+++.+.++ .|||++.+++|||+|||.+..-+
T Consensus      1039 sG~l~I~~~~~~nl~~~d~ng~sDpfv~~~ln~k~vyktkv~KktlNPvwNEe~~i~v 1096 (1227)
T COG5038        1039 SGYLTIMLRSGENLPSSDENGYSDPFVKLFLNEKSVYKTKVVKKTLNPVWNEEFTIEV 1096 (1227)
T ss_pred             cCcEEEEEeccCCCcccccCCCCCceEEEEecceecccccchhccCCCCccccceEee
Confidence            688888888884      5777888888888887 99999999999999999555444

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=94.51  E-value=0.067  Score=52.31  Aligned_cols=66  Identities=32%  Similarity=0.372  Sum_probs=50.6

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcc--hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQV--AANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~--~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.+..+|+..|.|.||+|+-.|+++.+.. ..+-+  .-++-+-.|+..|.|+||.|+++||.--+...
T Consensus       101 rklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlas  169 (362)
T KOG4251|consen  101 RKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLAS  169 (362)
T ss_pred             HHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhh
Confidence            34889999999999999999999997765 22211  12344556888999999999999998755444

>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus)

Probab=94.34  E-value=0.042  Score=49.79  Aligned_cols=54  Identities=9%  Similarity=0.167  Sum_probs=38.9

Q ss_pred             ccccceeEEEEEEeecc-c-----ccCCceEEEEEcc---c--ceEeeeecCCCC-CCCchhhHHH
Q 008959           48 NEEDFAGIALLTLISAE-M-----KFKDKWLACVSLG---E--QTCRTAISDNTD-KPIWNSEKKL  101 (547)
Q Consensus        48 ~~~~~~gi~~i~~~~A~-~-----~~~dd~~~~v~~g---~--~~frT~vi~~tL-nP~Wne~~kl  101 (547)
                      +=-...|.|.|.|++|+ +     ....||||.+.+-   .  ..-||++.++++ +|+|||.+-.
T Consensus         8 ~Y~p~~~rLtV~VikarnL~~~~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~F   73 (135)
T cd08692           8 CFQAVNSRIQLQILEAQNLPSSSTPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIF   73 (135)
T ss_pred             eecCcCCeEEEEEEEccCCCcccCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEE
Confidence            33566789999999995 2     3444679887553   2  367888999996 6999994433

Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.27  E-value=0.039  Score=60.39  Aligned_cols=67  Identities=19%  Similarity=0.357  Sum_probs=49.3

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHHhcCCCc-ccceecccChHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPH-VARISVFEDSDA  121 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~e~~~~~-~~~isl~e~~~e  121 (547)
                      ...+.|+|+-|+      -.+++|||+-..+|+..=||+.|-.+|||+|||  +.-+|..+.. ..++-++++++.
T Consensus       294 sakitltvlcaqgl~akdktg~sdpyvt~qv~ktkrrtrti~~~lnpvw~e--kfhfechnstdrikvrvwded~d  367 (1283)
T KOG1011|consen  294 SAKITLTVLCAQGLIAKDKTGKSDPYVTAQVGKTKRRTRTIHQELNPVWNE--KFHFECHNSTDRIKVRVWDEDND  367 (1283)
T ss_pred             ceeeEEeeeecccceecccCCCCCCcEEEeecccchhhHhhhhccchhhhh--heeeeecCCCceeEEEEecCccc
Confidence            345667777774      478999999999999999999999999999999  4444333332 234455666555

>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]

Probab=94.25  E-value=0.14  Score=54.74  Aligned_cols=46  Identities=22%  Similarity=0.496  Sum_probs=32.4

Q ss_pred             cccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          172 QLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       172 ~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+++.||.+++..    ...|..+++|+..|+.++|.||.-+|..+|...
T Consensus       163 ~~ny~~f~Q~lh~----~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~  208 (694)
T KOG0751|consen  163 HLNYAEFTQFLHE----FQLEHAEQAFREKDKAKNGFISVLDFQDIMVTI  208 (694)
T ss_pred             hccHHHHHHHHHH----HHHHHHHHHHHHhcccCCCeeeeechHhhhhhh
Confidence            3444444444433    334557788999999999999998888888764

>cd00030 C2 C2 domain

Probab=94.09  E-value=0.071  Score=43.41  Aligned_cols=48  Identities=31%  Similarity=0.423  Sum_probs=38.6

Q ss_pred             EEEEEeecc------cccCCceEEEEEccc-ceEeeeecCCCCCCCchhhHHHHH
Q 008959           56 ALLTLISAE------MKFKDKWLACVSLGE-QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        56 ~~i~~~~A~------~~~~dd~~~~v~~g~-~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.|+|++|+      .....++|+.+.+.. +.++|+++..+++|.||+.+..-.
T Consensus         1 l~v~i~~~~~l~~~~~~~~~~~~v~v~~~~~~~~~T~~~~~~~~P~w~~~~~~~~   55 (102)
T cd00030           1 LRVTVIEARNLPAKDLNGKSDPYVKVSLGGKQKFKTKVVKNTLNPVWNETFEFPV   55 (102)
T ss_pred             CEEEEEeeeCCCCcCCCCCCCcEEEEEeccCceEecceeCCCCCCcccceEEEEc
Confidence            457888884      345788999999988 999999999999999999544433

The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=93.73  E-value=0.027  Score=59.24  Aligned_cols=65  Identities=20%  Similarity=0.243  Sum_probs=44.4

Q ss_pred             eEEEEEEeecc----c--ccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHHHH-hcCCCcccceecccC
Q 008959           54 GIALLTLISAE----M--KFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKLLL-ETNGPHVARISVFED  118 (547)
Q Consensus        54 gi~~i~~~~A~----~--~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kll~-e~~~~~~~~isl~e~  118 (547)
                      ..|.|.|.+|+    |  .+-+|||+.+.+     +...-||++|+.+|||+|||++..-+ ..+.+....+.+|+|
T Consensus       180 ~~l~v~i~ea~NLiPMDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEvWDW  256 (683)
T KOG0696|consen  180 DVLTVTIKEAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEVWDW  256 (683)
T ss_pred             ceEEEEehhhccccccCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEEecc
Confidence            45778888885    3  666777777764     44567889999999999999765433 233333445555666

>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]

Probab=93.23  E-value=0.44  Score=51.15  Aligned_cols=54  Identities=30%  Similarity=0.473  Sum_probs=24.4

Q ss_pred             hcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          165 VDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       165 ~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .|.-+||-|+++||+.+=.-+-  .++...+.+|+.||+.++|.+|++++.+++.+
T Consensus        83 aD~tKDglisf~eF~afe~~lC--~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~  136 (694)
T KOG0751|consen   83 ADQTKDGLISFQEFRAFESVLC--APDALFEVAFQLFDRLGNGEVSFEDVADIFGQ  136 (694)
T ss_pred             hhhcccccccHHHHHHHHhhcc--CchHHHHHHHHHhcccCCCceehHHHHHHHhc
Confidence            3444555555555544322111  12333344455555555555555555555444

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=93.16  E-value=0.17  Score=41.58  Aligned_cols=62  Identities=13%  Similarity=0.304  Sum_probs=51.7

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHh-cCC-cchHHHHHHHHHHhcCC----CCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISA-FGN-QVAANKKEELFKAADKN----GDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~-~~~~eel~~~F~~~D~d----~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|..+-. +.+.|+.++|...|.. .+. ..+.+++++++..+..+    ..+.+|+++|..+|..
T Consensus         2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S   69 (83)
T PF09279_consen    2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS   69 (83)
T ss_dssp             HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred             HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence            7889999955 7899999999999977 444 46889999999998655    4789999999999955

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins

Probab=93.08  E-value=0.11  Score=45.62  Aligned_cols=53  Identities=25%  Similarity=0.325  Sum_probs=35.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD  180 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~  180 (547)
                      +.=.|..+|.|+||.+    +..+...+   .+.+.-   ++..|+..|.|+||.||+.|+..
T Consensus        56 ~~W~F~~LD~n~d~~L~~~El~~l~~~l---~~~e~C---~~~F~~~CD~n~d~~Is~~EW~~  112 (113)
T PF10591_consen   56 VHWKFCQLDRNKDGVLDRSELKPLRRPL---MPPEHC---ARPFFRSCDVNKDGKISLDEWCN  112 (113)
T ss_dssp             HHHHHHHH--T-SSEE-TTTTGGGGSTT---STTGGG---HHHHHHHH-TT-SSSEEHHHHHH
T ss_pred             hhhhHhhhcCCCCCccCHHHHHHHHHHH---hhhHHH---HHHHHHHcCCCCCCCCCHHHHcc
Confidence            6778999999999998    33333323   233434   67889999999999999999864

SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.

>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A

Probab=92.89  E-value=0.23  Score=37.01  Aligned_cols=44  Identities=23%  Similarity=0.338  Sum_probs=30.8

Q ss_pred             HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          138 VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       138 l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+++.++. ..++..   +..+|+..|.+++|.+..+||..++..+
T Consensus         7 vk~lLk~~NI-~~~~~y---A~~LFq~~D~s~~g~Le~~Ef~~Fy~~L   50 (51)
T PF14788_consen    7 VKKLLKMMNI-EMDDEY---ARQLFQECDKSQSGRLEGEEFEEFYKRL   50 (51)
T ss_dssp             HHHHHHHTT-----HHH---HHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred             HHHHHHHHcc-CcCHHH---HHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence            3445565654 344444   8889999999999999999999988653

...

>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]

Probab=92.40  E-value=0.094  Score=61.47  Aligned_cols=54  Identities=24%  Similarity=0.340  Sum_probs=42.6

Q ss_pred             ccceeEEEEEEeecc--------cccCCceEEEEEccc-ceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE--------MKFKDKWLACVSLGE-QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~--------~~~~dd~~~~v~~g~-~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      -..+|||-|+|.+|+        +..+-|||..+.+.. -.=||++.++++||+|||++-+++
T Consensus       432 ~~aIGVv~vkI~sa~~lk~~d~~i~~~vDpyit~~~~~r~~gkT~v~~nt~nPvwNEt~Yi~l  494 (1227)
T COG5038         432 GTAIGVVEVKIKSAEGLKKSDSTINGTVDPYITVTFSDRVIGKTRVKKNTLNPVWNETFYILL  494 (1227)
T ss_pred             CCeeEEEEEEEeeccCcccccccccCCCCceEEEEeccccCCccceeeccCCccccceEEEEe
Confidence            356899999999995        477778887777322 233999999999999999877666

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=91.58  E-value=1.1  Score=50.89  Aligned_cols=93  Identities=23%  Similarity=0.274  Sum_probs=73.1

Q ss_pred             HHHHHHhhCCCCCchh-HH---HHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VG---KISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~---~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      +..+|+..|.+++|.+ +.   .++..+.. ....   ..++.+|+..|..++|++...++..+...+....   ++..+
T Consensus       138 i~~~~~~ad~~~~~~~~~~~~~~~~~~~n~-~l~~---~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp---ev~~~  210 (746)
T KOG0169|consen  138 IHSIFQEADKNKNGHMSFDEVLDLLKQLNV-QLSE---SKARRLFKESDNSQTGKLEEEEFVKFRKELTKRP---EVYFL  210 (746)
T ss_pred             HHHHHHHHccccccccchhhHHHHHHHHHH-hhhH---HHHHHHHHHHHhhccceehHHHHHHHHHhhccCc---hHHHH
Confidence            8899999999999998 33   34444432 2222   2378889999999999999999999988766443   88888


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      |..+-.+ .++++.+++..++...+
T Consensus       211 f~~~s~~-~~~ls~~~L~~Fl~~~q  234 (746)
T KOG0169|consen  211 FVQYSHG-KEYLSTDDLLRFLEEEQ  234 (746)
T ss_pred             HHHHhCC-CCccCHHHHHHHHHHhc
Confidence            8887655 89999999999998874

>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae

Probab=91.25  E-value=0.19  Score=43.48  Aligned_cols=64  Identities=16%  Similarity=0.272  Sum_probs=44.9

Q ss_pred             EEEEEeecc---------cccCCceEEEEEcccc-eEeeeecCCCCCCCchhhHHHHHhcCCCcccceecccChHHHHHH
Q 008959           56 ALLTLISAE---------MKFKDKWLACVSLGEQ-TCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEV  125 (547)
Q Consensus        56 ~~i~~~~A~---------~~~~dd~~~~v~~g~~-~frT~vi~~tLnP~Wne~~kll~e~~~~~~~~isl~e~~~el~~~  125 (547)
                      |.|.|.+|+         ...+.++|+++.++.. ..||++.   .||+||+.|..-++  ......+.           
T Consensus         1 L~I~V~~~RdvdH~~~~~~~~~~etyV~IKved~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~-----------   64 (109)
T cd08689           1 LTITITSARDVDHIASPRFSKRPETYVSIKVEDVERARTKPS---RNDRWNEDFEIPVE--KNNEEEVI-----------   64 (109)
T ss_pred             CEEEEEEEecCccccchhhccCCCcEEEEEECCEEEEeccCC---CCCcccceEEEEec--CCcEEEEE-----------
Confidence            356666662         4778899999999999 8999885   79999996655552  23333333           


Q ss_pred             HHhhCCCCCchh
Q 008959          126 FDLLDPSSSNKI  137 (547)
Q Consensus       126 F~~~D~d~dG~I  137 (547)
                        .||..++-.+
T Consensus        65 --VyDk~~~~~~   74 (109)
T cd08689          65 --VYDKGGDQPV   74 (109)
T ss_pred             --EEeCCCCeec
Confidence              6777766654

This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]

Probab=90.53  E-value=0.44  Score=48.69  Aligned_cols=65  Identities=17%  Similarity=0.217  Sum_probs=57.0

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.++.+|..||.+++|.+++.|-...+.- .+...+.+.++-+|+.|+.+.||.+.-.+|.-+++.
T Consensus       259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~  324 (412)
T KOG4666|consen  259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQV  324 (412)
T ss_pred             hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHH
Confidence            34889999999999999999998877765 577788899999999999999999999988887755

>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin

Probab=90.33  E-value=0.9  Score=42.65  Aligned_cols=35  Identities=26%  Similarity=0.367  Sum_probs=29.4

Q ss_pred             chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          189 VAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       189 ~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      ..++..+++|..+++.+.+.+|..|+.++++...+
T Consensus        93 Fvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~  127 (174)
T PF05042_consen   93 FVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRN  127 (174)
T ss_pred             CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccc
Confidence            45568999999999999999999999999976443

Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.

>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]

Probab=90.18  E-value=0.33  Score=56.11  Aligned_cols=78  Identities=15%  Similarity=0.037  Sum_probs=58.0

Q ss_pred             CCCCcccccccc-ccceeEEEEEEeecc------cccCCceEEEEEcccce--EeeeecCCCCCCCchhhHHHHHhcCCC
Q 008959           38 SGSHHHNRVLNE-EDFAGIALLTLISAE------MKFKDKWLACVSLGEQT--CRTAISDNTDKPIWNSEKKLLLETNGP  108 (547)
Q Consensus        38 ~~~~~~~~~~~~-~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~--frT~vi~~tLnP~Wne~~kll~e~~~~  108 (547)
                      ++.+...+-+.+ +++--.+||.|++|-      -.++.|||+++++|.+.  -+++-+.+++||++++.+++-..-...
T Consensus       596 p~~pr~~~~~~~~~pi~~LvrVyvv~A~~L~p~D~ng~adpYv~l~lGk~~~~d~~~yip~tlnPVfgkmfel~~~lp~e  675 (1105)
T KOG1326|consen  596 PAPPRHFLDLPKEEPIKCLVRVYVVEAFSLQPSDGNGDADPYVKLLLGKKRTLDRAHYIPNTLNPVFGKMFELECLLPFE  675 (1105)
T ss_pred             CCChhhhhcccccCcceeeEEEEEEEeeeccccCCCCCcCceeeeeeccchhhhhhhcCcCCCCcHHHHHHHhhcccchh
Confidence            334455555555 599999999999992      48889999999999998  455679999999999977765533333


Q ss_pred             cccceec
Q 008959          109 HVARISV  115 (547)
Q Consensus       109 ~~~~isl  115 (547)
                      +.-.+.+
T Consensus       676 k~l~v~v  682 (1105)
T KOG1326|consen  676 KDLIVEV  682 (1105)
T ss_pred             hcceeEE
Confidence            3444443

>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]

Probab=89.18  E-value=0.88  Score=48.85  Aligned_cols=71  Identities=13%  Similarity=0.273  Sum_probs=59.2

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..++++.+....-|+.+..|-.|+|+=.--..++..  ..++-+|+..+++..|.|.||-++++||+..|.-.
T Consensus       224 ~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtK--Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLV  294 (737)
T KOG1955|consen  224 QITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTK--SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLV  294 (737)
T ss_pred             ccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhh--ccCchHHHHHHHhhcccCccccccHHHHHhhHhhe
Confidence            456777777888899999999999998766666654  34778899999999999999999999999988764

>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]

Probab=88.60  E-value=1  Score=48.29  Aligned_cols=91  Identities=10%  Similarity=0.191  Sum_probs=64.4

Q ss_pred             HHHHHH----hhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-------C
Q 008959          122 DSEVFD----LLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-------G  186 (547)
Q Consensus       122 l~~~F~----~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-------g  186 (547)
                      +.++|+    .+-.-.+|.+    +-.++.++.. ..+..-   ++-.|+.+|.+++|.|+..|+..+....       +
T Consensus       313 vdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~-k~t~~S---leYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~  388 (493)
T KOG2562|consen  313 VDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEED-KDTPAS---LEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMG  388 (493)
T ss_pred             HHHHHhhccccceeeecCcccHHHHHHHHHHhcc-CCCccc---hhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcC
Confidence            567777    3334456777    4455566554 233333   7889999999999999999998877542       2


Q ss_pred             -Ccch-HHHHHHHHHHhcCCCCCCcCHHHHHH
Q 008959          187 -NQVA-ANKKEELFKAADKNGDGVVSVDELAA  216 (547)
Q Consensus       187 -~~~~-~eel~~~F~~~D~d~dG~Is~~Ef~~  216 (547)
                       +.++ ++-+.+++........++||..+|..
T Consensus       389 ~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~  420 (493)
T KOG2562|consen  389 QEALPFEDALCQIRDMVKPEDENKITLQDLKG  420 (493)
T ss_pred             CCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence             1222 34567888888888899999999987

>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=87.88  E-value=0.48  Score=51.24  Aligned_cols=53  Identities=15%  Similarity=0.081  Sum_probs=40.6

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEccc---ceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGE---QTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~---~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      |-=..-|.|+|++|.      .++.+|||+.+.+-.   ..++|++.++++||+|||.+..-
T Consensus       163 d~~~~~L~V~V~qa~~Lp~~d~~g~sdpyVK~~llPdk~~k~kT~v~r~tlnP~fnEtf~f~  224 (421)
T KOG1028|consen  163 DFELNLLTVRVIQAHDLPAKDRGGTSDPYVKVYLLPDKKGKFKTRVHRKTLNPVFNETFRFE  224 (421)
T ss_pred             cccCCEEEEEEEEecCCCcccCCCCCCCeeEEEEcCCCCCcceeeeeecCcCCccccceEee
Confidence            444567889999994      245578998877654   57999999999999999955443

>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]

Probab=87.40  E-value=0.9  Score=46.79  Aligned_cols=61  Identities=18%  Similarity=0.194  Sum_probs=53.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      +.-||..+|.|.||.++..|+..+-..    -.+.-++.+|...|...||.|+-+|+...+...+
T Consensus       252 ~gWMFnklD~N~Dl~Ld~sEl~~I~ld----knE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~  312 (434)
T KOG3555|consen  252 LGWMFNKLDTNYDLLLDQSELRAIELD----KNEACIKPFFNSCDTYKDGSISTNEWCYCFQKSD  312 (434)
T ss_pred             hhhhhhccccccccccCHHHhhhhhcc----CchhHHHHHHhhhcccccCccccchhhhhhccCC
Confidence            889999999999999999999887632    4556789999999999999999999999986643

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]

Probab=86.38  E-value=1.4  Score=47.97  Aligned_cols=63  Identities=19%  Similarity=0.235  Sum_probs=47.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg  186 (547)
                      +++.|...| |++|++    +..++...+.-. .....++++.++...+.|.+|.|+|+||..++..+.
T Consensus        21 l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~-g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~   87 (627)
T KOG0046|consen   21 LKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL-GYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLK   87 (627)
T ss_pred             HHHHHHhhc-CCCCeeehHHhHHHHHHhcccc-cchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhh
Confidence            889999999 999998    555555544311 111223389999999999999999999999876643

>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]

Probab=85.52  E-value=0.57  Score=47.87  Aligned_cols=67  Identities=19%  Similarity=0.303  Sum_probs=52.3

Q ss_pred             HHHHHHHhhcCCCCCcccHHHHHHHHHhcC-CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          157 FARRILSIVDYNQDGQLSFKEFSDLISAFG-NQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       157 ~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      .+.-.|..+|.|.++.|...|+..+=.-+- ......-.+.+|+..|.|+|-.||++|++..+....+
T Consensus       334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~~~  401 (421)
T KOG4578|consen  334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVEKE  401 (421)
T ss_pred             eeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhccccc
Confidence            466789999999999999999665443322 2234456788999999999999999999998866544

>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin

Probab=85.12  E-value=4.9  Score=37.80  Aligned_cols=62  Identities=18%  Similarity=0.228  Sum_probs=45.8

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCc-------chHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQ-------VAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~-------~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      +.++++|..++..+.+.+++.|+..|+..-...       -..-|...++.. -.|.||.+..|+++.+.
T Consensus        96 ~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L-~~d~dG~l~Ke~iR~vY  164 (174)
T PF05042_consen   96 QKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYIL-AKDKDGFLSKEDIRGVY  164 (174)
T ss_pred             HHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHH-HcCcCCcEeHHHHhhhc
Confidence            448899999999999999999999999763221       122344444444 46779999999998876

Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=84.29  E-value=2.7  Score=47.73  Aligned_cols=72  Identities=24%  Similarity=0.426  Sum_probs=63.6

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      ......+..+|+..|++.+|.+++.|...++..+...+.+..+..+|+..|..+++.+..+++.++......
T Consensus       132 ~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~  203 (746)
T KOG0169|consen  132 SRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK  203 (746)
T ss_pred             chHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc
Confidence            344456889999999999999999999999999988899999999999999889999999999988877643

>PLN02223 phosphoinositide phospholipase C

Probab=83.99  E-value=1  Score=49.77  Aligned_cols=49  Identities=18%  Similarity=0.306  Sum_probs=36.7

Q ss_pred             eeEEEEEEeeccc---c--------cCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHH
Q 008959           53 AGIALLTLISAEM---K--------FKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        53 ~gi~~i~~~~A~~---~--------~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ..+|.|+|++|+.   .        ...|||+.|.+.+     ...||.+..++.||+||+.++.
T Consensus       408 ~~~L~V~Visgq~~~~~~~k~~~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F  472 (537)
T PLN02223        408 VKILKVKIYMGDGWIVDFKKRIGRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTF  472 (537)
T ss_pred             ceEEEEEEEEcccccCCcccccCCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEE
Confidence            4679999999962   1        2346888887654     3568888899999999996544

>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=83.16  E-value=2.5  Score=46.54  Aligned_cols=75  Identities=12%  Similarity=0.173  Sum_probs=66.2

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhcc
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEK  224 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~  224 (547)
                      .+.++....+..|..+|.|+.|.++..+...+|.+.+...+++.+.+..+..|.+-+|++...||.+++......
T Consensus       587 ~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~g  661 (680)
T KOG0042|consen  587 LTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKNG  661 (680)
T ss_pred             cCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhcC
Confidence            345666667789999999999999999999999998888999999999999999999999999999999776543

>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]

Probab=82.38  E-value=5.6  Score=44.17  Aligned_cols=103  Identities=17%  Similarity=0.280  Sum_probs=64.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCC--CCcccHHHHHHHHHh-----------
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQ--DGQLSFKEFSDLISA-----------  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~--dG~Is~~Ef~~~l~~-----------  184 (547)
                      +.++|.+.|.|.||.+    +..+...+-..+.+..+.+.++...+..-.+|  ++.++..-|+.+-..           
T Consensus       197 l~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfiergr~EttW  276 (625)
T KOG1707|consen  197 LKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIERGRHETTW  276 (625)
T ss_pred             HHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHhccccchh
Confidence            7889999999999987    55555555544555555444444444333332  334455445443221           


Q ss_pred             -----cCC-----------------------cchH---HHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhcc
Q 008959          185 -----FGN-----------------------QVAA---NKKEELFKAADKNGDGVVSVDELAALLALQQEK  224 (547)
Q Consensus       185 -----lg~-----------------------~~~~---eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~  224 (547)
                           .|.                       .++.   +-+..+|..+|.|+||.++-.||..++...+..
T Consensus       277 ~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~  347 (625)
T KOG1707|consen  277 TILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGS  347 (625)
T ss_pred             hhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCC
Confidence                 111                       0111   236788999999999999999999999887654

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=81.33  E-value=1.9  Score=48.81  Aligned_cols=59  Identities=24%  Similarity=0.429  Sum_probs=33.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      .+.+|..+|+..+|+++=..=..+|...+  ++...+..++..-|.|+||.++.+||.-.|
T Consensus       197 Y~QlFNa~DktrsG~Lsg~qaR~aL~qS~--Lpq~~LA~IW~LsDvd~DGkL~~dEfilam  255 (1118)
T KOG1029|consen  197 YRQLFNALDKTRSGYLSGQQARSALGQSG--LPQNQLAHIWTLSDVDGDGKLSADEFILAM  255 (1118)
T ss_pred             HHHHhhhcccccccccccHHHHHHHHhcC--CchhhHhhheeeeccCCCCcccHHHHHHHH
Confidence            45556666666666666555555553322  555556666666666666666666665444

>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]

Probab=80.93  E-value=2.2  Score=45.96  Aligned_cols=63  Identities=17%  Similarity=0.243  Sum_probs=47.9

Q ss_pred             ccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          116 FEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++.+ +..-|....+|-.|.|    -+.++.+-   ...-+|   +..+|++.|.|.||.+++.||..++.-
T Consensus       226 T~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKS---klpi~E---LshIWeLsD~d~DGALtL~EFcAAfHL  293 (737)
T KOG1955|consen  226 TPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKS---KLPIEE---LSHIWELSDVDRDGALTLSEFCAAFHL  293 (737)
T ss_pred             CHHHHHHHHhhhhcccCCcccccccHHHHhhhhhc---cCchHH---HHHHHhhcccCccccccHHHHHhhHhh
Confidence            344555 7778999999999998    33344332   233455   899999999999999999999999865

>PRK09439 PTS system glucose-specific transporter subunit; Provisional

Probab=80.36  E-value=3.3  Score=39.04  Aligned_cols=52  Identities=21%  Similarity=0.482  Sum_probs=34.8

Q ss_pred             ceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEE
Q 008959          414 EVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFV  488 (547)
Q Consensus       414 ~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~  488 (547)
                      ..+.||++|++....++.+. .|       + ..++|+         |. ++   -|.+ +..+||++|+|..+.
T Consensus        21 ~~i~aP~~G~vi~L~~V~D~-vF-------s-~k~mGd---------Gv-AI---~P~~-~~v~AP~dG~V~~vf   72 (169)
T PRK09439         21 IEIIAPLSGEIVNIEDVPDV-VF-------A-EKIVGD---------GI-AI---KPTG-NKMVAPVDGTIGKIF   72 (169)
T ss_pred             eEEEecCCeEEEEhHHCCCh-Hh-------c-ccCccc---------eE-EE---EccC-CEEEecCCeEEEEEc
Confidence            45789999999998887642 11       1 124443         22 22   3566 789999999997654

>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]

Probab=80.15  E-value=2.4  Score=43.11  Aligned_cols=60  Identities=22%  Similarity=0.388  Sum_probs=44.5

Q ss_pred             HHHHHhhcCCCCCcccHHHHHHHHHh-c----CCcchHHHHH-----------HHHHHhcCCCCCCcCHHHHHHHH
Q 008959          159 RRILSIVDYNQDGQLSFKEFSDLISA-F----GNQVAANKKE-----------ELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       159 ~~~f~~~D~d~dG~Is~~Ef~~~l~~-l----g~~~~~eel~-----------~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      +-.|...|.|+||.++-.|+..++.. +    .....+++++           .+++..|.|.|..||.+||...-
T Consensus       247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t  322 (442)
T KOG3866|consen  247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDT  322 (442)
T ss_pred             chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhh
Confidence            45688889999999999999988864 2    2222333332           34677899999999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	547
3li6_A	66	Calcium-binding protein; calcium signaling protein	2e-11
2hps_A	186	Coelenterazine-binding protein with bound coelent;	8e-09
2hps_A	186	Coelenterazine-binding protein with bound coelent;	9e-07
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	9e-09
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	3e-05
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	1e-08
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	5e-06
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	1e-08
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	3e-07
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	3e-05
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	2e-08
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	5e-08
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	3e-08
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	3e-08
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	5e-05
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	3e-08
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	6e-08
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	7e-08
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	8e-08
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	1e-07
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	2e-04
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	1e-07
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	4e-06
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	1e-07
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	2e-07
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	4e-07
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	4e-07
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	4e-07
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	9e-06
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	6e-05
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	2e-04
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	5e-04
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	6e-07
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	2e-04
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	8e-07
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	1e-06
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	9e-07
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	1e-06
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	6e-04
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	1e-06
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	1e-06
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	2e-06
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	2e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-06
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	2e-06
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	2e-06
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	3e-06
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	4e-06
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	4e-06
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	5e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-06
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	5e-06
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	5e-06
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	7e-06
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	8e-04
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	8e-06
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	9e-06
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	9e-06
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	1e-05
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	1e-05
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	1e-05
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	2e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-05
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	2e-05
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	2e-05
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	6e-05
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	8e-04
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	2e-05
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	2e-04
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	2e-05
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	3e-05
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	8e-04
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	3e-05
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	3e-05
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	3e-05
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	3e-05
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	3e-05
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	4e-05
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	4e-05
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	7e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-04
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	9e-05
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	1e-04
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	1e-04
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	2e-04
1y1x_A	191	Leishmania major homolog of programmed cell death	2e-04
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	2e-04
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	2e-04
2jnf_A	158	Troponin C; stretch activated muscle contraction,	2e-04
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	2e-04
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	4e-04
3fwb_A	161	Cell division control protein 31; gene gating, com	5e-04
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	6e-04
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	7e-04
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	7e-04
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	7e-04
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	7e-04
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	8e-04
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	9e-04

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 14/61 (22%), Positives = 27/61 (44%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
             +   +D N DG +S++E    +S           + +FK+ D +G+G +  +E A   
Sbjct: 3   EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62

Query: 219 A 219
            
Sbjct: 63  G 63

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 54.4 bits (131), Expect = 8e-09
 Identities = 16/72 (22%), Positives = 29/72 (40%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 207
            +        +  +   +D ++DG +S  EF   + A G  +  +K    F   D N +G
Sbjct: 94  GEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNG 153

Query: 208 VVSVDELAALLA 219
            +S DE    + 
Sbjct: 154 QISRDEFLVTVN 165

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 48.2 bits (115), Expect = 9e-07
 Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 24/116 (20%)

Query: 124 EVFDLLDPSSSNKIVGKIS-------------LSCSVEDPIETEKSFARRILSIVDYNQD 170
                +D +      G IS             ++    +  E  +    R+   +     
Sbjct: 18  TRMQRVDVTGD----GFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPG 73

Query: 171 GQLSFKEFSDLISAFGNQVAANKKE-------ELFKAADKNGDGVVSVDELAALLA 219
            ++S +E +   +    ++   +K         ++   D + DG VS+ E  A L 
Sbjct: 74  VRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQ 129

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 52.9 bits (128), Expect = 9e-09
 Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 17/106 (16%)

Query: 124 EVFDLLDPSSSNKIVGKIS-------LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFK 176
            +F  +D +      G +S       +S       E      + I   +D + +G++   
Sbjct: 4   ALFKEIDVNGD----GAVSYEEVKAFVSKKRAIKNEQL---LQLIFKSIDADGNGEIDQN 56

Query: 177 EFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           EF+    +   Q  ++ K  L   +K  D +GDG ++ +E+ +   
Sbjct: 57  EFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFK 102

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 15/71 (21%), Positives = 31/71 (43%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
             +   +D N DG +S++E    +S           + +FK+ D +G+G +  +E A   
Sbjct: 3   EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62

Query: 219 ALQQEKEPLMN 229
              Q ++   +
Sbjct: 63  GSIQGQDLSDD 73

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 54.2 bits (130), Expect = 1e-08
 Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 2/74 (2%)

Query: 146 SVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNG 205
           SV D     ++    +   +D + DG +  +EF +    F   +       ++      G
Sbjct: 95  SVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGG 152

Query: 206 DGVVSVDELAALLA 219
                ++    L  
Sbjct: 153 KVTFDLNRYKELYY 166

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 46.1 bits (109), Expect = 5e-06
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 9/73 (12%)

Query: 155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK---------EELFKAADKNG 205
           +   R +    D N+D  +S++E+  +         +              LFK  D +G
Sbjct: 59  EDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSG 118

Query: 206 DGVVSVDELAALL 218
           DG+V ++E     
Sbjct: 119 DGIVDLEEFQNYC 131

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 146 SVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNG 205
             E   E    +   +  + D + D  +   E+S +  ++G  +  +  +  F      G
Sbjct: 99  KGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGG 156

Query: 206 DGVVSVDELAALLA 219
             +V+ +  A L  
Sbjct: 157 KTMVTREIFARLWT 170

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 9/81 (11%)

Query: 147 VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK---------EEL 197
             +   T K     +    D N+D Q++ +E+  + +     V   +            +
Sbjct: 55  HNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFM 114

Query: 198 FKAADKNGDGVVSVDELAALL 218
           F   D +GD ++   E + + 
Sbjct: 115 FDVNDTSGDNIIDKHEYSTVY 135

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 15/83 (18%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN---------------QVAANKKEE 196
                  R   +  D N DG + + +F   I    N                      + 
Sbjct: 9   FQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDG 68

Query: 197 LFKAADKNGDGVVSVDELAALLA 219
           L K AD+N D  V+ +E   + A
Sbjct: 69  LRKYADENEDEQVTKEEWLKMWA 91

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 207
                      + I+ + D N DGQ++  EF+  ++A G  ++  +  E F   D NG+G
Sbjct: 94  ASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNG 151

Query: 208 VVSVDELAALLA 219
            +S+DEL   + 
Sbjct: 152 ELSLDELLTAVR 163

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 51.7 bits (124), Expect = 5e-08
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 23/119 (19%)

Query: 124 EVFDLLDPSSSNKI---------------VGKISLSCSVEDPIETEKSFARRILSIVDYN 168
           + FD  D   +  +                GK + +  V+            +       
Sbjct: 11  KRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVG 70

Query: 169 QDGQLSFKEF--------SDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA 219
            DG L+ ++F         +   A  N+V     + +    DKN DG ++ DE AA L 
Sbjct: 71  SDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLT 129

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 11/98 (11%), Positives = 28/98 (28%), Gaps = 15/98 (15%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE---------------LFKAADK 203
           ++     D++ +G L   +F             +                   L K A  
Sbjct: 10  KKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGV 69

Query: 204 NGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVA 241
             DG ++ ++   +      ++   +   V G  ++  
Sbjct: 70  GSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGI 107

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.0 bits (134), Expect = 3e-08
 Identities = 89/569 (15%), Positives = 188/569 (33%), Gaps = 148/569 (26%)

Query: 15  TSRFRKKFHLHRERRRSRGNGSNSGSHHHNRVLNEEDFAGI--ALLTLISAE------MK 66
            S   + +   R+R     N +   + ++  V   + +  +  ALL L  A+      + 
Sbjct: 105 PSMMTRMYIEQRDRLY---NDNQVFAKYN--VSRLQPYLKLRQALLELRPAKNVLIDGVL 159

Query: 67  FKDK-WLACVSLGEQTCRT-AISDNTDKPI-WNSEKKLLLETNGPHVARISVFEDSDADS 123
              K W+A        C +  +    D  I W                 +++   +  ++
Sbjct: 160 GSGKTWVAL-----DVCLSYKVQCKMDFKIFW-----------------LNLKNCNSPET 197

Query: 124 EVFDL------LDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYN--------- 168
            +  L      +DP+ +++       S +++  I + ++  RR+L    Y          
Sbjct: 198 VLEMLQKLLYQIDPNWTSRS----DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

Query: 169 QDGQLSFKEFSDLISAFGNQ---VAANKKEELFKAADKNGDGVVSVDELAALLALQQEKE 225
           Q+        +   +AF      +   + +++           +S+D  +  L   + K 
Sbjct: 254 QN--------AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 226 PLMNCCPVCGETL-EVADMVNTMIHLTLCFDEGTGNQVMTGGFLTDKQASNVWMFKLSEW 284
            L+       + L       N    L++               + D          L+ W
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPR-RLSII-----------AESIRD---------GLATW 344

Query: 285 GHFSSYDV-GLNSGSRAHILVFD-RRTKRLVEEL-I---DVKI---VMSMRAIYQSKIGL 335
            ++   +   L +   + + V +    +++ + L +      I   ++S+  I+   I  
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL--IWFDVIKS 402

Query: 336 GLMDIGTKELLKSISEKQGRKMNSVESSKEIPK-FVNFFKDQINLADV-KYPLEHFKTFN 393
            +M +  K    S+ EKQ +     ES+  IP  ++       N   + +  ++H+    
Sbjct: 403 DVMVVVNKLHKYSLVEKQPK-----ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 394 EFFIRELKPGARPID------------CMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQ 441
            F   +L P    +D             +E  E        R+  F+ V    R +++ Q
Sbjct: 458 TFDSDDLIP--PYLDQYFYSHIGHHLKNIEHPE--------RMTLFRMVFLDFR-FLE-Q 505

Query: 442 KFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFV-DIPGCLYTVNPI 500
           K        N   S S LN T+   +     Y  +        E+ V  I   L  +   
Sbjct: 506 KIRHDSTAWN--ASGSILN-TLQQLKF----YKPYICDNDPKYERLVNAILDFLPKIEEN 558

Query: 501 AVNSKYCNV-----FTENKRVVSIISTAH 524
            + SKY ++       E++   +I   AH
Sbjct: 559 LICSKYTDLLRIALMAEDE---AIFEEAH 584

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 30/165 (18%), Positives = 50/165 (30%), Gaps = 18/165 (10%)

Query: 73  ACVSLGEQTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEVFDLLDPS 132
           AC S G  + +   SD   K     ++K   E     + R    E      E+F   D +
Sbjct: 3   ACGSKGSTSDKGLASDKDGKK--AKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKN 60

Query: 133 SSNKI----VGKISLSCSVEDPIETE------KSFARRILSIVDYNQDGQLSFKEFSDLI 182
            + K+    V    L     D   +       ++F +           G   F EF   +
Sbjct: 61  ETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEF---L 117

Query: 183 SAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLALQQEK 224
                        EL   F   D +G+ +V  +E    +   +  
Sbjct: 118 EFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAW 162

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 207
            +     +         VD N+D  +S  E+       G  +        F A D N DG
Sbjct: 86  PEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDG 143

Query: 208 VVSVDELAAL 217
           ++S++E    
Sbjct: 144 LLSLEEFVIA 153

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 10/59 (16%), Positives = 15/59 (25%), Gaps = 5/59 (8%)

Query: 166 DYNQDGQLSFKEFSDLISAFGNQVAANKK-----EELFKAADKNGDGVVSVDELAALLA 219
                  +    F + +        A           F+A D N D  +S DE      
Sbjct: 63  AVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFG 121

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 9/94 (9%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS 183
           + F  LD  +S    G +S+   +  P   +    +R++ I D + +G++ FKEF + +S
Sbjct: 10  KRFKKLDLDNS----GSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 65

Query: 184 AFGNQVAANKKEEL---FKAADKNGDGVVSVDEL 214
            F   V  +K+++L   F+  D + DG +S  EL
Sbjct: 66  QF--SVKGDKEQKLRFAFRIYDMDKDGYISNGEL 97

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 124 EVFDLLDPSSSNKIVGKIS---LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           E+F  L  S  +   G I       ++         FA RI  + D  ++G + F EF  
Sbjct: 41  ELFKKLSSSIIDD--GLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVR 98

Query: 181 LISAFGNQVAANKK-EELFKAADKNGDGVVSVDELAALL 218
            +  F      ++K +  FK  D    G +  +EL  ++
Sbjct: 99  SLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 51.8 bits (124), Expect = 7e-08
 Identities = 21/90 (23%), Positives = 36/90 (40%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P      FA  + ++ D N+DG++ F EF   +S         K    FK  D + DG +
Sbjct: 57  PFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYI 116

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLE 239
           + +E+  ++    +        P    T E
Sbjct: 117 TRNEMLDIVDAIYQMVGNTVELPEEENTPE 146

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 51.3 bits (123), Expect = 8e-08
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 207
           +   E  + F    L + D + DG ++  + +  ++AFG  V  +   +   A D +GDG
Sbjct: 90  DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDG 147

Query: 208 VVSVDELAALLA 219
            V   E+    A
Sbjct: 148 KVGETEIVPAFA 159

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 20/118 (16%), Positives = 35/118 (29%), Gaps = 22/118 (18%)

Query: 124 EVFDLLDPSSSNKI---------------VGKISLSCSVEDPIETEKSFARRILSIVDYN 168
             F   D   +  I                G  + S   +      ++  + +  I D +
Sbjct: 8   ARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRD 67

Query: 169 QDGQLSFKEFSDLISAFGNQVAANKKE-------ELFKAADKNGDGVVSVDELAALLA 219
            D +++ +EF                E            AD +GDG V+V + A  L 
Sbjct: 68  GDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALT 125

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 16/90 (17%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK---------------EE 196
           E E+       +  D + +G +   +FS    A   +     +               + 
Sbjct: 1   EYERRI-AARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQG 59

Query: 197 LFKAADKNGDGVVSVDELAALLALQQEKEP 226
           L   AD++GD  ++ +E       +   +P
Sbjct: 60  LAGIADRDGDQRITREEFVTGAVKRLRDKP 89

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 21/140 (15%)

Query: 124 EVFDLLDPSSSNKIVGK------ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKE 177
           E++   D   S  + GK        L  + +          +  +       DG++   E
Sbjct: 20  EIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVE 79

Query: 178 FSDLISAFGNQVAANKKEEL---------FKAADKNGDGVVSVDELAALLALQQEKEPLM 228
            + ++    N +   + ++L         ++  D +  G +  +EL   L     K+ L 
Sbjct: 80  LAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL-----KDLLE 134

Query: 229 NCCPVCGETLEVADMVNTMI 248
                  +T ++A+  + M+
Sbjct: 135 KANKTVDDT-KLAEYTDLML 153

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 47.6 bits (113), Expect = 4e-06
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE--------ELFKAADKNGDGVVS 210
             +L + D N DG+L   E + L+    N +   +          + F+  D++G+G + 
Sbjct: 150 DLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYID 209

Query: 211 VDELAALLA 219
            +EL ALL 
Sbjct: 210 ENELDALLK 218

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 15/69 (21%), Positives = 29/69 (42%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
              +   +  ++    D+N+DG + F E+   +S         K    FK  D +G+G +
Sbjct: 46  LSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCI 105

Query: 210 SVDELAALL 218
              EL  ++
Sbjct: 106 DRGELLNII 114

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 28/119 (23%)

Query: 124 EVFDLLDPSSSNKIVGKISLS-------------CSVEDPIETEKSFARRILSIVDYNQD 170
           + FD  D  S     GK+ +               + ++ +E  +   R           
Sbjct: 40  KRFDTFDLDSD----GKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95

Query: 171 GQLSFKEFSDLISAFGNQ-----------VAANKKEELFKAADKNGDGVVSVDELAALL 218
             L  +++ +    F              + A      +   D +GDG V VDEL  ++
Sbjct: 96  NGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMM 154

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 49.8 bits (119), Expect = 4e-07
 Identities = 15/69 (21%), Positives = 30/69 (43%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
             +       ++ +  D N+DG + F EF   ++    +    K +  FK  D +G+G +
Sbjct: 51  LNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSI 110

Query: 210 SVDELAALL 218
             +EL  + 
Sbjct: 111 DKNELLDMF 119

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score = 49.8 bits (119), Expect = 4e-07
 Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 2/100 (2%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P      FA  +    D N DG + F+EF   +S         K +  F   D +G+G +
Sbjct: 57  PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYI 116

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIH 249
           S  E+  ++    +    +   P    T E       +  
Sbjct: 117 SKAEMLEIVQAIYKMVSSVMKMPEDESTPE--KRTEKIFR 154

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 15/92 (16%), Positives = 38/92 (41%), Gaps = 3/92 (3%)

Query: 139 GKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELF 198
           G   L  S     E + +  R++      +  G+ SF++   +++ + + +     ++LF
Sbjct: 105 GYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLF 164

Query: 199 KAADKNGDGVVSVDELAALLALQQEKEPLMNC 230
              + +  G +S      L+A+  +   L+  
Sbjct: 165 VMVENDTKGRMSYIT---LVAVANDLAALVAD 193

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 30/151 (19%)

Query: 90  TDKPIWNSEKKLLLETNGPHVARISVFEDSDAD----SEVFDLLDPSSSNKIVGKIS--- 142
             + + +  K L  + +G +  R S    S+ D     ++F     S S    GK S   
Sbjct: 88  EKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGS----GKFSFQD 143

Query: 143 ----LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL- 197
               L+   +   E      +++  +V+ +  G++S+               AN    L 
Sbjct: 144 LKQVLAKYADTIPEGP---LKKLFVMVENDTKGRMSYITL---------VAVANDLAALV 191

Query: 198 --FKAADKNGDGVVSVDELAALLALQQEKEP 226
             F+  D N +G +S  E           + 
Sbjct: 192 ADFRKIDTNSNGTLSRKEFREHFVRLGFDKK 222

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 6/68 (8%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
             +KS    +    D ++   + F E+  L       +       L+  AD +  G +S 
Sbjct: 219 FDKKSVQDALFRYADEDESDDVGFSEYVHLG------LCLLVLRILYAFADFDKSGQLSK 272

Query: 212 DELAALLA 219
           +E+  +L 
Sbjct: 273 EEVQKVLE 280

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 166 DYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKAADKNGDGVVSVDELAALLAL 220
           D+++ GQLS +E   ++       +A KK E  F   D +    +S  E   L+ L
Sbjct: 263 DFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 166 DYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE-LAALLALQQEK 224
           D N +G LS KEF +     G    + + + LF+ AD++    V   E +   L L   +
Sbjct: 198 DTNSNGTLSRKEFREHFVRLGFDKKSVQ-DALFRYADEDESDDVGFSEYVHLGLCLLVLR 256

Query: 225 E 225
            
Sbjct: 257 I 257

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 13/63 (20%), Positives = 26/63 (41%)

Query: 156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELA 215
            +   +    D N D  + F E+   ++        +K +  FK  DK+ +G +   EL 
Sbjct: 59  QYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELL 118

Query: 216 ALL 218
            ++
Sbjct: 119 DIV 121

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 17/69 (24%), Positives = 23/69 (33%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
                        ++    G L   EF        N+ A    E +F+A D NGD  +  
Sbjct: 19  ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDF 78

Query: 212 DELAALLAL 220
            E  A L L
Sbjct: 79  LEYVAALNL 87

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 48.9 bits (117), Expect = 8e-07
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE-LAAL 217
            R    +D +    L   EF   ++  G  +   + E + +  D+NG G + ++E L AL
Sbjct: 40  ARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRAL 99

Query: 218 LALQQE 223
                +
Sbjct: 100 RPPMSQ 105

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 19/132 (14%)

Query: 124 EVFDLLDPSSSNKIVG---KISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
             F  LD   S  +     +  L+       + E   A  +    D N  G L  +EF  
Sbjct: 41  RFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAE---AEGVCRKWDRNGSGTLDLEEF-- 95

Query: 181 LISAFGNQVAANKKEELFKA---ADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGET 237
            + A    ++  ++  +  A    D++GDGVV+VD+L  + + +   +         GE 
Sbjct: 96  -LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRS------GEW 148

Query: 238 LEVADMVNTMIH 249
            E  +++   + 
Sbjct: 149 TE-DEVLRRFLD 159

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 17/61 (27%), Positives = 31/61 (50%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
           +R+    D N+DG+LS  EF ++  AF          + F+  D +G+G ++ DE  + +
Sbjct: 4   KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63

Query: 219 A 219
            
Sbjct: 64  E 64

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 18/109 (16%)

Query: 124 EVFDLLDPSSSNKIVGKISLS------CSVEDPIETEKSFARRILSIVDYNQDGQLSFKE 177
             F +LD        G I+              +         +L  +D +  G++ + E
Sbjct: 56  STFLVLDEDGK----GYITKEQLKKGLEKDGLKLPYN---FDLLLDQIDSDGSGKIDYTE 108

Query: 178 FSDLISAFGNQVAANKKE--ELFKAADKNGDGVVSVDELAALLALQQEK 224
           F   I+A  ++   +KK     F+  D + DG ++  ELA +L    +K
Sbjct: 109 F---IAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKK 154

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
           + +    +    ++D +  G ++ ++    +   G ++     + L    D +G G +  
Sbjct: 48  DYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDY 106

Query: 212 DE-LAALLALQQEKE 225
            E +AA L  +Q  +
Sbjct: 107 TEFIAAALDRKQLSK 121

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 16/70 (22%), Positives = 32/70 (45%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 207
           ++     + +   +  IVD +Q+G ++  E+     A G   ++   EE F+  D +  G
Sbjct: 101 KNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESG 160

Query: 208 VVSVDELAAL 217
            + VDE+   
Sbjct: 161 QLDVDEMTRQ 170

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 19/100 (19%), Positives = 37/100 (37%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P    K++A+ +    D N DG L FKE+   +          K E  F   D +G+G +
Sbjct: 65  PDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTI 124

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIH 249
           S +E+  ++    +     +   +  +          +  
Sbjct: 125 SKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWK 164

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 29/116 (25%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVED----PIETEKSFARRILSIVDYNQDGQLSFKEFS 179
             F  LD +    +        S  D              RI+     +   ++ F  F 
Sbjct: 33  HRFRALDRNKKGYL--------SRMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFPGFV 84

Query: 180 DLISAF--------------GNQVAANKKEEL---FKAADKNGDGVVSVDELAALL 218
            +++ F                +   +++ +L   F+  D + DG +S  E+  +L
Sbjct: 85  RVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVL 140

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 124 EVFDLLDPSSSNKIVGKIS---LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           E+F  +  +  +   G I+      ++    + E  FA R+  + D   +G L F+EF+ 
Sbjct: 52  ELFKKISSAVIDD--GLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFAR 109

Query: 181 LISAFGNQVAANKK-EELFKAADKNGDGVVSVDELAALL 218
            +S F      + K    F+  D    G +   E+  ++
Sbjct: 110 ALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMV 148

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 14/117 (11%)

Query: 124 EVFDLLDPSSSNKI--------VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSF 175
           ++F  LD +   ++           +    +    ++  +     IL  VD++++G + +
Sbjct: 359 DIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEY 418

Query: 176 KEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLALQQEKEPLMN 229
            EF   IS   ++     +E L   F   D +  G ++ +ELA L  L    E   N
Sbjct: 419 SEF---ISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWN 472

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 16/90 (17%), Positives = 33/90 (36%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P     ++A  + +  D  Q G + F++F   +S         K    F   D N DG +
Sbjct: 50  PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYI 109

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLE 239
           + +E+  ++    +         +  +T  
Sbjct: 110 NKEEMMDIVKAIYDMMGKYTYPVLKEDTPR 139

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 26/117 (22%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVE----------DPIETEKSFARRILSIVDYNQDGQL 173
            +F  LD  +S    G +S     E            I  +     ++L  +D N  GQ+
Sbjct: 61  NIFIALDVDNS----GTLSSQ---EILDGLKKIGYQKIPPD---IHQVLRDIDSNASGQI 110

Query: 174 SFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLALQQEKEPL 227
            + +F   ++A  ++    KKE     FK  D +G+G +SV+EL  +      + PL
Sbjct: 111 HYTDF---LAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPL 164

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 15/69 (21%), Positives = 29/69 (42%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P     ++A  + +  D  Q G + F++F   +S         K    F   D N DG +
Sbjct: 83  PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYI 142

Query: 210 SVDELAALL 218
           + +E+  ++
Sbjct: 143 NKEEMMDIV 151

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 2/99 (2%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P     ++A  + +  D + +G + F++F   +S         K +  F   D N DG +
Sbjct: 123 PQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCI 182

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMI 248
           + +E+ A++    +         +  +     + V    
Sbjct: 183 TKEEMLAIMKSIYDMMGRHTYPILREDAPL--EHVERFF 219

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 23/113 (20%)

Query: 124 EVFDLLDPSSSNKI--------------VGKISLSCSVEDPIETEKSFARRILSIVDYNQ 169
           ++F  LD +   ++                  ++S      IE E      IL  VD+++
Sbjct: 44  QIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE---VDHILQSVDFDR 100

Query: 170 DGQLSFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           +G + + EF   ++   ++     +E L   F+  D +G G ++ +EL  L  
Sbjct: 101 NGYIEYSEF---VTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 13/105 (12%)

Query: 124 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQ--DGQLSFKE 177
           E F+L D     KI     G + +    ++P   E     ++L     ++    ++ F+ 
Sbjct: 14  EAFELFDRVGDGKILYSQCGDV-MRALGQNPTNAE---VLKVLGNPKSDELKSRRVDFET 69

Query: 178 FSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           F  ++ A          E+    F+  DK G+G V   EL  +L 
Sbjct: 70  FLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLT 114

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 48.2 bits (115), Expect = 5e-06
 Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 14/110 (12%)

Query: 124 EVFDLLDPSSSNKI--------VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSF 175
           ++F  +D +   ++          K+S        +   +S    IL   D++++G + +
Sbjct: 350 DIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDY 409

Query: 176 KEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLALQQ 222
            EF   ++   ++ +   K++L   F+  D++G+G +SVDELA++  L  
Sbjct: 410 SEF---VTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDH 456

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score = 46.4 bits (110), Expect = 5e-06
 Identities = 21/90 (23%), Positives = 39/90 (43%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P  + + FA  + ++ D + +G + F+EF  ++S         K    F+  D N DG +
Sbjct: 57  PFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYI 116

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLE 239
           + DE+  ++A   +    M        T E
Sbjct: 117 TFDEMLTIVASVYKMMGSMVTLNEDEATPE 146

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 45.2 bits (108), Expect = 5e-06
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 165 VDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           ++     ++  ++F  +++           EE    F+  DK+  G++ V EL  +L 
Sbjct: 46  IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLT 103

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 10/103 (9%)

Query: 124 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQ-DGQLSFKEF 178
             F  L P     +      ++     +  P      F  RI  +   +     LSF++F
Sbjct: 24  RRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDF 83

Query: 179 SDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALL 218
            DL+S F +   A    +    F+  D + DG ++ ++L+ L+
Sbjct: 84  LDLLSVFSDT--ATPDIKSHYAFRIFDFDDDGTLNREDLSRLV 124

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 17/105 (16%)

Query: 123 SEVFDLLDPSSSNKIVGKISL-----SCSVEDPIETEKSFARRILSIVDYNQDGQLSFKE 177
             +  +   S +      +S        SV     T    +     I D++ DG L+ ++
Sbjct: 63  ERICRVFSTSPAK---DSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRED 119

Query: 178 FSDLISA-FGNQVAANKKEE--------LFKAADKNGDGVVSVDE 213
            S L++   G                  + + +D + DG +++ E
Sbjct: 120 LSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSE 164

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score = 46.0 bits (109), Expect = 8e-06
 Identities = 21/90 (23%), Positives = 41/90 (45%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P     +FA  + ++ D +++G + FKEF   +S        +K    F+  D + +G++
Sbjct: 57  PFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLI 116

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLE 239
           S DE+  ++    +    M   P   +T E
Sbjct: 117 SYDEMLRIVDAIYKMVGSMVKLPEDEDTPE 146

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 44.9 bits (107), Expect = 9e-06
 Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 11/105 (10%)

Query: 124 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           ++F L D      I        L     +P  T +     I +         L+  + + 
Sbjct: 8   DIFTLFDKKGQGAIAKDSLGDYLRAIGYNP--TNQLVQDIINADSSLRDASSLTLDQITG 65

Query: 181 LISAF---GNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           LI       +     K E+    F+  DK   G VSV +L  +L 
Sbjct: 66  LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLT 110

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 20/111 (18%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS 183
             F  LD   +    G +S       P         RI++      + Q++F+ F   ++
Sbjct: 33  SRFTSLDKGEN----GTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLA 88

Query: 184 AF----------------GNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
            F                     +NK    F+  D + D  +S DEL  +L
Sbjct: 89  HFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVL 139

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 8/71 (11%), Positives = 24/71 (33%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
            +     D  +   +S +EF  + +     +   + + L+     N  G +   +  +  
Sbjct: 27  TQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 86

Query: 219 ALQQEKEPLMN 229
           + +    P+  
Sbjct: 87  SSETAATPMAT 97

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 6/101 (5%)

Query: 124 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQ-DGQLSFKEF 178
             F  L P     +      ++     +  P      F  RI  +   +     LSF++F
Sbjct: 55  RRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDF 114

Query: 179 SDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
            DL+S F        K    F+  D + DG ++ ++L+ L+
Sbjct: 115 LDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLV 155

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 140 KISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK 199
           + +L     D    E +  R + +  D N+ G+L  +EF  L +     V     E +F+
Sbjct: 11  RENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQ 68

Query: 200 AADKNGDGVVSVDELAALL 218
             D + DG ++  E A   
Sbjct: 69  RLDADRDGAITFQEFARGF 87

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 7/64 (10%)

Query: 158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDEL-AA 216
           A R++ I D + +G +SF EF  +               LF    +   G +   E+  A
Sbjct: 89  ALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPA 142

Query: 217 LLAL 220
           L  L
Sbjct: 143 LQQL 146

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 17/116 (14%), Positives = 45/116 (38%), Gaps = 17/116 (14%)

Query: 124 EVFDLLDPSSSNKI-----------VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQ 172
            +F  +D +   ++           + ++    +        +    ++L  VD++++G 
Sbjct: 339 AIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGY 398

Query: 173 LSFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLALQQEKE 225
           + + EF   ++   ++     +E L   F+  D +  G +S  ELA +  +     
Sbjct: 399 IEYSEF---VTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDS 451

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 11/102 (10%)

Query: 124 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           E F L D      I  K     +    ++P E E    + +++ VD + +G + F EF  
Sbjct: 14  EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLS 70

Query: 181 LISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           L++    +   + +EEL   FK  D++G+G++S  EL  ++ 
Sbjct: 71  LMARKMKE--QDSEEELIEAFKVFDRDGNGLISAAELRHVMT 110

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 27/147 (18%)

Query: 124 EVFDLLDPSSSNKIVGK----------ISLSCSVEDPIETEKSFARRILSIVDYNQDGQL 173
           +++   D   +  I GK            L    +   E  +   +  +S  D   DG+L
Sbjct: 15  QIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRL 74

Query: 174 SFKEFSDLISAFGNQVAANKKE-----------ELFKAADKNGDGVVSVDELAALLALQQ 222
             +E +++I           +            ++++  D +  G +S  EL   L    
Sbjct: 75  QIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFL---- 130

Query: 223 EKEPLMNCCPVCGETLEVADMVNTMIH 249
            K+  +          ++ +  + M+ 
Sbjct: 131 -KDLFLQHKKKIPPN-KLDEYTDAMMK 155

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 43.9 bits (103), Expect = 6e-05
 Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 12/78 (15%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK------------EELFKAADKNGD 206
             ++ I D N+DG+L   + + +++   N +   K             E++F   D +  
Sbjct: 151 DAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRT 210

Query: 207 GVVSVDELAALLALQQEK 224
           G +   E+   +    E 
Sbjct: 211 GALEGPEVDGFVKDMMEL 228

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 40.4 bits (94), Expect = 8e-04
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 166 DYNQDGQLSFKEFSDLISAFGNQVAAN--------KKEELFKAADKNGDGVVSVDELAAL 217
           D ++ G L   E    +      V  +         +E L    D N DG +   ELA  
Sbjct: 206 DVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALC 265

Query: 218 LALQ 221
           L L+
Sbjct: 266 LGLK 269

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 124 EVFDLLDPSSSNKIVGKISLS--CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDL 181
           E+F  LD + +    G +S     +V   +  +K    RIL  +D N  G +++ EF   
Sbjct: 43  ELFYKLDTNHN----GSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEF--- 95

Query: 182 ISAFGNQVAANKKE--ELFKAADKNGDGVVSVDELAALLA 219
           ++                F   DK+ DG +S  ++ +L+ 
Sbjct: 96  MAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLVH 135

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
                +   +   +D N +G LS +E   ++++ G  +       + +A D N  G ++ 
Sbjct: 35  NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITY 92

Query: 212 DE-LAALLALQQEKE 225
            E +A     +  + 
Sbjct: 93  TEFMAGCYRWKNIES 107

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 15/69 (21%), Positives = 31/69 (44%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P     ++A  + +  D + +G +SF++F   +S         K    F   D N DG +
Sbjct: 96  PQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYI 155

Query: 210 SVDELAALL 218
           + +E+  ++
Sbjct: 156 TKEEMLDIM 164

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 11/101 (10%)

Query: 124 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           E F L D      I  K     +    ++P E E    + +++ VD + +G + F EF  
Sbjct: 15  EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLT 71

Query: 181 LISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALL 218
           +++        + +EE+   F+  DK+G+G +S  EL  ++
Sbjct: 72  MMARKMKDT--DSEEEIREAFRVFDKDGNGYISAAELRHVM 110

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 39.8 bits (94), Expect = 8e-04
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 165 VDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAA----DKNGDGVVSV 211
            D + DGQ++++EF  +++A G    A  ++E+ +       K       +
Sbjct: 129 ADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSVL 179

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 26/109 (23%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVE----------DPIETEKSFARRILSIVDYNQDGQL 173
           E+F+++D   S    G+I+     E          +  E+E      ++   D +  G +
Sbjct: 31  EMFNMIDADKS----GQITFE---ELKAGLKRVGANLKESE---ILDLMQAADVDNSGTI 80

Query: 174 SFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
            +KEF   I+A  +     +++ L   F   DK+G G ++ DEL     
Sbjct: 81  DYKEF---IAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE 126

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 16/106 (15%)

Query: 124 EVFDLLDPSSSNKI----VGKI--SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKE 177
             FD+ D      I    +G +   L    ++P + E      I+  VD +  G + F+E
Sbjct: 24  AAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEE---LDAIIEEVDEDGSGTIDFEE 77

Query: 178 FSDLISAF-GNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           F  ++            +EEL   F+  DKN DG + ++EL  +L 
Sbjct: 78  FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR 123

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 43.2 bits (103), Expect = 3e-05
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 11/102 (10%)

Query: 124 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           E F L D  +S  I        +      P E E      +++ +D + +  + F EF  
Sbjct: 15  EAFALFDKDNSGSISASELATVMRSLGLSPSEAE---VADLMNEIDVDGNHAIEFSEFLA 71

Query: 181 LISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           L+S        + ++EL   FK  DKNGDG++S  EL  +L 
Sbjct: 72  LMSRQLKCN--DSEQELLEAFKVFDKNGDGLISAAELKHVLT 111

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 45.3 bits (107), Expect = 3e-05
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 11/101 (10%)

Query: 124 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           E F L D      I  K     +    ++P E E    + +++ VD + +G + F EF  
Sbjct: 316 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLT 372

Query: 181 LISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALL 218
           +++        + +EE+   F+  DK+G+G +S  EL  ++
Sbjct: 373 MMARKMKD--TDSEEEIREAFRVFDKDGNGYISAAELRHVM 411

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 13/105 (12%)

Query: 124 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQ--DGQLSFKE 177
           E F L D +   KI    VG I      ++P   E     +IL      +     ++F+E
Sbjct: 12  EAFLLFDRTGDAKITASQVGDI-ARALGQNPTNAE---INKILGNPSKEEMNAAAITFEE 67

Query: 178 FSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
           F  ++ A  N       E+     +  DK G+G V   EL  +LA
Sbjct: 68  FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLA 112

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 19/107 (17%)

Query: 124 EVFDLLDPSSSNKIVGKISLS-CSV------EDPIETEKSFARRILSI--VDYNQDGQLS 174
           +VF+L D        G +              +P   +      + ++       +  L 
Sbjct: 13  DVFELFDFWDGRD--GAVDAFKLGDVCRCLGINPRNED------VFAVGGTHKMGEKSLP 64

Query: 175 FKEFSDLISAFGNQVAANKKE--ELFKAADKNGDGVVSVDELAALLA 219
           F+EF        +       +  E FK  D+ G G +S  EL  +L 
Sbjct: 65  FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT 111

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 42.1 bits (100), Expect = 7e-05
 Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 11/97 (11%)

Query: 124 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           E FDL D   +  I  K   +++     +P + E    ++++S +D    G+++F +F  
Sbjct: 10  EAFDLFDADGTGTIDVKELKVAMRALGFEPKKEE---IKKMISEIDKEGTGKMNFGDFLT 66

Query: 181 LISAFGNQVAANKKEEL---FKAADKNGDGVVSVDEL 214
           +++   ++   + KEE+   FK  D +  G +S   L
Sbjct: 67  VMTQKMSEK--DTKEEILKAFKLFDDDETGKISFKNL 101

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 44.3 bits (105), Expect = 8e-05
 Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 20/117 (17%)

Query: 124 EVFDLLDPSSSNKI--------------VGKISLSCSVEDPIETEKSFARRILSIVDYNQ 169
           E+F  LD ++   +              +  +  +  +++   T +     ++ ++D + 
Sbjct: 335 EIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDG 394

Query: 170 DGQLSFKEFSDLISAFGNQVAANKK---EELFKAADKNGDGVVSVDELAALLALQQE 223
            G + + EF   I++  ++     +   E  FK  DK+G G +S  EL  L +    
Sbjct: 395 SGSIEYSEF---IASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADS 448

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 5/121 (4%)

Query: 102 LLETNGPHVARISVFEDSDADSEVFDLLDPSSSNKIVGKIS----LSCSVEDPIETEKSF 157
            +   G     +   E S  + ++  L+     +   G I     ++ +++  I   +  
Sbjct: 360 FMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGS-GSIEYSEFIASAIDRTILLSRER 418

Query: 158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAAL 217
             R   + D +  G++S KE   L S   + +   + E + +  D N DG V  +E   +
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478

Query: 218 L 218
           L
Sbjct: 479 L 479

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 41.7 bits (99), Expect = 9e-05
 Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 11/101 (10%)

Query: 124 EVFDLLDPSSSNKIVG---KISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           E F+L D   +  I     +  L                 + +  D   +G++ F EF  
Sbjct: 10  EAFELFDSERTGFITKEGLQTVLKQFGVRVEPAA---FNEMFNEADATGNGKIQFPEFLS 66

Query: 181 LISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALL 218
           ++     Q     ++ L   F+  D  G G +    L   L
Sbjct: 67  MMGRRMKQ--TTSEDILRQAFRTFDPEGTGYIPKAALQDAL 105

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624

 Score = 44.1 bits (103), Expect = 1e-04
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAAL- 217
              L   D N+D +++FKE  D +     QV      ++F+  D +    +  +E+    
Sbjct: 14  HSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFY 73

Query: 218 --LALQQEKEPLMNCCPVCGETLEVADMVN 245
             L  + E +          ETL V  +V 
Sbjct: 74  KMLTQRAEIDRAFEEAAGSAETLSVERLVT 103

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 26/109 (23%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVE----------DPIETEKSFARRILSIVDYNQDGQL 173
           E+F ++D  +S    G I+     E          + +E+E    + ++   D ++ G +
Sbjct: 14  ELFKMIDTDNS----GTITFD---ELKDGLKRVGSELMESE---IKDLMDAADIDKSGTI 63

Query: 174 SFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDELAALLA 219
            + EF   I+A  +     ++E L   F   DK+G G +++DE+     
Sbjct: 64  DYGEF---IAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACK 109

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 32/135 (23%)

Query: 124 EVFDLLDPSSSNKI----VGKI--SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKE 177
           E F   D      I    +G    ++      P E E      +   ++ N  G + F +
Sbjct: 15  EAFREFDKDKDGYINCRDLGNCMRTMG---YMPTEME---LIELSQQINMNLGGHVDFDD 68

Query: 178 FSDLISAF--GNQVAANKKEEL---FKAADKNGDGVVSVDELAALLALQQEKEPLMNCCP 232
           F +L+              +EL   F+  D NGDG +S  EL   +     +  L     
Sbjct: 69  FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAM-----RALL----- 118

Query: 233 VCGETL---EVADMV 244
             G  +   ++ +++
Sbjct: 119 --GHQVGHRDIEEII 131

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 21/105 (20%)

Query: 124 EVFDLLDPSSSNKIVGKIS-------LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFK 176
           E F  +D   S    G IS       LS +             ++L + D N  G+++F 
Sbjct: 31  EWFRAVDTDGS----GAISVPELNAALSSAGVPFSLAT---TEKLLHMYDKNHSGEITFD 83

Query: 177 EFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDEL-AALLAL 220
           EF DL              E F+  D +GDG +  +E+ AALL+ 
Sbjct: 84  EFKDLHHF------ILSMREGFRKRDSSGDGRLDSNEVRAALLSS 122

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 15/90 (16%)

Query: 144 SCSVEDPIETEKSFARRILS------------IVDYNQDGQLSFKEFSDLISAFGNQVAA 191
            C   D  E +K F    LS             +D +Q G L   E    +  F +    
Sbjct: 17  ECQDPDTFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE 76

Query: 192 NKKEE---LFKAADKNGDGVVSVDELAALL 218
             + E   L  AAD +GDG +  DE   ++
Sbjct: 77  LTESETKSLMDAADNDGDGKIGADEFQEMV 106

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 165 VDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAA----DKNGDGVVSVDELAALLA 219
           VD +  G + F EF  ++       +  K EE         DKN DG + ++EL  +L 
Sbjct: 64  VDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQ 122

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQ--VAANKKEEL---FKAADKNGDGVVSVDE 213
           R+++   D   +G + F  F  + + F  +       ++EL   F+  DK G+G +S D 
Sbjct: 53  RQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDV 112

Query: 214 LAALLA 219
           +  +LA
Sbjct: 113 MREILA 118

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 146 SVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE---LFKAAD 202
             +   + +K F      I+D ++ G +   E   ++  F +       +E   L  A D
Sbjct: 36  KKKSADDVKKVF-----HILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGD 90

Query: 203 KNGDGVVSVDELAALLA 219
           K+GDG + V+E + L+A
Sbjct: 91  KDGDGKIGVEEFSTLVA 107

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDEL-AAL 217
           R I+S+ D      ++F EF+ +             + +F+  D++  G++  +EL  AL
Sbjct: 47  RSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQAL 100

Query: 218 LAL 220
              
Sbjct: 101 SGF 103

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 8/59 (13%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDEL 214
             ++   D      + + +F  ++     +   +  +E+   F+  D +  G +S+  L
Sbjct: 62  LDLIDEYDSEGRHLMKYDDFYIVMGEKILKR--DPLDEIKRAFQLFDDDHTGKISIKNL 118

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 143 LSCSVEDPIETEKSFA--RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA 200
           L+ S  +   +  S    R +++++D +  G++ F  F +L +      A N  +E F  
Sbjct: 25  LTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA------ALNAWKENFMT 78

Query: 201 ADKNGDGVVSVDELAALLA 219
            D++G G V   EL   + 
Sbjct: 79  VDQDGSGTVEHHELRQAIG 97

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 25/104 (24%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVE----------DPIETEKSFARRILSIVDYNQDGQL 173
           E FDL D   S    G I      E          +P + E    ++++S +D +  G +
Sbjct: 32  EAFDLFDTDGS----GTIDAK---ELKVAMRALGFEPKKEE---IKKMISEIDKDGSGTI 81

Query: 174 SFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDEL 214
            F+EF  +++A   +   + +EE+   F+  D +  G +++ +L
Sbjct: 82  DFEEFLTMMTAKMGER--DSREEILKAFRLFDDDNSGTITIKDL 123

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 40.1 bits (94), Expect = 7e-04
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 7/63 (11%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDEL-AAL 217
           R ++S++D +  G + F EF +L +        N   + F + D +  G V   EL  AL
Sbjct: 76  RLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKAL 129

Query: 218 LAL 220
             +
Sbjct: 130 TTM 132

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 4/101 (3%)

Query: 121 ADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 180
           + S++   L    +                 ++     + I  I+D +Q G +   E   
Sbjct: 7   SPSDIAAALRDCQAPDSFSPKKFFQISGMSKKSSSQL-KEIFRILDNDQSGFIEEDELKY 65

Query: 181 LISAFGNQVAANKKEE---LFKAADKNGDGVVSVDELAALL 218
            +  F +        E      AAD +GDG +  +E   ++
Sbjct: 66  FLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMV 106

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 39.0 bits (92), Expect = 7e-04
 Identities = 23/104 (22%), Positives = 37/104 (35%), Gaps = 17/104 (16%)

Query: 124 EVFDLLDPSSSNKI----VGKI--SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKE 177
           E F + D  +  K+    +G    SL    ++P   E      I   ++  +        
Sbjct: 9   ECFQIFDKDNDGKVSIEELGSALRSLG---KNPTNAE---LNTIKGQLNAKEFD---LAT 59

Query: 178 FSDLISAFGNQVAANKKE--ELFKAADKNGDGVVSVDELAALLA 219
           F  +            KE  + F+A DK G+G +   EL  LL 
Sbjct: 60  FKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLL 103

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 37.5 bits (88), Expect = 8e-04
 Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
           E E    + +  ++D +  G ++F E  D +   G+++  ++ ++L  AAD +  G +  
Sbjct: 19  EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78

Query: 212 DE-LAALL 218
            E +AA +
Sbjct: 79  GEFIAATV 86

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103

 Score = 38.0 bits (88), Expect = 9e-04
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 16/82 (19%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV----------------AA 191
            D ++  +   +    + D N DG L  +E   L +    +V                  
Sbjct: 12  LDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL 71

Query: 192 NKKEELFKAADKNGDGVVSVDE 213
             +E + K  D N D +V+++E
Sbjct: 72  RMREHVMKNVDTNQDRLVTLEE 93

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	547
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.48
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.46
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.46
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.46
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.42
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.41
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.4
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.39
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.39
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.39
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.38
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.38
3fwb_A	161	Cell division control protein 31; gene gating, com	99.35
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.34
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.33
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.33
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.32
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.32
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.32
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.32
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.32
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.31
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.31
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.3
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.3
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.29
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.28
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.28
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.28
3fwb_A	161	Cell division control protein 31; gene gating, com	99.28
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.27
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.27
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.27
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.27
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.27
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.26
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.26
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.26
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.26
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.26
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.26
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.26
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.25
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.25
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.25
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.25
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.24
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.24
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.24
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.24
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.23
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.23
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.23
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.23
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.23
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.23
1y1x_A	191	Leishmania major homolog of programmed cell death	99.22
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.22
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.22
1y1x_A	191	Leishmania major homolog of programmed cell death	99.22
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.22
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.21
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.21
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.21
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.2
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.2
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.2
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.2
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.19
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.19
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.19
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.19
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.19
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.19
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.19
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.18
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.18
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.17
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.17
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.17
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.17
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.17
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.17
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.16
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.16
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.16
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.15
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.15
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.15
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.15
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.15
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.14
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.14
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.14
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.14
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.14
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.13
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.13
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.13
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.13
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.13
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.13
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.12
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.12
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.12
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.12
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.12
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.12
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.12
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.11
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.11
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.11
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.1
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.1
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.1
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.09
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.09
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.09
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.09
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.09
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.09
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.09
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.08
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.08
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.08
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.08
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.08
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.07
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.07
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.07
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.07
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.07
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.07
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.06
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.05
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.05
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.04
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.04
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.04
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.04
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.04
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.04
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.04
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.04
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.04
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.04
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.03
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.03
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.03
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.02
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.02
3li6_A	66	Calcium-binding protein; calcium signaling protein	99.01
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.0
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.0
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.0
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.0
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	98.99
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	98.99
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	98.99
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	98.99
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	98.99
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.99
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.98
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	98.98
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	98.97
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	98.97
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	98.97
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	98.96
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	98.96
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	98.96
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	98.95
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	98.95
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	98.95
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	98.94
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	98.93
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	98.93
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	98.92
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	98.92
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	98.91
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	98.91
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	98.91
1c07_A	95	Protein (epidermal growth factor receptor pathway	98.9
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	98.9
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	98.9
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	98.9
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	98.89
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	98.88
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.87
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	98.86
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	98.86
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	98.86
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	98.85
2hps_A	186	Coelenterazine-binding protein with bound coelent;	98.85
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	98.85
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	98.85
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.85
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	98.82
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.82
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	98.82
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	98.82
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	98.81
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	98.81
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	98.81
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	98.8
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	98.79
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	98.79
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	98.78
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	98.78
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	98.78
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	98.77
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	98.77
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	98.76
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	98.75
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	98.75
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	98.74
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	98.7
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	98.7
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	98.69
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	98.69
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	98.69
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	98.68
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	98.68
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	98.67
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	98.66
2jq6_A	139	EH domain-containing protein 1; metal binding prot	98.66
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	98.65
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	98.65
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	98.65
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	98.64
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	98.64
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	98.61
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	98.61
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	98.59
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	98.58
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	98.58
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	98.58
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	98.58
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	98.57
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	98.53
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	98.52
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	98.5
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	98.48
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	98.46
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.45
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	98.44
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	98.42
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	98.4
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	98.4
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	98.39
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	98.38
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	98.35
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	98.3
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	98.27
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	98.24
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	98.22
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	98.2
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	98.19
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	98.19
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	98.17
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	98.15
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	98.14
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.13
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	98.13
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	98.13
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	98.13
3li6_A	66	Calcium-binding protein; calcium signaling protein	98.12
2fk9_A	157	Protein kinase C, ETA type; ATP-binding, metal-bin	98.12
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	98.11
2ep6_A	133	MCTP2 protein; beta sandwich, Ca2+ binding, membra	98.11
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	98.1
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	98.09
1c07_A	95	Protein (epidermal growth factor receptor pathway	98.09
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	98.08
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	98.07
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	98.07
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	98.07
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	98.06
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	98.05
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	98.04
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.04
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	98.03
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	98.0
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	97.98
1wfj_A	136	Putative elicitor-responsive gene; C2 domain, rike	97.98
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	97.98
2dmh_A	140	Myoferlin; beta-sandwich, FER-1-like protein 3, mu	97.97
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	97.96
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	97.94
1wfm_A	138	Synaptotagmin XIII; C2 domain, exocytosis, neurotr	97.94
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	97.93
3kwu_A	148	MUNC13-1; calcium binding protein, phospholipid bi	97.92
1rlw_A	126	Phospholipase A2, CALB domain; hydrolase, C2 domai	97.92
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	97.92
2nq3_A	173	Itchy homolog E3 ubiquitin protein ligase; C2 doma	97.92
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	97.9
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	97.89
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	97.89
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	97.88
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	97.87
2jq6_A	139	EH domain-containing protein 1; metal binding prot	97.84
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	97.84
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	97.8
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	97.79
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	97.78
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	97.72
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	97.71
3m7f_B	176	E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1	97.7
2bwq_A	129	Regulating synaptic membrane exocytosis protein 2;	97.69
2b3r_A	134	Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA	97.68
2d8k_A	141	Synaptotagmin VII; exocytosis, calcium binding, ly	97.67
2enp_A	147	B/K protein; C2 type 1,beta sandwich, structural g	97.65
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	97.64
3b7y_A	153	E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-	97.63
1gmi_A	136	Protein kinase C, epsilon type; PKC, C2 domain, X-	97.62
3pyc_A	132	E3 ubiquitin-protein ligase smurf1; phospholipid b	97.61
2chd_A	142	Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium	97.61
1ugk_A	138	Synaptotagmin IV, KIAA1342; beta sandwich, structu	97.6
1v27_A	141	Regulating synaptic membrane exocytosis protein 2;	97.6
3nsj_A	540	Perforin-1; pore forming protein, immune system; H	97.59
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	97.56
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	97.56
1rsy_A	152	Synaptotagmin I; calcium/phospholipid binding prot	97.55
3rdl_A	137	Protein kinase C alpha type; protein kinase PKC, t	97.55
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	97.54
2z0u_A	155	WW domain-containing protein 1; C2 domain, alterna	97.53
1a25_A	149	CALB, protein kinase C (beta); calcium++/phospholi	97.53
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	97.49
3f04_A	143	Synaptotagmin-1; C2A, calcium, cell junction, cyto	97.48
2cjs_A	167	UNC-13 homolog A, MUNC13-1; neurotransmitter trans	97.47
2cm5_A	166	Rabphilin-3A; protein transport, zinc-finger, Ca2+	97.46
2dmg_A	142	KIAA1228 protein; beta-sandwich, structural genomi	97.42
2cjt_A	131	UNC-13 homolog A, MUNC13-1; phorbol-ester binding,	97.39
1tjx_A	159	Similar to synaptotagmini/P65; C2B domain, calcium	97.37
3fdw_A	148	Synaptotagmin-like protein 4; structural genomics,	97.35
3fbk_A	153	RGS3, RGP3, regulator of G-protein signaling 3; al	97.35
2q3x_A	171	Regulating synaptic membrane exocytosis protein 1;	97.34
3jzy_A	510	Intersectin 2; C2 domain, structural genomics cons	97.32
1w15_A	153	Synaptotagmin IV; metal binding protein, endocytos	97.32
3n5a_A	138	Synaptotagmin-7; calcium/phospholipid binding prot	97.31
1rh8_A	142	Piccolo protein; beta-sandwich, metal binding prot	97.3
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	97.21
1dqv_A	296	Synaptotagmin III; beta sandwich, calcium ION, C2	97.2
1nub_A	229	Basement membrane protein BM-40; extracellular mod	97.17
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	97.07
2r83_A	284	Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel	96.97
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	96.84
3l9b_A	144	Otoferlin; C2-domain, beta-sheets, cell membrane,	96.61
3bxj_A	483	RAS GTPase-activating protein syngap; GTPase activ	96.56
1sra_A	151	Sparc; extracellular matrix protein, calcium-bindi	96.56
1cjy_A	749	CPLA2, protein (cytosolic phospholipase A2); lipid	96.5
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	96.42
1ax3_A	162	Iiaglc, glucose permease IIA domain; phosphotransf	96.34
1dqv_A	296	Synaptotagmin III; beta sandwich, calcium ION, C2	96.32
2gpr_A	154	Glucose-permease IIA component; phosphotransferase	96.23
2r83_A	284	Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel	96.13
1f3z_A	161	EIIA-GLC, glucose-specific phosphocarrier; phospho	95.57
1nub_A	229	Basement membrane protein BM-40; extracellular mod	95.31
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	94.02
2qpt_A	550	EH domain-containing protein-2; protein-nucleotide	92.26
4fl4_A	88	Glycoside hydrolase family 9; structural genomics,	88.43
1pul_A	125	Hypothetical protein C32E8.3 in chromosome I; alph	86.18
4dh2_B	82	Dockerin type 1; cellulosome, cohesin, type I cohe	86.0
1tuz_A	118	Diacylglycerol kinase alpha; transferase, HR532, n	85.48
2l5y_A	150	Stromal interaction molecule 2; EF-hand, SAM domai	85.33

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.48  E-value=1.7e-13  Score=123.01  Aligned_cols=117  Identities=20%  Similarity=0.292  Sum_probs=96.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..+++.+|.|++|.|+++||..++... ....+.++++.
T Consensus         8 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   83 (143)
T 2obh_A            8 IREAFDLFDADGTGTIDVKELKVAMRALGF-EPKKEE---IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILK   83 (143)
T ss_dssp             HHHHHHTTCTTCCSEEEGGGHHHHHHHTTC-CCCHHH---HHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHH
Confidence            8899999999999999    7777777776 667776   8899999999999999999999988652 22334578999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|+|+.+||.+++..++.....    ..+.+++...|.+++
T Consensus        84 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~D~d~d  129 (143)
T 2obh_A           84 AFKLFDDDETGKISFKNLKRVAKELGENLTD----EELQEMIDEADRDGD  129 (143)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHTTCCCCH----HHHHHHHHHHCTTSS
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCCC
Confidence            9999999999999999999999988765443    457778877776544

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.46  E-value=2.8e-13  Score=122.51  Aligned_cols=124  Identities=26%  Similarity=0.396  Sum_probs=100.8

Q ss_pred             cccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCc
Q 008959          115 VFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQ  188 (547)
Q Consensus       115 l~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~  188 (547)
                      +++.+.+ ++++|..+|.|++|.|    +..++..++. .++..+   +..++..+|.+++|.|++.||...+.. ....
T Consensus         4 lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   79 (148)
T 2lmt_A            4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQ-NPTEAE---LQDLIAEAENNNNGQLNFTEFCGIMAKQMRET   79 (148)
T ss_dssp             CCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTC-CCCHHH---HHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTT
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCC-CchHHH---HHHHHHhcccCCCCcccHHHHHHHHHHHhccc
Confidence            3344444 8999999999999999    7777777775 677776   888999999999999999999998876 4455


Q ss_pred             chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          189 VAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       189 ~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .+.++++.+|+.+|.|++|+|+.+||.+++..++.....    ..+.+++...|.+++
T Consensus        80 ~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~----~e~~~l~~~~D~d~d  133 (148)
T 2lmt_A           80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTD----EEIDEMIREADFDGD  133 (148)
T ss_dssp             TTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCH----HHHHHHHHHHCCSCC
T ss_pred             CcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccH----HHHHHHHHHhCCCCC
Confidence            677889999999999999999999999999988876544    457778887776554

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.46  E-value=2.7e-13  Score=126.98  Aligned_cols=121  Identities=28%  Similarity=0.389  Sum_probs=100.2

Q ss_pred             ecccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CC
Q 008959          114 SVFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GN  187 (547)
Q Consensus       114 sl~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~  187 (547)
                      .+++.+.+ ++++|..||.|++|.|    +..++..++. .+++.+   +..++..+|.+++|.|++.||..++... ..
T Consensus         4 ~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~-~~~~~~---~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~   79 (176)
T 2lhi_A            4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAE---VNDLMNEIDVDGNHQIEFSEFLALMSRQLKS   79 (176)
T ss_dssp             CCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTC-CCCHHH---HHHHHTTTCSSCSSSBCTTHHHHHHTSSCCS
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCC-ChhHHH---HHHHHHHhCcCCCccchHHHHHHHHHHhccc
Confidence            45556665 9999999999999999    7777888876 677777   8999999999999999999999988663 33


Q ss_pred             cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          188 QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       188 ~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                      ..+++++.++|+.||.|++|+|+.+||.+++..++....+    ..+.+++...|
T Consensus        80 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~----~ei~~l~~~~d  130 (176)
T 2lhi_A           80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD----AEVDDMLREVS  130 (176)
T ss_dssp             SHHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCH----HHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccch----HHHHHHHHhhc
Confidence            4467789999999999999999999999999988876554    35777777666

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.46  E-value=1e-13  Score=126.85  Aligned_cols=105  Identities=15%  Similarity=0.249  Sum_probs=69.2

Q ss_pred             ecccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHH------------------------------HHHH
Q 008959          114 SVFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETE------------------------------KSFA  158 (547)
Q Consensus       114 sl~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e------------------------------~~~l  158 (547)
                      .|++.+.+ ++++|+.||.|++|.|    +..++..++. .++..+                              .+.+
T Consensus         9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~-~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l   87 (153)
T 3i5g_B            9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGR-VPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDAL   87 (153)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTS-CCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCC-CccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHH
Confidence            34555555 9999999999999999    6667777665 443333                              1235


Q ss_pred             HHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       159 ~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.+|+.||.|++|+|+.+||..+|..+|..++++++.++|+.+|.| ||.|+|+||+++|+.
T Consensus        88 ~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~  148 (153)
T 3i5g_B           88 RNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK  148 (153)
T ss_dssp             HHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred             HHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence            5666666666666666666666666666666666666666666655 666666666666643

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.42  E-value=6e-13  Score=139.25  Aligned_cols=117  Identities=26%  Similarity=0.401  Sum_probs=98.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      ++++|+.+|.|++|.|    +..++..++. .+++.+   ++.+|+.+|.|++|.|+++||..++... ....+++++++
T Consensus       304 LREaF~~fDkDgdG~IS~eELk~aLrsLG~-~~TeeE---I~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLre  379 (440)
T 3u0k_A          304 FKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAE---LQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIRE  379 (440)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHH
T ss_pred             HHHHHHHHcCCCCCEECHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHH
Confidence            8999999999999999    7778888876 677777   8999999999999999999999998763 44456688999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|+|+.+||.+++..++....+    ..+.++++..|.+++
T Consensus       380 AFk~fDkDgdG~IS~eELr~vL~~lGe~LSd----eEIdeLfke~D~DgD  425 (440)
T 3u0k_A          380 AFRVFDKDGNGYISAAELRHVMTNLGEKLTD----EEVDEMIREADIDGD  425 (440)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHHTCCCCH----HHHHHHHHHHCTTCS
T ss_pred             HHHHHCCCCcCcCCHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCCC
Confidence            9999999999999999999999999876554    457788887776554

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.41  E-value=8.8e-13  Score=118.56  Aligned_cols=117  Identities=27%  Similarity=0.410  Sum_probs=95.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++... ....+.+++..
T Consensus        12 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   87 (148)
T 1exr_A           12 FKEAFALFDKDGDGTITTKELGTVMRSLGQ-NPTEAE---LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIE   87 (148)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHTC-CCCHHH---HHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHH
Confidence            8899999999999999    6667777765 566666   8899999999999999999999988653 23345678999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|+|+.+||.+++...+...+.    ..+.+++...|.+++
T Consensus        88 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~d~d~d  133 (148)
T 1exr_A           88 AFKVFDRDGNGLISAAELRHVMTNLGEKLTD----DEVDEMIREADIDGD  133 (148)
T ss_dssp             HHHHHSTTCSSCBCHHHHHHHHHHTTCCCCH----HHHHHHHHHHCSSSS
T ss_pred             HHHHhCCCCCCcCCHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCCC
Confidence            9999999999999999999999988765443    457777877765443

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.40  E-value=6.3e-13  Score=122.42  Aligned_cols=118  Identities=22%  Similarity=0.360  Sum_probs=86.9

Q ss_pred             ccChHH-HHHHHHhhCC--CCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-
Q 008959          116 FEDSDA-DSEVFDLLDP--SSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-  187 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~--d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-  187 (547)
                      ++.+.+ ++++|..||.  |++|.|    ++.++++++. .+++.+   +..++. .|.+++|.|+++||..++..... 
T Consensus         4 t~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~-~~t~~e---l~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~   78 (159)
T 3i5g_C            4 TKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGM-NPTEAQ---VHQHGG-TKKMGEKAYKLEEILPIYEEMSSK   78 (159)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTC-CCCHHH---HHTTTC-CSSTTSCEECHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCC-CCCHHH---HHHHHc-ccccCCCcccHHHHHHHHHHhhcc
Confidence            333444 8889999985  788888    7777888876 677766   565544 47778888888888888766432 


Q ss_pred             --cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          188 --QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       188 --~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                        ....+++.++|+.||.|++|+|+.+||+++|..+|.....    ..+.+++...|
T Consensus        79 ~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~----~e~~~l~~~~D  131 (159)
T 3i5g_C           79 DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITE----DQCNDIFTFCD  131 (159)
T ss_dssp             CTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCH----HHHHHHHHHTT
T ss_pred             cccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCH----HHHHHHHHHhC
Confidence              3456778888888888888888888888888888776554    45677776655

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.39  E-value=1.1e-12  Score=118.54  Aligned_cols=114  Identities=18%  Similarity=0.301  Sum_probs=91.9

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhc---CCCCCChHHHHHHHHHHHhhcC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSC---SVEDPIETEKSFARRILSIVDY  167 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l---~~~~~~~~e~~~l~~~f~~~D~  167 (547)
                      ....++.|.++..|+            +.++..++..+|.+++|.+ +.+++..+   .......++   ++.+|+.+|.
T Consensus        18 ~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~---l~~aF~~~D~   94 (148)
T 2lmt_A           18 QFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEE---MREAFKIFDR   94 (148)
T ss_dssp             HHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHH---HHHHHHHHHS
T ss_pred             HHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHH---HHHHHHHHCC
Confidence            344666777776655            2337889999999999999 44443322   222233344   8999999999


Q ss_pred             CCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          168 NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       168 d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      |++|.|+.+||..++..+|..++.+++.++|+.+|.|+||.|+++||+++|.+
T Consensus        95 d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~  147 (148)
T 2lmt_A           95 DGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ  147 (148)
T ss_dssp             SCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred             CCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999853

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.39  E-value=1.1e-12  Score=122.83  Aligned_cols=130  Identities=16%  Similarity=0.232  Sum_probs=100.1

Q ss_pred             CCCCCchhhHHHHH-hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHH
Q 008959           90 TDKPIWNSEKKLLL-ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEK  155 (547)
Q Consensus        90 tLnP~Wne~~kll~-e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~  155 (547)
                      +|.+.--+.++..| ....++.+.++..|+            +.++..++..+|.|++|.+ +.+++..+..........
T Consensus         4 ~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~   83 (176)
T 2lhi_A            4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE   83 (176)
T ss_dssp             CCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcH
Confidence            44554444444444 344566777776554            3338889999999999999 665554443322222233


Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.++.+|+.||.|++|+|+.+||..++..++..+++++++++|+.+| |+||.|+|+||+++|..
T Consensus        84 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k  147 (176)
T 2lhi_A           84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK  147 (176)
T ss_dssp             HHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence            44999999999999999999999999999999999999999999999 99999999999999965

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.39  E-value=1.1e-12  Score=117.49  Aligned_cols=115  Identities=19%  Similarity=0.344  Sum_probs=90.0

Q ss_pred             cCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCC
Q 008959          105 TNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDG  171 (547)
Q Consensus       105 ~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG  171 (547)
                      ...++.+.++..|+            +.++..+|..+|.|++|.| +.+++..+............++.+|+.+|.|++|
T Consensus        15 ~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G   94 (143)
T 2obh_A           15 FDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETG   94 (143)
T ss_dssp             TCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSS
T ss_pred             hCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHhCCCCCC
Confidence            34455666665443            3338889999999999999 6655443321001111223489999999999999


Q ss_pred             cccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          172 QLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       172 ~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      .|+.+||..++..+|..++++++.++|+.+|.|+||.|+++||.+++.
T Consensus        95 ~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~  142 (143)
T 2obh_A           95 KISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK  142 (143)
T ss_dssp             SBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred             cCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            999999999999999999999999999999999999999999999873

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.38  E-value=2.5e-12  Score=114.15  Aligned_cols=116  Identities=16%  Similarity=0.271  Sum_probs=96.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~  196 (547)
                      ++.+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++.. +......+.++.
T Consensus         8 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~---~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   83 (142)
T 2bl0_C            8 FKEAFELFDSERTGFITKEGLQTVLKQFGV-RVEPAA---FNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQ   83 (142)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHTC-CCCHHH---HHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHH
Confidence            8999999999999999    6666666665 566666   899999999999999999999999986 455567788999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|.|+.+||.+++..++.....    ..+.+++...| .++
T Consensus        84 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~----~~~~~~~~~~d-~~d  128 (142)
T 2bl0_C           84 AFRTFDPEGTGYIPKAALQDALLNLGDRLKP----HEFAEFLGITE-TEK  128 (142)
T ss_dssp             HHHHTCCSSCSCEEHHHHHHHHHHSSSCCCH----HHHHHHHHHHC-CSS
T ss_pred             HHHHHCCCCCCcCcHHHHHHHHHHcCCCCCH----HHHHHHHHHhC-CCC
Confidence            9999999999999999999999988765433    35677777766 443

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.38  E-value=2.1e-12  Score=118.18  Aligned_cols=126  Identities=21%  Similarity=0.367  Sum_probs=98.5

Q ss_pred             eecccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cC
Q 008959          113 ISVFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FG  186 (547)
Q Consensus       113 isl~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg  186 (547)
                      ..+.+.+.+ ++++|..+|.|++|.|    +..++..++. .++..+   +..+|..+|.|++|.|+++||..++.. ..
T Consensus        20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~   95 (169)
T 3qrx_A           20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF-EPKKEE---IKKMISEIDKDGSGTIDFEEFLTMMTAKMG   95 (169)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSC-CCCHHH---HHHHHHHHCSSSSSSEEHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhcCCCCCcCCHHHHHHHHHHHhc
Confidence            344444444 8999999999999999    6666776765 566666   899999999999999999999999875 33


Q ss_pred             CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          187 NQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       187 ~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .....+.+..+|+.+|.|++|.|+.+||.+++...+.....    ..+.+++...|.+++
T Consensus        96 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~----~~~~~~~~~~D~~~d  151 (169)
T 3qrx_A           96 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTE----EELQEMIAEADRNDD  151 (169)
T ss_dssp             HHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCH----HHHHHHHHHHCCSSS
T ss_pred             ccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCH----HHHHHHHHHhCCCCC
Confidence            33356789999999999999999999999999988765443    356677776665443

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.35  E-value=5e-12  Score=114.37  Aligned_cols=116  Identities=13%  Similarity=0.139  Sum_probs=95.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~  196 (547)
                      +.++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.+++|.|+++||..++.. .......+.+..
T Consensus        25 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~  100 (161)
T 3fwb_A           25 IYEAFSLFDMNNDGFLDYHELKVAMKALGF-ELPKRE---ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKR  100 (161)
T ss_dssp             HHHHHHHHCTTSSSEECHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHH
Confidence            8999999999999999    6666777665 566666   899999999999999999999999876 334456778999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccC
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      +|+.+|.|++|.|+.+||.+++..++.....    ..+..++...|..+
T Consensus       101 ~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~----~~~~~~~~~~d~~~  145 (161)
T 3fwb_A          101 AFQLFDDDHTGKISIKNLRRVAKELGETLTD----EELRAMIEEFDLDG  145 (161)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHTTCCCCH----HHHHHHHHTTCSSS
T ss_pred             HHHHHcCCCCCeEeHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCC
Confidence            9999999999999999999999988765443    45777777666543

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.34  E-value=1.5e-12  Score=116.30  Aligned_cols=102  Identities=10%  Similarity=0.135  Sum_probs=68.2

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC-CcchHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG-NQVAANKKEELFK  199 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-~~~~~eel~~~F~  199 (547)
                      .+++|..+|.|++|.| +.+++..+............++.+|+.+|.|++|.|+.+||..++..+| ..++.++++++|+
T Consensus         5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~   84 (135)
T 3h4s_E            5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR   84 (135)
T ss_dssp             --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence            4678999999999999 6666554433222233345599999999999999999999999999999 5999999999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          200 AADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      .+|.|+||.|+++||.+++.....
T Consensus        85 ~~D~d~dG~I~~~EF~~~~~~~~~  108 (135)
T 3h4s_E           85 EGDLDGDGALNQTEFCVLMVRLSP  108 (135)
T ss_dssp             HHCSSCSSSBCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCcHHHHHHHHHHhCH
Confidence            999999999999999999987643

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.33  E-value=6e-12  Score=111.90  Aligned_cols=113  Identities=29%  Similarity=0.387  Sum_probs=93.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      +..+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.+++|.|+++||..++... ......+.+..
T Consensus        13 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~   88 (147)
T 4ds7_A           13 FKEAFALFDKDNSGSISASELATVMRSLGL-SPSEAE---VADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLE   88 (147)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCcCHHHHHHHHHHhCC-CCCHHH---HHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHH
Confidence            8999999999999999    6666666665 566666   8999999999999999999999998763 33455678999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                      +|+.+|.|++|.|+.+||.+++...+.....    ..+.+++...|
T Consensus        89 ~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~----~~~~~~~~~~d  130 (147)
T 4ds7_A           89 AFKVFDKNGDGLISAAELKHVLTSIGEKLTD----AEVDEMLREVS  130 (147)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHTTCCCCH----HHHHHHHHHHS
T ss_pred             HHHHhCCCCCCeECHHHHHHHHHHcCCCCCH----HHHHHHHHHhc
Confidence            9999999999999999999999988765443    34666666666

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.33  E-value=4.8e-12  Score=107.98  Aligned_cols=96  Identities=14%  Similarity=0.344  Sum_probs=83.1

Q ss_pred             hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKK  194 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel  194 (547)
                      +.++..+|+.+|  ++|.| +.+++..+.......++   ++.+|+.+|.|++|.|+.+||..++..+   +..++.+++
T Consensus         9 ~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~~~~~~~---l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~   83 (109)
T 3fs7_A            9 AKDIESALSSCQ--AADSFNYKSFFSTVGLSSKTPDQ---IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAET   83 (109)
T ss_dssp             HHHHHHHHHHTC--STTCCCHHHHHHHHTCTTCCHHH---HHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHH
T ss_pred             HHHHHHHHHhcC--CCCcCcHHHHHHHHhcCCCcHHH---HHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHH
Confidence            445899999999  79999 77777665543334444   9999999999999999999999999998   788999999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          195 EELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +.+|+.+|.|+||.|+++||.++++
T Consensus        84 ~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           84 KAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             HHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            9999999999999999999999874

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.32  E-value=7.4e-12  Score=115.73  Aligned_cols=123  Identities=26%  Similarity=0.393  Sum_probs=94.9

Q ss_pred             ccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcc
Q 008959          116 FEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQV  189 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~  189 (547)
                      .+.+.. ++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++... ....
T Consensus         6 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~   81 (179)
T 2f2o_A            6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTD   81 (179)
T ss_dssp             CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence            344444 8999999999999999    6666666665 566666   8899999999999999999999988763 2234


Q ss_pred             hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          190 AANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       190 ~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ..+.+..+|+.+|.|++|.|+.+||.+++...+.....    ..+..++...|.+++
T Consensus        82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~----~~~~~~~~~~D~~~d  134 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD----EEVDEMIREADIDGD  134 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCH----HHHHHHHHHHCTTCS
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCH----HHHHHHHHHcCCCCC
Confidence            55679999999999999999999999999888765433    346667766665443

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.32  E-value=5.4e-12  Score=114.06  Aligned_cols=117  Identities=20%  Similarity=0.314  Sum_probs=95.4

Q ss_pred             HHHHHHhhC-CCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-c----chH
Q 008959          122 DSEVFDLLD-PSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-Q----VAA  191 (547)
Q Consensus       122 l~~~F~~~D-~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~----~~~  191 (547)
                      ++++|..+| .|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++..... .    ...
T Consensus        15 l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   90 (158)
T 2jnf_A           15 LETAFRDFETPEGSGRVSTDQIGIILEVLGI-QQTKST---IRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ   90 (158)
T ss_dssp             HHHHHHHSBCSSSCSSEEHHHHHHHHHHTTC-SCSHHH---HHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTS
T ss_pred             HHHHHHHhCCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHH
Confidence            899999999 9999999    6666776665 566666   899999999999999999999999977432 2    456


Q ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          192 NKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       192 eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.++.+|+.+|.|++|+|+.+||.+++..++.....    ..+..++...|.+++
T Consensus        91 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~D~d~d  141 (158)
T 2jnf_A           91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSS----EDLDAMIDEIDADGS  141 (158)
T ss_dssp             STHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCH----HHHHHHHHHHCSSCC
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCH----HHHHHHHHHhCCCCC
Confidence            689999999999999999999999999988765443    356777777665443

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.32  E-value=3.8e-12  Score=133.23  Aligned_cols=133  Identities=15%  Similarity=0.228  Sum_probs=99.7

Q ss_pred             cCCCCCCCchhhHHHHH-hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCCh
Q 008959           87 SDNTDKPIWNSEKKLLL-ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIE  152 (547)
Q Consensus        87 i~~tLnP~Wne~~kll~-e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~  152 (547)
                      +.+.+.+.--+.++..| ..+.++.+.++..|+            +.++.++|+.+|.|++|.| +.+++..+.......
T Consensus       292 s~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~  371 (440)
T 3u0k_A          292 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDT  371 (440)
T ss_dssp             BCBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC----
T ss_pred             hHhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC
Confidence            34444544433444444 455666777776554            3348899999999999999 666654432211111


Q ss_pred             HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          153 TEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       153 ~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      ...+.++++|+.+|.|++|.|+.+||..++..+|..+++++++++|+.+|.|+||.|+++||+++|.
T Consensus       372 d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt  438 (440)
T 3u0k_A          372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT  438 (440)
T ss_dssp             --CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred             ChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence            1122389999999999999999999999999999999999999999999999999999999999884

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.32  E-value=8.8e-12  Score=106.31  Aligned_cols=97  Identities=18%  Similarity=0.384  Sum_probs=84.0

Q ss_pred             hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKK  194 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel  194 (547)
                      +.++..+|+.+|.  +|.| +.+++..+.......++   ++.+|+.+|.|++|.|+.+||..++..+   |..++.+++
T Consensus         8 ~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~~~~~~~---l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~   82 (109)
T 5pal_A            8 ADDINKAISAFKD--PGTFDYKRFFHLVGLKGKTDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTET   82 (109)
T ss_dssp             HHHHHHHHHHTCS--TTCCCHHHHHHHHTCTTCCHHH---HHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHH
T ss_pred             HHHHHHHHHHhCC--CCcCcHHHHHHHHhhccCcHHH---HHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHH
Confidence            4458999999998  8888 77777666543333444   9999999999999999999999999998   888999999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          195 EELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.+|+.+|.|++|.|+++||.+++..
T Consensus        83 ~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           83 KALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             HHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            99999999999999999999999864

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.32  E-value=2.4e-12  Score=115.06  Aligned_cols=116  Identities=20%  Similarity=0.294  Sum_probs=86.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhh-cCCCCCcccHHHHHHHHHhc------CCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIV-DYNQDGQLSFKEFSDLISAF------GNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~-D~d~dG~Is~~Ef~~~l~~l------g~~~~  190 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+ |.|++|.|+++||..++...      .....
T Consensus         6 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   81 (148)
T 1m45_A            6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGY-NPTNQL---VQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAK   81 (148)
T ss_dssp             CTTCHHHHCTTCCSEEEGGGHHHHHHHTTC-CCCHHH---HHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCC
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHhCC-CCCHHH---HHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccccc
Confidence            5667889999999988    6666776765 566666   88889999 99999999999999988775      44456


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccC
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      .+.++.+|+.+|.|++|.|+.+||.+++..++.....    ..+..++...|.++
T Consensus        82 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~d~d~  132 (148)
T 1m45_A           82 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTD----AEVDELLKGVEVDS  132 (148)
T ss_dssp             THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCH----HHHHHHHTTCCCCT
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCH----HHHHHHHHHhCCCC
Confidence            6788999999999999999999999999887665433    34666676666443

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.31  E-value=3e-12  Score=117.15  Aligned_cols=132  Identities=13%  Similarity=0.183  Sum_probs=99.3

Q ss_pred             CCCCCCchhhHHHHH-hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHH
Q 008959           89 NTDKPIWNSEKKLLL-ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETE  154 (547)
Q Consensus        89 ~tLnP~Wne~~kll~-e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e  154 (547)
                      .++.+..-+..+.++ ....++.+.++..|.            +.++..+|..+|.|++|.| +.+++..+.........
T Consensus        20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   99 (169)
T 3qrx_A           20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS   99 (169)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence            445555555444444 444556677765443            2338899999999999999 55554433210111122


Q ss_pred             HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ...+..+|+.+|.|++|.|+.+||..++..+|..++++++..+|+.+|.|+||.|+++||.+++..
T Consensus       100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A          100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            344889999999999999999999999999999999999999999999999999999999999855

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.31  E-value=4.8e-12  Score=113.70  Aligned_cols=99  Identities=14%  Similarity=0.319  Sum_probs=81.7

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK  199 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~  199 (547)
                      ++..+|..+|.|++|.| +.+++..+............+..+|+.+|.|++|.|+.+||..++..+|..++++++.++|+
T Consensus        47 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  126 (148)
T 1exr_A           47 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIR  126 (148)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            37889999999999999 55554333210001122234889999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHH
Q 008959          200 AADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      .+|.|+||.|+++||.++|.
T Consensus       127 ~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1exr_A          127 EADIDGDGHINYEEFVRMMV  146 (148)
T ss_dssp             HHCSSSSSSBCHHHHHHHHH
T ss_pred             HhCCCCCCcEeHHHHHHHHc
Confidence            99999999999999999884

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.30  E-value=5.8e-12  Score=114.10  Aligned_cols=117  Identities=23%  Similarity=0.340  Sum_probs=92.9

Q ss_pred             HHHHHHhhCCCC-Cchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC----CcchHH
Q 008959          122 DSEVFDLLDPSS-SNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG----NQVAAN  192 (547)
Q Consensus       122 l~~~F~~~D~d~-dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg----~~~~~e  192 (547)
                      ++++|..+|.|+ +|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++....    .....+
T Consensus        20 l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   95 (161)
T 1dtl_A           20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQ-NPTPEE---LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEE   95 (161)
T ss_dssp             HHHHHHHHTTTCGGGSBCHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHH
T ss_pred             HHHHHHHHcCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHH
Confidence            899999999999 9999    6666776665 566666   89999999999999999999999987743    345677


Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          193 KKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .++.+|+.+|.|++|.|+.+||.+++..++.....    ..+..++...|.+++
T Consensus        96 ~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~----~~~~~~~~~~D~d~d  145 (161)
T 1dtl_A           96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITE----DDIEELMKDGDKNND  145 (161)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCH----HHHHHHHHHHCTTSS
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCCC
Confidence            89999999999999999999999999887654333    346667776665443

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.30  E-value=8.5e-12  Score=111.49  Aligned_cols=116  Identities=21%  Similarity=0.285  Sum_probs=92.4

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcc-----hHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV-----AAN  192 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~-----~~e  192 (547)
                      +.++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.+++|.|+++||..++.......     ..+
T Consensus        13 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~---~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   88 (153)
T 3ox6_A           13 LREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEME---LIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVK   88 (153)
T ss_dssp             HHHHHHHHHHHCSSSCCHHHHHHHHHHTTC-CCCHHH---HHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHH
Confidence            8899999999999999    6666777765 566666   88999999999999999999999987632211     256


Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHh-hhccCcccccchhHHHHHhhhcccC
Q 008959          193 KKEELFKAADKNGDGVVSVDELAALLAL-QQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~l~~-l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      .+..+|+.+|.|++|.|+.+||.+++.. .+.....    ..+.+++...|..+
T Consensus        89 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~----~~~~~~~~~~d~~~  138 (153)
T 3ox6_A           89 ELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH----RDIEEIIRDVDLNG  138 (153)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCH----HHHHHHHHHHCSSS
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCH----HHHHHHHHHhCCCC
Confidence            7999999999999999999999999988 6655433    34666776666543

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.29  E-value=1.5e-11  Score=112.83  Aligned_cols=118  Identities=19%  Similarity=0.210  Sum_probs=90.9

Q ss_pred             HHHHHHhhCCCCCchh----HHH----HhhhcCCCCCChHHHH--------HHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPSSSNKI----VGK----ISLSCSVEDPIETEKS--------FARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~----ll~~l~~~~~~~~e~~--------~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++++|..+|.|++|.|    +..    ++..++. .++..+..        .|+.+|+.+|.|++|.|+++||..++...
T Consensus         9 l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~-~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~~~   87 (176)
T 1nya_A            9 LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGK-DAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENL   87 (176)
T ss_dssp             HHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSS-CSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCC-CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            8999999999999999    554    4555665 55555522        23489999999999999999999999875


Q ss_pred             CCcch--------HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          186 GNQVA--------ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       186 g~~~~--------~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .....        .+.++.+|+.+|.|++|.|+.+||.+++...+  .+.    ..+..++...|.+++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~----~~~~~~~~~~D~d~d  150 (176)
T 1nya_A           88 IFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSK----AEAAEAFNQVDTNGN  150 (176)
T ss_dssp             HSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCH----HHHHHHHHHHCTTCS
T ss_pred             hcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCH----HHHHHHHHHhCCCCC
Confidence            33332        36699999999999999999999999998876  222    346677776665443

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.28  E-value=1.3e-11  Score=105.20  Aligned_cols=97  Identities=16%  Similarity=0.324  Sum_probs=81.5

Q ss_pred             ChHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHH
Q 008959          118 DSDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANK  193 (547)
Q Consensus       118 ~~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~ee  193 (547)
                      .+.++..+|..+|  ++|.| +.+++..+........   .++.+|+.+|.|++|.|+.+||..++..+   |..++.++
T Consensus         8 ~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~~~~~~---~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~   82 (109)
T 1bu3_A            8 ADADVAAALKACE--AADSFNYKAFFAKVGLTAKSAD---DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAE   82 (109)
T ss_dssp             CHHHHHHHHHHTC--STTCCCHHHHHHHHTGGGSCHH---HHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHH
T ss_pred             CHHHHHHHHHHhC--CCCcCcHHHHHHHHHcChhhHH---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHH
Confidence            3455889999999  88888 7766655533222233   39999999999999999999999999998   78899999


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      ++.+|+.+|.|+||.|+++||.+++.
T Consensus        83 ~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           83 TKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            99999999999999999999999873

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.28  E-value=2.5e-11  Score=108.03  Aligned_cols=114  Identities=28%  Similarity=0.337  Sum_probs=92.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhh---cCCCCCcccHHHHHHHHHhc---CCcchH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIV---DYNQDGQLSFKEFSDLISAF---GNQVAA  191 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~---D~d~dG~Is~~Ef~~~l~~l---g~~~~~  191 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+   |.++ |.|+++||..++...   ......
T Consensus        10 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~---~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~   84 (149)
T 2mys_C           10 FKEAFLLFDRTGDAKITASQVGDIARALGQ-NPTNAE---INKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTF   84 (149)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchH
Confidence            8899999999999999    6666666665 566666   88899999   9999 999999999999774   334566


Q ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccC
Q 008959          192 NKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       192 eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      +.+..+|+.+|.|++|.|+.+||..++..++.....    ..+..++.. |..+
T Consensus        85 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~----~~~~~~~~~-d~~~  133 (149)
T 2mys_C           85 EDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTE----EEVEELMKG-QEDS  133 (149)
T ss_pred             HHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCH----HHHHHHHhh-CCCC
Confidence            789999999999999999999999999988765433    346666766 5443

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.28  E-value=1.4e-11  Score=111.45  Aligned_cols=116  Identities=22%  Similarity=0.371  Sum_probs=91.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-cc---hHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-QV---AANK  193 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~---~~ee  193 (547)
                      +.++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++..... ..   ..+.
T Consensus        22 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~   97 (162)
T 1top_A           22 FKAAFDMFDADGGGDISTKELGTVMRMLGQ-NPTKEE---LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEE   97 (162)
T ss_dssp             HHHHHHTTTCSCSSEEEGGGHHHHHHHTTC-CCCHHH---HHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCC-CCCHHH---HHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHH
Confidence            8899999999999998    6666776665 566666   889999999999999999999998876321 12   4567


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccC
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      ++.+|+.+|.|++|.|+.+||.+++..++.....    ..+..++...|.++
T Consensus        98 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~----~~~~~~~~~~d~~~  145 (162)
T 1top_A           98 LANCFRIFDKNADGFIDIEELGEILRATGEHVTE----EDIEDLMKDSDKNN  145 (162)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCH----HHHHHHHHHHCTTC
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCC
Confidence            8999999999999999999999999888754433    34666666666543

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.28  E-value=8.9e-12  Score=112.68  Aligned_cols=131  Identities=12%  Similarity=0.157  Sum_probs=100.2

Q ss_pred             cCCCCCCCchhhHHHHH-hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcC---CCC
Q 008959           87 SDNTDKPIWNSEKKLLL-ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCS---VED  149 (547)
Q Consensus        87 i~~tLnP~Wne~~kll~-e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~---~~~  149 (547)
                      ....++|..-+..+.++ ....++.+.++..+.            +.++..+|..+|.+++|.| +.+++..+.   ...
T Consensus        13 ~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~   92 (161)
T 3fwb_A           13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR   92 (161)
T ss_dssp             TTTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC
Confidence            44556665555555555 334556666665443            2338889999999999999 555443322   111


Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ...   ..++.+|+.+|.|++|.|+.+||..++..+|..++++++..+|+.+|.|++|.|+++||.+++..
T Consensus        93 ~~~---~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  160 (161)
T 3fwb_A           93 DPL---DEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD  160 (161)
T ss_dssp             CHH---HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             CcH---HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            222   33899999999999999999999999999999999999999999999999999999999999864

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.27  E-value=8.2e-12  Score=108.84  Aligned_cols=113  Identities=17%  Similarity=0.235  Sum_probs=88.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH---hcCCcchHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS---AFGNQVAANKK  194 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~---~lg~~~~~eel  194 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++.   ......+.+++
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~---~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~   77 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQL---LQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGL   77 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCC-SSHHHH---HHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCC-CCCHHH---HHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHH
Confidence            5789999999999999    5555555553 444444   89999999999999999999999986   33444566779


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.+|+.+|.|++|.|+.+||.+++...+...        +.+++...|.+++
T Consensus        78 ~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~--------~~~~~~~~D~~~d  121 (134)
T 1jfj_A           78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK--------VAEQVMKADANGD  121 (134)
T ss_dssp             HHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH--------HHHHHHHHHCSSS
T ss_pred             HHHHHHHCCCCCCccCHHHHHHHHHHhCHHH--------HHHHHHHhCCCCC
Confidence            9999999999999999999999997665321        5556665554433

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.27  E-value=1.3e-11  Score=105.15  Aligned_cols=96  Identities=15%  Similarity=0.321  Sum_probs=81.0

Q ss_pred             hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKK  194 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel  194 (547)
                      +.++..+|..+|  ++|.| +.+++..+........   .++.+|+.+|.|++|.|+.+||..++..+   |..++++++
T Consensus         8 ~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~~~~~~---~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~   82 (108)
T 2pvb_A            8 DADVAAALAACS--AADSFKHKEFFAKVGLASKSLD---DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAET   82 (108)
T ss_dssp             HHHHHHHHHHTC--STTCCCHHHHHHHHTGGGSCHH---HHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHH
T ss_pred             HHHHHHHHHHhC--CCCcCcHHHHHHHHhCChhHHH---HHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHH
Confidence            445889999999  78888 6666655533222233   39999999999999999999999999998   778999999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          195 EELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +.+|+.+|.|++|.|+++||.+++.
T Consensus        83 ~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           83 KAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             HHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            9999999999999999999999874

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.27  E-value=1.4e-11  Score=104.95  Aligned_cols=97  Identities=19%  Similarity=0.393  Sum_probs=81.9

Q ss_pred             hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKK  194 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel  194 (547)
                      +.++..+|..+|  ++|.| +.+++..+........   .++.+|+.+|.|++|.|+.+||..++..+   |..++.+++
T Consensus         8 ~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~~~~~~---~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~   82 (109)
T 1rwy_A            8 AEDIKKAIGAFT--AADSFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKET   82 (109)
T ss_dssp             HHHHHHHHHTTC--STTCCCHHHHHHHHTGGGSCHH---HHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHH
T ss_pred             HHHHHHHHHHcC--CCCcEeHHHHHHHHhcCcchHH---HHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHH
Confidence            455889999999  88888 7766655533222233   39999999999999999999999999998   778999999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          195 EELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.+|+.+|.|++|.|+++||.+++..
T Consensus        83 ~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           83 KTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            99999999999999999999998854

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.27  E-value=1.4e-11  Score=105.04  Aligned_cols=98  Identities=19%  Similarity=0.377  Sum_probs=82.5

Q ss_pred             ChHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHH
Q 008959          118 DSDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANK  193 (547)
Q Consensus       118 ~~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~ee  193 (547)
                      .+.++..+|..+|  ++|.| +.+++..+........   .++.+|+.+|.|++|.|+.+||..++..+   |..++.++
T Consensus         8 t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~~~~~~~---~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~   82 (110)
T 1pva_A            8 KADDIKKALDAVK--AEGSFNHKKFFALVGLKAMSAN---DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAE   82 (110)
T ss_dssp             CHHHHHHHHHHTC--STTCCCHHHHHHHHTCTTSCHH---HHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHH
T ss_pred             CHHHHHHHHHhcC--CCCcCcHHHHHHHHccCcchHH---HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHH
Confidence            3455889999998  78888 7776665543222333   39999999999999999999999999998   77889999


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.+|.|++|.|+++||.+++..
T Consensus        83 ~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           83 TKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            999999999999999999999998853

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.27  E-value=7.3e-12  Score=111.27  Aligned_cols=110  Identities=17%  Similarity=0.275  Sum_probs=63.8

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~  196 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..++..    ++|.|+++||..++.. .......+++..
T Consensus         9 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   80 (143)
T 3j04_B            9 FKEAFNMIDQNRDGFIDKEDLHDMLASMGK-NPTDEY---LEGMMSE----APGPINFTMFLTMFGEKLNGTDPEDVIRN   80 (143)
T ss_dssp             HHHHHTTTCSSCTTCCCHHHHHHHHHHTSC-CCCHHH---HHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred             HHHHHHHhCCCCCCCcCHHHHHHHHHHhCC-CCCHHH---HHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHHHHHH
Confidence            7888888888888888    5556666654 444444   3333332    5566666666666554 233334455666


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~  243 (547)
                      +|+.+|.|++|+|+.+||.+++..++.....    ..+..++...|.
T Consensus        81 ~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~----~~~~~~~~~~D~  123 (143)
T 3j04_B           81 AFACFDEEASGFIHEDHLRELLTTMGDRFTD----EEVDEMYREAPI  123 (143)
T ss_dssp             HHTTSCSSSCCCCCTTTHHHHHHTSSSCCCH----HHHHHHHHHTTC
T ss_pred             HHHHHCCCCCCeEcHHHHHHHHHHcCCCCCH----HHHHHHHHHcCC
Confidence            6666666666666666666666655543332    334555554443

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.26  E-value=5.2e-12  Score=113.28  Aligned_cols=119  Identities=24%  Similarity=0.303  Sum_probs=91.1

Q ss_pred             ccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCC--CCCcccHHHHHHHHHhcCC-
Q 008959          116 FEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYN--QDGQLSFKEFSDLISAFGN-  187 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d--~dG~Is~~Ef~~~l~~lg~-  187 (547)
                      ++.+.+ ++.+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.+  ++|.|+++||..++..... 
T Consensus         5 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~   80 (151)
T 1w7j_B            5 NKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQ-NPTNAE---VLKVLGNPKSDELKSRRVDFETFLPMLQAVAKN   80 (151)
T ss_dssp             ------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTC-CCCHHH---HHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-
T ss_pred             CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhcc
Confidence            344444 8999999999999999    7777777765 566666   89999999999  9999999999999987542 


Q ss_pred             --cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          188 --QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       188 --~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                        ....+++..+|+.+|.|++|+|+.+||.+++..++.....    ..+..++...|
T Consensus        81 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~d  133 (151)
T 1w7j_B           81 RGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTE----EEVETVLAGHE  133 (151)
T ss_dssp             -------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCH----HHHHHHHTTCC
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCH----HHHHHHHHhcc
Confidence              2234568889999999999999999999999988765433    35677776666

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.26  E-value=2.3e-11  Score=109.22  Aligned_cols=94  Identities=27%  Similarity=0.388  Sum_probs=53.0

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-cchHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-QVAANKKEELFK  199 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~~~eel~~~F~  199 (547)
                      ++++|..+|.|++|.| ..++ ..+..... ..+   +..+|+.+|.|++|.|+++||..++..... ....+.++.+|+
T Consensus         8 l~~~F~~~D~d~~G~i~~~el-~~l~~~~~-~~~---~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~   82 (155)
T 3ll8_B            8 LGKRFKKLDLDNSGSLSVEEF-MSLPELQQ-NPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFR   82 (155)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHH-TTSGGGTT-CTT---HHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHH
T ss_pred             HHHHHHHhCcCCCCeEcHHHH-HHhhcccc-chH---HHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence            5666666666666666 3333 11111011 112   556666666666666666666666655432 244456666666


Q ss_pred             HhcCCCCCCcCHHHHHHHHHh
Q 008959          200 AADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+|.|++|.|+.+||.+++..
T Consensus        83 ~~D~d~~G~i~~~e~~~~l~~  103 (155)
T 3ll8_B           83 IYDMDKDGYISNGELFQVLKM  103 (155)
T ss_dssp             HHCTTCSSCBCHHHHHHHHHH
T ss_pred             HhCCCCCCcCcHHHHHHHHHH
Confidence            666666666666666666666

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.26  E-value=6.6e-12  Score=111.59  Aligned_cols=128  Identities=17%  Similarity=0.244  Sum_probs=94.1

Q ss_pred             CCCCchhhHHHHH-hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHH
Q 008959           91 DKPIWNSEKKLLL-ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKS  156 (547)
Q Consensus        91 LnP~Wne~~kll~-e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~  156 (547)
                      ++|..-+..+.++ ....++.+.++..+.            +.++..+|..+|.+++|.| +.+++..+...........
T Consensus         5 l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~   84 (147)
T 4ds7_A            5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQ   84 (147)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHH
Confidence            3444444333333 334455666665443            2337889999999999999 5554433321011122234


Q ss_pred             HHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          157 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       157 ~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      .++.+|+.+|.|++|.|+.+||..++..+|..++++++..+|+.+| |++|.|+++||.+++.
T Consensus        85 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~  146 (147)
T 4ds7_A           85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS  146 (147)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence            4899999999999999999999999999999999999999999999 9999999999999874

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.26  E-value=1.6e-11  Score=111.16  Aligned_cols=118  Identities=21%  Similarity=0.297  Sum_probs=91.3

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChH---HHHHHHHHHHhhcC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIET---EKSFARRILSIVDY  167 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~---e~~~l~~~f~~~D~  167 (547)
                      ....++.+.++..+.            +.++..+|..+|.|++|.| +.+++..+........   ....++.+|+.+|.
T Consensus        28 ~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~  107 (162)
T 1top_A           28 MFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDK  107 (162)
T ss_dssp             TTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCC
Confidence            334455666665443            2337889999999999999 5554433321000011   23458999999999


Q ss_pred             CCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          168 NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       168 d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      |++|.|+.+||..++..+|..++.+++..+|+.+|.|+||.|+++||.+++..+
T Consensus       108 d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  161 (162)
T 1top_A          108 NADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             TCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             CCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999999998653

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.26  E-value=3e-11  Score=114.55  Aligned_cols=97  Identities=15%  Similarity=0.180  Sum_probs=86.1

Q ss_pred             HHHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHH
Q 008959          121 ADSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE  195 (547)
Q Consensus       121 el~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~  195 (547)
                      +++++|..+|.| ++|.|    +..++..++. ..+..+   ++.+|+.+|.|++|.|+++||..++..++...+.++++
T Consensus        23 el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~   98 (204)
T 1jba_A           23 QLQEWYKKFLEECPSGTLFMHEFKRFFKVPDN-EEATQY---VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK   98 (204)
T ss_dssp             HHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSS-STTHHH---HHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred             HHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcC-CCcHHH---HHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHH
Confidence            389999999999 89999    6666776665 444555   89999999999999999999999999888778888999


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          196 ELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+|+.+|.|++|.|+++||.+++...
T Consensus        99 ~~F~~~D~d~~G~I~~~E~~~~l~~~  124 (204)
T 1jba_A           99 WTFKIYDKDRNGCIDRQELLDIVESI  124 (204)
T ss_dssp             HHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            99999999999999999999999887

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.26  E-value=6.8e-12  Score=118.23  Aligned_cols=120  Identities=18%  Similarity=0.253  Sum_probs=95.7

Q ss_pred             cChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchH
Q 008959          117 EDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAA  191 (547)
Q Consensus       117 e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~  191 (547)
                      +.+.+ ++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++..+......
T Consensus         6 ~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~-~~~~~~---~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~   81 (188)
T 1s6i_A            6 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS-ELMESE---IKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE   81 (188)
T ss_dssp             CTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTC-CCCHHH---HHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCC-CCCHHH---HHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHH
Confidence            33344 8999999999999999    5566666654 566666   8999999999999999999999998776554556


Q ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          192 NKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       192 eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.++.+|+.+|.|++|+|+.+||.+++..++.  .+    ..+.+++...|.+++
T Consensus        82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~--~~----~~~~~~~~~~D~d~d  130 (188)
T 1s6i_A           82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGL--DD----IHIDDMIKEIDQDND  130 (188)
T ss_dssp             CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC--CT----THHHHHHHHHCSSSS
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC--CH----HHHHHHHHHHCCCCC
Confidence            77999999999999999999999999987662  11    347777777775544

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.26  E-value=6.6e-12  Score=116.08  Aligned_cols=103  Identities=16%  Similarity=0.320  Sum_probs=81.3

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK  199 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~  199 (547)
                      ++..+|..+|.|++|.| +.+++..+............++.+|+.+|.|++|.|+.+||..++..+|..++.+++..+|+
T Consensus        48 ~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~  127 (179)
T 2f2o_A           48 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR  127 (179)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            38889999999999999 55554333210011122344899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          200 AADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      .+|.|+||.|+++||.+++...+.
T Consensus       128 ~~D~~~dg~i~~~eF~~~~~~~~~  151 (179)
T 2f2o_A          128 EADIDGDGQVNYEEFVQMMTAKGG  151 (179)
T ss_dssp             HHCTTCSSSEEHHHHHHHSCC---
T ss_pred             HcCCCCCCcCcHHHHHHHHHHcCC
Confidence            999999999999999999976544

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.25  E-value=1e-11  Score=112.12  Aligned_cols=115  Identities=20%  Similarity=0.270  Sum_probs=89.8

Q ss_pred             HHHHHHhhCC--CCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC--cchHHH
Q 008959          122 DSEVFDLLDP--SSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN--QVAANK  193 (547)
Q Consensus       122 l~~~F~~~D~--d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~--~~~~ee  193 (547)
                      ++++|..+|.  |++|.|    +..++..++. .++..+   +..+ +.+|.|++|.|+++||..++.....  ....++
T Consensus        11 l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   85 (156)
T 1wdc_C           11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGI-NPRNED---VFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFAD   85 (156)
T ss_dssp             HHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTC-CCCHHH---HHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHH
T ss_pred             HHHHHHHHccCCCCCCCCcHHHHHHHHHHcCC-CCCHHH---HHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHH
Confidence            8889999999  999998    6666776765 566666   7777 8889999999999999998877533  456678


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhh--hcccC
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEV--ADMVN  245 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~--~D~~~  245 (547)
                      ++.+|+.+|.|++|+|+.+||.+++..++.....    ..+..++..  .|.++
T Consensus        86 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~~~D~d~  135 (156)
T 1wdc_C           86 YMEAFKTFDREGQGFISGAELRHVLTALGERLSD----EDVDEIIKLTDLQEDL  135 (156)
T ss_dssp             HHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCH----HHHHHHHHHHTCCCCT
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCH----HHHHHHHHHhCCCCCC
Confidence            9999999999999999999999999887764433    346666666  55443

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.25  E-value=2.1e-11  Score=113.22  Aligned_cols=124  Identities=15%  Similarity=0.121  Sum_probs=94.5

Q ss_pred             HHHHHHHHhhCC-CCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHH
Q 008959          120 DADSEVFDLLDP-SSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK  194 (547)
Q Consensus       120 ~el~~~F~~~D~-d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel  194 (547)
                      .++.++|+.||. |++|.|    +..++..++...++..+   ++.+|+.+|.|++|.|+++||..++..++...+.+++
T Consensus        18 ~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~---~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~   94 (183)
T 1s6c_A           18 RELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTY---AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKL   94 (183)
T ss_dssp             HHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHH---HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHHHHH
Confidence            347777777777 899999    66666666653355555   8999999999999999999999999887767788899


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhh----hcc----CcccccchhHHHHHhhhcccCc
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQ----QEK----EPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l----~~~----~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.+|+.+|.|++|+|+++||..++..+    |..    ..+......+.+++...|.+++
T Consensus        95 ~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d  154 (183)
T 1s6c_A           95 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD  154 (183)
T ss_dssp             HHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999886    322    1111111346677777765544

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.25  E-value=2.6e-11  Score=117.40  Aligned_cols=107  Identities=16%  Similarity=0.119  Sum_probs=83.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   ++.+|+.+|.|++|.|+++||..++..+      ++++.+
T Consensus        53 l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~~---~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~  122 (220)
T 3sjs_A           53 IYQWFMGVDRDRSGTLEINELMMGQFPGGI-RLSPQT---ALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNL  122 (220)
T ss_dssp             HHHHHHHHCTTCCSSBCHHHHHHCCBGGGB-CCCHHH---HHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHH
Confidence            7888999999999988    5555555554 455655   8888888999999999999998888653      578888


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                      |+.+|.|++|+|+.+||.+++..++.....    ..+..++...|
T Consensus       123 F~~~D~d~~G~I~~~El~~~l~~~g~~~~~----~~~~~l~~~~d  163 (220)
T 3sjs_A          123 FVMNARARSGTLEPHEILPALQQLGFYINQ----RTSLLLHRLFA  163 (220)
T ss_dssp             HHHHCCSSTTEECHHHHHHHHHHHTCCCCH----HHHHHHHHHHC
T ss_pred             HHHHCCCCCCCCcHHHHHHHHHHhCCCCCH----HHHHHHHHHhc
Confidence            999999999999999999998888765443    34666666666

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.25  E-value=3.2e-12  Score=121.44  Aligned_cols=117  Identities=19%  Similarity=0.217  Sum_probs=81.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      +.++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++.........+.++.+
T Consensus        59 l~~~F~~~D~d~~G~Is~~El~~~l~~~g~-~~~~~~---~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~  134 (197)
T 3pm8_A           59 LRNIFIALDVDNSGTLSSQEILDGLKKIGY-QKIPPD---IHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIP  134 (197)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHC-----CHH---HHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHH
Confidence            8999999999999999    5566666654 455555   8999999999999999999999887554444567789999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhh--hccCcccccchhHHHHHhhhcccCc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQ--QEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l--~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      |+.+|.|++|+|+.+||.+++...  +....+    ..+.+++...|.+++
T Consensus       135 F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~----~~~~~l~~~~D~d~d  181 (197)
T 3pm8_A          135 FKFFDIDGNGKISVEELKRIFGRDDIENPLID----KAIDSLLQEVDLNGD  181 (197)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHC----CCHHHH----HHHHHHHHHHCTTCS
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHhcccCCCCCH----HHHHHHHHHHcCCCC
Confidence            999999999999999999999876  222222    346667776665443

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.24  E-value=2.9e-11  Score=110.46  Aligned_cols=95  Identities=17%  Similarity=0.226  Sum_probs=51.5

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      ++.+|..+|.|++|.|    +..++..++...++..+   +..+|...    +|.|+++||..++... ....+.+.++.
T Consensus        27 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~---~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~~~~~l~~   99 (166)
T 2mys_B           27 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE---LDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMG   99 (166)
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHH---HHHHHHHC----CCCcCHHHHHHHHHHHhccCCcHHHHHH
Confidence            7888888899988888    55555555431233333   34444322    4555555555555432 22233445555


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      +|+.+|.|++|+|+.+||.+++..++.
T Consensus       100 ~F~~~D~d~~G~I~~~el~~~l~~~g~  126 (166)
T 2mys_B          100 AFKVLDPDGKGSIKKSFLEELLTTGGG  126 (166)
T ss_pred             HHHHhCCCCCcceeHHHHHHHHHHcCC
Confidence            555555555555555555555555443

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.24  E-value=1.1e-11  Score=112.07  Aligned_cols=127  Identities=13%  Similarity=0.237  Sum_probs=94.6

Q ss_pred             CCCCchhhHHHHH-hcC-CCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhc---CCCC---
Q 008959           91 DKPIWNSEKKLLL-ETN-GPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSC---SVED---  149 (547)
Q Consensus        91 LnP~Wne~~kll~-e~~-~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l---~~~~---  149 (547)
                      +.|..-...+.++ ... .++.+.++..+.            +.++..+|..+|.|++|.| +.+++..+   ....   
T Consensus         7 l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~   86 (158)
T 2jnf_A            7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP   86 (158)
T ss_dssp             SCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCT
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccch
Confidence            3443333333344 333 455666665443            2338899999999999999 44443322   2111   


Q ss_pred             -CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          150 -PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       150 -~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                       .....   ++.+|+.+|.|++|.|+.+||..++..+|..++++++..+|+.+|.|+||.|+++||.+++..
T Consensus        87 ~~~~~~---~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  155 (158)
T 2jnf_A           87 EQMQQE---LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG  155 (158)
T ss_dssp             TTTSST---HHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred             hhHHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence             22333   899999999999999999999999999999999999999999999999999999999998854

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.24  E-value=5e-11  Score=109.74  Aligned_cols=109  Identities=17%  Similarity=0.206  Sum_probs=69.1

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++++|..+|.|++|.|    +..++..++...++..+   ++.+|+.+|.|++|.|+++||..++..      .++++.+
T Consensus         9 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~---~~~l~~~~D~~~~g~i~~~ef~~~~~~------~~~~~~~   79 (172)
T 2znd_A            9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVT---VRSIISMFDRENKAGVNFSEFTGVWKY------ITDWQNV   79 (172)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHH---HHHHHHHHCSSSSSEECHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHH---HHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHHHH
Confidence            6777777777777777    44444444422444554   667777777777777777777776653      2467777


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~  243 (547)
                      |+.+|.|++|.|+.+||..++..++.....    ..+..++...|.
T Consensus        80 F~~~D~d~~G~i~~~el~~~l~~~g~~~~~----~~~~~~~~~~d~  121 (172)
T 2znd_A           80 FRTYDRDNSGMIDKNELKQALSGFGYRLSD----QFHDILIRKFDR  121 (172)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHHHTTCCCCH----HHHHHHHHHHCT
T ss_pred             HHHHCCCCCCccCHHHHHHHHHHcCCCCCH----HHHHHHHHHhCC
Confidence            777777777777777777777666543322    235555555544

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.24  E-value=1.9e-11  Score=108.38  Aligned_cols=94  Identities=16%  Similarity=0.261  Sum_probs=79.4

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcC---CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCS---VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~---~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      ++..+|..+|.|++|.| +.+++..+.   ........   ++.+|+.+|.|++|.|+.+||..++..+|..++.+++..
T Consensus        43 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~  119 (142)
T 2bl0_C           43 AFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI---LRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAE  119 (142)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHH---HHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHH
T ss_pred             HHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHH---HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHH
Confidence            38899999999999999 544433222   11223334   899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHH
Q 008959          197 LFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      +|+.+| |++|.|+++||.+++
T Consensus       120 ~~~~~d-~~dg~i~~~eF~~~~  140 (142)
T 2bl0_C          120 FLGITE-TEKGQIRYDNFINTM  140 (142)
T ss_dssp             HHHHHC-CSSSEECSHHHHTTT
T ss_pred             HHHHhC-CCCCcEeHHHHHHHH
Confidence            999999 999999999999866

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.23  E-value=3.1e-11  Score=112.78  Aligned_cols=125  Identities=15%  Similarity=0.125  Sum_probs=96.2

Q ss_pred             hHHHHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHH
Q 008959          119 SDADSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANK  193 (547)
Q Consensus       119 ~~el~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee  193 (547)
                      ..+++++|..+|.| ++|.|    +..++..++.......+   ++.+|+.+|.|++|.|+++||..++..++...+.++
T Consensus        24 ~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~---~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~  100 (190)
T 2l2e_A           24 KKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAF---AEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDK  100 (190)
T ss_dssp             SHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHH---HHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHH---HHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHH
Confidence            34588899999999 89999    56666666442333333   899999999999999999999999998888888999


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhh----hcc--C--cccccchhHHHHHhhhcccCc
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQ----QEK--E--PLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l----~~~--~--~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ++.+|+.+|.|++|.|+++||..++...    +..  .  .+......+.+++...|.+++
T Consensus       101 ~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d  161 (190)
T 2l2e_A          101 LIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKD  161 (190)
T ss_dssp             HHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSS
T ss_pred             HHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999873    321  0  000111346667777665544

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.23  E-value=3.6e-11  Score=113.48  Aligned_cols=122  Identities=15%  Similarity=0.241  Sum_probs=94.1

Q ss_pred             HHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      ++++|..||.+ ++|.|    +..++..++.   .......++.+|+.+|.|++|.|+++||..++..++...+.++++.
T Consensus        16 l~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~---~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~   92 (198)
T 2r2i_A           16 CHQWYKKFMTECPSGQLTLYEFKQFFGLKNL---SPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRW   92 (198)
T ss_dssp             HHHHHHHHHHHCTTSEECHHHHHHHHTCCSC---CHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHH
Confidence            88999999998 89999    4455554433   3333344899999999999999999999999999888888899999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccC---cccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKE---PLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~---~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|+|+++||..++...+...   ........+..++...|.+++
T Consensus        93 ~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~d  145 (198)
T 2r2i_A           93 YFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGD  145 (198)
T ss_dssp             HHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCS
T ss_pred             HHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999998875211   111111236666777665544

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.23  E-value=1.7e-11  Score=115.73  Aligned_cols=118  Identities=22%  Similarity=0.210  Sum_probs=92.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++.........+.++.+
T Consensus        39 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~  114 (204)
T 3e3r_A           39 LARFFRQLDRDGSRSLDADEFRQGLAKLGL-VLDQAE---AEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAA  114 (204)
T ss_dssp             -CHHHHHHCTTCCSSBCHHHHHHHHHTTTC-CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHccCCCCCcCHHHHHHHHHHcCC-CCCHHH---HHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHH
Confidence            8899999999999999    6666776665 566666   8999999999999999999999998776655667789999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhcc---CcccccchhHHHHHhhhcc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQEK---EPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~~---~~~~~~~~~~~~~l~~~D~  243 (547)
                      |+.+|.|++|+|+.+||.+++...+..   .........+.+++...|.
T Consensus       115 F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~  163 (204)
T 3e3r_A          115 FAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDS  163 (204)
T ss_dssp             HHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSC
T ss_pred             HHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhc
Confidence            999999999999999999999754221   0011111346667766664

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.23  E-value=2.3e-11  Score=108.69  Aligned_cols=97  Identities=10%  Similarity=0.270  Sum_probs=78.7

Q ss_pred             HHHHHHHHhh-CCCCCchh-HHHHhhhcCC--------CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcc
Q 008959          120 DADSEVFDLL-DPSSSNKI-VGKISLSCSV--------EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV  189 (547)
Q Consensus       120 ~el~~~F~~~-D~d~dG~I-l~~ll~~l~~--------~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~  189 (547)
                      .++..+|..+ |.|++|.| +.+++..+..        .......   ++.+|+.+|.|++|.|+.+||..++..+|..+
T Consensus        40 ~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~  116 (148)
T 1m45_A           40 QLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED---FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKL  116 (148)
T ss_dssp             HHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH---HHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCC
T ss_pred             HHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHH---HHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCC
Confidence            3488999999 99999999 4444332221        1222334   89999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          190 AANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       190 ~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +++++..+|+.+|.|+||.|+++||.+++.
T Consensus       117 ~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1m45_A          117 TDAEVDELLKGVEVDSNGEIDYKKFIEDVL  146 (148)
T ss_dssp             CHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            999999999999999999999999999885

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.23  E-value=2.8e-11  Score=114.19  Aligned_cols=118  Identities=18%  Similarity=0.148  Sum_probs=91.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      +.++|..+|.|++|.|    +..++..++. .++ .+   +..+|+.+|.|++|.|+++||..++.... ....+.+..+
T Consensus        54 l~~~F~~~D~d~~G~i~~~El~~~l~~~g~-~~~-~~---~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~  127 (191)
T 3k21_A           54 LKSTFLVLDEDGKGYITKEQLKKGLEKDGL-KLP-YN---FDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCA  127 (191)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCC-TT---HHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCcHHHHHHHHHHcCC-CcH-HH---HHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHH
Confidence            8999999999999999    6667776665 344 44   88999999999999999999999885433 3567889999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhc--cCcccccchhHHHHHhhhcccCc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQE--KEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~--~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      |+.+|.|++|+|+.+||.+++...+.  ...+. ....+.+++...|.+++
T Consensus       128 F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~-~~~~~~~~~~~~D~d~d  177 (191)
T 3k21_A          128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQR-DVNRVKRMIRDVDKNND  177 (191)
T ss_dssp             HHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHH-HHHHHHHHHHHHCSSSS
T ss_pred             HHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHh-HHHHHHHHHHHhcCCCC
Confidence            99999999999999999999977322  22110 01236777777776554

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.23  E-value=3.9e-11  Score=113.27  Aligned_cols=103  Identities=13%  Similarity=0.176  Sum_probs=87.3

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-------cCCcchHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-------FGNQVAAN  192 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-------lg~~~~~e  192 (547)
                      ++..+|..+|.|++|.| +.+++..+.. .........++.+|+.+|.|++|.|+.+||..++..       .+...+++
T Consensus        74 ~~~~~~~~~D~d~dg~i~~~ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~  152 (204)
T 3e3r_A           74 EAEGVCRKWDRNGSGTLDLEEFLRALRP-PMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDE  152 (204)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHTSC-CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHH
T ss_pred             HHHHHHHHhccCCCCcCcHHHHHHHHHh-hcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHH
Confidence            38899999999999999 7777766654 223334455999999999999999999999999974       46667888


Q ss_pred             HHHHHHHHhcC-CCCCCcCHHHHHHHHHhhhcc
Q 008959          193 KKEELFKAADK-NGDGVVSVDELAALLALQQEK  224 (547)
Q Consensus       193 el~~~F~~~D~-d~dG~Is~~Ef~~~l~~l~~~  224 (547)
                      +++.+|+.+|. |+||.|+++||.+++...+..
T Consensus       153 ~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~  185 (204)
T 3e3r_A          153 VLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSAS  185 (204)
T ss_dssp             HHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCcCcHHHHHHHHHHcCcc
Confidence            99999999999 999999999999999988743

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.22  E-value=7e-11  Score=111.24  Aligned_cols=93  Identities=18%  Similarity=0.238  Sum_probs=75.7

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      +..+|..+|.|++|.| +.++...+..    .   ..++.+|+.+|.|++|.|+.+||..++..+|..++++++..+|+.
T Consensus        65 ~~~l~~~~D~d~dG~I~~~EF~~~~~~----~---~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~  137 (191)
T 1y1x_A           65 TEKLLHMYDKNHSGEITFDEFKDLHHF----I---LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK  137 (191)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHH----H---HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHH----H---HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            7888888898888888 6655544321    1   237888999999999999999999998888888888889999999


Q ss_pred             hcCCCCCCcCHHHHHHHHHhh
Q 008959          201 ADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +|.|+||.|+++||.+++...
T Consensus       138 ~D~d~dg~i~~~eF~~~~~~~  158 (191)
T 1y1x_A          138 FDRQRRGSLGFDDYVELSIFV  158 (191)
T ss_dssp             HCTTCSSSBCHHHHHHHHHHH
T ss_pred             hCCCCCCeEeHHHHHHHHHHH
Confidence            999999999999999888653

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.22  E-value=2.2e-11  Score=103.65  Aligned_cols=96  Identities=18%  Similarity=0.355  Sum_probs=80.5

Q ss_pred             hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKK  194 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel  194 (547)
                      +.++..+|..+|  ++|.| +.+++..+........   .++.+|+.+|.|++|.|+.+||..++..+   |..++.+++
T Consensus         8 ~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~~~~~~---~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~   82 (108)
T 1rro_A            8 AEDIAAALQECQ--DPDTFEPQKFFQTSGLSKMSAS---QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESET   82 (108)
T ss_dssp             HHHHHHHHHHTC--STTCCCHHHHHHHHSGGGSCHH---HHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHH
T ss_pred             HHHHHHHHHHcc--CCCCcCHHHHHHHHhcCcccHH---HHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHH
Confidence            445889999998  78888 7766655543222233   38999999999999999999999999998   677899999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          195 EELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +.+|+.+|.|++|.|+++||.+++.
T Consensus        83 ~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           83 KSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            9999999999999999999999873

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.22  E-value=7.5e-11  Score=111.03  Aligned_cols=112  Identities=23%  Similarity=0.270  Sum_probs=90.1

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++..      .++++.
T Consensus        28 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~-~~~~~~---~~~l~~~~D~d~dG~I~~~EF~~~~~~------~~~~~~   97 (191)
T 1y1x_A           28 ELMEWFRAVDTDGSGAISVPELNAALSSAGV-PFSLAT---TEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMRE   97 (191)
T ss_dssp             CHHHHHHHHCTTCSSSBCHHHHHHHHCBTTB-CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHH
T ss_pred             HHHHHHHHHcCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHH------HHHHHH
Confidence            38999999999999999    4445533332 455666   899999999999999999999999864      368999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|.|+.+||.+++..++....+    ..+.+++...|.+++
T Consensus        98 ~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~----~~~~~~~~~~D~d~d  143 (191)
T 1y1x_A           98 GFRKRDSSGDGRLDSNEVRAALLSSGYQVSE----QTFQALMRKFDRQRR  143 (191)
T ss_dssp             HHHHHCTTSSSCBCHHHHHHHHHTTSCCCCH----HHHHHHHHHHCTTCS
T ss_pred             HHHHhCCCCCCeEcHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCCC
Confidence            9999999999999999999999988765433    356677777665443

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.22  E-value=1.6e-11  Score=104.37  Aligned_cols=70  Identities=26%  Similarity=0.385  Sum_probs=65.1

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      ..++++...++++|+.+|.|++|.|+.+||..++..+|..+++++++++|+.+|.|+||.|+++||.++|
T Consensus        29 ~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             CCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            4456666679999999999999999999999999999999999999999999999999999999999987

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.21  E-value=8.1e-11  Score=105.61  Aligned_cols=84  Identities=20%  Similarity=0.319  Sum_probs=50.1

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEELFK  199 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~~F~  199 (547)
                      +..+|..+|.|++|.| +.+++..+............++.+|+.+|.|++|.|+.+||..++.. +|..++.+++.++|+
T Consensus        40 ~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~  119 (155)
T 3ll8_B           40 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD  119 (155)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence            5667777777777776 44433322211111111223677777777777777777777777766 466666777777776


Q ss_pred             H----hcCCC
Q 008959          200 A----ADKNG  205 (547)
Q Consensus       200 ~----~D~d~  205 (547)
                      .    +|.|+
T Consensus       120 ~~~~~~D~~~  129 (155)
T 3ll8_B          120 KTIINADKDG  129 (155)
T ss_dssp             HHHHHHCTTS
T ss_pred             HHHHHhCCCC
Confidence            6    66554

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.21  E-value=2e-11  Score=110.44  Aligned_cols=117  Identities=21%  Similarity=0.261  Sum_probs=87.9

Q ss_pred             hcCCCc-ccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCC---ChHHHHHHHHHHHhhc
Q 008959          104 ETNGPH-VARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDP---IETEKSFARRILSIVD  166 (547)
Q Consensus       104 e~~~~~-~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~---~~~e~~~l~~~f~~~D  166 (547)
                      ....++ .+.++..+.            +.++..+|..+|.|++|.| +.+++..+.....   .......++.+|+.+|
T Consensus        26 ~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D  105 (161)
T 1dtl_A           26 IFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFD  105 (161)
T ss_dssp             HHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHC
T ss_pred             HHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhC
Confidence            344455 666665433            3338889999999999999 4444332211000   1122234899999999


Q ss_pred             CCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          167 YNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       167 ~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .|++|.|+.+||..++..+|..++.+++..+|+.+|.|+||.|+++||.+++..
T Consensus       106 ~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  159 (161)
T 1dtl_A          106 KNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  159 (161)
T ss_dssp             TTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            999999999999999999998899999999999999999999999999999864

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.21  E-value=1.4e-11  Score=116.99  Aligned_cols=116  Identities=16%  Similarity=0.228  Sum_probs=83.6

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQD  170 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~d  170 (547)
                      ..+.++.+.++..|+            +.++..+|..+|.|++|.| +.+++..+.... .......++.+|+.+|.|++
T Consensus        65 ~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~-~~~~~~~l~~~F~~~D~d~~  143 (197)
T 3pm8_A           65 ALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQ-TYLKKEVCLIPFKFFDIDGN  143 (197)
T ss_dssp             HHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHH-HHCSHHHHHHHHHHHCTTCS
T ss_pred             HHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHH-hhhhHHHHHHHHHHHCCCCC
Confidence            444566777776554            2237889999999999999 777765543211 01112348999999999999


Q ss_pred             CcccHHHHHHHHHhc--CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          171 GQLSFKEFSDLISAF--GNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       171 G~Is~~Ef~~~l~~l--g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      |.|+.+||..++..+  +..++++++.++|+.+|.|+||.|+++||.++|.+
T Consensus       144 G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  195 (197)
T 3pm8_A          144 GKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK  195 (197)
T ss_dssp             SEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence            999999999999987  77789999999999999999999999999999864

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.20  E-value=3.6e-11  Score=115.07  Aligned_cols=125  Identities=15%  Similarity=0.188  Sum_probs=91.1

Q ss_pred             HHHHHHhhCCC-CCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH
Q 008959          122 DSEVFDLLDPS-SSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK  199 (547)
Q Consensus       122 l~~~F~~~D~d-~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~  199 (547)
                      ++++|+.||.+ ++|.| ..++...+............++.+|+.+|.|++|.|+++||..++..++...+.++++.+|+
T Consensus        21 i~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~  100 (211)
T 2ggz_A           21 THVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK  100 (211)
T ss_dssp             ---CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHH
Confidence            78889999988 89999 44443333222233333445899999999999999999999999998877788899999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHHhhhccC--cccccchhHHHHHhhhcccCc
Q 008959          200 AADKNGDGVVSVDELAALLALQQEKE--PLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~~l~~~~--~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .+|.|++|+|+++||.+++...+...  ........+.+++...|.+++
T Consensus       101 ~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~d  149 (211)
T 2ggz_A          101 LYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINND  149 (211)
T ss_dssp             HHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCS
T ss_pred             HhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCC
Confidence            99999999999999999998875311  111111236667777665443

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.20  E-value=6.1e-11  Score=110.85  Aligned_cols=118  Identities=14%  Similarity=0.147  Sum_probs=87.2

Q ss_pred             HHHHHHhh-CCCCCchh----HHHHhhhc----CCCCCChHHH--------HHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLL-DPSSSNKI----VGKISLSC----SVEDPIETEK--------SFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~I----l~~ll~~l----~~~~~~~~e~--------~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|..+ |.|++|.|    +..++..+    +. .++..+.        ..|+.+|+.+|.|++|.|+++||..++..
T Consensus        14 l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~-~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~   92 (191)
T 2ccm_A           14 ILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSW-PTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAE   92 (191)
T ss_dssp             HHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTC-CTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHHH
Confidence            89999999 99999999    55555555    43 4444441        11233349999999999999999999876


Q ss_pred             cC---------CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          185 FG---------NQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       185 lg---------~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.         .....+.++.+|+.+|.|++|.|+.+||.+++...+  ...    ..+.+++...|.+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~----~~~~~~~~~~D~d~d  157 (191)
T 2ccm_A           93 CVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPK----SDCDAAFDTLSDGGK  157 (191)
T ss_dssp             HHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCH----HHHHHHHHHHTTTTT
T ss_pred             HhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCH----HHHHHHHHHhCCCCC
Confidence            42         123456799999999999999999999999998776  221    346677777665443

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.20  E-value=2.5e-11  Score=110.62  Aligned_cols=97  Identities=21%  Similarity=0.291  Sum_probs=81.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      +..+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++.........+.+..+
T Consensus        29 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~  104 (166)
T 2aao_A           29 LKEMFNMIDADKSGQITFEELKAGLKRVGA-NLKESE---ILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAA  104 (166)
T ss_dssp             HHHHHHHHCTTCCSSBCHHHHHHHGGGGTC-CCCHHH---HHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHH
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHH
Confidence            8899999999999999    5556666654 556666   8999999999999999999999998665433456789999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      |+.+|.|++|.|+.+||.+++...+
T Consensus       105 F~~~D~d~~G~i~~~e~~~~l~~~~  129 (166)
T 2aao_A          105 FTYFDKDGSGYITPDELQQACEEFG  129 (166)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHTCC--
T ss_pred             HHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            9999999999999999999997765

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.20  E-value=8.4e-11  Score=106.60  Aligned_cols=118  Identities=17%  Similarity=0.164  Sum_probs=86.8

Q ss_pred             HHHHHHhhCCCCCchh----HHHH----hhhcCCCCCChHHHH--------HHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPSSSNKI----VGKI----SLSCSVEDPIETEKS--------FARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~l----l~~l~~~~~~~~e~~--------~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++++|..+|.|++|.|    +..+    +..++. .++..+..        .|..+|+.+|.|++|.|+++||..++...
T Consensus         6 l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~-~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~   84 (166)
T 3akb_A            6 IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGV-AARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAVKR   84 (166)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTC-CTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHHHH
T ss_pred             HHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            8899999999999999    3333    334454 45554422        23477899999999999999999988764


Q ss_pred             CCcch-------HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          186 GNQVA-------ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       186 g~~~~-------~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ....+       .+.++.+|+.+|.|++|.|+.+||..++...+  ...    ..+..++...|.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~----~~~~~~~~~~D~d~d  146 (166)
T 3akb_A           85 LRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPE----DLARQAAAALDTDGD  146 (166)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCH----HHHHHHHHHHCTTCS
T ss_pred             hccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCH----HHHHHHHHHhCCCCC
Confidence            32221       23489999999999999999999999998876  222    346677776665443

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.19  E-value=4.4e-11  Score=113.56  Aligned_cols=125  Identities=16%  Similarity=0.156  Sum_probs=97.2

Q ss_pred             hHHHHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHH
Q 008959          119 SDADSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANK  193 (547)
Q Consensus       119 ~~el~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee  193 (547)
                      +.++..+|..+|.+ ++|.|    +..++..+....++..+   ++.+|+.+|.|++|.|+++||..++..++...+.++
T Consensus        32 ~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~---~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~  108 (207)
T 2d8n_A           32 EEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAY---AQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQK  108 (207)
T ss_dssp             HHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHH---HHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTT
T ss_pred             HHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHH---HHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHH
Confidence            34588999999998 79999    55666666543344554   899999999999999999999999999887788889


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhh----h----ccCccc--ccchhHHHHHhhhcccCc
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQ----Q----EKEPLM--NCCPVCGETLEVADMVNT  246 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l----~----~~~~~~--~~~~~~~~~l~~~D~~~~  246 (547)
                      ++.+|+.+|.|++|+|+++||.+++..+    +    ...+..  .....+.+++...|.+++
T Consensus       109 ~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~d  171 (207)
T 2d8n_A          109 LEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDD  171 (207)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTT
T ss_pred             HHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCC
Confidence            9999999999999999999999999886    4    222211  011236667776665443

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.19  E-value=4.5e-11  Score=111.32  Aligned_cols=120  Identities=17%  Similarity=0.262  Sum_probs=88.8

Q ss_pred             HHHHHHhhCCCCCchh----HH-----HHhhhcCCCCCChHH--HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC---
Q 008959          122 DSEVFDLLDPSSSNKI----VG-----KISLSCSVEDPIETE--KSFARRILSIVDYNQDGQLSFKEFSDLISAFGN---  187 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~-----~ll~~l~~~~~~~~e--~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~---  187 (547)
                      ++++|..+|.|++|.|    +.     .++..++. .++..+  ...+..+|+.+|.|++|.|+++||..++..+..   
T Consensus        18 l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~-~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~   96 (191)
T 1uhk_A           18 HKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGA-TPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDEL   96 (191)
T ss_dssp             HHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCC-CHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCC-CchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchh
Confidence            8999999999999999    54     44555554 333331  114889999999999999999999998866321   


Q ss_pred             ----cchHHHHH----HHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          188 ----QVAANKKE----ELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       188 ----~~~~eel~----~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                          ....+.++    .+|+.+|.|++|+|+.+||.+++..++.....    ..+.+++...|.+++
T Consensus        97 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~----~~~~~~~~~~D~d~d  159 (191)
T 1uhk_A           97 EKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSS----EDCEETFRVCDIDES  159 (191)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSH----HHHHHHHHHSCCCTT
T ss_pred             hhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCCC
Confidence                01112343    89999999999999999999999988765433    357777777775443

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.19  E-value=1.6e-11  Score=114.52  Aligned_cols=119  Identities=17%  Similarity=0.237  Sum_probs=87.4

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcC---CCCC----ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCS---VEDP----IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~---~~~~----~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      +.++|..+|.|++|.|    +..++..+.   ....    .......+..+|+.+|.|++|.|+++||..++........
T Consensus        42 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~  121 (191)
T 3khe_A           42 LTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS  121 (191)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCC
T ss_pred             HHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccch
Confidence            9999999999999999    444444330   0000    0111234899999999999999999999999865544567


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .++++.+|+.+|.|++|.|+.+||.+++.  +.....    ..+.+++...|.+++
T Consensus       122 ~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~----~~~~~~~~~~D~~~d  171 (191)
T 3khe_A          122 RERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDD----ETWHQVLQECDKNND  171 (191)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCH----HHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCH----HHHHHHHHHhCCCCC
Confidence            78899999999999999999999999987  332222    346667776665443

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.19  E-value=1.2e-10  Score=107.09  Aligned_cols=109  Identities=12%  Similarity=0.225  Sum_probs=90.1

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK  199 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~  199 (547)
                      ++..+|..+|.|++|.| +.++...+..       ...++.+|+.+|.|++|.|+.+||..++..+|..++.+++..+|+
T Consensus        45 ~~~~l~~~~D~~~~g~i~~~ef~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~  117 (172)
T 2znd_A           45 TVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR  117 (172)
T ss_dssp             HHHHHHHHHCSSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            38899999999999999 6666554321       133899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          200 AADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .+|.|++|.|+++||..++...          ..+.+++...|.+++
T Consensus       118 ~~d~~~dg~i~~~eF~~~~~~~----------~~~~~~F~~~D~d~d  154 (172)
T 2znd_A          118 KFDRQGRGQIAFDDFIQGCIVL----------QRLTDIFRRYDTDQD  154 (172)
T ss_dssp             HHCTTCSSSEEHHHHHHHHHHH----------HHHHHHHHHHCTTSS
T ss_pred             HhCCCCCCcCcHHHHHHHHHHH----------HHHHHHHHHhCCCCC
Confidence            9999999999999999999764          234555555565444

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.19  E-value=8.1e-11  Score=104.38  Aligned_cols=113  Identities=19%  Similarity=0.265  Sum_probs=88.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc--CCcchHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF--GNQVAANKKE  195 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l--g~~~~~eel~  195 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..+|..   +++|.|+++||..++...  ......+.++
T Consensus         7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~   79 (145)
T 2bl0_B            7 IQECFQIFDKDNDGKVSIEELGSALRSLGK-NPTNAE---LNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEML   79 (145)
T ss_dssp             HHHHHHHHCTTCSSCEEGGGHHHHHHHTTC-CCCHHH---HHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHH
T ss_pred             HHHHHHHhCCCCcCccCHHHHHHHHHHhCC-CCCHHH---HHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHH
Confidence            8899999999999998    6667777765 556665   7777776   888999999999998765  3445667899


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccC
Q 008959          196 ELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      .+|+.+|.|++|+|+.+||..++...+.....    ..+.+++...|.++
T Consensus        80 ~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~----~~~~~~~~~~d~~~  125 (145)
T 2bl0_B           80 DAFRALDKEGNGTIQEAELRQLLLNLGDALTS----SEVEELMKEVSVSG  125 (145)
T ss_dssp             HHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCH----HHHHHHHTTCCCCT
T ss_pred             HHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCH----HHHHHHHHHcCCCC
Confidence            99999999999999999999999887654333    34666676666443

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.19  E-value=4.9e-11  Score=110.14  Aligned_cols=118  Identities=19%  Similarity=0.195  Sum_probs=88.3

Q ss_pred             HHHHHHhh-CCCCCchh----HHHHhhhcC----CCCCChHHHHHH--------HHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLL-DPSSSNKI----VGKISLSCS----VEDPIETEKSFA--------RRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~I----l~~ll~~l~----~~~~~~~e~~~l--------~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|..+ |.|++|.|    +..++..+.    . .++..+...+        +.+|+.+|.|++|.|+++||..++..
T Consensus        10 l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~   88 (185)
T 2sas_A           10 IKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKG-SLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEK   88 (185)
T ss_dssp             HHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGG-GSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence            89999999 99999999    444455544    3 4455543222        35599999999999999999999876


Q ss_pred             cC-C--------cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          185 FG-N--------QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       185 lg-~--------~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .. .        ....+.++.+|+.+|.|++|.|+.+||.+++..++.  +.    ..+.+++...|.+++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~--~~----~~~~~~~~~~D~d~d  153 (185)
T 2sas_A           89 TIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL--QC----ADVPAVYNVITDGGK  153 (185)
T ss_dssp             HHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC--CC----SSHHHHHHHHHTTTT
T ss_pred             HhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCC--CH----HHHHHHHHHhcCCCC
Confidence            42 1        234578999999999999999999999999977652  21    246677776665543

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.18  E-value=3.5e-11  Score=112.60  Aligned_cols=120  Identities=20%  Similarity=0.318  Sum_probs=84.5

Q ss_pred             HHHHHHhhCCCCCchh----HH-----HHhhhcCCCCCChHH--HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCc--
Q 008959          122 DSEVFDLLDPSSSNKI----VG-----KISLSCSVEDPIETE--KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQ--  188 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~-----~ll~~l~~~~~~~~e--~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~--  188 (547)
                      ++++|..+|.|++|.|    +.     .++..++. .++..+  ...+..+|+.+|.|++|.|+++||..++..+...  
T Consensus        22 l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~-~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~  100 (195)
T 1qv0_A           22 HKHMFDFLDINGNGKITLDEIVSKASDDICAKLEA-TPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSEL  100 (195)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTC-CHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCC-CccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhh
Confidence            8999999999999999    44     34455554 333331  1248889999999999999999999988653210  


Q ss_pred             -----chHHHHH----HHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          189 -----VAANKKE----ELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       189 -----~~~eel~----~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                           ...+.++    .+|+.+|.|++|+|+.+||.+++..++.....    ..+.+++...|.+++
T Consensus       101 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~----~~~~~~~~~~D~d~d  163 (195)
T 1qv0_A          101 KKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ----EDCEATFRHCDLDNA  163 (195)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCH----HHHHHHHHHSCCCTT
T ss_pred             hcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCCC
Confidence                 1112244    89999999999999999999999988765433    357777777765443

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.18  E-value=1e-10  Score=109.39  Aligned_cols=99  Identities=20%  Similarity=0.211  Sum_probs=84.3

Q ss_pred             HHHHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHH
Q 008959          120 DADSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK  194 (547)
Q Consensus       120 ~el~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel  194 (547)
                      .++.++|..||.+ ++|.|    +..++..++........   ++.+|+.+|.|++|.|+++||..++..++...+.+++
T Consensus        25 ~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~---~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~  101 (193)
T 1bjf_A           25 HEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKF---AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKL  101 (193)
T ss_dssp             HHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHH---HHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHH
Confidence            4488999999998 89999    55555555432223333   8999999999999999999999999988888888999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.+|+.+|.|++|.|+++||..++...
T Consensus       102 ~~~f~~~D~d~~G~I~~~E~~~~~~~~  128 (193)
T 1bjf_A          102 KWAFSMYDLDGNGYISKAEMLEIVQAI  128 (193)
T ss_dssp             HHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHhhcCCCCCCeECHHHHHHHHHHH
Confidence            999999999999999999999999875

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.17  E-value=2.4e-11  Score=108.48  Aligned_cols=100  Identities=21%  Similarity=0.300  Sum_probs=81.1

Q ss_pred             HHHHHHHHhhCCCCCchh-HHHHhhhcC---CCCC-ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHH
Q 008959          120 DADSEVFDLLDPSSSNKI-VGKISLSCS---VEDP-IETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANK  193 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I-l~~ll~~l~---~~~~-~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~ee  193 (547)
                      .++..+|..+|.+++|.| +.+++..+.   .... .......++.+|+.+|.|++|.|+.+||..++.. +|..++.++
T Consensus        47 ~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~  126 (153)
T 3ox6_A           47 MELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRD  126 (153)
T ss_dssp             HHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHH
T ss_pred             HHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHH
Confidence            338889999999999999 554433321   1111 1111244899999999999999999999999999 899999999


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +..+|+.+|.|++|.|+++||.+++.
T Consensus       127 ~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A          127 IEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             HHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            99999999999999999999998873

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.17  E-value=7.9e-11  Score=114.19  Aligned_cols=125  Identities=14%  Similarity=0.119  Sum_probs=95.5

Q ss_pred             hHHHHHHHHhhCC-CCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHH
Q 008959          119 SDADSEVFDLLDP-SSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANK  193 (547)
Q Consensus       119 ~~el~~~F~~~D~-d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee  193 (547)
                      +.+++++|..||. |++|.|    +..++..++...++..+   ++.+|+.+|.|++|.|+++||..++..++...+.++
T Consensus        50 ~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~---~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~  126 (224)
T 1s1e_A           50 KRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTY---AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK  126 (224)
T ss_dssp             HHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHH---HHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHH---HHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHHH
Confidence            3447888888887 489999    66666666543355555   899999999999999999999999988776678889


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhh----hcc----CcccccchhHHHHHhhhcccCc
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQ----QEK----EPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l----~~~----~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ++.+|+.+|.|++|+|+++||.+++..+    +..    ..+......+.+++...|.+++
T Consensus       127 l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d  187 (224)
T 1s1e_A          127 LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD  187 (224)
T ss_dssp             HHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999886    322    1110011346677777775544

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.17  E-value=1.4e-10  Score=110.31  Aligned_cols=124  Identities=16%  Similarity=0.154  Sum_probs=88.7

Q ss_pred             ecccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCC-CCChHHHHHHHHHH-------HhhcCCCCCcccHHHHHH
Q 008959          114 SVFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVE-DPIETEKSFARRIL-------SIVDYNQDGQLSFKEFSD  180 (547)
Q Consensus       114 sl~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~-~~~~~e~~~l~~~f-------~~~D~d~dG~Is~~Ef~~  180 (547)
                      .+.+.+.. ++++|..+|.|++|.|    +..++..++.. .++..+   +..++       +.+|.|++|.|+++||..
T Consensus        29 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~---~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~  105 (208)
T 2hpk_A           29 DLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQ---VEKMRDAVRVFFLHKGVEPVNGLLREDWVE  105 (208)
T ss_dssp             -------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHH---HHHHHHHHHHHHHHTTCBTTTBEEGGGHHH
T ss_pred             HcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHH---HHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence            33443444 8999999999999999    44555544320 355555   66677       999999999999999999


Q ss_pred             HHH---------hcC-CcchHHH-HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          181 LIS---------AFG-NQVAANK-KEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       181 ~l~---------~lg-~~~~~ee-l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ++.         .+. .....++ ++.+|+.+|.|++|.|+.+||.+++..++  ...    ..+.+++...|.+++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~----~~~~~~~~~~D~d~d  176 (208)
T 2hpk_A          106 ANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQ----EAAYTFFEKADTDKS  176 (208)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCT----THHHHHHHHHCTTCC
T ss_pred             HHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCH----HHHHHHHHHhCCCCC
Confidence            886         332 2233444 89999999999999999999999998887  222    347777777775544

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.17  E-value=1.1e-10  Score=103.29  Aligned_cols=110  Identities=21%  Similarity=0.316  Sum_probs=87.4

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcc---hHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV---AANKK  194 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~---~~eel  194 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..++.    +++|.|+++||..++.......   ..+.+
T Consensus         7 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   78 (140)
T 1ggw_A            7 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQ-NPTLAE---ITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEF   78 (140)
T ss_dssp             THHHHHHTCSSSSSEECHHHHHHHHHHTSC-CCCHHH---HHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCC-CCCHHH---HHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHH
Confidence            7889999999999999    6667777765 566655   666665    8999999999999997754322   34789


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcc
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~  243 (547)
                      +.+|+.+|.|++|+|+.+||.+++..++.....    ..+..++...|.
T Consensus        79 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~----~~~~~~~~~~d~  123 (140)
T 1ggw_A           79 VKGFQVFDKDATGMIGVGELRYVLTSLGEKLSN----EEMDELLKGVPV  123 (140)
T ss_dssp             HHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCH----HHHHHHHHHTTC
T ss_pred             HHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCH----HHHHHHHHhccC
Confidence            999999999999999999999999998765443    356667766665

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.17  E-value=6.3e-11  Score=110.51  Aligned_cols=99  Identities=19%  Similarity=0.229  Sum_probs=83.3

Q ss_pred             HHHHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHH
Q 008959          120 DADSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK  194 (547)
Q Consensus       120 ~el~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel  194 (547)
                      .++.++|+.||.+ ++|.|    +..++..+........+   ++.+|+.+|.|++|.|+++||..++..++...+.+++
T Consensus        25 ~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~---~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~  101 (190)
T 1g8i_A           25 KEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKF---ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKL  101 (190)
T ss_dssp             HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHH---HHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHH---HHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHH
Confidence            4489999999998 89999    55666655221223333   8999999999999999999999999887766788899


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.+|+.+|.|++|.|+++||.+++...
T Consensus       102 ~~~f~~~D~d~~G~i~~~e~~~~l~~~  128 (190)
T 1g8i_A          102 RWAFKLYDLDNDGYITRNEMLDIVDAI  128 (190)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence            999999999999999999999999874

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.17  E-value=8.8e-11  Score=104.49  Aligned_cols=99  Identities=11%  Similarity=0.185  Sum_probs=80.0

Q ss_pred             HHHHHHHHhh---CCCCCchh-HHHHhhhcCCC--CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHH
Q 008959          120 DADSEVFDLL---DPSSSNKI-VGKISLSCSVE--DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANK  193 (547)
Q Consensus       120 ~el~~~F~~~---D~d~dG~I-l~~ll~~l~~~--~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee  193 (547)
                      .++..+|..+   |.++ |.| +.+++..+...  .........++.+|+.+|.|++|.|+.+||..++..+|..++.++
T Consensus        44 ~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~  122 (149)
T 2mys_C           44 AEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE  122 (149)
T ss_pred             HHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHH
Confidence            3388899999   9999 998 55544332211  111222334899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +..+|+. |.|++|.|+++||.+++..
T Consensus       123 ~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C          123 VEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             HHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence            9999999 9999999999999998853

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.16  E-value=7.7e-11  Score=111.55  Aligned_cols=113  Identities=20%  Similarity=0.244  Sum_probs=87.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC-----------
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG-----------  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-----------  186 (547)
                      +.++|..+|.|++|.|    +..+ ..++. .+.      +..+|+.+|.|++|.|+++||..++....           
T Consensus        31 l~~~F~~~D~d~dG~I~~~El~~~-~~lg~-~~~------~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~  102 (202)
T 2bec_A           31 LHHRFRALDRNKKGYLSRMDLQQI-GALAV-NPL------GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQD  102 (202)
T ss_dssp             HHHHHHHHCSSCSSCCCHHHHHTC-HHHHH-STT------HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC---
T ss_pred             HHHHHHHHCCCCCCCcCHHHHHHH-HhcCC-Ccc------HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccc
Confidence            8899999999999999    4444 44443 222      78899999999999999999999998754           


Q ss_pred             ------CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh-hccCcccccchhHHHHHhh----hcccCc
Q 008959          187 ------NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ-QEKEPLMNCCPVCGETLEV----ADMVNT  246 (547)
Q Consensus       187 ------~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l-~~~~~~~~~~~~~~~~l~~----~D~~~~  246 (547)
                            .....++++.+|+.+|.|++|+|+.+||.+++... +.....    ..+.+++..    .|.+++
T Consensus       103 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~----~~~~~~~~~~~~~~D~d~d  169 (202)
T 2bec_A          103 PKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTE----EQLENIADRTVQEADEDGD  169 (202)
T ss_dssp             --CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCH----HHHHHHHHHHHHHHCSSCS
T ss_pred             cccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCH----HHHHHHHHHHHHHcCCCCC
Confidence                  34556789999999999999999999999999988 654333    234444444    665443

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.16  E-value=6.3e-11  Score=110.51  Aligned_cols=124  Identities=18%  Similarity=0.165  Sum_probs=94.2

Q ss_pred             HHHHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHH
Q 008959          120 DADSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK  194 (547)
Q Consensus       120 ~el~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel  194 (547)
                      .++.++|+.||.+ ++|.|    +..++..+........+   ++.+|+.+|.|++|.|+++||..++..++...+.+++
T Consensus        25 ~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~---~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~  101 (190)
T 1fpw_A           25 REIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDF---ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL  101 (190)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHH---HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHH
T ss_pred             HHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHH---HHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHH
Confidence            4488899999887 89999    55566655432233344   8999999999999999999999999998888888999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhh----hcc----CcccccchhHHHHHhhhcccCc
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQ----QEK----EPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l----~~~----~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.+|+.+|.|++|.|+++||..++...    +..    ..+......+.+++...|.+++
T Consensus       102 ~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d  161 (190)
T 1fpw_A          102 SWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNED  161 (190)
T ss_dssp             HHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCS
T ss_pred             HHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999884    211    0000111346666776665544

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.16  E-value=2e-10  Score=107.27  Aligned_cols=93  Identities=14%  Similarity=0.209  Sum_probs=76.2

Q ss_pred             HhhCCCCCchh-HHHHhhhcC--------CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          127 DLLDPSSSNKI-VGKISLSCS--------VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       127 ~~~D~d~dG~I-l~~ll~~l~--------~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ..+|.|++|.| +.+++..+.        ...........++.+|+.+|.|++|.|+.+||..++..+|  +++++++.+
T Consensus        71 ~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~~~~~~~  148 (191)
T 2ccm_A           71 KYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAA  148 (191)
T ss_dssp             HHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCHHHHHHH
T ss_pred             HhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCHHHHHHH
Confidence            89999999999 444432221        1111233345589999999999999999999999999887  888999999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          198 FKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      |+.+|.|+||.|+++||.+++...
T Consensus       149 ~~~~D~d~dG~i~~~Ef~~~~~~~  172 (191)
T 2ccm_A          149 FDTLSDGGKTMVTREIFARLWTEY  172 (191)
T ss_dssp             HHHHTTTTTSCCBHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999775

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.15  E-value=1.1e-10  Score=109.14  Aligned_cols=108  Identities=12%  Similarity=0.093  Sum_probs=87.7

Q ss_pred             HHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----CCcchHHHH
Q 008959          120 DADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----GNQVAANKK  194 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g~~~~~eel  194 (547)
                      .+++.+|..+|.|++|.| +.+++..+..       ...++.+|+.|| |++|+|+.+||..++..+    |..++++++
T Consensus        46 ~~~~~l~~~~D~d~~G~I~f~EF~~~~~~-------~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~  117 (174)
T 2i7a_A           46 DECRSLVALMELKVNGRLDQEEFARLWKR-------LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELL  117 (174)
T ss_dssp             HHHHHHHHHHCSSCSSEECHHHHHHHHHH-------HHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHH
Confidence            348889999999999999 7766554321       123899999999 999999999999999999    988999999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +++++.+| |+||.|+++||.+++...          ..+.++++..|..++
T Consensus       118 ~~l~~~~d-d~dG~I~~~EF~~~~~~~----------~~~~~~F~~~D~d~~  158 (174)
T 2i7a_A          118 HLVTLRYS-DSVGRVSFPSLVCFLMRL----------EAMAKTFRNLSKDGK  158 (174)
T ss_dssp             HHHHHHHS-CTTSEECHHHHHHHHHHH----------HHHHHHHHHHCSSSS
T ss_pred             HHHHHHHc-CCCCeEcHHHHHHHHHHH----------HHHHHHHHHhCCCCC
Confidence            99999999 999999999999998664          135555555565443

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.15  E-value=1.2e-10  Score=110.67  Aligned_cols=129  Identities=15%  Similarity=0.135  Sum_probs=90.7

Q ss_pred             CCCCCchhhHHHHH-hcCCCcccceecccC--------------hHHHHHHH-------HhhCCCCCchh-HHHHhhh--
Q 008959           90 TDKPIWNSEKKLLL-ETNGPHVARISVFED--------------SDADSEVF-------DLLDPSSSNKI-VGKISLS--  144 (547)
Q Consensus        90 tLnP~Wne~~kll~-e~~~~~~~~isl~e~--------------~~el~~~F-------~~~D~d~dG~I-l~~ll~~--  144 (547)
                      .+.+.+-...+.++ ....++.+.++..|.              +.++..++       ..+|.|++|.| +.+++..  
T Consensus        29 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~  108 (208)
T 2hpk_A           29 DLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR  108 (208)
T ss_dssp             -------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred             HcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            34444443333333 344555666664332              22366777       99999999999 4443332  


Q ss_pred             ----------cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHH
Q 008959          145 ----------CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDEL  214 (547)
Q Consensus       145 ----------l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef  214 (547)
                                +.. .+ ......++.+|+.+|.|++|.|+.+||..++..+|  ++++++..+|+.+|.|+||.|+++||
T Consensus       109 ~~~~~~~~~~~~~-~~-~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~I~~~EF  184 (208)
T 2hpk_A          109 VFAEAERERERRG-EP-SLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTEL  184 (208)
T ss_dssp             HHHHHHHHHHHTT-CC-CHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHCTTCCSSBCHHHH
T ss_pred             HHhhhhhhhhccC-Ch-HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence                      221 22 22223378999999999999999999999999998  88899999999999999999999999


Q ss_pred             HHHHHhhh
Q 008959          215 AALLALQQ  222 (547)
Q Consensus       215 ~~~l~~l~  222 (547)
                      .+++....
T Consensus       185 ~~~~~~~~  192 (208)
T 2hpk_A          185 VHLFRKFW  192 (208)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99997753

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.15  E-value=1.9e-10  Score=107.36  Aligned_cols=96  Identities=18%  Similarity=0.349  Sum_probs=79.6

Q ss_pred             HHHHHHhhCCCCCchh-HHHHh---hhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc------------
Q 008959          122 DSEVFDLLDPSSSNKI-VGKIS---LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF------------  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll---~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l------------  185 (547)
                      +..+|..+|.|++|.| +.++.   ..+.. .....+   ++.+|+.+|.|++|.|+++||..++..+            
T Consensus        65 ~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~-~~~~~~---~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~  140 (190)
T 2l2e_A           65 AEYVFNVFDADKNGYIDFKEFICALSVTSR-GELNDK---LIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPE  140 (190)
T ss_dssp             HHHHHHHHCSSSTTCEEHHHHHHHHTTSSC-SCSHHH---HHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCS
T ss_pred             HHHHHHHhcCCCCCeEeHHHHHHHHHHHcC-CCHHHH---HHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCccc
Confidence            8889999999999999 55444   33332 334444   8999999999999999999999999772            


Q ss_pred             CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          186 GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       186 g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +...+.++++++|+.+|.|+||.|+++||.+++...
T Consensus       141 ~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  176 (190)
T 2l2e_A          141 DEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD  176 (190)
T ss_dssp             SCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTC
T ss_pred             ccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence            234678899999999999999999999999999664

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.15  E-value=1.1e-10  Score=112.99  Aligned_cols=111  Identities=11%  Similarity=0.135  Sum_probs=89.1

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQD  170 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~d  170 (547)
                      ..+.++.+.++..|.            +.++..+|..+|.|++|.| +.++...+..    .   ..++.+|+.+|.|++
T Consensus        59 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~----~---~~l~~~F~~~D~d~~  131 (220)
T 3sjs_A           59 GVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKF----M---ELAYNLFVMNARARS  131 (220)
T ss_dssp             HHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH----H---HHHHHHHHHHCCSST
T ss_pred             HhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH----H---HHHHHHHHHHCCCCC
Confidence            334555666654333            3348899999999999999 6666554432    1   238999999999999


Q ss_pred             CcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          171 GQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       171 G~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      |.|+.+||..++..+|..+++++++.+|+.+| |+||.|+++||.+++..+.
T Consensus       132 G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~  182 (220)
T 3sjs_A          132 GTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFAA  182 (220)
T ss_dssp             TEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999 9999999999999997753

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.15  E-value=7.8e-11  Score=111.50  Aligned_cols=100  Identities=21%  Similarity=0.357  Sum_probs=82.2

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCC----------------ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDP----------------IETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~----------------~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..+|.|++|.| +.+++..+.....                .......++.+|+.+|.|++|.|+.+||..++..
T Consensus        63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~  142 (202)
T 2bec_A           63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL  142 (202)
T ss_dssp             HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            6789999999999999 5555443322111                2223344999999999999999999999999999


Q ss_pred             c-CCcchHHHHHHHHHH----hcCCCCCCcCHHHHHHHHHhh
Q 008959          185 F-GNQVAANKKEELFKA----ADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       185 l-g~~~~~eel~~~F~~----~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      + |..++++++..+|+.    +|.|+||.|+++||.+++...
T Consensus       143 ~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~  184 (202)
T 2bec_A          143 MVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM  184 (202)
T ss_dssp             SCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTS
T ss_pred             hcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHh
Confidence            8 988999999998888    999999999999999988653

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.14  E-value=1.1e-10  Score=105.20  Aligned_cols=96  Identities=11%  Similarity=0.132  Sum_probs=80.3

Q ss_pred             HHHHHHhhCCCCCchh-HHHHh---hhcCCC-CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKIS---LSCSVE-DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll---~~l~~~-~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +..+ ..+|.|++|.| +.+++   ...... .....+   ++.+|+.+|.|++|.|+.+||..++..+|..++.+++..
T Consensus        49 ~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~---l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~  124 (156)
T 1wdc_C           49 VFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFAD---YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE  124 (156)
T ss_dssp             HHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHH---HHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHH
T ss_pred             HHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHH
Confidence            6777 88999999999 44443   322211 222333   899999999999999999999999999999999999999


Q ss_pred             HHHH--hcCCCCCCcCHHHHHHHHHhh
Q 008959          197 LFKA--ADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       197 ~F~~--~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +|+.  +|.|++|.|+++||.+++...
T Consensus       125 ~~~~~~~D~d~dg~i~~~eF~~~~~~~  151 (156)
T 1wdc_C          125 IIKLTDLQEDLEGNVKYEDFVKKVMAG  151 (156)
T ss_dssp             HHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred             HHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence            9999  999999999999999999764

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.14  E-value=1.9e-10  Score=109.04  Aligned_cols=95  Identities=19%  Similarity=0.285  Sum_probs=78.9

Q ss_pred             HHHHHHhhCCCCCchh-H---HHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----C-------
Q 008959          122 DSEVFDLLDPSSSNKI-V---GKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----G-------  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l---~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g-------  186 (547)
                      +..+|..+|.|++|.| +   ..++..+.. .+..++   ++.+|+.+|.|++|.|+++||..++..+    |       
T Consensus        61 ~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~-~~~~~~---~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~  136 (204)
T 1jba_A           61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLR-GTLEHK---LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVE  136 (204)
T ss_dssp             HHHHHHHHCCSSSSEECHHHHHHHHHHHSS-CCCTHH---HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTT
T ss_pred             HHHHHHHHcCCCCCeEeHHHHHHHHHHHcc-CCHHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCcccc
Confidence            8899999999999999 4   444444443 344555   8999999999999999999999999876    2       


Q ss_pred             ------CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          187 ------NQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       187 ------~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                            ...+.++++.+|+.+|.|+||.|+++||.+++..
T Consensus       137 ~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~  176 (204)
T 1jba_A          137 AEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR  176 (204)
T ss_dssp             SSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred             ccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHc
Confidence                  1156678999999999999999999999999954

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.14  E-value=1.2e-10  Score=108.59  Aligned_cols=112  Identities=19%  Similarity=0.277  Sum_probs=87.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++++|..+|.|++|.|    +..++..++.   ...+   +..+|+.+|.|++|.|+++||..++..... ...+++..+
T Consensus        41 l~~~F~~~D~d~~G~i~~~El~~~l~~~g~---~~~~---~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~  113 (180)
T 3mse_B           41 INELFYKLDTNHNGSLSHREIYTVLASVGI---KKWD---INRILQALDINDRGNITYTEFMAGCYRWKN-IESTFLKAA  113 (180)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHHHTTC---CHHH---HHHHHHHHCTTCCSEECHHHHHHHHSCCTT-C--CHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHcCC---CHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHhccc-CCHHHHHHH
Confidence            8999999999999999    6666666654   2344   899999999999999999999998876432 345789999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      |+.+|.|++|+|+.+||.+++..  ...+.    ..+.+++...|.+++
T Consensus       114 F~~~D~d~~G~I~~~El~~~l~~--~~~~~----~~~~~~~~~~d~~~d  156 (180)
T 3mse_B          114 FNKIDKDEDGYISKSDIVSLVHD--KVLDN----NDIDNFFLSVHSIKK  156 (180)
T ss_dssp             HHHHCTTCSSCBCHHHHHHHTTT--SSCCH----HHHHHHHHHHHTC--
T ss_pred             HHHHCCCCCCCCCHHHHHHHHcC--CCCCH----HHHHHHHHHhhhccC
Confidence            99999999999999999999972  22222    346777777776544

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.14  E-value=1.7e-10  Score=122.99  Aligned_cols=117  Identities=26%  Similarity=0.405  Sum_probs=95.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      ++++|+.+|.|++|.|    +..++..++. .++.++   ++.+|+.+|.|++|.|+++||..++..+ ......++++.
T Consensus       314 l~~~F~~fD~D~dG~Is~~EL~~~L~~lg~-~~s~ee---l~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~  389 (450)
T 3sg6_A          314 FKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIRE  389 (450)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHH---HHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHH
Confidence            8999999999999999    6667777665 566666   8999999999999999999999999763 34456778999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|+|+.+||.+++..++....+    ..+.+++...|.+++
T Consensus       390 aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~----eei~~Lf~~~D~D~D  435 (450)
T 3sg6_A          390 AFRVFDKDGNGYISAAELRHVMTNLGEKLTD----EEVDEMIREADIDGD  435 (450)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHHTCCCCH----HHHHHHHHHHCTTSS
T ss_pred             HHHHhCCCCCCeEeHHHHHHHHHHhCCCCCH----HHHHHHHHHhCCCCC
Confidence            9999999999999999999999998875544    457777777775443

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.14  E-value=1.5e-10  Score=107.94  Aligned_cols=97  Identities=22%  Similarity=0.411  Sum_probs=80.9

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh----cC------
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA----FG------  186 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~----lg------  186 (547)
                      .+..+|..+|.|++|.|    +..++..+.. ....++   ++.+|+.+|.|++|.|+++||..++..    +|      
T Consensus        64 ~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~-~~~~~~---~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~  139 (190)
T 1fpw_A           64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSR-GTLEEK---LSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLN  139 (190)
T ss_dssp             HHHHHHHTCCSSCSSEECHHHHHHHHHHHSC-CCSTHH---HHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSS
T ss_pred             HHHHHHHHHCCCCCCcEeHHHHHHHHHHHcc-CCcHHH---HHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcc
Confidence            37889999999999999    4444444443 344555   899999999999999999999999987    34      


Q ss_pred             --CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          187 --NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       187 --~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                        ...+.++++.+|+.+|.|+||.|+++||.+++...
T Consensus       140 ~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  176 (190)
T 1fpw_A          140 EDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVD  176 (190)
T ss_dssp             CCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSS
T ss_pred             cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence              23677899999999999999999999999999663

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.13  E-value=2.7e-10  Score=104.44  Aligned_cols=105  Identities=16%  Similarity=0.185  Sum_probs=76.2

Q ss_pred             HHHHhhCCCCCchh----HHHHhhhcCCC----CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHH
Q 008959          124 EVFDLLDPSSSNKI----VGKISLSCSVE----DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE  195 (547)
Q Consensus       124 ~~F~~~D~d~dG~I----l~~ll~~l~~~----~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~  195 (547)
                      +.|..+|.|++|.|    +..++..++..    .++..+   ++.+|+.+|.|++|.|+++||..++...      ++++
T Consensus         5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~---~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~   75 (167)
T 1gjy_A            5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLET---CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWR   75 (167)
T ss_dssp             HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHH---HHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHH
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHH---HHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHH
Confidence            35778888888888    55666665541    345555   7888888888888888888888887542      5788


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhh
Q 008959          196 ELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVA  241 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~  241 (547)
                      .+|+.+|.|++|.|+.+||..++..++.....    ..+.+++...
T Consensus        76 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~----~~~~~~~~~~  117 (167)
T 1gjy_A           76 QHFISFDSDRSGTVDPQELQKALTTMGFRLNP----QTVNSIAKRY  117 (167)
T ss_dssp             HHHHHHCTTCCSEECHHHHHHHHHTTTCCCCH----HHHHHHHHHT
T ss_pred             HHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCH----HHHHHHHHHh
Confidence            88888888888888888888888877654332    2355555444

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.13  E-value=1.4e-10  Score=102.78  Aligned_cols=113  Identities=13%  Similarity=0.218  Sum_probs=87.4

Q ss_pred             cCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCC-CChHHHHHHHHHHHhhcCCCC
Q 008959          105 TNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVED-PIETEKSFARRILSIVDYNQD  170 (547)
Q Consensus       105 ~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~-~~~~e~~~l~~~f~~~D~d~d  170 (547)
                      ...++.+.++..+.            ..++..+|..   +++|.| +.+++..+.... ........++.+|+.+|.|++
T Consensus        14 ~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~   90 (145)
T 2bl0_B           14 FDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGN   90 (145)
T ss_dssp             HCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHHCSSSS
T ss_pred             hCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHhCCCCC
Confidence            34455666665443            2236666666   889999 666655544321 222233448999999999999


Q ss_pred             CcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          171 GQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       171 G~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      |.|+.+||..++..+|..++.+++..+|+.+|.|++|.|+++||.+++..
T Consensus        91 G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           91 GTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             SEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             CeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999865

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.13  E-value=1.4e-10  Score=109.27  Aligned_cols=95  Identities=19%  Similarity=0.277  Sum_probs=78.2

Q ss_pred             HHHHHHhhCCCCCchh-HH---HHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC------CcchH
Q 008959          122 DSEVFDLLDPSSSNKI-VG---KISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG------NQVAA  191 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~---~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg------~~~~~  191 (547)
                      +..+|..+|.|++|.| +.   .++..+.. .....+   ++.+|+.+|.|++|.|+++||..++..++      ...+.
T Consensus        54 ~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~-~~~~~~---~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~  129 (198)
T 2r2i_A           54 VEQMFETFDFNKDGYIDFMEYVAALSLVLK-GKVDQK---LRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTA  129 (198)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHHHSS-CCHHHH---HHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCH
T ss_pred             HHHHHHHHCCCCCCeEcHHHHHHHHHHHcc-CchHHH---HHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhH
Confidence            8899999999999999 44   44444443 333444   89999999999999999999999999875      34444


Q ss_pred             -HHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          192 -NKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       192 -eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                       +.+..+|+.+|.|+||.|+++||.+++..
T Consensus       130 ~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  159 (198)
T 2r2i_A          130 EEFTNMVFDKIDINGDGELSLEEFMEGVQK  159 (198)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence             45999999999999999999999999854

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.13  E-value=1.9e-10  Score=107.16  Aligned_cols=112  Identities=15%  Similarity=0.189  Sum_probs=86.9

Q ss_pred             hcCCCcccceecccC----------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCC-CCChHHHHHHHHHHHhhcCCCCC
Q 008959          104 ETNGPHVARISVFED----------SDADSEVFDLLDPSSSNKI-VGKISLSCSVE-DPIETEKSFARRILSIVDYNQDG  171 (547)
Q Consensus       104 e~~~~~~~~isl~e~----------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~-~~~~~e~~~l~~~f~~~D~d~dG  171 (547)
                      ....++.+.++..|+          +.++..+|..+|.|++|.| +.+++..+... ....++   ++.+|+.+|.|++|
T Consensus        47 ~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~---~~~~F~~~D~d~~G  123 (180)
T 3mse_B           47 KLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTF---LKAAFNKIDKDEDG  123 (180)
T ss_dssp             HHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CH---HHHHHHHHCTTCSS
T ss_pred             HhCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHH---HHHHHHHHCCCCCC
Confidence            445566777775554          2237889999999999999 66665544321 122233   89999999999999


Q ss_pred             cccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCC--------CCcCHHHHHHHHHh
Q 008959          172 QLSFKEFSDLISAFGNQVAANKKEELFKAADKNGD--------GVVSVDELAALLAL  220 (547)
Q Consensus       172 ~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~d--------G~Is~~Ef~~~l~~  220 (547)
                      .|+.+||..++.  +..++++++.++|+.+|.|+|        |.|+++||.++|..
T Consensus       124 ~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          124 YISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             CBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred             CCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence            999999999998  567899999999999999988        99999999999854

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.13  E-value=2.1e-10  Score=108.19  Aligned_cols=113  Identities=15%  Similarity=0.231  Sum_probs=87.4

Q ss_pred             hcCCCcccceecccC-----------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCC-CCChHHHHHHHHHHHhhcCCCC
Q 008959          104 ETNGPHVARISVFED-----------SDADSEVFDLLDPSSSNKI-VGKISLSCSVE-DPIETEKSFARRILSIVDYNQD  170 (547)
Q Consensus       104 e~~~~~~~~isl~e~-----------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~-~~~~~e~~~l~~~f~~~D~d~d  170 (547)
                      ..+.++.+.++..|.           ..++..+|..+|.|++|.| +.+++..+... ....+.   ++.+|+.+|.|++
T Consensus        60 ~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~---l~~~F~~~D~d~~  136 (191)
T 3k21_A           60 VLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKL---IYCAFRVFDVDND  136 (191)
T ss_dssp             HHCTTCSSEECHHHHHHHHHHTTCCCCTTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHH---HHHHHHHHSTTCS
T ss_pred             HHCCCCCCCCcHHHHHHHHHHcCCCcHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHH---HHHHHHHhCCCCC
Confidence            445556666665443           2237889999999999999 66665544321 122333   8999999999999


Q ss_pred             CcccHHHHHHHHHh--cCCcchH---HHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          171 GQLSFKEFSDLISA--FGNQVAA---NKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       171 G~Is~~Ef~~~l~~--lg~~~~~---eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      |.|+.+||..++..  .+..+++   +++.++|+.+|.|+||.|+++||.++|+
T Consensus       137 G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          137 GEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             SCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             CcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence            99999999999988  4555655   4699999999999999999999999873

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.13  E-value=1.2e-10  Score=108.42  Aligned_cols=100  Identities=18%  Similarity=0.179  Sum_probs=79.5

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCC---------CCChHH-HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVE---------DPIETE-KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~---------~~~~~e-~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      +..+|..+|.|++|.| +.+++..+...         ....+. ...++.+|+.+|.|++|.|+.+||..++..+|..++
T Consensus        64 ~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~  143 (191)
T 1uhk_A           64 VEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQS  143 (191)
T ss_dssp             HHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCS
T ss_pred             HHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCC
Confidence            5668999999999999 44443322110         011111 112348999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+++..+|+.+|.|+||.|+++||.+++...
T Consensus       144 ~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~  174 (191)
T 1uhk_A          144 SEDCEETFRVCDIDESGQLDVDEMTRQHLGF  174 (191)
T ss_dssp             HHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            9999999999999999999999999999764

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.12  E-value=2.7e-10  Score=107.74  Aligned_cols=116  Identities=16%  Similarity=0.107  Sum_probs=89.2

Q ss_pred             ChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchH
Q 008959          118 DSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAA  191 (547)
Q Consensus       118 ~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~  191 (547)
                      .+.. +..+|..+|.|++|.|    +..++..++. .++..+   +..++..+    +|.|+++||..++.. +......
T Consensus        54 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~-~~~~~~---~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~  125 (196)
T 3dtp_E           54 HQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGR-LCTEQE---LDSMVAEA----PGPINFTMFLTIFGDRIAGTDEE  125 (196)
T ss_dssp             TTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSC-CCCHHH---HHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCH
T ss_pred             HHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCC-CCCHHH---HHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcH
Confidence            3344 8899999999999999    6667777765 566666   77777765    789999999998876 3445567


Q ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          192 NKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       192 eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.+..+|+.+|.|++|+|+.+||.+++ .++.....    ..+..++...|.+++
T Consensus       126 ~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~----~~~~~l~~~~D~d~d  175 (196)
T 3dtp_E          126 DVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQ----DEVDQALSEAPIDGN  175 (196)
T ss_dssp             HHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCH----HHHHHHHHSSCEETT
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCH----HHHHHHHHHcCCCCC
Confidence            789999999999999999999999999 87765443    356777777665443

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.12  E-value=2.4e-10  Score=109.32  Aligned_cols=95  Identities=16%  Similarity=0.265  Sum_probs=78.4

Q ss_pred             HHHHHHhhCCCCCchh-HHHH---hhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC-----CcchH-
Q 008959          122 DSEVFDLLDPSSSNKI-VGKI---SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG-----NQVAA-  191 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~l---l~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-----~~~~~-  191 (547)
                      +..+|..+|.|++|.| +.++   +..+.. .....+   ++.+|+.+|.|++|.|+++||..++..++     ...+. 
T Consensus        59 ~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~-~~~~~~---l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~  134 (211)
T 2ggz_A           59 IDQVYNTFDTNKDGFVDFLEFIAAVNLIMQ-EKMEQK---LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPE  134 (211)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHSC-SSHHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHH
T ss_pred             HHHHHHHHcCCCCCeEeHHHHHHHHHHhcc-CchHHH---HHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHH
Confidence            8899999999999999 4444   443332 333333   89999999999999999999999999875     44444 


Q ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          192 NKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       192 eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.++.+|+.+|.|+||.|+++||.+++..
T Consensus       135 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  163 (211)
T 2ggz_A          135 EFINLVFHKIDINNDGELTLEEFINGMAK  163 (211)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence            55899999999999999999999999975

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.12  E-value=1.6e-10  Score=110.00  Aligned_cols=61  Identities=25%  Similarity=0.340  Sum_probs=32.3

Q ss_pred             HHHhhcCCCCCcccHHHHHHHHHhcCCc----------------chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          161 ILSIVDYNQDGQLSFKEFSDLISAFGNQ----------------VAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       161 ~f~~~D~d~dG~Is~~Ef~~~l~~lg~~----------------~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +|+.+|.+++|.|+++||..++......                ...++++.+|+.+|.|++|+|+.+||.+++..+
T Consensus        66 l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~  142 (208)
T 2ct9_A           66 IINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMM  142 (208)
T ss_dssp             HHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHH
Confidence            4555555555555555555555443210                134455555555555555555555555555554

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.12  E-value=2.7e-10  Score=102.86  Aligned_cols=111  Identities=17%  Similarity=0.226  Sum_probs=85.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~  196 (547)
                      ++.+|..+|.|++|.|    +..++..++. .++..+   +..+++    +++|.|+++||..++.. +....+.++++.
T Consensus        20 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   91 (156)
T 1wdc_B           20 MKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKE---LTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRN   91 (156)
T ss_dssp             HHHHHHHHCTTCSSSCCHHHHHHHHHHHSS-CCCHHH---HHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHH----hCCCcCcHHHHHHHHHHHhcCCChHHHHHH
Confidence            8999999999999999    6667777765 566655   666664    57899999999998876 344456788999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhccc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMV  244 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~  244 (547)
                      +|+.+|.|++|+|+.+||..++..++.....    ..+..++...|.+
T Consensus        92 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~d~~  135 (156)
T 1wdc_B           92 AFAMFDEQETKKLNIEYIKDLLENMGDNFNK----DEMRMTFKEAPVE  135 (156)
T ss_dssp             HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCH----HHHHHHHHHCCEE
T ss_pred             HHHHHCcCCCCccCHHHHHHHHHHhCCCCCH----HHHHHHHHhcCCC
Confidence            9999999999999999999999887654433    3466666665543

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.12  E-value=2.4e-10  Score=104.46  Aligned_cols=91  Identities=19%  Similarity=0.335  Sum_probs=61.7

Q ss_pred             HHHhhCCCCCchh----HHHHhhhcCCC----CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          125 VFDLLDPSSSNKI----VGKISLSCSVE----DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       125 ~F~~~D~d~dG~I----l~~ll~~l~~~----~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      .|..+|.|++|.|    +..++..++..    .++..+   ++.+|+.+|.|++|.|+++||..++..      .++++.
T Consensus         4 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~---~~~l~~~~D~~~~g~i~~~eF~~~~~~------~~~~~~   74 (165)
T 1k94_A            4 TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLET---CRIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKE   74 (165)
T ss_dssp             HHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHH---HHHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHH
T ss_pred             HHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHH---HHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHHH
Confidence            4667777777777    55555555431    334444   677777777777777777777777654      256777


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhcc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEK  224 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~  224 (547)
                      +|+.+|.|++|.|+.+||.+++..++..
T Consensus        75 ~F~~~D~d~~G~i~~~el~~~l~~~g~~  102 (165)
T 1k94_A           75 NFMTVDQDGSGTVEHHELRQAIGLMGYR  102 (165)
T ss_dssp             HHHHHCTTCCSBCCHHHHHHHHHHTTCC
T ss_pred             HHHHhCCCCCceECHHHHHHHHHHhCCC
Confidence            7777777777777777777777766544

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.12  E-value=1.3e-10  Score=114.31  Aligned_cols=130  Identities=14%  Similarity=0.182  Sum_probs=94.7

Q ss_pred             cChHH-HHHHHHhhCCCCCchh----HHHHhh----hcCCC-CCChHHH-HHHHHHHHhhcCCCCCcccHHHHHHH----
Q 008959          117 EDSDA-DSEVFDLLDPSSSNKI----VGKISL----SCSVE-DPIETEK-SFARRILSIVDYNQDGQLSFKEFSDL----  181 (547)
Q Consensus       117 e~~~e-l~~~F~~~D~d~dG~I----l~~ll~----~l~~~-~~~~~e~-~~l~~~f~~~D~d~dG~Is~~Ef~~~----  181 (547)
                      +.+.+ ++++|..+|.|++|.|    +..++.    .++.. .++..+. ..+..+|..+|.|++|.|+++||..+    
T Consensus         7 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~   86 (272)
T 2be4_A            7 NLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQ   86 (272)
T ss_dssp             CCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCH
T ss_pred             hcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhh
Confidence            34444 9999999999999999    555655    56542 4555552 33445679999999999999999999    


Q ss_pred             -------HHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh----hccCcccccchhHHHHHhhhcccCc
Q 008959          182 -------ISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ----QEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       182 -------l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l----~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                             +...+...+.++++.+|+.+|.|++|.|+.+||..++..+    +...........+..++...|..++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~d  162 (272)
T 2be4_A           87 EENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKD  162 (272)
T ss_dssp             HHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCS
T ss_pred             hHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCC
Confidence                   5556666778899999999999999999999999999887    4333221111123446666665443

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.11  E-value=2.1e-10  Score=99.71  Aligned_cols=92  Identities=21%  Similarity=0.340  Sum_probs=75.7

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcC---CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCS---VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~---~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      +..+|..+|.|++|.| +.++...+.   .... ......++.+|+.+|.|++|.|+.+||..++..++...    +..+
T Consensus        38 ~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~~  112 (134)
T 1jfj_A           38 LQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDL-SDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQ  112 (134)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSS-HHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH----HHHH
T ss_pred             HHHHHHHHcCCCCCeEcHHHHHHHHHHhccccc-CCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH----HHHH
Confidence            8899999999999999 666555442   1122 22223399999999999999999999999998877544    9999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHH
Q 008959          198 FKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      |+.+|.|++|.|+++||.+++
T Consensus       113 ~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A          113 VMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHhCCCCCCcEeHHHHHHHh
Confidence            999999999999999999876

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.11  E-value=1.4e-10  Score=108.05  Aligned_cols=96  Identities=21%  Similarity=0.410  Sum_probs=78.6

Q ss_pred             HHHHHHhhCCCCCchh-HHH---HhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----C-------
Q 008959          122 DSEVFDLLDPSSSNKI-VGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----G-------  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~---ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g-------  186 (547)
                      +..+|..+|.|++|.| +.+   ++..+.. ....++   ++.+|+.+|.|++|.|+++||..++..+    |       
T Consensus        65 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~-~~~~~~---~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~  140 (190)
T 1g8i_A           65 ATFVFNVFDENKDGRIEFSEFIQALSVTSR-GTLDEK---LRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPE  140 (190)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHHH-CCHHHH---HHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCG
T ss_pred             HHHHHHHHhcCCCCeEeHHHHHHHHHHhcC-CCHHHH---HHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCcc
Confidence            7889999999999999 444   3333332 233334   8999999999999999999999999872    3       


Q ss_pred             -CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          187 -NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       187 -~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                       ...+.++++++|+.+|.|+||.|+++||.+++...
T Consensus       141 ~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~  176 (190)
T 1g8i_A          141 EENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD  176 (190)
T ss_dssp             GGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHC
T ss_pred             ccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC
Confidence             34678899999999999999999999999999764

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.11  E-value=4.5e-11  Score=107.10  Aligned_cols=114  Identities=8%  Similarity=0.123  Sum_probs=85.8

Q ss_pred             cCCCcccceecccC------------hHHHHHHHHhhCCC--CCchh-HHHHhhhcCC--CCCChHHHHHHHHHHHhhcC
Q 008959          105 TNGPHVARISVFED------------SDADSEVFDLLDPS--SSNKI-VGKISLSCSV--EDPIETEKSFARRILSIVDY  167 (547)
Q Consensus       105 ~~~~~~~~isl~e~------------~~el~~~F~~~D~d--~dG~I-l~~ll~~l~~--~~~~~~e~~~l~~~f~~~D~  167 (547)
                      ...++.+.++..+.            +.++..+|..+|.|  ++|.| +.+++..+..  ..........++.+|+.+|.
T Consensus        19 ~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~   98 (151)
T 1w7j_B           19 FDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDK   98 (151)
T ss_dssp             HCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCT
T ss_pred             HCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCC
Confidence            34455666665443            33388899999999  99999 5444332221  01111122337889999999


Q ss_pred             CCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          168 NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       168 d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      |++|.|+.+||..++..+|..++++++..+|+.+| |++|.|+++||.+++.
T Consensus        99 d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  149 (151)
T 1w7j_B           99 EGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL  149 (151)
T ss_dssp             TSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred             CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence            99999999999999999999999999999999999 9999999999999874

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.10  E-value=2.2e-10  Score=105.00  Aligned_cols=98  Identities=22%  Similarity=0.311  Sum_probs=79.5

Q ss_pred             HHHHhhCCCCCchh-HHH---HhhhcCCCCCC--h--HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHH
Q 008959          124 EVFDLLDPSSSNKI-VGK---ISLSCSVEDPI--E--TEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE  195 (547)
Q Consensus       124 ~~F~~~D~d~dG~I-l~~---ll~~l~~~~~~--~--~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~  195 (547)
                      .+|..+|.|++|.| +.+   ++.........  .  .....++.+|+.+|.|++|.|+.+||..++..+|  ++.+++.
T Consensus        62 ~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~~~  139 (176)
T 1nya_A           62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAA  139 (176)
T ss_dssp             HHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHH
T ss_pred             HHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHHHH
Confidence            78999999999999 444   33333221221  0  1124489999999999999999999999999988  8899999


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          196 ELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      .+|+.+|.|+||.|+++||.+++.....
T Consensus       140 ~~~~~~D~d~dg~i~~~ef~~~~~~~~~  167 (176)
T 1nya_A          140 EAFNQVDTNGNGELSLDELLTAVRDFHF  167 (176)
T ss_dssp             HHHHHHCTTCSSEEEHHHHHHHHSCCSS
T ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHHHhc
Confidence            9999999999999999999999976543

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.10  E-value=1.3e-10  Score=112.91  Aligned_cols=96  Identities=22%  Similarity=0.378  Sum_probs=67.6

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCC--CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc------------C
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSV--EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF------------G  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~--~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l------------g  186 (547)
                      +..+|+.+|.|++|.| +.++...+..  .....+   .++.+|+.+|.|++|.|+.+||..++..+            +
T Consensus       104 ~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~---~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~  180 (229)
T 3dd4_A          104 AHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQE---KLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLK  180 (229)
T ss_dssp             HHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHH---HHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHH---HHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcc
Confidence            6678888888888888 4443332211  112222   37888888888888888888888888765            4


Q ss_pred             CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          187 NQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       187 ~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ...+.++++.+|+.+|.|+||.|+++||.+++..
T Consensus       181 ~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~  214 (229)
T 3dd4_A          181 EDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK  214 (229)
T ss_dssp             ---CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred             hhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence            4566678888888888888888888888888864

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.10  E-value=2.1e-10  Score=103.87  Aligned_cols=96  Identities=21%  Similarity=0.352  Sum_probs=77.2

Q ss_pred             HHHHhhCCCCCchh-HHHHhhhcCC--CCCChH----HHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          124 EVFDLLDPSSSNKI-VGKISLSCSV--EDPIET----EKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       124 ~~F~~~D~d~dG~I-l~~ll~~l~~--~~~~~~----e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      .+|..+|.|++|.| +.++...+..  ......    ....++.+|+.+|.|++|.|+.+||..++..+|  ++.+++..
T Consensus        59 ~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~  136 (166)
T 3akb_A           59 GLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQ  136 (166)
T ss_dssp             HHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHH
T ss_pred             HHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHH
Confidence            56899999999999 4444332211  011110    123489999999999999999999999999988  88999999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +|+.+|.|+||.|+++||.+++...
T Consensus       137 ~~~~~D~d~dg~i~~~ef~~~~~~~  161 (166)
T 3akb_A          137 AAAALDTDGDGKVGETEIVPAFARY  161 (166)
T ss_dssp             HHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            9999999999999999999999764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.09  E-value=1.5e-10  Score=124.68  Aligned_cols=118  Identities=17%  Similarity=0.304  Sum_probs=79.6

Q ss_pred             HHHHHHhhCCCCCchh----H----HHHhhhcCCCCCC----hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcc
Q 008959          122 DSEVFDLLDPSSSNKI----V----GKISLSCSVEDPI----ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV  189 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l----~~ll~~l~~~~~~----~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~  189 (547)
                      ++++|+.+|.|+||.|    +    ..++..++. .++    ......++.+|+.+|.|++|.|+++||..++.......
T Consensus       337 l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~  415 (484)
T 3nyv_A          337 LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQ-DASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLL  415 (484)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHHC-----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCcCCCceEeHHHHHHHHHHHhhhccc-ccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccC
Confidence            5677888888888888    3    223333333 333    11123378888888888888888888888877665556


Q ss_pred             hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          190 AANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       190 ~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ++++++.+|+.+|.|+||+|+.+||.+++...  ...+    ..+.+++...|.+++
T Consensus       416 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~--~~~~----~~~~~~~~~~D~d~d  466 (484)
T 3nyv_A          416 SRERLERAFRMFDSDNSGKISSTELATIFGVS--DVDS----ETWKSVLSEVDKNND  466 (484)
T ss_dssp             HHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT--TCCH----HHHHHHHHHHCTTCC
T ss_pred             cHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhc--CCCH----HHHHHHHHHhcCCCC
Confidence            67788888888888888888888888888652  1111    357777777775444

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.09  E-value=4.6e-10  Score=109.07  Aligned_cols=122  Identities=15%  Similarity=0.133  Sum_probs=88.2

Q ss_pred             HHHHHHhh-CCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLL-DPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +..++..| +.|++|.|    +..++..+.........   ++.+|+.+|.|++|.|+++||..++..+.....+++++.
T Consensus        66 i~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~---~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~  142 (229)
T 3dd4_A           66 LQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTY---AHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNW  142 (229)
T ss_dssp             HHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHH---HHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHH---HHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHH
Confidence            44445544 46788888    55555554332333333   889999999999999999999999988766677889999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccC--------cccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKE--------PLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~--------~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|+||+|+.+||.+++..++...        ........+.+++...|.+++
T Consensus       143 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~d  200 (229)
T 3dd4_A          143 AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKD  200 (229)
T ss_dssp             HHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCS
T ss_pred             HHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999998874210        000011346777777776554

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.09  E-value=7.4e-11  Score=127.64  Aligned_cols=119  Identities=23%  Similarity=0.336  Sum_probs=90.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCC----hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPI----ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANK  193 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~----~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee  193 (547)
                      ++++|+.+|.|+||.|    +..++..++.....    ......++.+|+.+|.|++|.|+++||..++.......+.++
T Consensus       348 l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~  427 (494)
T 3lij_A          348 LTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDK  427 (494)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHH
T ss_pred             HHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHH
Confidence            8999999999999999    44455555331110    111233999999999999999999999999876555567789


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ++.+|+.+|.|+||+|+.+||.+++..  ....+    ..+.+++...|.+++
T Consensus       428 ~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~----~~~~~~~~~~D~d~d  474 (494)
T 3lij_A          428 LESAFQKFDQDGNGKISVDELASVFGL--DHLES----KTWKEMISGIDSNND  474 (494)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCC----HHHHHHHHTTCSSSS
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCH----HHHHHHHHHhCCCCC
Confidence            999999999999999999999999865  22111    357888887776554

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.09  E-value=1e-10  Score=126.77  Aligned_cols=117  Identities=20%  Similarity=0.276  Sum_probs=91.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcC-------CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCS-------VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~-------~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      ++++|+.+|.|+||.|    +..++..+.       ...++..+   ++.+|+.+|.|+||.|+++||..++.......+
T Consensus       357 l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~  433 (504)
T 3q5i_A          357 LTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE---VDNILKEVDFDKNGYIEYSEFISVCMDKQILFS  433 (504)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHH---HHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC
T ss_pred             HHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccC
Confidence            8999999999999999    444444441       11344445   899999999999999999999999876554567


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCcc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l  247 (547)
                      +++++.+|+.+|.|+||+|+.+||.+++...+  ..+    ..+.+++...|.+++.
T Consensus       434 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~--~~~----~~~~~~~~~~D~d~dG  484 (504)
T 3q5i_A          434 EERLRRAFNLFDTDKSGKITKEELANLFGLTS--ISE----KTWNDVLGEADQNKDN  484 (504)
T ss_dssp             HHHHHHHHHHHCTTCCSEECHHHHHHHTTCSC--CCH----HHHHHHHHTTCSSCSS
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCC--CCH----HHHHHHHHHhCCCCCC
Confidence            78999999999999999999999999986521  111    3577888887765543

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.09  E-value=1.4e-10  Score=108.02  Aligned_cols=96  Identities=16%  Similarity=0.241  Sum_probs=81.4

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCC--CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVE--DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELF  198 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~--~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F  198 (547)
                      +..+|..+|.|++|.| +.+++..+...  ....++   ++.+|+.+|.|++|.|+.+||..++.  +..++++++..+|
T Consensus        89 ~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~  163 (191)
T 3khe_A           89 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRER---LLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVL  163 (191)
T ss_dssp             HHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHH---HHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHH---HHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHH
Confidence            6789999999999999 66665544321  122333   89999999999999999999999998  7778999999999


Q ss_pred             HHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          199 KAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       199 ~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      +.+|.|+||.|+++||.+++....
T Consensus       164 ~~~D~~~dg~i~~~eF~~~~~~~~  187 (191)
T 3khe_A          164 QECDKNNDGEVDFEEFVEMMQKIC  187 (191)
T ss_dssp             HHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999997754

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.09  E-value=2.8e-10  Score=104.88  Aligned_cols=107  Identities=16%  Similarity=0.218  Sum_probs=72.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhc-CC------CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSC-SV------EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l-~~------~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      ++++|..+| |++|.|    +..++..+ +.      ..++..+   ++.+|+.+|.|++|.|+++||..++..      
T Consensus         6 l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~---~~~l~~~~D~~~~g~i~~~eF~~~~~~------   75 (173)
T 1alv_A            6 FRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDT---CRSMVAVMDSDTTGKLGFEEFKYLWNN------   75 (173)
T ss_dssp             HHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHH------
T ss_pred             HHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHH---HHHHHHHHcCCCCCccCHHHHHHHHHH------
Confidence            777888888 888887    55555554 21      1344444   777888888888888888888877753      


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                      .++++.+|+.+|.|++|.|+.+||.+++..++.....    ..+..++...|
T Consensus        76 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~----~~~~~~~~~~d  123 (173)
T 1alv_A           76 IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE----HLYSMIIRRYS  123 (173)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCH----HHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCH----HHHHHHHHHhc
Confidence            3567778888888888888888888888777654332    23455554444

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.09  E-value=2e-10  Score=123.67  Aligned_cols=98  Identities=19%  Similarity=0.284  Sum_probs=82.1

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      +..+|+.+|.|++|.| +.+++..+... ......+.++.+|+.+|.|+||.|+.+||..++..  ..+++++++++|+.
T Consensus       384 ~~~~~~~~D~d~~g~i~~~Ef~~~~~~~-~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~~  460 (484)
T 3nyv_A          384 VDQVLDAVDFDKNGYIEYSEFVTVAMDR-KTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSE  460 (484)
T ss_dssp             HHHHHHHHTCCTTSEEEHHHHHHHHHHH-HHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHhc-cccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHH
Confidence            7889999999999999 77766554321 11222345899999999999999999999999987  45788999999999


Q ss_pred             hcCCCCCCcCHHHHHHHHHhhh
Q 008959          201 ADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      +|.|+||.|+++||.++|.++.
T Consensus       461 ~D~d~dG~i~~~Ef~~~~~~~~  482 (484)
T 3nyv_A          461 VDKNNDGEVDFDEFQQMLLKLC  482 (484)
T ss_dssp             HCTTCCSEEEHHHHHHHHHHTT
T ss_pred             hcCCCCCcCCHHHHHHHHHhhh
Confidence            9999999999999999997753

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.09  E-value=2.6e-10  Score=106.50  Aligned_cols=95  Identities=21%  Similarity=0.356  Sum_probs=76.3

Q ss_pred             HHHHHHhhCCCCCchh-HHH---HhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----C--Ccc--
Q 008959          122 DSEVFDLLDPSSSNKI-VGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----G--NQV--  189 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~---ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g--~~~--  189 (547)
                      +..+|..+|.|++|.| +.+   ++..+.. .....+   ++.+|+.+|.|++|.|+++||..++..+    |  ..+  
T Consensus        65 ~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~---~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~  140 (193)
T 1bjf_A           65 AEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQK---LKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPE  140 (193)
T ss_dssp             HHHHHHHHCSSCSSEEEHHHHHHHHHHHTS-SCHHHH---HHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCG
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHcC-CCHHHH---HHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCc
Confidence            7889999999999999 444   4443432 333344   8999999999999999999999999763    4  122  


Q ss_pred             ----hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          190 ----AANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       190 ----~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                          ..+.+.++|+.+|.|+||.|+++||.+++..
T Consensus       141 ~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  175 (193)
T 1bjf_A          141 DESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS  175 (193)
T ss_dssp             GGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence                2356999999999999999999999999964

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.09  E-value=1.4e-11  Score=104.91  Aligned_cols=96  Identities=17%  Similarity=0.330  Sum_probs=81.1

Q ss_pred             hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKK  194 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel  194 (547)
                      +.++..+|..+|  ++|.| +.+++..+........+   ++.+|+.+|.|++|.|+.+||..++..+   |..++.+++
T Consensus         8 ~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~~~~~~~---l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~   82 (108)
T 2kyc_A            8 PSDIAAALRDCQ--APDSFSPKKFFQISGMSKKSSSQ---LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASET   82 (108)
T ss_dssp             HHHHHHHHTTSC--STTTCCHHHHHHHHTCTTCCSSS---HHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTT
T ss_pred             HHHHHHHHHHcC--CCCcCCHHHHHHHHhhCcccHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHH
Confidence            445889999998  88888 77766555432223334   8999999999999999999999999998   778899999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          195 EELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +.+|+.+|.|++|.|+++||.+++.
T Consensus        83 ~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           83 KTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             HHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            9999999999999999999999874

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.08  E-value=1.7e-10  Score=107.00  Aligned_cols=96  Identities=21%  Similarity=0.376  Sum_probs=76.3

Q ss_pred             HHHHHHHhhCCCCCchh-HHHH---hhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----CCc----
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKI---SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----GNQ----  188 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~l---l~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g~~----  188 (547)
                      ++..+|..+|.|++|.| +.++   +..+.. .....+   ++.+|+.+|.|++|.|+++||..++..+    |..    
T Consensus        57 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~---~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~  132 (183)
T 1s6c_A           57 YAHYLFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEK---LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV  132 (183)
T ss_dssp             HHHHHHHHHCTTCSSCEEHHHHHHHHHHHHH-CCHHHH---HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC------
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHHHHcC-CCHHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcC
Confidence            38899999999999999 4443   333322 233334   8999999999999999999999999876    532    


Q ss_pred             ch----HHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          189 VA----ANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       189 ~~----~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++    .+++.++|+.+|.|+||.|+++||.+++..
T Consensus       133 ~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~  168 (183)
T 1s6c_A          133 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE  168 (183)
T ss_dssp             -----CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred             ccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            33    378999999999999999999999998854

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.08  E-value=6.1e-10  Score=105.59  Aligned_cols=63  Identities=19%  Similarity=0.387  Sum_probs=31.8

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHH----hcCCcchHHHH----HHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLIS----AFGNQVAANKK----EELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~----~lg~~~~~eel----~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.+|.|++|.|+.+||..++.    ..|..++++++    +.+|+.+|.|+||.|+++||.+++..
T Consensus       113 l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  183 (207)
T 2ehb_A          113 VKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL  183 (207)
T ss_dssp             HHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            55555555555555555555555553    23444444433    23334555555555555555555544

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.08  E-value=4.6e-10  Score=106.46  Aligned_cols=97  Identities=24%  Similarity=0.339  Sum_probs=77.2

Q ss_pred             HHHHHHhhCCC--CCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-cchHHHHHHH
Q 008959          122 DSEVFDLLDPS--SSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-QVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d--~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~~~eel~~~  197 (547)
                      +.++|..+|.|  ++|.| ..++...+.. .+...+ ..+..+|+.+|.|++|.|+++||..++..+.. ....++++.+
T Consensus        39 l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~-~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~  116 (207)
T 2ehb_A           39 LYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRN-LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFA  116 (207)
T ss_dssp             HHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCC-HHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHH
T ss_pred             HHHHHHHhccccCCCCccCHHHHHHHHhc-cccccH-HHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHH
Confidence            88999999999  99999 4443333221 122111 12788999999999999999999999988653 3567789999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHh
Q 008959          198 FKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      |+.+|.|++|+|+.+||.+++..
T Consensus       117 F~~~D~d~~G~I~~~E~~~~l~~  139 (207)
T 2ehb_A          117 FKLYDLRQTGFIEREELKEMVVA  139 (207)
T ss_dssp             HHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHhCCCCCCcCcHHHHHHHHHH
Confidence            99999999999999999999963

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.08  E-value=1.3e-10  Score=111.91  Aligned_cols=62  Identities=19%  Similarity=0.526  Sum_probs=33.9

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCC-----cchHHHHHH----HHHHhcCCCCCCcCHHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGN-----QVAANKKEE----LFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-----~~~~eel~~----~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      ++.+|+.+|.|++|.|+.+||..++..++.     .++++++++    +|+.+|.|+||.|+++||.+++.
T Consensus       131 l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  201 (214)
T 2l4h_A          131 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS  201 (214)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            555555555555556666555555555432     344444432    55555555555566665555554

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.08  E-value=7.9e-11  Score=114.26  Aligned_cols=121  Identities=16%  Similarity=0.174  Sum_probs=84.6

Q ss_pred             HHHHHHhhCCCCCchh----HHH-HhhhcCCCCCChHH-HHHHHHHHHhh-----cCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGK-ISLSCSVEDPIETE-KSFARRILSIV-----DYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~-ll~~l~~~~~~~~e-~~~l~~~f~~~-----D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      ++++|..+|.|++|.|    +.. ++..++. .++..+ ...+..+|..+     |.|++|.|+++||..++..+.....
T Consensus        53 l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~-~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~  131 (226)
T 2lvv_A           53 RIELFKQFDTNGTGKLGFREVLDGCYGILKL-DEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYIYD  131 (226)
T ss_dssp             HHHHHHHHGGGSCSCBCSHHHHHHHHHTTCC-TTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhccC
Confidence            8999999999999999    555 4444444 333333 23345555555     9999999999999996543333334


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .+++..+|+.+|.|++|+|+.+||.+++..++..-....   .+.+++...|.+++
T Consensus       132 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~---e~~~~~~~~D~d~d  184 (226)
T 2lvv_A          132 IFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDIT---DATTVFNEIDTNGS  184 (226)
T ss_dssp             HHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCC---SCHHHHHHHCCSCS
T ss_pred             HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHH---HHHHHHHHhCCCCC
Confidence            568999999999999999999999999988732111111   25566666665444

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.07  E-value=2.6e-10  Score=112.71  Aligned_cols=124  Identities=15%  Similarity=0.149  Sum_probs=94.9

Q ss_pred             HHHHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHH
Q 008959          120 DADSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK  194 (547)
Q Consensus       120 ~el~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel  194 (547)
                      .++..+|..||.+ ++|.|    +..++..++.......+   ++.+|+.+|.|++|.|+++||..++..++...+.+++
T Consensus        91 ~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~---~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l  167 (256)
T 2jul_A           91 KELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTY---AHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKL  167 (256)
T ss_dssp             HHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHH---HHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHHH
T ss_pred             HHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHH---HHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHHH
Confidence            4478888888775 79988    66666666543444555   8999999999999999999999999988777888999


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhhhc----cC-c---ccccchhHHHHHhhhcccCc
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQQE----KE-P---LMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~----~~-~---~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.+|+.+|.|++|+|+++||..++..+..    .. +   +......+.+++...|.+++
T Consensus       168 ~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d  227 (256)
T 2jul_A          168 KWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQD  227 (256)
T ss_dssp             HHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTT
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCC
Confidence            99999999999999999999999988731    10 0   00011346667777765544

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.07  E-value=5.9e-11  Score=128.09  Aligned_cols=121  Identities=20%  Similarity=0.279  Sum_probs=71.2

Q ss_pred             HHHHHHHhhCCCCCchh----H----HHHhhhcCCCCCC-------hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          121 ADSEVFDLLDPSSSNKI----V----GKISLSCSVEDPI-------ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l----~~ll~~l~~~~~~-------~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +++++|+.+|.|+||.|    +    ..++..++. .++       ......+..+|+.+|.|++|.|+++||..++...
T Consensus       332 ~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~  410 (486)
T 3mwu_A          332 QLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGV-DSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDR  410 (486)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTC-CGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCT
T ss_pred             HHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcc-cchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhh
Confidence            36678888888888888    2    223333333 222       0112338888888888888888888888877665


Q ss_pred             CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          186 GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       186 g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ....+.++++.+|+.+|.|+||.|+.+||.+++...+....+    ..+.+++...|.+++
T Consensus       411 ~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~----~~~~~~~~~~D~d~d  467 (486)
T 3mwu_A          411 TILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQM----EELESIIEQVDNNKD  467 (486)
T ss_dssp             TTTCCHHHHHHHHHHHCSSCSSSBCSSCC------------------------CCCCSSCS
T ss_pred             hccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCH----HHHHHHHHHhCCCCC
Confidence            555677788888888888888888888888888887655433    346667776665443

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.07  E-value=1.1e-10  Score=125.90  Aligned_cols=97  Identities=23%  Similarity=0.291  Sum_probs=65.3

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCC--CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVE--DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELF  198 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~--~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F  198 (547)
                      +..+|..+|.|++|.| +.+++..+...  ....++   ++.+|+.+|.|+||.|+.+||..++..+|..+++++++++|
T Consensus       383 ~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~---~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~  459 (486)
T 3mwu_A          383 IDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRER---MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESII  459 (486)
T ss_dssp             HHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHH---HHHHHHHHCSSCSSSBCSSCC--------------------
T ss_pred             HHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHH---HHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence            7889999999999999 77776655432  222333   89999999999999999999999999999889999999999


Q ss_pred             HHhcCCCCCCcCHHHHHHHHHhh
Q 008959          199 KAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       199 ~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.+|.|+||.|+++||.+++...
T Consensus       460 ~~~D~d~dG~I~~~EF~~~~~~~  482 (486)
T 3mwu_A          460 EQVDNNKDGEVDFNEFVEMLQNF  482 (486)
T ss_dssp             CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHhCCCCCCcEeHHHHHHHHHHh
Confidence            99999999999999999999764

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.07  E-value=4.8e-10  Score=108.44  Aligned_cols=97  Identities=22%  Similarity=0.344  Sum_probs=77.3

Q ss_pred             HHHHHHhhCCC--CCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC-CcchHHHHHHH
Q 008959          122 DSEVFDLLDPS--SSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG-NQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d--~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-~~~~~eel~~~  197 (547)
                      +.++|..+|.|  ++|.| ..++...+.. .+...+ ..++.+|+.+|.|++|.|+++||..++..+. .....++++.+
T Consensus        50 l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~-~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~  127 (226)
T 2zfd_A           50 LYELFKKISSAVIDDGLINKEEFQLALFK-TNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFS  127 (226)
T ss_dssp             HHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHH
T ss_pred             HHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccH-HHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHH
Confidence            88999999999  99999 4443333221 222211 1277899999999999999999999998865 34567789999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHh
Q 008959          198 FKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      |+.+|.|++|+|+.+||.+++..
T Consensus       128 F~~~D~d~~G~Is~~E~~~~l~~  150 (226)
T 2zfd_A          128 FQLYDLKQQGFIERQEVKQMVVA  150 (226)
T ss_dssp             HHHHCTTSSSSEEHHHHHHHHHH
T ss_pred             HHHhCCCCCCcccHHHHHHHHHH
Confidence            99999999999999999999963

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.07  E-value=2.3e-10  Score=108.52  Aligned_cols=96  Identities=16%  Similarity=0.204  Sum_probs=79.1

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----C----Cc
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----G----NQ  188 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g----~~  188 (547)
                      ++..+|..+|.|++|.|    +..++..+.. ....++   ++.+|+.+|.|++|.|+++||..++..+    |    ..
T Consensus        72 ~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~-~~~~~~---~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~  147 (207)
T 2d8n_A           72 YAQHVFRSFDSNLDGTLDFKEYVIALHMTTA-GKTNQK---LEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKL  147 (207)
T ss_dssp             HHHHHHHHHCTTCCSEEEHHHHHHHHHHHSC-SSSSTT---HHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHT
T ss_pred             HHHHHHHHhcCCCCCeEeHHHHHHHHHHHcC-CCHHHH---HHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCC
Confidence            38899999999999999    4444444433 334445   8899999999999999999999999875    6    33


Q ss_pred             ch------HHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          189 VA------ANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       189 ~~------~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++      .+++..+|+.+|.|+||.|+++||.+++..
T Consensus       148 l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  185 (207)
T 2d8n_A          148 LPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA  185 (207)
T ss_dssp             SCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHh
Confidence            33      467999999999999999999999999975

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.07  E-value=2.1e-10  Score=107.20  Aligned_cols=101  Identities=15%  Similarity=0.144  Sum_probs=76.1

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCC---------CCChHH-HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVE---------DPIETE-KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~---------~~~~~e-~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      +..+|..+|.|++|.| +.+++..+...         ....+. ...++.+|+.+|.|++|.|+.+||..++..+|..++
T Consensus        68 ~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~  147 (195)
T 1qv0_A           68 VEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPS  147 (195)
T ss_dssp             HHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCC
Confidence            5668999999999999 54443322110         001111 122348999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ++++.++|+.+|.|+||.|+++||.+++....
T Consensus       148 ~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~  179 (195)
T 1qv0_A          148 QEDCEATFRHCDLDNAGDLDVDEMTRQHLGFW  179 (195)
T ss_dssp             HHHHHHHHHHSCCCTTSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHc
Confidence            99999999999999999999999999997753

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.07  E-value=3.8e-10  Score=111.46  Aligned_cols=95  Identities=20%  Similarity=0.332  Sum_probs=79.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----C-------
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----G-------  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g-------  186 (547)
                      +..+|+.+|.|++|.|    +..++..+.. ....++   ++.+|+.+|.|++|.|+++||..++..+    |       
T Consensus       131 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~-~~~~~~---l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~  206 (256)
T 2jul_A          131 AHFLFNAFDADGNGAIHFEDFVVGLSILLR-GTVHEK---LKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPIL  206 (256)
T ss_dssp             HHHHHHHSSCSCCSEECSHHHHHHHHHHHS-CCHHHH---HHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCS
T ss_pred             HHHHHHHhccCCCCcCcHHHHHHHHHHHhc-cChHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCccc
Confidence            8889999999999999    4444444432 333444   8999999999999999999999999875    4       


Q ss_pred             -CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          187 -NQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       187 -~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                       ...+.+++.++|+.+|.|+||.|+++||.+++..
T Consensus       207 ~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~  241 (256)
T 2jul_A          207 REDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK  241 (256)
T ss_dssp             CCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence             3457889999999999999999999999999976

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.07  E-value=3.8e-10  Score=106.63  Aligned_cols=106  Identities=16%  Similarity=0.188  Sum_probs=75.8

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCC----CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVE----DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANK  193 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~----~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee  193 (547)
                      +++ |..+|.|++|.|    +..++..++..    .++..+   ++.+|+.+|.|++|.|+++||..++...      ++
T Consensus        35 l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~---~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~  104 (198)
T 1juo_A           35 LYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLET---CRLMVSMLDRDMSGTMGFNEFKELWAVL------NG  104 (198)
T ss_dssp             THH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHH---HHHHHHHHCTTCSSCEEHHHHHHHHHHH------HH
T ss_pred             HHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHH---HHHHHHHhCCCCCCeECHHHHHHHHHHH------HH
Confidence            667 888888888888    55566665531    345555   7888888888888888888888877542      57


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhh
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVA  241 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~  241 (547)
                      ++.+|+.+|.|++|.|+.+||.+++..++.....    ..+.+++...
T Consensus       105 ~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~l~~~~  148 (198)
T 1juo_A          105 WRQHFISFDTDRSGTVDPQELQKALTTMGFRLSP----QAVNSIAKRY  148 (198)
T ss_dssp             HHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCH----HHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCH----HHHHHHHHHh
Confidence            8888888888888888888888888777654332    2345555444

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.06  E-value=5.7e-10  Score=102.15  Aligned_cols=116  Identities=15%  Similarity=0.192  Sum_probs=87.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcC----CCCCChHH-H-----HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCS----VEDPIETE-K-----SFARRILSIVDYNQDGQLSFKEFSDLISAFGN  187 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~----~~~~~~~e-~-----~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~  187 (547)
                      ++++|..+|.|++|.|    +..++..++    . .++..+ .     ..|+.+|+.+|  ++|.|+++||..++.....
T Consensus         8 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~~   84 (174)
T 1q80_A            8 MKTYFNRIDFDKDGAITRMDFESMAERFAKESEM-KAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMVK   84 (174)
T ss_dssp             HHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSC-CTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHcC
Confidence            8899999999999999    555555554    3 444433 1     12467888899  9999999999999887543


Q ss_pred             -----cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          188 -----QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       188 -----~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                           ....+.++.+|+.+|.|++|+|+.+||.+++...+  ...    ..+..++...|.+++
T Consensus        85 ~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~~----~~~~~~~~~~D~d~d  142 (174)
T 1q80_A           85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDK----TMAPASFDAIDTNND  142 (174)
T ss_dssp             STTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CCG----GGHHHHHHHHCTTCS
T ss_pred             cccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CCH----HHHHHHHHHhCCCCC
Confidence                 23357799999999999999999999999998885  222    246677776665443

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.06  E-value=5.5e-10  Score=106.30  Aligned_cols=116  Identities=9%  Similarity=0.128  Sum_probs=81.1

Q ss_pred             CCCCchhhHHHHH-hcCCCcccceecccChHH--------HHHHHHhhCCCCCchh-HHHHhhhcCCCCC--Ch------
Q 008959           91 DKPIWNSEKKLLL-ETNGPHVARISVFEDSDA--------DSEVFDLLDPSSSNKI-VGKISLSCSVEDP--IE------  152 (547)
Q Consensus        91 LnP~Wne~~kll~-e~~~~~~~~isl~e~~~e--------l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~--~~------  152 (547)
                      +.+..-...+.+| ..+.++.+.++..|+...        ..++|..+|.|++|.| +.+++..+.....  ..      
T Consensus        23 ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~~lg~~~~~~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~  102 (208)
T 2ct9_A           23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDV  102 (208)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCHHHHTSTTHHHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--------
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHcCCCCcHHHHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhccc
Confidence            4444433333333 444566777776665321        4678999999999999 6555444332111  11      


Q ss_pred             -------HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHHH----HHHhcCCCC
Q 008959          153 -------TEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEEL----FKAADKNGD  206 (547)
Q Consensus       153 -------~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~~----F~~~D~d~d  206 (547)
                             .....++.+|+.+|.|++|.|+.+||..++..+ |..++++++..+    |+.+|.|+|
T Consensus       103 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~d  168 (208)
T 2ct9_A          103 NGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGD  168 (208)
T ss_dssp             ---CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSS
T ss_pred             ccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence                   133458999999999999999999999999985 888999999999    888888765

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.05  E-value=1.5e-10  Score=125.13  Aligned_cols=97  Identities=13%  Similarity=0.218  Sum_probs=81.2

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCC--CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVE--DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELF  198 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~--~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F  198 (547)
                      +..+|+.+|.|++|.| +.+++..+...  ....++   ++.+|+.+|.|+||.|+.+||..++..  ..+++++++++|
T Consensus       392 ~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~  466 (494)
T 3lij_A          392 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDK---LESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMI  466 (494)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHH---HHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHH---HHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHH
Confidence            8889999999999999 66665554321  122333   899999999999999999999999875  557888999999


Q ss_pred             HHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          199 KAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       199 ~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      +.+|.|+||.|+++||.++|.+++.
T Consensus       467 ~~~D~d~dG~I~~~EF~~~~~~~~~  491 (494)
T 3lij_A          467 SGIDSNNDGDVDFEEFCKMIQKLCS  491 (494)
T ss_dssp             HTTCSSSSSSEEHHHHHHHHHHHSS
T ss_pred             HHhCCCCCCcCCHHHHHHHHHhhcc
Confidence            9999999999999999999988754

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.05  E-value=4.3e-10  Score=89.33  Aligned_cols=69  Identities=22%  Similarity=0.443  Sum_probs=63.8

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +++...++.+|+.+|.|++|.|+.+||..++..+|..++.+++..+|+.+|.|++|.|+++||..++..
T Consensus         3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            444556999999999999999999999999999999999999999999999999999999999998855

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.04  E-value=8.2e-10  Score=106.80  Aligned_cols=99  Identities=19%  Similarity=0.331  Sum_probs=78.4

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhh---hcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH----hcCCcchHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISL---SCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS----AFGNQVAANK  193 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~---~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~----~lg~~~~~ee  193 (547)
                      +..+|..+|.|++|.| +.++..   .+.......+   .++.+|+.+|.|++|.|+.+||..++.    .+|..+++++
T Consensus        87 ~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~---~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~  163 (226)
T 2zfd_A           87 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDD---KIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTV  163 (226)
T ss_dssp             HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHH---HHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred             HHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHH---HHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHH
Confidence            6779999999999999 555443   3322122233   399999999999999999999999996    4677777776


Q ss_pred             H----HHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          194 K----EELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       194 l----~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      +    +.+|+.+|.|+||.|+++||.+++...+.
T Consensus       164 ~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~  197 (226)
T 2zfd_A          164 IEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS  197 (226)
T ss_dssp             HHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChH
Confidence            5    45567999999999999999999977543

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.04  E-value=5.4e-10  Score=108.28  Aligned_cols=96  Identities=21%  Similarity=0.379  Sum_probs=78.0

Q ss_pred             HHHHHHhhCCCCCchh-HHHH---hhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----CCc-----
Q 008959          122 DSEVFDLLDPSSSNKI-VGKI---SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----GNQ-----  188 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~l---l~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g~~-----  188 (547)
                      +..+|+.+|.|++|.| +.++   +..+.. ....++   ++.+|+.+|.|++|.|+++||..++..+    |..     
T Consensus        91 ~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~-~~~~~~---l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~  166 (224)
T 1s1e_A           91 AHYLFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEK---LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVL  166 (224)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHHH-CCHHHH---HHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGG
T ss_pred             HHHHHHHhcCCCCCcEeHHHHHHHHHHHcc-CCHHHH---HHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCC
Confidence            7899999999999999 4443   333322 233333   8999999999999999999999999875    532     


Q ss_pred             ---chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          189 ---VAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       189 ---~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                         .+.+++.++|+.+|.|+||.|+++||.+++...
T Consensus       167 ~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~  202 (224)
T 1s1e_A          167 KEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED  202 (224)
T ss_dssp             CSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTC
T ss_pred             CHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence               245889999999999999999999999999664

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.04  E-value=2.2e-10  Score=105.72  Aligned_cols=96  Identities=10%  Similarity=0.120  Sum_probs=76.1

Q ss_pred             HHHHhhCCCCCchh-HHHH---hhhcCCC-----CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHH
Q 008959          124 EVFDLLDPSSSNKI-VGKI---SLSCSVE-----DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK  194 (547)
Q Consensus       124 ~~F~~~D~d~dG~I-l~~l---l~~l~~~-----~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel  194 (547)
                      .+|..+|.|++|.| +.++   +......     .........++.+|+.+|.|++|.|+.+||..++..+|  ++.+++
T Consensus        64 ~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~~~~~  141 (185)
T 2sas_A           64 DLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADV  141 (185)
T ss_dssp             HHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSH
T ss_pred             HHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CCHHHH
Confidence            34999999999999 4433   2222110     01111224489999999999999999999999998887  678899


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .++|+.+|.|+||.|+++||.+++...
T Consensus       142 ~~~~~~~D~d~dG~i~~~ef~~~~~~~  168 (185)
T 2sas_A          142 PAVYNVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            999999999999999999999999775

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.04  E-value=8.2e-10  Score=101.74  Aligned_cols=109  Identities=13%  Similarity=0.169  Sum_probs=89.4

Q ss_pred             HHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHH
Q 008959          120 DADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELF  198 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F  198 (547)
                      .++..+|..+|.|++|.| +.++...+..       ...++.+|+.+|.|++|.|+.+||..++..+|..++.+++..+|
T Consensus        47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~  119 (173)
T 1alv_A           47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII  119 (173)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCccCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence            348889999999999999 6666554321       13389999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          199 KAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       199 ~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.+| |++|.|+++||..++...          ..+.+++...|.+++
T Consensus       120 ~~~d-d~dg~i~~~eF~~~~~~~----------~~~~~~F~~~D~d~~  156 (173)
T 1alv_A          120 RRYS-DEGGNMDFDNFISCLVRL----------DAMFRAFKSLDKDGT  156 (173)
T ss_dssp             HHHT-CSSSCBCHHHHHHHHHHH----------HHHHHHHHHHSSSCC
T ss_pred             HHhc-CCCCcCcHHHHHHHHHHH----------HHHHHHHHHhCCCCC
Confidence            9999 999999999999999763          235555555565444

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.04  E-value=2.1e-10  Score=112.32  Aligned_cols=106  Identities=10%  Similarity=0.121  Sum_probs=83.3

Q ss_pred             cccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCCh---HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-
Q 008959          115 VFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIE---TEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-  185 (547)
Q Consensus       115 l~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~---~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-  185 (547)
                      +.+.+.+ ++++|..+|.|++|.|    +..++..++. .++.   .....+..+|+.+|.|++|.|+++||..++... 
T Consensus        10 l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~-~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~   88 (263)
T 2f33_A           10 SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQ-ARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEE   88 (263)
T ss_dssp             TSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHH-HHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCT
T ss_pred             cCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHh-hcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhh
Confidence            3444444 9999999999999999    6666665543 1111   001238899999999999999999999997543 


Q ss_pred             --------CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          186 --------GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       186 --------g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                              ....+.++++.+|+.+|.|++|.|+.+||..++..+
T Consensus        89 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~  132 (263)
T 2f33_A           89 NFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDL  132 (263)
T ss_dssp             THHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHH
T ss_pred             hHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHH
Confidence                    334567789999999999999999999999999887

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.04  E-value=5e-10  Score=86.21  Aligned_cols=63  Identities=29%  Similarity=0.545  Sum_probs=60.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.+|.|++|.|+.+||..++..++...+.+++..+|+.+|.|++|.|+++||.+++..
T Consensus         3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            788999999999999999999999999999999999999999999999999999999998864

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.04  E-value=4.3e-10  Score=104.53  Aligned_cols=95  Identities=24%  Similarity=0.383  Sum_probs=57.5

Q ss_pred             HHHHHHhhCC-----CC-C--chh-HHHH--hhhcCCCCCChHHHHHHHHHHHhhcCCCCCc-ccHHHHHHHHHhcCC-c
Q 008959          122 DSEVFDLLDP-----SS-S--NKI-VGKI--SLSCSVEDPIETEKSFARRILSIVDYNQDGQ-LSFKEFSDLISAFGN-Q  188 (547)
Q Consensus       122 l~~~F~~~D~-----d~-d--G~I-l~~l--l~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~-Is~~Ef~~~l~~lg~-~  188 (547)
                      +.++|..+|.     |+ +  |.| ..++  +..++. .++.      ..+|+.+|.|++|. |+++||..++..+.. .
T Consensus        22 l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~l~~~g~-~~~~------~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~   94 (183)
T 1dgu_A           22 AHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKA-NPFK------ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTA   94 (183)
T ss_dssp             HHHHHHHHSCSTTCSSCCCTTTCSCHHHHHTSTTSSS-CTTH------HHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTC
T ss_pred             HHHHHHHhCccccccccccccCcCcHHHHHHHHhhhc-CcHH------HHHHHHhCCCCCCCEecHHHHHHHHHHhcCCC
Confidence            7777777777     56 6  766 2222  333332 2221      24566667777777 777777776665433 2


Q ss_pred             chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          189 VAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       189 ~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      ...++++.+|+.+|.|++|+|+.+||..++..++.
T Consensus        95 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~  129 (183)
T 1dgu_A           95 TPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG  129 (183)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhc
Confidence            34456777777777777777777777777766654

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.04  E-value=1.2e-10  Score=109.56  Aligned_cols=112  Identities=19%  Similarity=0.268  Sum_probs=87.3

Q ss_pred             cCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCC--CCChHHHHHHHHHHHhhcCCC
Q 008959          105 TNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVE--DPIETEKSFARRILSIVDYNQ  169 (547)
Q Consensus       105 ~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~--~~~~~e~~~l~~~f~~~D~d~  169 (547)
                      ...++.+.++..|+            +.++..+|..+|.|++|.| +.+++..+...  ......   ++.+|+.+|.|+
T Consensus        19 ~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~---l~~~F~~~D~d~   95 (188)
T 1s6i_A           19 IDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREEN---LVSAFSYFDKDG   95 (188)
T ss_dssp             TSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCS---THHHHHHTTTTC
T ss_pred             HCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHH---HHHHHHHHCCCC
Confidence            34445666664433            2338899999999999999 66555433221  112233   889999999999


Q ss_pred             CCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          170 DGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       170 dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +|.|+.+||..++..+|  ++++++..+|+.+|.|+||.|+++||.+++...
T Consensus        96 dG~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~  145 (188)
T 1s6i_A           96 SGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR  145 (188)
T ss_dssp             SSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred             CCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHc
Confidence            99999999999998887  677899999999999999999999999998653

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.04  E-value=2.3e-10  Score=104.11  Aligned_cols=97  Identities=18%  Similarity=0.264  Sum_probs=72.7

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK  199 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~  199 (547)
                      ++..+|..+|.|++|.| +.+++..+.... .......++.+|+.+|.|++|.|+.+||..++..+|  ++++++..+|+
T Consensus        64 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--~~~~~~~~~~~  140 (166)
T 2aao_A           64 EILDLMQAADVDNSGTIDYKEFIAATLHLN-KIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMR  140 (166)
T ss_dssp             HHHHHHHHHCTTCCSSBCHHHHHHHHTTCH-HHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC----------CCHHH
T ss_pred             HHHHHHHHhCCCCCCeEcHHHHHHHHHHHh-hcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHH
Confidence            38899999999999999 666655443211 111123489999999999999999999999998776  66888999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHHh
Q 008959          200 AADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+|.|++|.|+++||.+++..
T Consensus       141 ~~d~~~dg~i~~~eF~~~~~~  161 (166)
T 2aao_A          141 DVDQDNDGRIDYNEFVAMMQK  161 (166)
T ss_dssp             HHCTTCSSSBCHHHHHHHHC-
T ss_pred             HhCCCCCCcEeHHHHHHHHHh
Confidence            999999999999999999854

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.04  E-value=1e-09  Score=102.42  Aligned_cols=115  Identities=14%  Similarity=0.113  Sum_probs=89.7

Q ss_pred             CCCchhhHHHHHhcCCCcccceecccCh------HHHHHHHHhhCCCCCchh----HHHHhhhc----CCCCCChHHHHH
Q 008959           92 KPIWNSEKKLLLETNGPHVARISVFEDS------DADSEVFDLLDPSSSNKI----VGKISLSC----SVEDPIETEKSF  157 (547)
Q Consensus        92 nP~Wne~~kll~e~~~~~~~~isl~e~~------~el~~~F~~~D~d~dG~I----l~~ll~~l----~~~~~~~~e~~~  157 (547)
                      +|...+..+++-....++.+.+++.|..      .+++.+|+.|| |++|.|    +..++..+    +. .+++++   
T Consensus        42 ~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~-~~~~~~---  116 (174)
T 2i7a_A           42 MFSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGI-FISREL---  116 (174)
T ss_dssp             CCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTC-CCCHHH---
T ss_pred             CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCC-CCCHHH---
Confidence            4444444455555666677888876652      22789999999 999999    66677666    54 566666   


Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCC-CcCHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG-VVSVDELAALL  218 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG-~Is~~Ef~~~l  218 (547)
                      ++.+++.+| |++|.|+++||..++..+      +++.++|+.+|+|++| .++++||.+++
T Consensus       117 ~~~l~~~~d-d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~GI~~~~~Ef~~~~  171 (174)
T 2i7a_A          117 LHLVTLRYS-DSVGRVSFPSLVCFLMRL------EAMAKTFRNLSKDGKGLYLTEMEWMSLV  171 (174)
T ss_dssp             HHHHHHHHS-CTTSEECHHHHHHHHHHH------HHHHHHHHHHCSSSSCCCCCHHHHHHHH
T ss_pred             HHHHHHHHc-CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCceecHHHHHHHH
Confidence            899999999 999999999999998653      5799999999999999 34899998875

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.03  E-value=6.8e-10  Score=118.30  Aligned_cols=116  Identities=16%  Similarity=0.269  Sum_probs=90.6

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQD  170 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~d  170 (547)
                      ..+.++.+.++..|+            ..++..+|+.+|.|++|.| +.+++..+..........+.++.+|+.+|.|++
T Consensus       320 ~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~d  399 (450)
T 3sg6_A          320 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN  399 (450)
T ss_dssp             HHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCS
T ss_pred             HHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCC
Confidence            344556777776554            2237889999999999999 555544332111111112238999999999999


Q ss_pred             CcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          171 GQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       171 G~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      |.|+.+||..++..+|..+++++++.+|..+|.|+||.|+++||.++|.
T Consensus       400 G~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~  448 (450)
T 3sg6_A          400 GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT  448 (450)
T ss_dssp             SEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred             CeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999884

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.03  E-value=7.3e-10  Score=90.15  Aligned_cols=72  Identities=25%  Similarity=0.457  Sum_probs=65.4

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      .++++...++.+|+.+|.|++|.|+.+||..++..+| ..+.+++..+|+.+|.|++|.|+++||..++....
T Consensus         5 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~   76 (86)
T 2opo_A            5 DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR   76 (86)
T ss_dssp             -CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred             CCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc
Confidence            3455566799999999999999999999999999999 89999999999999999999999999999997653

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.02  E-value=1.2e-10  Score=105.08  Aligned_cols=97  Identities=15%  Similarity=0.150  Sum_probs=50.7

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCC--C--CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC--------Cc
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVE--D--PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG--------NQ  188 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~--~--~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg--------~~  188 (547)
                      ....|+.+|.|++|.| +.++...+...  .  ......+.++.+|+.+|.|++|.|+++||..++..++        ..
T Consensus        29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~  108 (143)
T 3a4u_B           29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL  108 (143)
T ss_dssp             ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred             CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence            5678999999999999 55544333210  0  0111123488999999999999999999999998763        45


Q ss_pred             chHHHHHH----HHHHhcCCCCCCcCHHHHHHHH
Q 008959          189 VAANKKEE----LFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       189 ~~~eel~~----~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      ++.+++.+    +|+.+|.|+||.|+++||..++
T Consensus       109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            77777744    5599999999999999998876

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.02  E-value=1.8e-09  Score=98.48  Aligned_cols=93  Identities=14%  Similarity=0.203  Sum_probs=81.1

Q ss_pred             HHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHH
Q 008959          120 DADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELF  198 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F  198 (547)
                      .++..+|..+|.|++|.| +.+++..+..    .   ..++.+|+.+|.|++|.|+.+||..++..+|..++++++..+|
T Consensus        40 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~----~---~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~  112 (165)
T 1k94_A           40 ETCRIMIAMLDRDHTGKMGFNAFKELWAA----L---NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIV  112 (165)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHH----H---HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHH----H---HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHH
Confidence            348899999999999999 6666554321    1   3389999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCcCHHHHHHHHHhh
Q 008959          199 KAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       199 ~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.+  |++|.|+++||.+++...
T Consensus       113 ~~~--d~dg~i~~~eF~~~~~~~  133 (165)
T 1k94_A          113 KRY--SKNGRIFFDDYVACCVKL  133 (165)
T ss_dssp             HHH--CBTTBCBHHHHHHHHHHH
T ss_pred             HHh--CCCCeEcHHHHHHHHHHH
Confidence            999  899999999999999764

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=99.01  E-value=1.7e-10  Score=88.85  Aligned_cols=63  Identities=24%  Similarity=0.415  Sum_probs=59.0

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.+|.|++|.|+.+||..++..++...+.++++.+|+.+|.|++|.|+++||..++..
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            467899999999999999999999999988889999999999999999999999999998854

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.00  E-value=2.7e-10  Score=105.84  Aligned_cols=60  Identities=27%  Similarity=0.414  Sum_probs=44.9

Q ss_pred             HhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          163 SIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       163 ~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      +.||.|++|.|+++||..++..+|..++++++..+|+.+|.|+||.|+++||.+++....
T Consensus       109 ~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~~~  168 (186)
T 2hps_A          109 DCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFL  168 (186)
T ss_dssp             HHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred             HHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHh
Confidence            666777777777777777777777667777777777777777777777777777776543

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.00  E-value=9.4e-10  Score=98.06  Aligned_cols=108  Identities=15%  Similarity=0.235  Sum_probs=87.5

Q ss_pred             HHHHHHhhCCCC-Cchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHH
Q 008959          122 DSEVFDLLDPSS-SNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKE  195 (547)
Q Consensus       122 l~~~F~~~D~d~-dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~  195 (547)
                      ++.+|..+|.|+ +|.|    +..++..++. .++..+   +..+|+.+|.+    |+++||..++.. +......++++
T Consensus        16 l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~-~~~~~~---~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~   87 (146)
T 2qac_A           16 ESDVRIYFNEKSSGGKISIDNASYNARKLGL-APSSID---EKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELI   87 (146)
T ss_dssp             HHHHHHHHHHHCBTTBEEHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHH
T ss_pred             HHHHHHHhCccCCCCcccHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHH
Confidence            889999999999 9999    6667777765 566666   88999999988    999999999886 34445678899


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhh
Q 008959          196 ELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVA  241 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~  241 (547)
                      .+|+.+|.|++|+|+.+||.+++..++...+.    ..+..++...
T Consensus        88 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~  129 (146)
T 2qac_A           88 KMFAHFDNNCTGYLTKSQMKNILTTWGDALTD----QEAIDALNAF  129 (146)
T ss_dssp             HHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCH----HHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCH----HHHHHHHHHc
Confidence            99999999999999999999999988765443    3455555544

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.00  E-value=2.3e-10  Score=93.24  Aligned_cols=84  Identities=21%  Similarity=0.375  Sum_probs=67.4

Q ss_pred             CCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcC
Q 008959          132 SSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVS  210 (547)
Q Consensus       132 d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is  210 (547)
                      |++|.| +.+.......   +..+...++.+|+.+|.|++|.|+.+||..++..++..++.+++..+|+.+|.|++|.|+
T Consensus         1 ~~~G~i~~~e~~~~~~l---~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~   77 (87)
T 1s6j_A            1 HSSGHIDDDDKHMAERL---SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID   77 (87)
T ss_dssp             CCSSSSSSHHHHSSSSS---CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEEC
T ss_pred             CCCCccCccHHHHHHHC---CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCc
Confidence            456777 5553322222   122222388999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 008959          211 VDELAALL  218 (547)
Q Consensus       211 ~~Ef~~~l  218 (547)
                      ++||..++
T Consensus        78 ~~eF~~~~   85 (87)
T 1s6j_A           78 YGEFIAAT   85 (87)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHHHHH
Confidence            99998654

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.00  E-value=9.9e-10  Score=102.82  Aligned_cols=63  Identities=25%  Similarity=0.440  Sum_probs=36.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHH-hcCCc-c------hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQ-V------AANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~-~lg~~-~------~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.+|.|++|+|+.+||..++. .+|.. +      +++++.++|+.+|.|+||.|+++||..++..
T Consensus       100 l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  170 (179)
T 3a8r_A          100 LRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ  170 (179)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            55566666666666666666666655 44443 3      4555666666666666666666666655543

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=98.99  E-value=1.3e-09  Score=89.61  Aligned_cols=71  Identities=17%  Similarity=0.380  Sum_probs=65.2

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++++...++.+|+.+|.|++|.|+.+||..++..+|...+.+++..+|+.+|.|++|.|+++||..++...
T Consensus        15 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~   85 (90)
T 1avs_A           15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   85 (90)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence            34555669999999999999999999999999999999999999999999999999999999999998653

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=98.99  E-value=1.3e-09  Score=99.31  Aligned_cols=92  Identities=16%  Similarity=0.289  Sum_probs=77.7

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcc---------------------------------hHHHHH
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV---------------------------------AANKKE  195 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~---------------------------------~~eel~  195 (547)
                      ..++++...++++|+.+|.|++|.|+.+||..++..+|...                                 ++++++
T Consensus         9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~   88 (153)
T 3i5g_B            9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALR   88 (153)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHHH
Confidence            46778888899999999999999999999999999887522                                 345688


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhccc
Q 008959          196 ELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMV  244 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~  244 (547)
                      ++|+.||.|++|+|+.+||.++|..+|....+    ..+.+++...|..
T Consensus        89 ~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~----~ei~~~~~~~D~~  133 (153)
T 3i5g_B           89 NAFSMFDEDGQGFIPEDYLKDLLENMGDNFSK----EEIKNVWKDAPLK  133 (153)
T ss_dssp             HHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCH----HHHHHHHTTCCEE
T ss_pred             HHHhccccCCCCeEeHHHHHHHHHHcCCcCCH----HHHHHHHHHhCCC
Confidence            99999999999999999999999998876554    4577888777744

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=98.99  E-value=1.4e-09  Score=90.75  Aligned_cols=62  Identities=23%  Similarity=0.530  Sum_probs=60.0

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      ++.+|+.+|.|++|.|+.+||..++..+|...++++++++|+.+|.|++|.|+++||..++.
T Consensus        31 l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             HHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999999999999999885

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=98.99  E-value=2e-09  Score=98.52  Aligned_cols=107  Identities=13%  Similarity=0.173  Sum_probs=87.8

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK  199 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~  199 (547)
                      ++..+|..+|.|++|.| +.+++..+..    .   ..++.+|+.+|.|++|.|+.+||..++..+|..++.+++..+|+
T Consensus        43 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~----~---~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~  115 (167)
T 1gjy_A           43 TCRLMVSMLDRDMSGTMGFNEFKELWAV----L---NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAK  115 (167)
T ss_dssp             HHHHHHHHHCTTCCSCBCHHHHHHHHHH----H---HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHH----H---HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            38899999999999999 6666554321    1   23899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          200 AADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .+  |++|.|+++||.+++...          ..+.+++...|.+++
T Consensus       116 ~~--d~dg~i~~~eF~~~~~~~----------~~~~~~F~~~D~d~~  150 (167)
T 1gjy_A          116 RY--STSGKITFDDYIACCVKL----------RALTDSFRRRDSAQQ  150 (167)
T ss_dssp             HT--CBTTBEEHHHHHHHHHHH----------HHHHHHHHHHCTTCC
T ss_pred             Hh--CcCCcCcHHHHHHHHHHH----------HHHHHHHHHhCCCCC
Confidence            99  899999999999999764          234555555555443

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=98.99  E-value=8.7e-10  Score=104.21  Aligned_cols=128  Identities=11%  Similarity=0.047  Sum_probs=93.5

Q ss_pred             cCCCCCCCchhhHHHHH-hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcC---CCC
Q 008959           87 SDNTDKPIWNSEKKLLL-ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCS---VED  149 (547)
Q Consensus        87 i~~tLnP~Wne~~kll~-e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~---~~~  149 (547)
                      ....+.+..-..++.+| ....++.+.++..++            ..++..++..+    +|.| +.+++..+.   ...
T Consensus        47 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~  122 (196)
T 3dtp_E           47 VFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGT  122 (196)
T ss_dssp             SSCSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSS
T ss_pred             hhhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCC
Confidence            34456666555555544 444556777775444            22255666555    7888 555443332   212


Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      .....   +..+|+.+|.|++|.|+.+||..++ .+|..++.+++..+|..+|.|+||.|+++||.++|....
T Consensus       123 ~~~~~---l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~  191 (196)
T 3dtp_E          123 DEEDV---IVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGA  191 (196)
T ss_dssp             CCHHH---HHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSCC
T ss_pred             CcHHH---HHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcCC
Confidence            22334   8999999999999999999999999 999999999999999999999999999999999996543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.99  E-value=4.4e-10  Score=121.85  Aligned_cols=115  Identities=15%  Similarity=0.259  Sum_probs=91.1

Q ss_pred             hcCCCcccceecccC--------------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCC--CCChHHHHHHHH
Q 008959          104 ETNGPHVARISVFED--------------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVE--DPIETEKSFARR  160 (547)
Q Consensus       104 e~~~~~~~~isl~e~--------------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~--~~~~~e~~~l~~  160 (547)
                      ..+.++++.++..|+                    +.++..+|+.+|.|++|.| +.+++..+...  ...++   .++.
T Consensus       363 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~---~~~~  439 (504)
T 3q5i_A          363 KLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEE---RLRR  439 (504)
T ss_dssp             HHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHH---HHHH
T ss_pred             eeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHH---HHHH
Confidence            445666777776553                    1237889999999999999 66665544321  11233   3899


Q ss_pred             HHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          161 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       161 ~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      +|+.+|.|+||.|+.+||..++..  ..+++++++++|+.+|.|+||.|+++||.++|.....
T Consensus       440 ~F~~~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~  500 (504)
T 3q5i_A          440 AFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKICD  500 (504)
T ss_dssp             HHHHHCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC-
T ss_pred             HHHHhcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhcc
Confidence            999999999999999999999876  3478999999999999999999999999999987654

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.98  E-value=2.7e-10  Score=109.82  Aligned_cols=120  Identities=16%  Similarity=0.205  Sum_probs=82.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhh-cCCCCCChHH-HHHHHHHHHh----h-cCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLS-CSVEDPIETE-KSFARRILSI----V-DYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~-l~~~~~~~~e-~~~l~~~f~~----~-D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      ++++|..+|.|++|.|    +..++.. ++. .++..+ ...+..+|..    + |.|++|.|+++||..++..+....+
T Consensus        50 l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~~~~~~~  128 (219)
T 3cs1_A           50 RIELFKKFDKNETGKLCYDEVYSGCLEVLKL-DEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYD  128 (219)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHTTCG-GGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHHHhccch
Confidence            8999999999999999    5555544 444 333222 2223334432    2 3488999999999988755433345


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc-cCcccccchhHHHHHhhhcccCc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQE-KEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~-~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .++++.+|+.+|.|++|+|+.+||.+++..++. ....    ..+.+++...|.+++
T Consensus       129 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~----~e~~~l~~~~D~d~d  181 (219)
T 3cs1_A          129 FFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKV----EDPAALFKELDKNGT  181 (219)
T ss_dssp             HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCC----SCHHHHHHHHCTTSS
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCH----HHHHHHHHHhCCCCC
Confidence            677999999999999999999999999988875 3332    236666766665443

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=98.98  E-value=1.5e-09  Score=89.41  Aligned_cols=72  Identities=21%  Similarity=0.430  Sum_probs=65.4

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      .+....++.+|+.+|.|++|.|+.+||..++..+|..++.+++..+|+.+|.|++|.|+++||..++.....
T Consensus         5 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~   76 (92)
T 2kn2_A            5 TDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRG   76 (92)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccC
Confidence            334455999999999999999999999999999999999999999999999999999999999999977543

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=98.97  E-value=1.4e-09  Score=96.02  Aligned_cols=87  Identities=11%  Similarity=0.285  Sum_probs=71.1

Q ss_pred             CCCchh-HHHHhhhcCCCC--CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCC
Q 008959          132 SSSNKI-VGKISLSCSVED--PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGV  208 (547)
Q Consensus       132 d~dG~I-l~~ll~~l~~~~--~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~  208 (547)
                      +++|.| +.+++..+....  ........++.+|+.+|.|++|.|+.+||..++..+|..++++++..+|+.+|. ++|.
T Consensus        49 ~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~  127 (140)
T 1ggw_A           49 TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGM  127 (140)
T ss_dssp             TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCC
T ss_pred             CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCc
Confidence            889999 665554433211  111112338999999999999999999999999999988999999999999999 9999


Q ss_pred             cCHHHHHHHHH
Q 008959          209 VSVDELAALLA  219 (547)
Q Consensus       209 Is~~Ef~~~l~  219 (547)
                      |+++||.+++.
T Consensus       128 i~~~eF~~~~~  138 (140)
T 1ggw_A          128 VNYHDFVQMIL  138 (140)
T ss_dssp             STTTHHHHHHH
T ss_pred             EeHHHHHHHHh
Confidence            99999999885

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=98.97  E-value=1.9e-09  Score=105.49  Aligned_cols=102  Identities=23%  Similarity=0.334  Sum_probs=82.0

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhc----CCCCCChHHH-HHHHHHHHhhcCCCCCcccHHHHHHHHHhc------
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSC----SVEDPIETEK-SFARRILSIVDYNQDGQLSFKEFSDLISAF------  185 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l----~~~~~~~~e~-~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l------  185 (547)
                      ++..+|..+|.|++|.|    +..++..+    +. .++..+. ..+..+|+.+|.|++|.|+++||..++...      
T Consensus       104 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~~  182 (263)
T 2f33_A          104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANK-TVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLK  182 (263)
T ss_dssp             HHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHHH
T ss_pred             HHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHHH
Confidence            38899999999999999    55555544    43 5555552 234559999999999999999999987531      


Q ss_pred             --CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          186 --GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       186 --g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                        ......+.++.+|+.+|.|++|+|+.+||.+++...+.
T Consensus       183 ~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~  222 (263)
T 2f33_A          183 FQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCE  222 (263)
T ss_dssp             HHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHH
T ss_pred             hcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHH
Confidence              23356788999999999999999999999999998876

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=98.97  E-value=1.9e-09  Score=100.08  Aligned_cols=82  Identities=15%  Similarity=0.314  Sum_probs=57.1

Q ss_pred             HHHHHHhhCCCCCch-h-HHHHhhh---cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-----cchH
Q 008959          122 DSEVFDLLDPSSSNK-I-VGKISLS---CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-----QVAA  191 (547)
Q Consensus       122 l~~~F~~~D~d~dG~-I-l~~ll~~---l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-----~~~~  191 (547)
                      ..++|..+|.|++|. | +.+++..   +........   .++.+|+.+|.|++|.|+.+||..++..++.     .+++
T Consensus        62 ~~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~---~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~  138 (183)
T 1dgu_A           62 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDI---KSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSA  138 (183)
T ss_dssp             HHHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHH---HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHH
T ss_pred             HHHHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHH---HHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCH
Confidence            567888888888888 8 4444332   221112122   3888888889888899999998888888765     5677


Q ss_pred             HHHHH----HHHHhcCCCC
Q 008959          192 NKKEE----LFKAADKNGD  206 (547)
Q Consensus       192 eel~~----~F~~~D~d~d  206 (547)
                      +++..    +|+.+|.|+|
T Consensus       139 ~~~~~~~~~~~~~~D~d~d  157 (183)
T 1dgu_A          139 SEMKQLIDNILEESDIDRD  157 (183)
T ss_dssp             HHHHHHHHHHHHHHCTTSS
T ss_pred             HHHHHHHHHHHHHhCCCCC
Confidence            77665    7777777654

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=98.96  E-value=6.4e-10  Score=109.38  Aligned_cols=102  Identities=16%  Similarity=0.247  Sum_probs=81.4

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhc----CCCCCChHH-HHHHHHHHHhhcCCCCCcccHHHHHHHHHhc------
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSC----SVEDPIETE-KSFARRILSIVDYNQDGQLSFKEFSDLISAF------  185 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l----~~~~~~~~e-~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l------  185 (547)
                      ++..+|..+|.|++|.|    +..++..+    +. .++..+ ...++.+|+.+|.|++|.|+++||..++...      
T Consensus       105 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~  183 (272)
T 2be4_A          105 EFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKK-KIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQ  183 (272)
T ss_dssp             HHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSSTT
T ss_pred             HHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHhh
Confidence            38899999999999999    55555544    33 455544 2335679999999999999999999987531      


Q ss_pred             ------CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          186 ------GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       186 ------g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                            +.....++++.+|+.+|.|++|+|+.+||.+++...+.
T Consensus       184 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~  227 (272)
T 2be4_A          184 FKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMME  227 (272)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHH
T ss_pred             hhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHH
Confidence                  22245678999999999999999999999999988765

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=98.96  E-value=2.8e-09  Score=100.61  Aligned_cols=106  Identities=13%  Similarity=0.183  Sum_probs=87.4

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      +..+|..+|.|++|.| +.+++..+..    .   ..++.+|+.+|.|++|.|+.+||..++..+|..++.++++++|+.
T Consensus        75 ~~~l~~~~D~d~~g~i~~~eF~~~~~~----~---~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~  147 (198)
T 1juo_A           75 CRLMVSMLDRDMSGTMGFNEFKELWAV----L---NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR  147 (198)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHH----H---HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeECHHHHHHHHHH----H---HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            7889999999999999 6666554321    1   238999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          201 ADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +  |+||.|+++||.+++...          ..+.+.+...|.+++
T Consensus       148 ~--d~dg~i~~~eF~~~~~~~----------~~~~~~F~~~D~d~~  181 (198)
T 1juo_A          148 Y--STNGKITFDDYIACCVKL----------RALTDSFRRRDTAQQ  181 (198)
T ss_dssp             T--CSSSSEEHHHHHHHHHHH----------HHHHHHHHHTCTTCC
T ss_pred             h--CCCCeEcHHHHHHHHHHH----------HHHHHHHHHhCCCCC
Confidence            9  899999999999999764          124455555555443

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=98.96  E-value=1.2e-09  Score=92.99  Aligned_cols=67  Identities=16%  Similarity=0.083  Sum_probs=60.6

Q ss_pred             HHHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVD-YNQD-GQLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D-~d~d-G~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...++++|+.|| .|++ |+|+.+||..++..     +|...++++++++|+.+|.|+||.|+|+||..++..+
T Consensus         9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~   82 (101)
T 3nso_A            9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   82 (101)
T ss_dssp             HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            455899999998 8987 99999999999986     4677889999999999999999999999999999764

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=98.95  E-value=2.8e-09  Score=99.67  Aligned_cols=120  Identities=18%  Similarity=0.213  Sum_probs=88.2

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhc---CCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVD---YNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D---~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      ++++.|..+|  ++|.| ..++...++. .++...   +..+|+.+|   .+++|.|+++||..++..+......++++.
T Consensus        29 ~~~~~F~~~D--~dG~I~~~el~~~lg~-~~~~~~---~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~~  102 (179)
T 3a8r_A           29 AVEKRFNQLQ--VDGVLLRSRFGKCIGM-DGSDEF---AVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRT  102 (179)
T ss_dssp             HHHHHHHHHC--BTTBEEGGGHHHHHTC-CSCHHH---HHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             HHHHHHhccC--CCCCCcHHHHHHHHCC-CCcHHH---HHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHHH
Confidence            3889999999  79999 4444444454 455555   677888777   577899999999999877654456788999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHH-hhhcc-Cccc--ccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLA-LQQEK-EPLM--NCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~-~l~~~-~~~~--~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|+||+|+.+||..++. .++.. ....  .....+.+++...|.+++
T Consensus       103 ~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~d  156 (179)
T 3a8r_A          103 FFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNL  156 (179)
T ss_dssp             HHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred             HHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCC
Confidence            99999999999999999999998 66643 1000  011347777777776544

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=98.95  E-value=2.6e-09  Score=96.31  Aligned_cols=123  Identities=13%  Similarity=0.106  Sum_probs=87.7

Q ss_pred             CCCCchhhHHHHH-hcCCCcccceecccChH------------HHHHHHHhhCCCCCchh-HHHHhhhcC---CCCCChH
Q 008959           91 DKPIWNSEKKLLL-ETNGPHVARISVFEDSD------------ADSEVFDLLDPSSSNKI-VGKISLSCS---VEDPIET  153 (547)
Q Consensus        91 LnP~Wne~~kll~-e~~~~~~~~isl~e~~~------------el~~~F~~~D~d~dG~I-l~~ll~~l~---~~~~~~~  153 (547)
                      +.+..-...+.++ ....++.+.++..++..            ++..++    .+++|.| +.+++..+.   .......
T Consensus        12 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~----~~~~g~i~~~eF~~~~~~~~~~~~~~~   87 (156)
T 1wdc_B           12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPLNFTMFLSIFSDKLSGTDSEE   87 (156)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH----TTSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH----HhCCCcCcHHHHHHHHHHHhcCCChHH
Confidence            4444333333333 34455667776554422            134444    3578888 554433321   1122334


Q ss_pred             HHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          154 EKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       154 e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .   ++.+|+.+|.|++|.|+.+||..++..+|..++++++..+|+.+|.| ||.|+++||.+++...
T Consensus        88 ~---l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~  151 (156)
T 1wdc_B           88 T---IRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  151 (156)
T ss_dssp             H---HHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             H---HHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence            4   89999999999999999999999999999999999999999999999 9999999999999653

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=98.94  E-value=5.1e-10  Score=87.32  Aligned_cols=62  Identities=23%  Similarity=0.468  Sum_probs=59.8

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      ++.+|+.+|.|++|.|+.+||..++..+|..++.+++..+|+.+|.|++|.|+++||..++.
T Consensus         8 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (71)
T 2b1u_A            8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA   69 (71)
T ss_dssp             HHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999999999999999874

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=98.93  E-value=1.2e-09  Score=95.83  Aligned_cols=68  Identities=18%  Similarity=0.187  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          154 EKSFARRILSIVDYNQDGQLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       154 e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ..+.+..+|+.||.| +|+|+.+||..+|..     ++...++++++++|+.+|.|+||.|+|+||..+|..+.
T Consensus        13 ~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~   85 (121)
T 4drw_A           13 AMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT   85 (121)
T ss_dssp             HHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            346689999999988 899999999999976     67888899999999999999999999999999998753

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.93  E-value=2.3e-09  Score=89.26  Aligned_cols=69  Identities=12%  Similarity=0.263  Sum_probs=62.3

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.++...++++|+.+|.|++|+|+.+|+..++..+|  ++.+++.++++.+|.|+||.|+++||..++...
T Consensus         4 s~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~   72 (92)
T 1fi6_A            4 TDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             CHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            455666699999999999999999999999999887  678899999999999999999999999998653

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=98.92  E-value=2.2e-09  Score=88.77  Aligned_cols=67  Identities=25%  Similarity=0.390  Sum_probs=61.4

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +++...++.+|+.+|.|++|.|+.+||..++..+|  .+.++++.+|+.+|.|+||.|+++||..++..
T Consensus        23 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~   89 (91)
T 2pmy_A           23 GEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFLG   89 (91)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            44556699999999999999999999999999988  78889999999999999999999999998864

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=98.92  E-value=1.6e-09  Score=104.29  Aligned_cols=118  Identities=22%  Similarity=0.325  Sum_probs=85.0

Q ss_pred             HHHHHHhhCC-----CC-C--chh-HHHH--hhhcCCCCCChHHHHHHHHHHHhhcCCCCCc-ccHHHHHHHHHhcCCc-
Q 008959          122 DSEVFDLLDP-----SS-S--NKI-VGKI--SLSCSVEDPIETEKSFARRILSIVDYNQDGQ-LSFKEFSDLISAFGNQ-  188 (547)
Q Consensus       122 l~~~F~~~D~-----d~-d--G~I-l~~l--l~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~-Is~~Ef~~~l~~lg~~-  188 (547)
                      +.+.|..+|+     |+ +  |.| ..++  +..++. .+.      ..++|+.+|.|++|. |+++||..++..+... 
T Consensus        53 l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~l~~lg~-~~~------~~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~  125 (214)
T 2l4h_A           53 AHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKA-NPF------KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTA  125 (214)
T ss_dssp             HHHHHHHHSCGGGCCHHHHTTSEECHHHHTTCHHHHT-STT------HHHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHhCcccccccccccCCcCCHHHHHHhhccCC-ChH------HHHHHHHhCcCCCCCEecHHHHHHHHHHHcCCC
Confidence            7788888898     55 6  998 3333  444443 332      345799999999999 9999999999875543 


Q ss_pred             chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc-----cCcccccchhHHHHHhhhcccCc
Q 008959          189 VAANKKEELFKAADKNGDGVVSVDELAALLALQQE-----KEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       189 ~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~-----~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ..+++++.+|+.+|.|++|+|+.+||.+++..++.     ..........+.+++...|.+++
T Consensus       126 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~d  188 (214)
T 2l4h_A          126 TPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRD  188 (214)
T ss_dssp             CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCC
T ss_pred             CHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            45678999999999999999999999999998875     22221111123346776665443

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=98.91  E-value=2.6e-09  Score=86.86  Aligned_cols=71  Identities=14%  Similarity=0.152  Sum_probs=64.4

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHH---HHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANK---KEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~ee---l~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .++++...++.+|+.+|.|++|.|+.+||..++..+|...+.++   +..+|..+|.|++|.|++ ||..++...
T Consensus         8 l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~   81 (86)
T 1j7q_A            8 LGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW   81 (86)
T ss_dssp             CSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence            34555566999999999999999999999999999999999999   999999999999999999 999988653

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=98.91  E-value=1.8e-09  Score=86.12  Aligned_cols=63  Identities=25%  Similarity=0.547  Sum_probs=60.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++.+|+.+|.|++|.|+.+||..++..+| ..+.+++..+|+.+|.|++|.|+++||..++...
T Consensus         5 l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            5 MERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            88999999999999999999999999999 8899999999999999999999999999999764

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=98.91  E-value=3.4e-09  Score=91.92  Aligned_cols=70  Identities=19%  Similarity=0.267  Sum_probs=61.9

Q ss_pred             hHHHHHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          152 ETEKSFARRILSIVD-YNQDG-QLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ......++++|+.|| .|++| +|+.+||..++..     +|...++++++++|+.+|.|+||.|+|+||..++...
T Consensus        18 ~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~   94 (113)
T 2lnk_A           18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   94 (113)
T ss_dssp             HHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence            334556999999999 89997 9999999999986     6667788999999999999999999999999998664

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.90  E-value=2e-09  Score=90.21  Aligned_cols=69  Identities=22%  Similarity=0.247  Sum_probs=61.9

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.++...++++|+.+|.|++|+|+.+|+..++..+|  ++.++++++|+.+|.|+||.|+++||..+|...
T Consensus         5 s~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~   73 (95)
T 1c07_A            5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI   73 (95)
T ss_dssp             CSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            344556699999999999999999999999999886  678899999999999999999999999998653

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=98.90  E-value=1.9e-09  Score=85.12  Aligned_cols=64  Identities=23%  Similarity=0.429  Sum_probs=60.8

Q ss_pred             HHHHHHhh-cCCCC-CcccHHHHHHHHHhcCCcc--hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          158 ARRILSIV-DYNQD-GQLSFKEFSDLISAFGNQV--AANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       158 l~~~f~~~-D~d~d-G~Is~~Ef~~~l~~lg~~~--~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++.+|+.+ |.|++ |.|+.+||..++..+|..+  +.+++..+|+.+|.|++|.|+++||..++..+
T Consensus         7 l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A            7 IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            89999999 99999 9999999999999999888  89999999999999999999999999998764

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=98.90  E-value=5.2e-09  Score=89.43  Aligned_cols=69  Identities=16%  Similarity=0.192  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-cC----CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          153 TEKSFARRILSIVD-YNQD-GQLSFKEFSDLISA-FG----NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       153 ~e~~~l~~~f~~~D-~d~d-G~Is~~Ef~~~l~~-lg----~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .....++++|+.|| .|++ |+|+.+||..++.. +|    ...++++++++|+.+|.|+||.|+|+||..++..+
T Consensus        10 ~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~   85 (104)
T 3zwh_A           10 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI   85 (104)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            33466999999998 6785 89999999999986 55    44678999999999999999999999999999764

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=98.90  E-value=5.5e-09  Score=86.87  Aligned_cols=67  Identities=19%  Similarity=0.341  Sum_probs=61.0

Q ss_pred             HHHHHHHHHhhcCCCCC---cccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          155 KSFARRILSIVDYNQDG---QLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG---~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ...++.+|+.+| +++|   .|+.+||..++..     +|...+++++.++|+.+|.|+||.|+++||..++..+.
T Consensus         8 ~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~   82 (92)
T 3rm1_A            8 VVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT   82 (92)
T ss_dssp             HHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            455899999999 7766   9999999999999     88888999999999999999999999999999997753

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=98.89  E-value=5.2e-09  Score=95.66  Aligned_cols=95  Identities=17%  Similarity=0.193  Sum_probs=74.7

Q ss_pred             HHHHhhCCCCCchh-HHHHhh---hcCCCC-CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHH
Q 008959          124 EVFDLLDPSSSNKI-VGKISL---SCSVED-PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELF  198 (547)
Q Consensus       124 ~~F~~~D~d~dG~I-l~~ll~---~l~~~~-~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F  198 (547)
                      .+|..+|  ++|.| +.+++.   ...... ........++.+|+.+|.|++|.|+.+||..++..+|  ++++++..+|
T Consensus        59 ~l~~~~D--~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~~~~~~~~~  134 (174)
T 1q80_A           59 NFLTAVA--GGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASF  134 (174)
T ss_dssp             HTGGGTT--TTSCEEHHHHHHHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CCGGGHHHHH
T ss_pred             HHHHhcC--CCCeEcHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CCHHHHHHHH
Confidence            5678888  89998 444332   222100 0112234589999999999999999999999999986  7888999999


Q ss_pred             HHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          199 KAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       199 ~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      +.+|.|+||.|+++||.+++...-
T Consensus       135 ~~~D~d~dg~i~~~ef~~~~~~~~  158 (174)
T 1q80_A          135 DAIDTNNDGLLSLEEFVIAGSDFF  158 (174)
T ss_dssp             HHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHhCCCCCceEeHHHHHHHHHHHh
Confidence            999999999999999999997643

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=98.88  E-value=5.8e-09  Score=87.20  Aligned_cols=67  Identities=16%  Similarity=0.200  Sum_probs=57.9

Q ss_pred             HHHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-cC----CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVD-YNQD-GQLSFKEFSDLISA-FG----NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D-~d~d-G~Is~~Ef~~~l~~-lg----~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...++++|+.|| .|++ |+|+.+||..++.. +|    ...++++++++++.+|.|+||.|+|+||..++..+
T Consensus         9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~   82 (93)
T 4eto_A            9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   82 (93)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            456999999998 6885 89999999999986 65    34578899999999999999999999999999764

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.87  E-value=1.7e-09  Score=110.93  Aligned_cols=109  Identities=15%  Similarity=0.187  Sum_probs=79.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHH-HHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARR-ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~-~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +..+|..+|.|++|.|    +..++  ++. .++..+   +.. +|..+|.|++|.|+++||..++....      .+..
T Consensus       190 l~~~F~~~D~d~dG~Is~~El~~~l--~g~-~~~~~e---i~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~~  257 (323)
T 1ij5_A          190 LVADFRKIDTNSNGTLSRKEFREHF--VRL-GFDKKS---VQDALFRYADEDESDDVGFSEYVHLGLCLL------VLRI  257 (323)
T ss_dssp             SCCCHHHHCTTCCSEECHHHHHHHH--HHT-TCCCHH---HHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHH--cCC-CCCHHH---HHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHHH
Confidence            5667888888888888    44444  332 455555   778 88889999999999999988886533      7888


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHH-HhhhccCcccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALL-ALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l-~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|+||.+||..++ ..++...+.    ..+..++...|.+++
T Consensus       258 ~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~----~e~~~l~~~~D~d~d  304 (323)
T 1ij5_A          258 LYAFADFDKSGQLSKEEVQKVLEDAHIPESAR----KKFEHQFSVVDVDDS  304 (323)
T ss_dssp             HHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGC----STHHHHHHHHTTTTC
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHHHcCCCCCH----HHHHHHHHHHCCCCC
Confidence            8999999999999999999988 777654332    236666666664433

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=98.86  E-value=5.7e-09  Score=90.12  Aligned_cols=70  Identities=13%  Similarity=0.240  Sum_probs=62.6

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .++++...++.+|+.+|.|++|+|+.+||..++.  +..++.+++.++|+.+|.|+||.|+++||..++...
T Consensus         8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~   77 (111)
T 2kgr_A            8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI   77 (111)
T ss_dssp             SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            4455666799999999999999999999999998  556888999999999999999999999999998653

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=98.86  E-value=6.3e-09  Score=87.97  Aligned_cols=68  Identities=22%  Similarity=0.241  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          154 EKSFARRILSIVD-YNQDG-QLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       154 e~~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +...++.+|+.|| .|++| +|+.+||..++..     +|...++++++++|+.+|.|+||.|+|+||..++...
T Consensus         8 ~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   82 (99)
T 2y5i_A            8 AMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            3455999999998 89998 9999999999986     5667789999999999999999999999999999764

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=98.86  E-value=1.5e-09  Score=87.15  Aligned_cols=64  Identities=30%  Similarity=0.574  Sum_probs=60.5

Q ss_pred             HHHHHHHhhcCCCCCcccHHHHHHHHHhcC-CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          157 FARRILSIVDYNQDGQLSFKEFSDLISAFG-NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       157 ~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .++ +|+.+|.|++|.|+.+||..++..+| ..++.+++..+|+.+|.|++|.|+++||..++...
T Consensus        10 ~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   74 (81)
T 1c7v_A           10 ILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS   74 (81)
T ss_dssp             HHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred             HHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence            389 99999999999999999999999999 88999999999999999999999999999998653

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=98.85  E-value=6.5e-09  Score=94.29  Aligned_cols=109  Identities=6%  Similarity=0.050  Sum_probs=81.0

Q ss_pred             HHHHHHHhhCCCCCchhHHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       121 el~~~F~~~D~d~dG~Il~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      ++.+++..+|.+++-.-+..+          ......++.+|+.+|.|++|.|+.+||..++..+|...+.++++++|+.
T Consensus        25 ~~~~i~~~~d~~~~~~~~~~l----------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~   94 (150)
T 2jjz_A           25 RLAEINREFLCDQKYSDEENL----------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISE   94 (150)
T ss_dssp             HHHHHHHHHHTCGGGSSCTTH----------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCchhhHhH----------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            388888888887651001111          3344559999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCccc
Q 008959          201 ADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMI  248 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l~  248 (547)
                      +|.|++|.|+++||..++...   .      ..+.+++...|..++..
T Consensus        95 ~D~d~dg~I~~~eF~~~~~~~---~------~~i~~aF~~~D~d~~G~  133 (150)
T 2jjz_A           95 VTGGVSDTISYRDFVNMMLGK---R------SAVLKLVMMFEGKANES  133 (150)
T ss_dssp             HHTTSCSSBCHHHHHHHHHSS---S------CCHHHHHHC--------
T ss_pred             HCCCCCCcEeHHHHHHHHHHh---H------HHHHHHHHHHcCCCCCC
Confidence            999999999999999999653   1      23666666666555443

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=98.85  E-value=5.8e-10  Score=103.54  Aligned_cols=115  Identities=16%  Similarity=0.121  Sum_probs=83.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhc------CCCCCChHHHHHHHHH---------HHhhcCCCCCcccHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSC------SVEDPIETEKSFARRI---------LSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l------~~~~~~~~e~~~l~~~---------f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      ++++|..+|.|++|.|    +..++..+      +. .++..+   +..+         |+.+|.|++|.|+++|  .++
T Consensus        16 l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~-~~~~~~---~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~   89 (186)
T 2hps_A           16 MKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSA-EKAEET---RQEFLRVADQLGLAPGVRISVEEAAVNAT--DSL   89 (186)
T ss_dssp             HHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCH-HHHHHH---HHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHH
T ss_pred             HHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCC-CCCcHH---HHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHH
Confidence            8999999999999999    44444433      32 333344   5555         6999999999999999  666


Q ss_pred             HhcCCcc-hHHHHHHHH--HHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          183 SAFGNQV-AANKKEELF--KAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       183 ~~lg~~~-~~eel~~~F--~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ..+.... ..+++...|  ..||.|++|+|+.+||.+++..++.....    ..+.+++...|.+++
T Consensus        90 ~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~----~~~~~~~~~~D~d~d  152 (186)
T 2hps_A           90 LKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTD----DKAITCFNTLDFNKN  152 (186)
T ss_dssp             HHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCH----HHHHHHHHHHCTTCS
T ss_pred             HHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCH----HHHHHHHHHHcCCCC
Confidence            6654322 234566656  78899999999999999999988754333    357777777775544

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=98.85  E-value=5.3e-09  Score=87.66  Aligned_cols=68  Identities=19%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHhhc-CCC-CCcccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          154 EKSFARRILSIVD-YNQ-DGQLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       154 e~~~l~~~f~~~D-~d~-dG~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +...++.+|+.|| .|+ +|+|+.+||..++..     +|...++++++++|+.+|.|+||.|+++||..++...
T Consensus         7 ~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (95)
T 1j55_A            7 AMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (95)
T ss_dssp             HHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            3455999999999 788 589999999999986     4666788899999999999999999999999999653

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=98.85  E-value=5e-09  Score=86.43  Aligned_cols=69  Identities=28%  Similarity=0.379  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          154 EKSFARRILSIVD-YNQDG-QLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       154 e~~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ....++.+|+.+| .|++| .|+.+||..++..     +|...+.++++++|+.+|.|++|.|+++||..++....
T Consensus         7 ~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~   82 (93)
T 1k2h_A            7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            3455999999999 79999 9999999999998     88889999999999999999999999999999997653

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.85  E-value=6.2e-09  Score=117.82  Aligned_cols=107  Identities=17%  Similarity=0.226  Sum_probs=89.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhc-------CCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSC-------SVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l-------~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      ++++|+.+| |++|.|    +..++..+       ....++.++   ++.+|..+|.|++|.|+++||..++..+     
T Consensus       534 l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~---~~~l~~~~D~d~~G~I~f~EF~~l~~~~-----  604 (714)
T 3bow_A          534 FRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIET---CKIMVDMLDEDGSGKLGLKEFYILWTKI-----  604 (714)
T ss_dssp             HHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHH---HHHHHHHHCCSSCSSBCHHHHHHHHHHH-----
T ss_pred             HHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHH-----
Confidence            999999999 999999    66666665       123566666   8999999999999999999999999764     


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                       ++++.+|+.+|.|++|+|+.+||.+++..++....+    ..+..++...|
T Consensus       605 -~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~----~~~~~l~~~~D  651 (714)
T 3bow_A          605 -QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC----QLHQVIVARFA  651 (714)
T ss_dssp             -HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCH----HHHHHHHHHHS
T ss_pred             -HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCH----HHHHHHHHHhC
Confidence             689999999999999999999999999988765443    35667776666

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=98.82  E-value=1.1e-08  Score=90.91  Aligned_cols=91  Identities=10%  Similarity=0.182  Sum_probs=74.6

Q ss_pred             HHHHHHHHhhCCCCCchh-HHHHhhhcC---CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHH
Q 008959          120 DADSEVFDLLDPSSSNKI-VGKISLSCS---VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE  195 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I-l~~ll~~l~---~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~  195 (547)
                      .++..+|..+|.+    | +.+++..+.   .......+   ++.+|+.+|.|++|.|+.+||..++..+|..++++++.
T Consensus        51 ~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~---l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~  123 (146)
T 2qac_A           51 IDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEE---LIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAI  123 (146)
T ss_dssp             HHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHH---HHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHH
T ss_pred             HHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHH---HHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHH
Confidence            3488899999988    6 444433322   11222333   89999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          196 ELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      .+|+.+  |+||.|+++||.++|.
T Consensus       124 ~~~~~~--d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A          124 DALNAF--SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             HHHHHH--CSSSEEEHHHHHHHHT
T ss_pred             HHHHHc--CCCCcCcHHHHHHHHh
Confidence            999999  9999999999999874

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.82  E-value=4.2e-09  Score=84.83  Aligned_cols=64  Identities=28%  Similarity=0.380  Sum_probs=59.4

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcC--CcchHHHHHH----HHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFG--NQVAANKKEE----LFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg--~~~~~eel~~----~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++.+|+.+|.|++|.|+.+||..++..++  ...+.+++..    +|+.+|.|+||.|+++||.+.+..+
T Consensus         9 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~   78 (83)
T 1yx7_A            9 LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL   78 (83)
T ss_dssp             HHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence            89999999999999999999999999999  7888888888    9999999999999999999877543

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=98.82  E-value=8.2e-09  Score=87.87  Aligned_cols=69  Identities=9%  Similarity=0.138  Sum_probs=63.6

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++....++.+|+.+|.|++|.|+.+||..++..+|...+.+++..+|..+|.|++|.|+++||..++..
T Consensus        28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~   96 (107)
T 2d58_A           28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG   96 (107)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            344556999999999999999999999999999999999999999999999999999999999998854

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=98.82  E-value=2.7e-09  Score=89.45  Aligned_cols=69  Identities=22%  Similarity=0.228  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          153 TEKSFARRILSIVD-YNQDG-QLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       153 ~e~~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+...++++|+.|| .|++| +|+.+||..++..     +|...++++++++|+.+|.|+||.|+|+||..++...
T Consensus         9 ~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~   84 (95)
T 2wcb_A            9 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   84 (95)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            33456999999999 89998 9999999999986     4556788999999999999999999999999998653

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=98.81  E-value=1e-08  Score=94.00  Aligned_cols=95  Identities=15%  Similarity=0.236  Sum_probs=71.7

Q ss_pred             CCChHHHHHHHHHHHhhcC--CCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCc
Q 008959          149 DPIETEKSFARRILSIVDY--NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEP  226 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~--d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~  226 (547)
                      ..++++...++++|..||.  |++|.|+..||..+|+.+|..++++++.+++. .|.+++|.|+++||..++........
T Consensus         2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~   80 (159)
T 3i5g_C            2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT   80 (159)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence            3567777789999999995  89999999999999999999999999988764 47788999999999999877654322


Q ss_pred             ccccchhHHHHHhhhcccC
Q 008959          227 LMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       227 ~~~~~~~~~~~l~~~D~~~  245 (547)
                      .... ..+.++++..|..+
T Consensus        81 ~~~~-~~l~~aF~~fD~d~   98 (159)
T 3i5g_C           81 GTAA-DEFMEAFKTFDREG   98 (159)
T ss_dssp             TCCH-HHHHHHHHHHCTTS
T ss_pred             cchH-HHHHHHHHHHhcCC
Confidence            1111 23555555555433

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.81  E-value=6.5e-09  Score=87.92  Aligned_cols=62  Identities=19%  Similarity=0.295  Sum_probs=58.4

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++.+|+.+|.|++|+|+.+|+..++..++  ++.+++.++|+.+|.|+||.|+++||..+|...
T Consensus        13 ~~~~F~~~D~d~dG~Is~~el~~~l~~~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~   74 (99)
T 1qjt_A           13 YEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             HHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            89999999999999999999999999876  678999999999999999999999999999664

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=98.81  E-value=6.7e-09  Score=86.23  Aligned_cols=67  Identities=15%  Similarity=0.165  Sum_probs=61.0

Q ss_pred             HHHHHHHHHhhcC-CCCC-cccHHHHHHHH-HhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVDY-NQDG-QLSFKEFSDLI-SAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D~-d~dG-~Is~~Ef~~~l-~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...++.+|+.+|. |++| .|+.+||..++ ..+|..++.+++..+|+.+|.|+||.|+++||..++...
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~   78 (93)
T 1xk4_A            9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM   78 (93)
T ss_dssp             HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3458999999999 9999 99999999999 678877777889999999999999999999999999764

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=98.80  E-value=7.6e-09  Score=88.70  Aligned_cols=69  Identities=17%  Similarity=0.210  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-cCCcch-HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          153 TEKSFARRILSIVD-YNQD-GQLSFKEFSDLISA-FGNQVA-ANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       153 ~e~~~l~~~f~~~D-~d~d-G~Is~~Ef~~~l~~-lg~~~~-~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+...++++|+.|| .|++ |+|+.+||..++.. +|...+ ++++.++|+.+|.|+||.|+|+||..++...
T Consensus        19 ~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           19 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            33456999999999 7987 79999999999986 775543 4789999999999999999999999998664

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=98.79  E-value=8.8e-09  Score=87.02  Aligned_cols=64  Identities=11%  Similarity=0.145  Sum_probs=60.6

Q ss_pred             HHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          157 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       157 ~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .++.+|+.+|.|++|.|+.+||..++..+|..++.++++.+|..+|.|++|.|+++||..++..
T Consensus        25 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~   88 (105)
T 1wlz_A           25 AITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSS   88 (105)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence            3899999999999999999999999999999999999999999999999999999999999854

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=98.79  E-value=1.7e-08  Score=86.51  Aligned_cols=68  Identities=18%  Similarity=0.218  Sum_probs=61.8

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+.++...++++|+.+|. +||+|+.+|+..++..+|  ++.+++.++++.+|.|+||.|+++||..+|..
T Consensus         9 ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~   76 (106)
T 1eh2_A            9 VKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL   76 (106)
T ss_dssp             SCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            445666779999999999 999999999999999887  78899999999999999999999999999855

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=98.78  E-value=2.1e-08  Score=84.99  Aligned_cols=68  Identities=16%  Similarity=0.181  Sum_probs=58.3

Q ss_pred             HHHHHHHHHhhcCCC---CCcccHHHHHHHHHh-cCCc----chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          155 KSFARRILSIVDYNQ---DGQLSFKEFSDLISA-FGNQ----VAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~---dG~Is~~Ef~~~l~~-lg~~----~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ...++++|+.||.++   +|+|+.+||..++.. ++..    .++++++++|+.+|.|+||.|+|+||..+|..+.
T Consensus        10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~   85 (100)
T 3nxa_A           10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT   85 (100)
T ss_dssp             HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            456999999999964   799999999999987 3332    3468899999999999999999999999997754

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=98.78  E-value=1.2e-08  Score=104.77  Aligned_cols=94  Identities=21%  Similarity=0.293  Sum_probs=81.6

Q ss_pred             HHHH-HHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH-HhcCCcchHHHHHHH
Q 008959          121 ADSE-VFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI-SAFGNQVAANKKEEL  197 (547)
Q Consensus       121 el~~-~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l-~~lg~~~~~eel~~~  197 (547)
                      ++.. +|..+|.|++|.| +.+++..+..    ..   .+..+|+.+|.|++|.|+.+||..++ ..+|..++++++..+
T Consensus       223 ei~~~l~~~~D~d~dG~Is~~EF~~~l~~----~~---~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l  295 (323)
T 1ij5_A          223 SVQDALFRYADEDESDDVGFSEYVHLGLC----LL---VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQ  295 (323)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHH----HH---HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHH
T ss_pred             HHHHHHHHHhcCCCCCEEeHHHHHHHHHH----HH---HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHH
Confidence            3788 9999999999999 6655544321    11   38999999999999999999999999 889999999999999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          198 FKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      |..+|.|+||.|+++||..++...
T Consensus       296 ~~~~D~d~dG~Is~~EF~~~~~~~  319 (323)
T 1ij5_A          296 FSVVDVDDSKSLSYQEFVMLVLLM  319 (323)
T ss_dssp             HHHHTTTTCSEECHHHHHHHHHHH
T ss_pred             HHHHCCCCCCcEeHHHHHHHHHHh
Confidence            999999999999999999998654

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=98.78  E-value=9.4e-09  Score=85.44  Aligned_cols=67  Identities=22%  Similarity=0.323  Sum_probs=59.7

Q ss_pred             HHHHHHHHHhhc-CCCCC-cccHHHHHHHHHh---cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          155 KSFARRILSIVD-YNQDG-QLSFKEFSDLISA---FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       155 ~~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~---lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ...++.+|+.+| .|++| .|+.+||..++..   ++. .++++++++|+.+|.|+||.|+++||..++....
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~~   80 (92)
T 2kax_A            9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTMLC   80 (92)
T ss_dssp             HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            455899999999 99999 9999999999987   334 7788999999999999999999999999997653

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=98.77  E-value=9.1e-09  Score=84.08  Aligned_cols=67  Identities=24%  Similarity=0.323  Sum_probs=61.6

Q ss_pred             HHHHHHHHHhhc-CCCCC-cccHHHHHHHHHh---cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVD-YNQDG-QLSFKEFSDLISA---FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~---lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...++.+|+.+| .|++| .|+.+||..++..   +|...+.++++++|+.+|.|+||.|+++||..++..+
T Consensus         9 ~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   80 (90)
T 1k8u_A            9 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   80 (90)
T ss_dssp             HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            345899999999 59999 9999999999997   8888899999999999999999999999999998664

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.77  E-value=3.4e-09  Score=91.47  Aligned_cols=67  Identities=10%  Similarity=0.191  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          153 TEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       153 ~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++...++++|+.+|.|++|+|+.+|+..++..++  ++.+++.++++.+|.|+||.|+++||..+|...
T Consensus        19 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~   85 (110)
T 1iq3_A           19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            3344599999999999999999999999998776  677889999999999999999999999998653

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=98.76  E-value=9.2e-09  Score=99.60  Aligned_cols=86  Identities=16%  Similarity=0.229  Sum_probs=68.2

Q ss_pred             CCCCCchh-HHHHhh---hcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHHHHHHHHhc
Q 008959          130 DPSSSNKI-VGKISL---SCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAAD  202 (547)
Q Consensus       130 D~d~dG~I-l~~ll~---~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel~~~F~~~D  202 (547)
                      |.|++|.| +.+++.   .+..    ......++.+|+.+|.|++|.|+.+||..++..+   +..  .+++..+|+.+|
T Consensus       107 D~d~~G~I~~~EF~~~~~~~~~----~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~--~~e~~~~~~~~D  180 (226)
T 2lvv_A          107 KVKGVGEEDLVEFLEFRLMLCY----IYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVD--ITDATTVFNEID  180 (226)
T ss_dssp             HHSCCCCCSCBCHHHHHHHHHH----HHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCC--CCSCHHHHHHHC
T ss_pred             CCCCCCcCCHHHHHHHHHHHHh----ccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCC--HHHHHHHHHHhC
Confidence            99999999 333332   1111    1112348999999999999999999999999886   543  345999999999


Q ss_pred             CCCCCCcCHHHHHHHHHhh
Q 008959          203 KNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       203 ~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .|+||.|+++||.++|...
T Consensus       181 ~d~dG~Is~~EF~~~~~~~  199 (226)
T 2lvv_A          181 TNGSGVVTFDEFSCWAVTK  199 (226)
T ss_dssp             CSCSSCEEHHHHHHHHHHH
T ss_pred             CCCCCcEeHHHHHHHHHhc
Confidence            9999999999999999764

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=98.75  E-value=6.3e-09  Score=82.54  Aligned_cols=65  Identities=34%  Similarity=0.464  Sum_probs=59.7

Q ss_pred             HHHHHHHhhcC-CCCC-cccHHHHHHHHHh-cCCcc-hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          157 FARRILSIVDY-NQDG-QLSFKEFSDLISA-FGNQV-AANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       157 ~l~~~f~~~D~-d~dG-~Is~~Ef~~~l~~-lg~~~-~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .++.+|+.+|. |++| .|+.+||..++.. +|... +.++++.+|+.+|.|++|.|+++||..++..+
T Consensus         8 ~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   76 (78)
T 1cb1_A            8 ELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence            38999999999 9999 9999999999986 88777 88899999999999999999999999998654

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=98.75  E-value=3.4e-09  Score=117.86  Aligned_cols=110  Identities=17%  Similarity=0.198  Sum_probs=45.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++++|+.+|.|++|.|    +..++..++. .+++++   ++.+|+.+|.|++|.|+++||..++..+..   .++++++
T Consensus        13 l~~~F~~fD~d~dG~Is~~El~~~l~~lg~-~~s~~e---l~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~~el~~a   85 (624)
T 1djx_A           13 IHSCLRKADKNKDNKMNFKELKDFLKELNI-QVDDGY---ARKIFRECDHSQTDSLEDEEIETFYKMLTQ---RAEIDRA   85 (624)
T ss_dssp             -----------------------------------------------------------CTTHHHHHHTC---CHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---HHHHHHH
Confidence            8899999999999999    5566666664 455555   899999999999999999999999987643   4789999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhh-hcc-CcccccchhHHHHHhhhcc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQ-QEK-EPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l-~~~-~~~~~~~~~~~~~l~~~D~  243 (547)
                      |+.+|.+ +|+|+.+||.++|... ++. ..+    ..+.+++.+.|.
T Consensus        86 F~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~----ee~~~ii~~~d~  128 (624)
T 1djx_A           86 FEEAAGS-AETLSVERLVTFLQHQQREEEAGP----ALALSLIERYEP  128 (624)
T ss_dssp             HHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSH----HHHHHHHHHHCC
T ss_pred             HHHhcCC-CCeecHHHHHHHHHHHhCCCCCCH----HHHHHHHHHhCC
Confidence            9999986 9999999999999875 333 221    347777776654

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=98.74  E-value=3.2e-08  Score=85.55  Aligned_cols=68  Identities=19%  Similarity=0.195  Sum_probs=60.3

Q ss_pred             HHHHHHHHHhhcC-CCCC-cccHHHHHHHHH-hcCCc-----chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          155 KSFARRILSIVDY-NQDG-QLSFKEFSDLIS-AFGNQ-----VAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       155 ~~~l~~~f~~~D~-d~dG-~Is~~Ef~~~l~-~lg~~-----~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ...++.+|+.||. |++| .|+.+||..++. .++..     .+.++++++|+.+|.|+||.|+++||..++....
T Consensus        11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~   86 (113)
T 1xk4_C           11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT   86 (113)
T ss_dssp             HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH
Confidence            4558999999995 9999 999999999999 67742     5788999999999999999999999999997653

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=98.70  E-value=3e-08  Score=84.09  Aligned_cols=87  Identities=14%  Similarity=0.174  Sum_probs=69.8

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh---hccC
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ---QEKE  225 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l---~~~~  225 (547)
                      .+++.+   ++.+|+.+|  ++|.|+++||..++..  ...+.++++.+|+.+|.|++|+|+.+||..++..+   +...
T Consensus         6 ~~~~~e---i~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~   78 (109)
T 3fs7_A            6 ILSAKD---IESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL   78 (109)
T ss_dssp             TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred             cCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence            566777   899999998  8999999999999864  23567889999999999999999999999999887   4333


Q ss_pred             cccccchhHHHHHhhhcccCc
Q 008959          226 PLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       226 ~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ..    ..+.+++...|.+++
T Consensus        79 ~~----~~~~~~~~~~D~~~d   95 (109)
T 3fs7_A           79 TS----AETKAFLAAGDTDGD   95 (109)
T ss_dssp             CH----HHHHHHHHHHCTTCS
T ss_pred             CH----HHHHHHHHHhCCCCC
Confidence            32    356777777665443

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=98.70  E-value=7.4e-09  Score=99.60  Aligned_cols=87  Identities=20%  Similarity=0.193  Sum_probs=69.7

Q ss_pred             CCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-cchHHHHHHHHHHhcCCC
Q 008959          131 PSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-QVAANKKEELFKAADKNG  205 (547)
Q Consensus       131 ~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~~~eel~~~F~~~D~d~  205 (547)
                      .|++|.|    |..++..+..    ......++.+|+.+|.|++|.|+.+||..++..+|. .++.+++..+|+.+|.|+
T Consensus       105 ~d~~g~I~~~EF~~~~~~~~~----~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~  180 (219)
T 3cs1_A          105 LENKGSEDFVEFLEFRLMLCY----IYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNG  180 (219)
T ss_dssp             HHTSCCCSSBCHHHHHHHHHH----HHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTS
T ss_pred             cCCCCcCCHHHHHHHHHHHhc----cchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCC
Confidence            3788888    3333222211    112234899999999999999999999999998886 688889999999999999


Q ss_pred             CCCcCHHHHHHHHHhh
Q 008959          206 DGVVSVDELAALLALQ  221 (547)
Q Consensus       206 dG~Is~~Ef~~~l~~l  221 (547)
                      ||.|+++||.+++...
T Consensus       181 dG~I~~~EF~~~~~~~  196 (219)
T 3cs1_A          181 TGSVTFDEFAAWASAV  196 (219)
T ss_dssp             SSEEEHHHHHHHHHHH
T ss_pred             CCcEeHHHHHHHHHHh
Confidence            9999999999999663

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=98.69  E-value=4.4e-08  Score=110.88  Aligned_cols=107  Identities=14%  Similarity=0.207  Sum_probs=88.2

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      ++.+|..+|.|++|.| +.++...+..       ...++.+|+.+|.|++|.|+.+||..++..+|..++.++++.+|+.
T Consensus       577 ~~~l~~~~D~d~~G~I~f~EF~~l~~~-------~~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~  649 (714)
T 3bow_A          577 CKIMVDMLDEDGSGKLGLKEFYILWTK-------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVAR  649 (714)
T ss_dssp             HHHHHHHHCCSSCSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHH-------HHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            6789999999999999 6666554321       1338999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          201 ADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +| |+||.|+++||..++....          .+.+++...|.+++
T Consensus       650 ~D-d~dG~Isf~EF~~~l~~~~----------~l~~~F~~~D~d~d  684 (714)
T 3bow_A          650 FA-DDELIIDFDNFVRCLVRLE----------ILFKIFKQLDPENT  684 (714)
T ss_dssp             HS-CTTCEECHHHHHHHHHHHH----------HHHHHHSSSCSSCC
T ss_pred             hC-CCCCeEcHHHHHHHHHHHH----------HHHHHHHHhCCCCC
Confidence            99 9999999999999996531          34455555555444

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=98.69  E-value=5.4e-08  Score=96.24  Aligned_cols=94  Identities=12%  Similarity=0.128  Sum_probs=69.6

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCC-CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-------cCC-----
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVE-DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-------FGN-----  187 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~-~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-------lg~-----  187 (547)
                      +.-+|+.||.|++|.| +.++...+..- .-+.++  .++-+|+++| |+||+|+.+|+..++.+       +|+     
T Consensus       134 a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG~lee--KL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~  210 (261)
T 1eg3_A          134 LNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLED--KYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFG  210 (261)
T ss_dssp             HHHHHHHHCTTCCSEEEHHHHHHHHHHTSSSCHHH--HHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGT
T ss_pred             HHHHHHHccCCCCceEeHHHHHHHHHHHcCCCHHH--HHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            5668999999999999 65554443221 112222  3899999999 99999999999998855       232     


Q ss_pred             -cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          188 -QVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       188 -~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                       ...++.++.+|+.+|  +||.||.+||.+.+..
T Consensus       211 ~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~  242 (261)
T 1eg3_A          211 GSNIEPSVRSCFQFAN--NKPEIEAALFLDWMRL  242 (261)
T ss_dssp             CSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHHh
Confidence             234567889999986  7899999999998865

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=98.69  E-value=3.3e-08  Score=89.30  Aligned_cols=69  Identities=9%  Similarity=0.173  Sum_probs=63.6

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .++...++.+|+.+|.|++|.|+.+||..++..+|..++.+++.++|..+|.|++|.|+++||..++..
T Consensus        44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~  112 (147)
T 1wy9_A           44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLG  112 (147)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            344556999999999999999999999999999999999999999999999999999999999999854

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=98.68  E-value=6.2e-08  Score=82.11  Aligned_cols=90  Identities=16%  Similarity=0.174  Sum_probs=70.6

Q ss_pred             cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh---
Q 008959          145 CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ---  221 (547)
Q Consensus       145 l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l---  221 (547)
                      ++. .++..+   ++.+|+.+|  ++|.|+++||..++...  ....++++.+|+.+|.|++|+|+.+||.+++..+   
T Consensus         3 lg~-~~~~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~   74 (109)
T 1bu3_A            3 FSG-ILADAD---VAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAG   74 (109)
T ss_dssp             CSC-SSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTT
T ss_pred             ccc-cCCHHH---HHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccc
Confidence            443 577777   899999999  89999999999988532  2456789999999999999999999999999998   


Q ss_pred             hccCcccccchhHHHHHhhhcccCc
Q 008959          222 QEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       222 ~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.....    ..+.+++...|..++
T Consensus        75 g~~~~~----~~~~~~~~~~D~~~d   95 (109)
T 1bu3_A           75 ARALTD----AETKAFLKAGDSDGD   95 (109)
T ss_dssp             CCCCCH----HHHHHHHHHHCTTCS
T ss_pred             CCCCCH----HHHHHHHHHhCCCCC
Confidence            443332    356777777665443

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=98.68  E-value=1.4e-08  Score=85.85  Aligned_cols=68  Identities=15%  Similarity=0.188  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-----cCC--cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          153 TEKSFARRILSIVDYNQDGQLSFKEFSDLISA-----FGN--QVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       153 ~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-----lg~--~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++...++++|+.||.+ +|.|+.+||..++..     +|.  ..++++++++|+.+|.|+||.|+++||..++...
T Consensus         7 ~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (100)
T 1psr_A            7 RSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3445699999999976 799999999999987     454  5677889999999999999999999999999653

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=98.67  E-value=2.8e-08  Score=83.40  Aligned_cols=67  Identities=18%  Similarity=0.183  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          154 EKSFARRILSIVDYNQDGQLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       154 e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +...++.+|+.||. ++|.|+.+||..++..     +|...+.+++.++++.+|.|+||.|+++||..++...
T Consensus         7 ~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   78 (96)
T 1a4p_A            7 AMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (96)
T ss_dssp             HHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            34559999999994 5679999999999976     4556788899999999999999999999999999764

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=98.66  E-value=5.4e-08  Score=82.33  Aligned_cols=86  Identities=15%  Similarity=0.144  Sum_probs=68.0

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh---hccCc
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ---QEKEP  226 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l---~~~~~  226 (547)
                      +++.+   ++.+|+.+|  ++|.|+++||..++...  ..+.++++.+|+.+|.|++|+|+.+||.+++..+   +....
T Consensus         6 ~~~~e---~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   78 (108)
T 2pvb_A            6 LKDAD---VAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT   78 (108)
T ss_dssp             SCHHH---HHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC
T ss_pred             CCHHH---HHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCC
Confidence            66777   899999998  88999999999998532  3457789999999999999999999999999887   33332


Q ss_pred             ccccchhHHHHHhhhcccCc
Q 008959          227 LMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       227 ~~~~~~~~~~~l~~~D~~~~  246 (547)
                      .    ..+.+++...|..++
T Consensus        79 ~----~~~~~~~~~~D~~~d   94 (108)
T 2pvb_A           79 D----AETKAFLADGDKDGD   94 (108)
T ss_dssp             H----HHHHHHHHHHCTTCS
T ss_pred             H----HHHHHHHHHhCCCCC
Confidence            2    346677776665443

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=98.66  E-value=3.7e-08  Score=88.43  Aligned_cols=64  Identities=17%  Similarity=0.201  Sum_probs=58.8

Q ss_pred             HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...++.+|+.+| |++|+|+.+|+..+|..++  ++.+++.++++.+|.|+||.|+++||..+|...
T Consensus        50 ~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li  113 (139)
T 2jq6_A           50 KPTYDEIFYTLS-PVNGKITGANAKKEMVKSK--LPNTVLGKIWKLADVDKDGLLDDEEFALANHLI  113 (139)
T ss_dssp             HHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            445999999999 9999999999999999877  788999999999999999999999999998653

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=98.65  E-value=7.6e-08  Score=81.54  Aligned_cols=87  Identities=17%  Similarity=0.207  Sum_probs=69.8

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh---hccC
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ---QEKE  225 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l---~~~~  225 (547)
                      .+++++   ++.+|+.+|.  +|.|+++||..++...  ..+.++++.+|+.+|.|++|+|+.+||.+++..+   +...
T Consensus         5 ~~s~~e---i~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~   77 (109)
T 5pal_A            5 VLKADD---INKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL   77 (109)
T ss_dssp             TSCHHH---HHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             cCCHHH---HHHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence            456666   8999999997  8999999999988542  3567889999999999999999999999999988   5443


Q ss_pred             cccccchhHHHHHhhhcccCc
Q 008959          226 PLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       226 ~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ..    ..+.+++...|.+++
T Consensus        78 ~~----~~~~~~~~~~D~~~d   94 (109)
T 5pal_A           78 ND----TETKALLAAGDSDHD   94 (109)
T ss_dssp             CH----HHHHHHHHHHCTTCS
T ss_pred             CH----HHHHHHHHHhCCCCC
Confidence            33    356777777665443

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=98.65  E-value=1.1e-07  Score=86.30  Aligned_cols=89  Identities=18%  Similarity=0.248  Sum_probs=68.8

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCccc
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLM  228 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~  228 (547)
                      .+.++...++.+|..+|.|++|.|+.+||..++..+|. ..+.+++..+|...    +|.|+++||..++..........
T Consensus        19 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~~~   94 (166)
T 2mys_B           19 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPE   94 (166)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCCcH
Confidence            45566667999999999999999999999999999998 89999999999864    79999999999987653221111


Q ss_pred             ccchhHHHHHhhhcccC
Q 008959          229 NCCPVCGETLEVADMVN  245 (547)
Q Consensus       229 ~~~~~~~~~l~~~D~~~  245 (547)
                         ..+..++...|.++
T Consensus        95 ---~~l~~~F~~~D~d~  108 (166)
T 2mys_B           95 ---DVIMGAFKVLDPDG  108 (166)
T ss_pred             ---HHHHHHHHHhCCCC
Confidence               23455555555433

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=98.65  E-value=4.7e-08  Score=86.31  Aligned_cols=86  Identities=12%  Similarity=0.234  Sum_probs=66.7

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCccccc
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNC  230 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~  230 (547)
                      ++++...++.+|..+|.|++|.|+.+||..++..+|...+.+++..++..    ++|.|+++||..++.........   
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~---   74 (143)
T 3j04_B            2 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDP---   74 (143)
T ss_dssp             CHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCC---
T ss_pred             CHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCc---
Confidence            34556669999999999999999999999999999998999888888766    89999999999999864322111   


Q ss_pred             chhHHHHHhhhcc
Q 008959          231 CPVCGETLEVADM  243 (547)
Q Consensus       231 ~~~~~~~l~~~D~  243 (547)
                      ...+..++...|.
T Consensus        75 ~~~l~~~F~~~D~   87 (143)
T 3j04_B           75 EDVIRNAFACFDE   87 (143)
T ss_dssp             HHHHHHHHTTSCS
T ss_pred             HHHHHHHHHHHCC
Confidence            1235555555554

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=98.64  E-value=5.1e-08  Score=81.32  Aligned_cols=67  Identities=18%  Similarity=0.229  Sum_probs=59.5

Q ss_pred             HHHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-cC----CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVD-YNQDG-QLSFKEFSDLISA-FG----NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D-~d~dG-~Is~~Ef~~~l~~-lg----~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...++.+|..+| .|++| .|+.+||..++.. ++    ...+.++++.+|+.+|.|+||.|+++||..++..+
T Consensus        12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~   85 (99)
T 1qls_A           12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   85 (99)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            345899999998 99999 9999999999983 43    56788899999999999999999999999998664

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=98.64  E-value=1.4e-08  Score=90.22  Aligned_cols=85  Identities=6%  Similarity=0.053  Sum_probs=48.5

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh-ccCcccccchhHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ-EKEPLMNCCPVCG  235 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~-~~~~~~~~~~~~~  235 (547)
                      .+++|+.+|.|++|.|+++||..++.. +......++++.+|+.+|.|++|+|+.+||..++..++ +....    ..+.
T Consensus         5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~----~e~~   80 (135)
T 3h4s_E            5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSK----EDAQ   80 (135)
T ss_dssp             --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCH----HHHH
T ss_pred             HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCH----HHHH
Confidence            577899999999999999999999876 34344567899999999999999999999999999887 34443    3577


Q ss_pred             HHHhhhcccCc
Q 008959          236 ETLEVADMVNT  246 (547)
Q Consensus       236 ~~l~~~D~~~~  246 (547)
                      +++...|.+++
T Consensus        81 ~~~~~~D~d~d   91 (135)
T 3h4s_E           81 GMVREGDLDGD   91 (135)
T ss_dssp             HHHHHHCSSCS
T ss_pred             HHHHHhCCCCC
Confidence            77877775444

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=98.61  E-value=1.1e-07  Score=80.33  Aligned_cols=87  Identities=14%  Similarity=0.213  Sum_probs=68.3

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh---hccC
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ---QEKE  225 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l---~~~~  225 (547)
                      .+++.+   ++.+|+.+|  ++|.|+++||..++...  ....++++.+|+.+|.|++|+|+.+||.+++..+   +...
T Consensus         5 ~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (109)
T 1rwy_A            5 LLSAED---IKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL   77 (109)
T ss_dssp             HSCHHH---HHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             cCCHHH---HHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence            356666   899999999  89999999999988432  3456789999999999999999999999999998   3333


Q ss_pred             cccccchhHHHHHhhhcccCc
Q 008959          226 PLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       226 ~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ..    ..+..++...|..++
T Consensus        78 ~~----~~~~~~~~~~D~~~d   94 (109)
T 1rwy_A           78 SA----KETKTLMAAGDKDGD   94 (109)
T ss_dssp             CH----HHHHHHHHHHCTTCS
T ss_pred             CH----HHHHHHHHHHCCCCC
Confidence            22    346677776665443

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=98.59  E-value=3.5e-08  Score=83.52  Aligned_cols=63  Identities=24%  Similarity=0.400  Sum_probs=54.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHh-----cCCcchH-----------HHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISA-----FGNQVAA-----------NKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~-----lg~~~~~-----------eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.+|.|++|.|+.+||..++..     ++...+.           ..+..+|+.+|.|+||.|+++||..++..
T Consensus        22 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  100 (103)
T 1snl_A           22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR  100 (103)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence            789999999999999999999999986     4544332           24889999999999999999999998854

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=98.58  E-value=5.5e-08  Score=82.29  Aligned_cols=65  Identities=31%  Similarity=0.438  Sum_probs=55.0

Q ss_pred             ecccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          114 SVFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       114 sl~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      .+.+.+.+ ++++|+.||.|++|.|    +..++..++. .+++.+   ++.+|+.+|.|+||.|+++||..+|
T Consensus        29 ~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~-~~~~~e---i~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGY-MPNEVE---LEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             CCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTC-CCCTTT---HHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC-CCCHHH---HHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            34444444 9999999999999999    7778888876 677777   8999999999999999999999876

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=98.58  E-value=4.7e-08  Score=88.52  Aligned_cols=79  Identities=13%  Similarity=0.191  Sum_probs=60.5

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++.+|..||.|++|.|    +..++..++. .++..+   ++.+|+.+|.|++|.|+++||..++...     .+++..+
T Consensus        52 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~e---~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~~a  122 (150)
T 2jjz_A           52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGV-PKTHLE---MKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVLKL  122 (150)
T ss_dssp             HHHHHTTSCCCTTSSBCHHHHHHHHHHTTC-CCCHHH---HHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHHHH
T ss_pred             HHHHHHHhCCCCcCcCCHHHHHHHHHHcCC-CCCHHH---HHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHHHH
Confidence            8999999999999999    6667777764 566666   8999999999999999999999999754     4569999


Q ss_pred             HHHhcCCCCCCc
Q 008959          198 FKAADKNGDGVV  209 (547)
Q Consensus       198 F~~~D~d~dG~I  209 (547)
                      |+.+|.|++|.-
T Consensus       123 F~~~D~d~~G~~  134 (150)
T 2jjz_A          123 VMMFEGKANESS  134 (150)
T ss_dssp             HHC---------
T ss_pred             HHHHcCCCCCCC
Confidence            999999999984

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=98.58  E-value=8.1e-08  Score=81.41  Aligned_cols=86  Identities=22%  Similarity=0.300  Sum_probs=67.7

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh---hccC
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ---QEKE  225 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l---~~~~  225 (547)
                      .+++.+   ++.+|+.+|  ++|.|+++||..++..  .....++++.+|+.+|.|++|+|+.+||..++..+   +...
T Consensus         6 ~~t~~e---~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   78 (110)
T 1pva_A            6 LLKADD---IKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL   78 (110)
T ss_dssp             HSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCC
T ss_pred             cCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCC
Confidence            456666   899999998  8899999999999842  23466789999999999999999999999999887   3332


Q ss_pred             cccccchhHHHHHhhhcccC
Q 008959          226 PLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       226 ~~~~~~~~~~~~l~~~D~~~  245 (547)
                      ..    ..+.+++...|..+
T Consensus        79 ~~----~~~~~~~~~~d~~~   94 (110)
T 1pva_A           79 TD----AETKAFLKAADKDG   94 (110)
T ss_dssp             CH----HHHHHHHHHHCTTC
T ss_pred             CH----HHHHHHHHHhCCCC
Confidence            22    35677777666544

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=98.58  E-value=8.5e-08  Score=81.09  Aligned_cols=87  Identities=15%  Similarity=0.155  Sum_probs=68.1

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh---ccC
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ---EKE  225 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~---~~~  225 (547)
                      .+++.+   ++.+|+.+|  ++|.|+++||..++...  ....++++.+|+.+|.|++|+|+.+||.+++..++   ...
T Consensus         5 ~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (108)
T 1rro_A            5 ILSAED---IAAALQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL   77 (108)
T ss_dssp             TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred             cCCHHH---HHHHHHHcc--CCCCcCHHHHHHHHhcC--cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence            566777   899999998  89999999999988422  34567899999999999999999999999998874   322


Q ss_pred             cccccchhHHHHHhhhcccCc
Q 008959          226 PLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       226 ~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ..    ..+.+++...|..++
T Consensus        78 ~~----~~~~~~~~~~D~~~d   94 (108)
T 1rro_A           78 TE----SETKSLMDAADNDGD   94 (108)
T ss_dssp             CH----HHHHHHHHHHCCSSS
T ss_pred             CH----HHHHHHHHHhCCCCC
Confidence            22    346677776665443

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=98.57  E-value=4.1e-08  Score=113.97  Aligned_cols=107  Identities=17%  Similarity=0.194  Sum_probs=71.4

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCC-------CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSV-------EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~-------~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      ++++|..+| +++|.|    +..++..++.       ..++.++   ++.+|+.+|.|++|.|+++||..++..+     
T Consensus       536 l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~---~~~l~~~~D~d~~G~I~~~EF~~~~~~~-----  606 (900)
T 1qxp_A          536 FKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLES---CRSMVNLMDRDGNGKLGLVEFNILWNRI-----  606 (900)
T ss_dssp             -----CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHH---HHHHHHHHCC--CCCCCSSSHHHHHHHH-----
T ss_pred             HHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHH---HHHHHHHhCCCCCCcCCHHHHHHHHHHH-----
Confidence            788888899 888888    5555555442       1455555   7888888888888888888888887653     


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                       ++++.+|+.+|.|++|.|+.+||..++..++.....    ..+..++...|
T Consensus       607 -~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~----~~~~~l~~~~d  653 (900)
T 1qxp_A          607 -RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC----QLHQVIVARFA  653 (900)
T ss_dssp             -HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCH----HHHHHHHHHTS
T ss_pred             -HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCH----HHHHHHHHHhC
Confidence             678888888888888888888888888877654433    34555555554

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=98.53  E-value=7.8e-08  Score=84.33  Aligned_cols=80  Identities=15%  Similarity=0.199  Sum_probs=57.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-----
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-----  187 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-----  187 (547)
                      +..+|+.||.| +|.|    ++.++..     ++. ..++.+   +.++++.+|.|+||.|+|+||..++..+..     
T Consensus        17 l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~-~~~~~~---v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~he~   91 (121)
T 4drw_A           17 MMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLEN-QKDPLA---VDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDY   91 (121)
T ss_dssp             HHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTT-SSCTTH---HHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhccc-CCCHHH---HHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHHHH
Confidence            88999999998 8999    5555544     332 455666   899999999999999999999999865321     


Q ss_pred             -----------cchHHHHHHHHHHhcCCCC
Q 008959          188 -----------QVAANKKEELFKAADKNGD  206 (547)
Q Consensus       188 -----------~~~~eel~~~F~~~D~d~d  206 (547)
                                 .-+...++++|+.+|.|||
T Consensus        92 f~~~~k~~~~~~~~d~~~~e~~~~~d~~gd  121 (121)
T 4drw_A           92 FVVHMKQENLYFQGDSTVHEILSKLSLEGD  121 (121)
T ss_dssp             HTTSCC---------CCHHHHHHHCCC---
T ss_pred             HHHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence                       0122347788888887775

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=98.52  E-value=8.9e-09  Score=90.55  Aligned_cols=91  Identities=13%  Similarity=0.139  Sum_probs=55.3

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhh-----hcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISL-----SCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE  195 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~-----~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~  195 (547)
                      +..++..+    +|.| +.+++.     .+............++++|+.||    |+|+.+||..++..+|.  ++++++
T Consensus        14 i~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~--t~~ei~   83 (123)
T 2kld_A           14 VKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKGH--TDAEIE   83 (123)
T ss_dssp             -----------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCCS--SHHHHH
T ss_pred             HHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCC--CHHHHH
Confidence            45555544    6777 655554     22211122222234788999998    99999999999999997  889999


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          196 ELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ++|+.+|.|+||.|+++||.+++..+.
T Consensus        84 ~~~~~~D~d~dG~I~~~EF~~~~~~~~  110 (123)
T 2kld_A           84 AIFTKYDQDGDQELTEHEHQQMRDDLE  110 (123)
T ss_dssp             HHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred             HHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            999999999999999999999886654

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=98.50  E-value=6e-08  Score=87.61  Aligned_cols=79  Identities=10%  Similarity=0.140  Sum_probs=64.1

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++.+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++...     .+++..+
T Consensus        50 l~~~F~~~D~d~dG~I~~~El~~~l~~~g~-~~~~~~---~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~~a  120 (147)
T 1wy9_A           50 FKVKYMEFDLNGNGDIDIMSLKRMLEKLGV-PKTHLE---LKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAILRM  120 (147)
T ss_dssp             HHHHHTTSCCCTTSSEEHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGGGG
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHHHH
Confidence            8999999999999999    6667776664 566666   8999999999999999999999998643     5678899


Q ss_pred             HHHhcCCCCCCc
Q 008959          198 FKAADKNGDGVV  209 (547)
Q Consensus       198 F~~~D~d~dG~I  209 (547)
                      |+.+|.|++|..
T Consensus       121 F~~~D~d~~g~~  132 (147)
T 1wy9_A          121 ILMYEEKNKEHK  132 (147)
T ss_dssp             GGGCCCC-----
T ss_pred             HHHHccCCCCCC
Confidence            999999999984

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=98.48  E-value=7.7e-08  Score=106.96  Aligned_cols=93  Identities=11%  Similarity=0.103  Sum_probs=61.5

Q ss_pred             HHHHHHHhhCCCCCchh-HH---HHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCc-chHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VG---KISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQ-VAANKK  194 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~---~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~-~~~eel  194 (547)
                      +++++|+.+|.|++|.| +.   .++..+.    ..++   ++.+|+.+|.+ +|.|+.+||..+|.. .|.. ++++++
T Consensus        48 el~~lf~~~D~d~~G~I~f~EF~~~~~~l~----~~~e---l~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~  119 (624)
T 1djx_A           48 YARKIFRECDHSQTDSLEDEEIETFYKMLT----QRAE---IDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALA  119 (624)
T ss_dssp             --------------------CTTHHHHHHT----CCHH---HHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHH
T ss_pred             HHHHHHHHhCCCCCCeEeHHHHHHHHHHhc----cHHH---HHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHH
Confidence            38889999999999999 44   4444332    1234   89999999986 899999999999997 4666 899999


Q ss_pred             HHHHHHhcCC----CCCCcCHHHHHHHHHhh
Q 008959          195 EELFKAADKN----GDGVVSVDELAALLALQ  221 (547)
Q Consensus       195 ~~~F~~~D~d----~dG~Is~~Ef~~~l~~l  221 (547)
                      +++++.+|.|    ++|.|+++||.++|...
T Consensus       120 ~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~  150 (624)
T 1djx_A          120 LSLIERYEPSETAKAQRQMTKDGFLMYLLSA  150 (624)
T ss_dssp             HHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred             HHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence            9999999998    79999999999999753

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=98.46  E-value=5.5e-07  Score=104.54  Aligned_cols=92  Identities=14%  Similarity=0.196  Sum_probs=78.0

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      ++.+|..+|.|++|.| +.+++..+..    .   ..++.+|+.+|.|++|.|+.+||..++..+|..++.++++.+|+.
T Consensus       579 ~~~l~~~~D~d~~G~I~~~EF~~~~~~----~---~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~  651 (900)
T 1qxp_A          579 CRSMVNLMDRDGNGKLGLVEFNILWNR----I---RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR  651 (900)
T ss_dssp             HHHHHHHHCC--CCCCCSSSHHHHHHH----H---HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHH----H---HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            7889999999999999 4444433221    1   338999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCcCHHHHHHHHHhh
Q 008959          201 ADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +| |++|.|+++||..++...
T Consensus       652 ~d-d~dg~I~~~eF~~~~~~~  671 (900)
T 1qxp_A          652 FA-DDELIIDFDNFVRCLVRL  671 (900)
T ss_dssp             TS-CSSSBCCHHHHHHHHHHH
T ss_pred             hC-CCCCeEcHHHHHHHHHHH
Confidence            99 999999999999998764

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.45  E-value=1.1e-07  Score=109.70  Aligned_cols=106  Identities=24%  Similarity=0.261  Sum_probs=87.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      +..+|..||.|++|.|    +..++..++. .++..+   +..+|..+|.|+||.|+++||..++... ....+.+++..
T Consensus       727 ~~~~F~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~~---~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~  802 (863)
T 1sjj_A          727 FRASFNHFDRKKTGMMDCEDFRACLISMGY-NMGEAE---FARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMA  802 (863)
T ss_dssp             HHHHHTTTCSSSSSEEESTTHHHHHHHHTC-CCCTHH---HHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHH
T ss_pred             HHHHHHHHCCCCCCCcCHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHH
Confidence            8999999999999999    7777777776 566666   8999999999999999999999998764 33456678999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~  243 (547)
                      +|+.+ .|++|+|+.+||.+++..           ..+..++...|.
T Consensus       803 aF~~~-~d~~G~Is~~El~~~l~~-----------~~~~~l~~~~d~  837 (863)
T 1sjj_A          803 SFKIL-AGDKNYITVDELRRELPP-----------DQAEYCIARMAP  837 (863)
T ss_dssp             HHHGG-GTSSSEEEHHHHHHHSCH-----------HHHHHHHHHSEE
T ss_pred             HHHHH-hCCCCcCcHHHHHHHCCH-----------HHHHHHHHHcch
Confidence            99999 899999999999999831           246666666654

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=98.44  E-value=4.8e-07  Score=79.01  Aligned_cols=70  Identities=14%  Similarity=0.162  Sum_probs=62.9

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+.+++..++++|+.+|. ++|+|+-+|+..++...+  ++.+++.++++..|.|+||.|+++||..+|.-.
T Consensus        26 ~it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~sg--Lp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li   95 (121)
T 3fia_A           26 AITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQSG--LPQPVLAQIWALADMNNDGRMDQVEFSIAMKLI   95 (121)
T ss_dssp             CCCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGGGC--CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            4567777889999999998 899999999999998765  789999999999999999999999999988553

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=98.42  E-value=2.7e-07  Score=105.20  Aligned_cols=135  Identities=8%  Similarity=0.108  Sum_probs=86.4

Q ss_pred             CchhhHHHHHhcCCCcccceecccChHH-HHHHHH--hhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcC--
Q 008959           94 IWNSEKKLLLETNGPHVARISVFEDSDA-DSEVFD--LLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDY--  167 (547)
Q Consensus        94 ~Wne~~kll~e~~~~~~~~isl~e~~~e-l~~~F~--~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~--  167 (547)
                      .|-...+.++......      ...... ++++|.  .||.|++|.| ..++...+..   ...+   ++++++.+|.  
T Consensus       125 ~Wv~GL~~L~~~~~~~------~~~~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~---~~~e---v~~li~~~d~~~  192 (799)
T 2zkm_X          125 AWAEDVLALVKHPLTA------NASRSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA---DRKR---VEAALSACHLPK  192 (799)
T ss_dssp             HHHHHHHHHHHCTTGG------GCCHHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS---CHHH---HHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHhc------cccHHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh---hHHH---HHHHHHHhCcCc
Confidence            5776666666432211      111233 899999  8999999999 6666555432   2344   8889999884  


Q ss_pred             -----CCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh-hccCc-cc----ccchhHHH
Q 008959          168 -----NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ-QEKEP-LM----NCCPVCGE  236 (547)
Q Consensus       168 -----d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l-~~~~~-~~----~~~~~~~~  236 (547)
                           +++|.|+|+||..++..+.   ..++++++|+.||.|++|+||.+||.++|... ++... ++    .....|.+
T Consensus       193 ~~~D~d~~g~idf~EF~~~~~~l~---~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~  269 (799)
T 2zkm_X          193 GKNDAINPEDFPEPVYKSFLMSLC---PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQG  269 (799)
T ss_dssp             CTTCEECGGGCCHHHHHHHHHHHS---CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHH
T ss_pred             cccccCCCCcCCHHHHHHHHHHcc---CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHH
Confidence                 8889999999999998753   35789999999999999999999999999987 44310 00    01134777


Q ss_pred             HHhhhcc
Q 008959          237 TLEVADM  243 (547)
Q Consensus       237 ~l~~~D~  243 (547)
                      +|++.|.
T Consensus       270 iI~~~d~  276 (799)
T 2zkm_X          270 LIDKYEP  276 (799)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhhc
Confidence            7776654

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=98.40  E-value=7.5e-08  Score=81.44  Aligned_cols=86  Identities=17%  Similarity=0.162  Sum_probs=66.7

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh---hccC
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ---QEKE  225 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l---~~~~  225 (547)
                      .+++.+   ++.+|+.+|  ++|.|+++||..++...  ..+.++++.+|+.+|.|++|+|+.+||.+++..+   +...
T Consensus         5 ~~~~~e---~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (108)
T 2kyc_A            5 ILSPSD---IAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVL   77 (108)
T ss_dssp             SSCHHH---HHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCC
T ss_pred             cCCHHH---HHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCC
Confidence            567777   899999998  89999999999998422  2345689999999999999999999999999988   3333


Q ss_pred             cccccchhHHHHHhhhcccC
Q 008959          226 PLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       226 ~~~~~~~~~~~~l~~~D~~~  245 (547)
                      ..    ..+.+++...|..+
T Consensus        78 ~~----~~~~~~~~~~D~d~   93 (108)
T 2kyc_A           78 TA----SETKTFLAAADHDG   93 (108)
T ss_dssp             CT----TTTHHHHTTTCCSS
T ss_pred             CH----HHHHHHHHHhCCCC
Confidence            22    23556666665443

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=98.40  E-value=8.6e-07  Score=72.58  Aligned_cols=74  Identities=16%  Similarity=0.341  Sum_probs=59.2

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCc---chHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQ---VAANKK  194 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~---~~~eel  194 (547)
                      +..+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++......   ...+++
T Consensus        11 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~l   86 (92)
T 2kn2_A           11 LKEAFKVFDKDQNGYISASELRHVMINLGE-KLTDEE---VEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRL   86 (92)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred             HHHHHHHHCCCCCCeEcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCchHHHH
Confidence            8999999999999999    6667777764 566666   8999999999999999999999998774322   234667


Q ss_pred             HHHHH
Q 008959          195 EELFK  199 (547)
Q Consensus       195 ~~~F~  199 (547)
                      +.+|+
T Consensus        87 ~~aF~   91 (92)
T 2kn2_A           87 RRKFS   91 (92)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            76663

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=98.39  E-value=9.4e-08  Score=86.01  Aligned_cols=65  Identities=11%  Similarity=0.119  Sum_probs=28.6

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCC-----cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGN-----QVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-----~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ....|+.+|.|++|.|+++||..++..+..     ..+.++++.+|+.+|.|+||+|+++||..++..++
T Consensus        29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~   98 (143)
T 3a4u_B           29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVH   98 (143)
T ss_dssp             ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC---
T ss_pred             CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHH
Confidence            456899999999999999999998876421     24567899999999999999999999999997763

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=98.38  E-value=6.9e-07  Score=72.21  Aligned_cols=60  Identities=28%  Similarity=0.490  Sum_probs=51.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg  186 (547)
                      ++.+|..+|.|++|.|    +..++..++  .++..+   +..+|+.+|.|++|.|+++||..++....
T Consensus        13 l~~~F~~~D~d~~G~i~~~el~~~l~~~g--~~~~~~---~~~~~~~~D~~~dg~i~~~eF~~~~~~~~   76 (86)
T 2opo_A           13 RERIFKRFDTNGDGKISSSELGDALKTLG--SVTPDE---VRRMMAEIDTDGDGFISFDEFTDFARANR   76 (86)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTT--TCCHHH---HHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred             HHHHHHHHCCCCCCCcCHHHHHHHHHHcC--CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHCc
Confidence            8999999999999999    666666665  566666   89999999999999999999999997753

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=98.35  E-value=1.8e-06  Score=85.28  Aligned_cols=65  Identities=20%  Similarity=0.263  Sum_probs=59.5

Q ss_pred             HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ..++..+|+.||.|++|.|++.||..++..+.....+++++.+|+.+| |+||+|+.+|+..+++.
T Consensus       131 ~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~  195 (261)
T 1eg3_A          131 DMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHD  195 (261)
T ss_dssp             HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCceEeHHHHHHHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHH
Confidence            345677999999999999999999999999877778889999999999 99999999999999976

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=98.27  E-value=1.6e-06  Score=66.09  Aligned_cols=59  Identities=20%  Similarity=0.387  Sum_probs=50.1

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++..
T Consensus         3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~---~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            3 AKRVFEKFDKNKDGKLSLDEFREVALAFSP-YFTQED---IVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCT-TSCHHH---HHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            6789999999999999    6666666654 556666   899999999999999999999998864

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=98.22  E-value=1.2e-06  Score=68.98  Aligned_cols=59  Identities=22%  Similarity=0.395  Sum_probs=50.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++..
T Consensus         9 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            9 IKEAFDLFDTNKTGSIDYHELKVAMRALGF-DVKKPE---ILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHCCSSSSEEEHHHHHHHHHHHTC-CCHHHH---HHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            8899999999999999    6666776664 555555   899999999999999999999998854

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=98.20  E-value=1.3e-06  Score=69.09  Aligned_cols=60  Identities=22%  Similarity=0.380  Sum_probs=51.1

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +++.+|..+|.|++|.|    +..++..++  .++..+   +..+|+.+|.|++|.|+++||..++...
T Consensus         4 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~---~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            4 DMERIFKRFDTNGDGKISLSELTDALRTLG--STSADE---VQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHHHH--TCCHHH---HHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhC--CCCHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            37889999999999999    666666666  556666   8999999999999999999999998763

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=98.19  E-value=8.6e-07  Score=101.05  Aligned_cols=113  Identities=8%  Similarity=0.010  Sum_probs=71.0

Q ss_pred             cCCCcccceecccC-------hHHHHHHHHhhCC-------CCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCC
Q 008959          105 TNGPHVARISVFED-------SDADSEVFDLLDP-------SSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQ  169 (547)
Q Consensus       105 ~~~~~~~~isl~e~-------~~el~~~F~~~D~-------d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~  169 (547)
                      ...++.+.++..|.       +.++.++++.+|.       +++|.| +.+++..+.. ....++   ++++|+.||.++
T Consensus       157 fD~d~dG~Is~~EL~~~l~~~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~-l~~r~e---l~~aF~~fD~d~  232 (799)
T 2zkm_X          157 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMS-LCPRPE---IDEIFTSYHAKA  232 (799)
T ss_dssp             HSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHH-HSCCHH---HHTTCC------
T ss_pred             cCCCCCCeECHHHHHHHHhhhHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHH-ccCHHH---HHHHHHHhccCC
Confidence            35566777775443       3348888988885       788888 5544332211 112344   899999999999


Q ss_pred             CCcccHHHHHHHHHhc-CCc---------chHHHHHHHHHHhcCC----CCCCcCHHHHHHHHHhh
Q 008959          170 DGQLSFKEFSDLISAF-GNQ---------VAANKKEELFKAADKN----GDGVVSVDELAALLALQ  221 (547)
Q Consensus       170 dG~Is~~Ef~~~l~~l-g~~---------~~~eel~~~F~~~D~d----~dG~Is~~Ef~~~l~~l  221 (547)
                      +|.|+.+||..+|..+ |+.         +++++++++++.+|.|    ++|.|+++||.++|...
T Consensus       233 ~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~S~  298 (799)
T 2zkm_X          233 KPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGP  298 (799)
T ss_dssp             --CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHST
T ss_pred             CCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcccCc
Confidence            9999999999999986 665         6788999999999999    89999999999999763

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=98.19  E-value=2.7e-06  Score=69.39  Aligned_cols=59  Identities=24%  Similarity=0.442  Sum_probs=51.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++..
T Consensus        22 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~---~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           22 FKAAFDMFDADGGGDISTKELGTVMRMLGQ-NPTKEE---LDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            8999999999999999    6667777765 566666   899999999999999999999998865

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=98.17  E-value=4.2e-06  Score=69.38  Aligned_cols=61  Identities=18%  Similarity=0.374  Sum_probs=51.9

Q ss_pred             hHHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          119 SDADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      ..+++++|..+|.|++|.|    +..++..++. .++.++   ++.+|+.+|.|++|.|+++||..++.
T Consensus        28 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-~~~~~e---~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGE-KLTDEE---VDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             HHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTC-CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3449999999999999999    6667776664 566666   89999999999999999999999875

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=98.15  E-value=1.9e-06  Score=74.31  Aligned_cols=78  Identities=22%  Similarity=0.235  Sum_probs=52.2

Q ss_pred             HHHHHHhhCC-CCCc-hh----HHHHhh-hcCCC--C--CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDP-SSSN-KI----VGKISL-SCSVE--D--PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~-d~dG-~I----l~~ll~-~l~~~--~--~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      +.++|..||. |++| .|    +..++. .++..  .  .+..+   ++.+|+.+|.|+||.|+++||..++..+.    
T Consensus        14 l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~---v~~l~~~~D~d~dG~I~f~EF~~~~~~~~----   86 (113)
T 1xk4_C           14 IINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKV---IEHIMEDLDTNADKQLSFEEFIMLMARLT----   86 (113)
T ss_dssp             HHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHHHH----
T ss_pred             HHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHH---HHHHHHHhCCCCCCCEeHHHHHHHHHHHH----
Confidence            8899999995 9999 98    666665 45421  1  24444   89999999999999999999999997532    


Q ss_pred             HHHHHHHHHHhcCCCCCC
Q 008959          191 ANKKEELFKAADKNGDGV  208 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~  208 (547)
                       ..+.+.|...| +++|.
T Consensus        87 -~~~~~~f~~~~-~~~g~  102 (113)
T 1xk4_C           87 -WASHEKMHEGD-EGPGH  102 (113)
T ss_dssp             -HHHHC------------
T ss_pred             -HHHHHHHhhCC-CCCcc
Confidence             45677888888 88875

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=98.14  E-value=2.2e-06  Score=66.27  Aligned_cols=59  Identities=17%  Similarity=0.334  Sum_probs=50.1

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      +++.+|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++.
T Consensus         7 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (71)
T 2b1u_A            7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQ-PLPQEE---LDAMIREADVDQDGRVNYEEFARMLA   69 (71)
T ss_dssp             HHHHHHTTSCCSSSSEEEHHHHHHHGGGTTC-SSCHHH---HHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            38999999999999999    6666666654 556666   89999999999999999999999874

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.13  E-value=2.7e-06  Score=98.12  Aligned_cols=106  Identities=7%  Similarity=0.085  Sum_probs=81.1

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHh---hhcCCCCCChHHHHHHHHHHHhhcC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKIS---LSCSVEDPIETEKSFARRILSIVDY  167 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll---~~l~~~~~~~~e~~~l~~~f~~~D~  167 (547)
                      ..+.++.|.++..|+            +.++..+|..+|.|++|.| +.+++   ..........+.   +..+|+.+ .
T Consensus       733 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~---l~~aF~~~-~  808 (863)
T 1sjj_A          733 HFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQ---VMASFKIL-A  808 (863)
T ss_dssp             TTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHH---HHHHHHGG-G
T ss_pred             HHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHH---HHHHHHHH-h
Confidence            344556777776554            2338899999999999999 44443   332221233344   89999999 8


Q ss_pred             CCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCC-----CCCCcCHHHHHHHHHh
Q 008959          168 NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKN-----GDGVVSVDELAALLAL  220 (547)
Q Consensus       168 d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d-----~dG~Is~~Ef~~~l~~  220 (547)
                      |++|+|+.+||..++       +++++..+|+.+|.+     +||.|+|+||..+|..
T Consensus       809 d~~G~Is~~El~~~l-------~~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~  859 (863)
T 1sjj_A          809 GDKNYITVDELRREL-------PPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG  859 (863)
T ss_dssp             TSSSEEEHHHHHHHS-------CHHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred             CCCCcCcHHHHHHHC-------CHHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence            999999999999997       377899999999987     6999999999998843

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.13  E-value=2.6e-06  Score=70.46  Aligned_cols=57  Identities=19%  Similarity=0.303  Sum_probs=48.5

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.+|.|++|.|    +..++..++   .+..+   +..+|+.+|.|++|.|+++||..++..
T Consensus        11 ~~~~F~~~D~d~dG~I~~~el~~~l~~~g---~~~~~---~~~i~~~~D~d~dG~i~~~EF~~~~~~   71 (92)
T 1fi6_A           11 YVNQFKTIQPDLNGFIPGSAAKEFFTKSK---LPILE---LSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             HHHHHTTTCCSTTCEEEHHHHHHHHHHHS---SCHHH---HHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHcC---CCHHH---HHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            8899999999999999    666666664   34555   899999999999999999999998854

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=98.13  E-value=6.2e-06  Score=94.38  Aligned_cols=160  Identities=11%  Similarity=0.133  Sum_probs=105.3

Q ss_pred             CCceEEEEEcccce-Eeee--e-cCCCCCCCchhhHHHHHhcCCCcccceecccChHH-HHHHHHh--hCCCCCchh-HH
Q 008959           68 KDKWLACVSLGEQT-CRTA--I-SDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDA-DSEVFDL--LDPSSSNKI-VG  139 (547)
Q Consensus        68 ~dd~~~~v~~g~~~-frT~--v-i~~tLnP~Wne~~kll~e~~~~~~~~isl~e~~~e-l~~~F~~--~D~d~dG~I-l~  139 (547)
                      .+.|+.++.-+... .++-  | -....-..|....+.+......      ....... ++++|..  +|.|+||.| +.
T Consensus        99 e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~~~~------~~~~~~~~L~kaf~~~~~D~n~dGkIs~k  172 (885)
T 3ohm_B           99 EEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNILA------QNASRNTFLRKAYTKLKLQVNQDGRIPVK  172 (885)
T ss_dssp             CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHCHHH------HTCCHHHHHHHHHHHHHHSCCTTSCEEHH
T ss_pred             cccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhhhhh------cccCHHHHHHHHHHHhcCccCCCCccCHH
Confidence            35566666654321 1111  1 1223333687766666632110      0011233 8889987  899999999 66


Q ss_pred             HHhhhcCCCCCChHHHHHHHHHHHhhcCC-------CCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHH
Q 008959          140 KISLSCSVEDPIETEKSFARRILSIVDYN-------QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVD  212 (547)
Q Consensus       140 ~ll~~l~~~~~~~~e~~~l~~~f~~~D~d-------~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~  212 (547)
                      ++...+..   ...   .++.+|+.+|.+       ++|.|+++||..++..+.   ...+++++|+.+|.+++|.||.+
T Consensus       173 el~~~l~~---~~~---~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~---~R~EI~eiF~~ydsd~~g~mT~~  243 (885)
T 3ohm_B          173 NILKMFSA---DKK---RVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLC---LRPDIDKILLEIGAKGKPYLTLE  243 (885)
T ss_dssp             HHHHTTGG---GHH---HHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHS---CCHHHHHHHHHTTCCSTTCEEHH
T ss_pred             HHHHHHhc---CHH---HHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHHHHhcCCCCccCHH
Confidence            66654432   233   388899999987       889999999999998765   35689999999999999999999


Q ss_pred             HHHHHHHhhhccC-c-cc----ccchhHHHHHhhhc
Q 008959          213 ELAALLALQQEKE-P-LM----NCCPVCGETLEVAD  242 (547)
Q Consensus       213 Ef~~~l~~l~~~~-~-~~----~~~~~~~~~l~~~D  242 (547)
                      ||.++|.+.+... . ++    .....|.++|.+.+
T Consensus       244 EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e  279 (885)
T 3ohm_B          244 QLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYE  279 (885)
T ss_dssp             HHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcCcccccccccccCCHHHHHHHHHHhc
Confidence            9999999986321 1 10    11235777776544

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=98.13  E-value=2.6e-06  Score=72.20  Aligned_cols=60  Identities=15%  Similarity=0.248  Sum_probs=49.4

Q ss_pred             HHHHHHhhC-CCCC-chh----HHHHhhh-cC---CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSS-NKI----VGKISLS-CS---VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~d-G~I----l~~ll~~-l~---~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.++|+.|| .|++ |.|    +..++.. ++   ...+++++   +.++++.+|.|+||.|+|+||..++..
T Consensus        12 l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~e---v~~~i~~~D~dgDG~Idf~EF~~~~~~   81 (101)
T 3nso_A           12 IVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECD---YNKFMSVLDTNKDCEVDFVEYVRSLAC   81 (101)
T ss_dssp             HHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHH---HHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHH---HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            889999997 8997 999    6666654 32   23556666   999999999999999999999998865

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=98.12  E-value=7.2e-07  Score=68.08  Aligned_cols=58  Identities=16%  Similarity=0.255  Sum_probs=46.2

Q ss_pred             HHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          123 SEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       123 ~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.+|..+|.|++|.|    +..++..++. .++..+   ++.+|+.+|.|++|.|+++||..++..
T Consensus         3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~---~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A            3 EALFKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQL---LQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             CHHHHHHCTTCSSSCCHHHHHHHHHHHHH-HHHHHH---HHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHHHccC-CCcHHH---HHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            468999999999999    5555555542 233334   899999999999999999999998864

>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}

Probab=98.12  E-value=1.7e-06  Score=79.34  Aligned_cols=54  Identities=20%  Similarity=0.172  Sum_probs=45.3

Q ss_pred             ccceeEEEEEEeecc-cc---------------cCCceEEEEEcccce-EeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE-MK---------------FKDKWLACVSLGEQT-CRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~-~~---------------~~dd~~~~v~~g~~~-frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ....|+|+|+|++|+ +.               +.+||||++.++++. .||+++++++||+|||.+.+.+
T Consensus        25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v   95 (157)
T 2fk9_A           25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANV   95 (157)
T ss_dssp             CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEE
T ss_pred             ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEc
Confidence            367899999999995 21               458999999998875 7999999999999999766544

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=98.11  E-value=6e-06  Score=66.61  Aligned_cols=67  Identities=12%  Similarity=0.022  Sum_probs=54.1

Q ss_pred             ccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          116 FEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      .+.+.+ ++.+|..||.|++|.|    +..++..++. .++..+...+..+|..+|.|++|.|++ ||..++..
T Consensus         9 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A            9 GPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQ-TYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             SSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSC-CCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            344444 8999999999999999    6677777775 555555444788999999999999999 99998865

>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1

Probab=98.11  E-value=2.6e-06  Score=75.19  Aligned_cols=58  Identities=17%  Similarity=0.218  Sum_probs=49.1

Q ss_pred             ccccccceeEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           46 VLNEEDFAGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        46 ~~~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ++.-....|.|+|+|++|+      ..+++|||+++.++.+.+||+++++++||+|||.+.+.+
T Consensus         5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~   68 (133)
T 2ep6_A            5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPI   68 (133)
T ss_dssp             CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEE
T ss_pred             cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEe
Confidence            3444567899999999995      357889999999999999999999999999999655544

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.10  E-value=3.6e-06  Score=72.35  Aligned_cols=64  Identities=22%  Similarity=0.260  Sum_probs=50.5

Q ss_pred             cccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          115 VFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       115 l~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.+.+.+ ++++|+.||.|++|.|    +..++..++   .+.++   +.++|+.+|.|++|.|+++||..++..
T Consensus        16 ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g---l~~~e---l~~i~~~~D~d~dG~I~~~EF~~~m~~   84 (110)
T 1iq3_A           16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK---LSIPE---LSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             CSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS---CSSCC---HHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC---CCHHH---HHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            3444444 9999999999999999    455554443   44555   889999999999999999999998854

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=98.09  E-value=3.4e-06  Score=72.53  Aligned_cols=57  Identities=21%  Similarity=0.311  Sum_probs=47.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.||.|++|.|    +..++.   ....+..+   +..+|+.+|.|++|.|+++||..++..
T Consensus        16 l~~~F~~~D~d~dG~I~~~El~~~l~---~~~~~~~~---~~~i~~~~D~d~dG~I~~~EF~~~~~~   76 (111)
T 2kgr_A           16 YRQLFNSHDKTMSGHLTGPQARTILM---QSSLPQAQ---LASIWNLSDIDQDGKLTAEEFILAMHL   76 (111)
T ss_dssp             HHHHHHTTSCSSCCEEEHHHHHHHHH---TTCCCHHH---HHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHH---hCCCCHHH---HHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            8999999999999999    444444   33556666   899999999999999999999998854

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=98.09  E-value=2.5e-06  Score=71.04  Aligned_cols=57  Identities=25%  Similarity=0.211  Sum_probs=48.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|..+|.|++|.|    +..++..++   .+..+   ++.+|+.+|.|++|.|+++||..++..
T Consensus        12 ~~~~F~~~D~d~dG~I~~~el~~~l~~~g---~~~~~---~~~i~~~~D~d~dG~i~~~EF~~~~~~   72 (95)
T 1c07_A           12 YDEIFLKTDKDMDGFVSGLEVREIFLKTG---LPSTL---LAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHTTT---CCHHH---HHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHHHcC---CCHHH---HHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            8999999999999999    555555553   44555   899999999999999999999998854

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=98.08  E-value=3.3e-06  Score=67.28  Aligned_cols=63  Identities=21%  Similarity=0.283  Sum_probs=50.5

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG  186 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg  186 (547)
                      .+++ +|..+|.|++|.|    +..++..++...++..+   +..+|+.+|.|++|.|+++||..++....
T Consensus         9 ~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~---~~~~~~~~D~~~dg~i~~~eF~~~~~~~~   75 (81)
T 1c7v_A            9 EILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAE---VEEAMKEADEDGNGVIDIPEFMDLIKKSK   75 (81)
T ss_dssp             HHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHH---HHHHHHHHCSSGGGSEEHHHHHHHHHCC-
T ss_pred             HHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence            3388 9999999999999    55555555512456666   89999999999999999999999987643

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=98.07  E-value=3.5e-06  Score=70.90  Aligned_cols=59  Identities=12%  Similarity=0.181  Sum_probs=49.7

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      .+++++|+.+|.|++|.|    +..++..++   .+.++   +.++|+.+|.|++|.|+++||..++..
T Consensus        11 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~---l~~~~---l~~i~~~~D~d~dG~i~~~EF~~~~~~   73 (99)
T 1qjt_A           11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSG---LPDLI---LGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             THHHHHHHHHCCTTSSCCCSHHHHHHHHTSS---SCHHH---HHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC---CCHHH---HHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            448999999999999999    666666553   44555   899999999999999999999999864

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=98.07  E-value=7.2e-06  Score=70.86  Aligned_cols=59  Identities=17%  Similarity=0.316  Sum_probs=49.0

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|..|| .|++| .|    +..++..     ++. .+++++   +..+++.+|.|+||.|+|+||..++..
T Consensus        24 l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~-~~t~~e---v~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           24 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK-RTDEAA---FQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTT-CCCTTH---HHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCC-CCCHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            899999999 89997 88    6666654     332 456666   899999999999999999999998864

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=98.07  E-value=4e-06  Score=68.91  Aligned_cols=57  Identities=19%  Similarity=0.341  Sum_probs=48.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|+.+|.|++|.|    +..++..++   .+..+   ++.+|+.+|.|++|.|+++||..++..
T Consensus        29 l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~---~~~~~~~~D~d~dg~I~~~EF~~~~~~   89 (91)
T 2pmy_A           29 LRSVFAACDANRSGRLEREEFRALCTELR---VRPAD---AEAVFQRLDADRDGAITFQEFARGFLG   89 (91)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHHHTT---CCHHH---HHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred             HHHHHHHHCCCCCCCCcHHHHHHHHHHcC---cCHHH---HHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            8999999999999999    555666654   34555   899999999999999999999998865

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=98.06  E-value=4.4e-06  Score=65.42  Aligned_cols=62  Identities=19%  Similarity=0.319  Sum_probs=51.3

Q ss_pred             HHHHHHHHhh-CCCCC-chh----HHHHhhhcCCCCC--ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          120 DADSEVFDLL-DPSSS-NKI----VGKISLSCSVEDP--IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       120 ~el~~~F~~~-D~d~d-G~I----l~~ll~~l~~~~~--~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      .+++.+|..+ |.|++ |.|    +..++..++. .+  +..+   +..+|+.+|.|++|.|+++||..++..+
T Consensus         5 ~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~-~~~~~~~~---~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A            5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP-SLLKGMST---LDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG-GSCTTSCS---HHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC-CcCCCHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            3488999999 99999 999    6666666654 44  5555   8899999999999999999999998754

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=98.05  E-value=5.1e-06  Score=68.66  Aligned_cols=59  Identities=17%  Similarity=0.312  Sum_probs=48.9

Q ss_pred             HHHHHHhhCCCCCc---hh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPSSSN---KI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG---~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +.++|+.|| +++|   .|    +..++..     ++. .++..+   +..+|+.+|.|+||.|+++||..++..+
T Consensus        11 l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~-~~~~~~---v~~~~~~~D~d~dG~I~f~EF~~~~~~l   81 (92)
T 3rm1_A           11 LIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEE-IKEQEV---VDKVMETLDSNGDGECDFQEFMAFVAMI   81 (92)
T ss_dssp             HHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCC-CCSHHH---HHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccC-cccHHH---HHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            889999999 7777   88    6666666     553 556666   8999999999999999999999998753

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.04  E-value=3.9e-06  Score=67.06  Aligned_cols=61  Identities=16%  Similarity=0.316  Sum_probs=48.5

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCC-CCCChHHHHHHHH----HHHhhcCCCCCcccHHHHHHHHHh
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSV-EDPIETEKSFARR----ILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~-~~~~~~e~~~l~~----~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      .+..+|..+|.|++|.|    +..++..++. ..++..+   +..    +|+.+|.|++|.|+++||...+..
T Consensus         8 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~   77 (83)
T 1yx7_A            8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDK---VKEASAKLIKMADKNSDGKISKEEFLNANAE   77 (83)
T ss_dssp             HHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTT---THHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHH---HHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence            38999999999999999    6666666651 2444444   556    999999999999999999987654

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=98.03  E-value=5.1e-06  Score=69.10  Aligned_cols=60  Identities=17%  Similarity=0.299  Sum_probs=47.2

Q ss_pred             HHHHHHhhC-CCCC-chh----HHHHhhh-cCC---CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSS-NKI----VGKISLS-CSV---EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~d-G~I----l~~ll~~-l~~---~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.++|+.|| .||+ |.|    +..++.. ++.   ..+++.+   ++++++.+|.|+||.|+|+||..++..
T Consensus        12 l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~e---v~~~i~~~D~d~DG~Idf~EF~~~~~~   81 (93)
T 4eto_A           12 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAA---FQKLMSNLDSNRDNEVDFQEYCVFLSC   81 (93)
T ss_dssp             HHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHH---HHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHH---HHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            889999997 6885 788    6666654 431   2345555   999999999999999999999999875

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=98.00  E-value=8.5e-06  Score=69.33  Aligned_cols=60  Identities=17%  Similarity=0.290  Sum_probs=48.1

Q ss_pred             HHHHHHhhC-CCCC-chh----HHHHhhh-cC---CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSS-NKI----VGKISLS-CS---VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~d-G~I----l~~ll~~-l~---~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.++|..|| .|++ |.|    +..++.. ++   ...+++.+   +.++++.+|.|+||.|+|+||..++..
T Consensus        15 l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~e---v~~~i~~~D~dgDG~Idf~EF~~~m~~   84 (104)
T 3zwh_A           15 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAA---FQKLMSNLDSNRDNEVDFQEYCVFLSS   84 (104)
T ss_dssp             HHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHH---HHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            899999997 6775 788    6666654 43   12345666   999999999999999999999999875

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=97.98  E-value=3e-06  Score=72.35  Aligned_cols=61  Identities=16%  Similarity=0.177  Sum_probs=47.9

Q ss_pred             HHHHHHhhC-CCCC-chh----HHHHhhh-cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLD-PSSS-NKI----VGKISLS-CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D-~d~d-G~I----l~~ll~~-l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++++|..|| .|++ |.|    +..++.. ++...+++.+   +..+++.+|.|+||.|+|+||..++...
T Consensus        24 l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~e---v~~li~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           24 VVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGS---LDEKMKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             HHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCC---HHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHH---HHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            899999999 7987 788    6666654 4422222344   8899999999999999999999998653

>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2

Probab=97.98  E-value=3.2e-06  Score=74.74  Aligned_cols=54  Identities=15%  Similarity=0.178  Sum_probs=46.7

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcccceEeeeecC-CCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISD-NTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~-~tLnP~Wne~~kll~  103 (547)
                      ....|.|+|+|++|+      ..++.|||+++.++.+.+||++++ +++||+|||.+.+.+
T Consensus         6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v   66 (136)
T 1wfj_A            6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTV   66 (136)
T ss_dssp             CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEE
T ss_pred             CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEE
Confidence            345799999999995      346789999999999999999998 899999999766655

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=97.98  E-value=5e-06  Score=65.41  Aligned_cols=63  Identities=16%  Similarity=0.258  Sum_probs=50.1

Q ss_pred             HHHHHHHHhhCC-CCCc-hh----HHHHhhh-cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          120 DADSEVFDLLDP-SSSN-KI----VGKISLS-CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       120 ~el~~~F~~~D~-d~dG-~I----l~~ll~~-l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      .+++.+|..+|. |++| .|    +..++.. ++...++..+   ++.+|+.+|.|++|.|+++||..++..+
T Consensus         7 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~---~~~~~~~~D~~~dg~i~~~eF~~~~~~~   76 (78)
T 1cb1_A            7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRT---LDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCC---SSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHH---HHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence            348999999999 9999 88    6666654 5432225555   7889999999999999999999998754

>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.97  E-value=3.4e-06  Score=74.95  Aligned_cols=52  Identities=23%  Similarity=0.274  Sum_probs=45.1

Q ss_pred             ceeEEEEEEeecc-c----ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           52 FAGIALLTLISAE-M----KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        52 ~~gi~~i~~~~A~-~----~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ..|.|+|+|++|+ +    .++.|||+++.++.+.+||+++++++||+|||.+.+.+
T Consensus         5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v   61 (140)
T 2dmh_A            5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDL   61 (140)
T ss_dssp             BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEEC
T ss_pred             CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEe
Confidence            4689999999995 1    16789999999999999999999999999999665554

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=97.96  E-value=1.2e-05  Score=67.83  Aligned_cols=65  Identities=23%  Similarity=0.244  Sum_probs=49.5

Q ss_pred             HHHHHHhhCCCC---Cchh----HHHHhhhcCCCCCC-hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC
Q 008959          122 DSEVFDLLDPSS---SNKI----VGKISLSCSVEDPI-ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG  186 (547)
Q Consensus       122 l~~~F~~~D~d~---dG~I----l~~ll~~l~~~~~~-~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg  186 (547)
                      ++++|+.||.++   +|.|    +..++..+....++ ......+..+++.+|.|+||.|+|+||..++..+.
T Consensus        13 l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~   85 (100)
T 3nxa_A           13 LVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT   85 (100)
T ss_dssp             HHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            899999999964   7999    66666654332232 11123499999999999999999999999997644

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=97.94  E-value=8.8e-06  Score=67.77  Aligned_cols=59  Identities=19%  Similarity=0.280  Sum_probs=45.1

Q ss_pred             HHHHHHhhC-CCC-Cchh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSS-SNKI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~-dG~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.|| .|+ +|.|    +..++..     ++. .+++.+   +..+++.+|.|+||.|+++||..++..
T Consensus        11 l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~-~~~~~~---v~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (95)
T 1j55_A           11 IIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQS-GKDKDA---VDKLLKDLDANGDAQVDFSEFIVFVAA   80 (95)
T ss_dssp             HHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC-------CH---HHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhccc-ccCHHH---HHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            889999999 788 4788    6666654     222 344555   899999999999999999999999865

>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2

Probab=97.94  E-value=6.7e-06  Score=73.20  Aligned_cols=54  Identities=15%  Similarity=0.067  Sum_probs=45.1

Q ss_pred             ccceeEEEEEEeecc---cccCCceEEEEEcc----cceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE---MKFKDKWLACVSLG----EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~---~~~~dd~~~~v~~g----~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.-.|.|+|+|++|+   ..++.|||+++.+.    .+.+||+++++++||+|||.+..-+
T Consensus        22 ~~~~~~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v   82 (138)
T 1wfm_A           22 DCQKAELFVTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPL   82 (138)
T ss_dssp             ETTTTEEEEEEEEEECCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEEC
T ss_pred             eCCCCEEEEEEEEEEcCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEe
Confidence            666899999999995   46788999999983    3479999999999999999665544

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=97.93  E-value=1.5e-05  Score=66.96  Aligned_cols=59  Identities=20%  Similarity=0.291  Sum_probs=48.5

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.|| .|++| .|    +..++..     ++. .+++.+   +..+++.+|.|+||.|+|+||..++..
T Consensus        12 l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~-~~~~~~---v~~l~~~~D~d~dG~I~f~EF~~~~~~   81 (99)
T 2y5i_A           12 LITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMS-QKDPML---VEKIMNDLDSNKDNEVDFNEFVVLVAA   81 (99)
T ss_dssp             HHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTT-SCCHHH---HHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccc-cccHHH---HHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            899999997 89997 88    6666654     332 456666   899999999999999999999999865

>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*

Probab=97.92  E-value=5.9e-06  Score=74.18  Aligned_cols=54  Identities=15%  Similarity=0.225  Sum_probs=45.6

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ....|.|+|+|++|+      ..++.|||+++.++.+.+||+++++++||+||+.+.+.+
T Consensus        13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v   72 (148)
T 3kwu_A           13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFEC   72 (148)
T ss_dssp             --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEE
T ss_pred             cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEe
Confidence            345799999999995      356889999999999999999999999999999655433

>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1

Probab=97.92  E-value=4.4e-06  Score=72.71  Aligned_cols=51  Identities=16%  Similarity=0.191  Sum_probs=43.8

Q ss_pred             eeEEEEEEeecc-c--------ccCCceEEEEEccc---ceEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE-M--------KFKDKWLACVSLGE---QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~-~--------~~~dd~~~~v~~g~---~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      .|.|+|+|++|+ +        .++.|||+++.++.   +.+||+++++++||+|||.+.+.+
T Consensus         2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v   64 (126)
T 1rlw_A            2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFIL   64 (126)
T ss_dssp             CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEE
T ss_pred             CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEe
Confidence            489999999995 2        26789999999995   899999999999999999666554

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=97.92  E-value=1.3e-05  Score=67.13  Aligned_cols=61  Identities=20%  Similarity=0.262  Sum_probs=51.8

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      .+++.+|..||.|++|.|    +..++..++. .++..+   +..+|..+|.|++|.|+++||..++..
T Consensus        24 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~e---~~~l~~~~d~~~~g~i~~~eF~~~~~~   88 (105)
T 1wlz_A           24 HAITQEFENFDTMKTNTISREEFRAICNRRVQ-ILTDEQ---FDRLWNEMPVNAKGRLKYPDFLSRFSS   88 (105)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTC-CCCHHH---HHHHHTTSCBCTTSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence            348999999999999999    6667776664 566666   899999999999999999999999864

>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1

Probab=97.92  E-value=4.7e-06  Score=77.51  Aligned_cols=53  Identities=23%  Similarity=0.330  Sum_probs=44.8

Q ss_pred             cceeEEEEEEeecc-c-----ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           51 DFAGIALLTLISAE-M-----KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        51 ~~~gi~~i~~~~A~-~-----~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      .-.|.|+|+|++|+ +     .++.||||++.++.+.+||+++++++||+|||.+.+.+
T Consensus        33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v   91 (173)
T 2nq3_A           33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIV   91 (173)
T ss_dssp             SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEE
T ss_pred             CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEe
Confidence            34688999999995 2     23589999999999999999999999999999665544

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=97.90  E-value=1.6e-05  Score=67.10  Aligned_cols=60  Identities=13%  Similarity=0.215  Sum_probs=52.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++.+|..+|.|++|.|    +..++..++. .++..+   +..+|..+|.|++|.|+++||..++...
T Consensus        34 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~~---~~~l~~~~D~d~dg~i~~~eF~~~~~~~   97 (107)
T 2d58_A           34 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGV-PKTHLE---LKKLIGEVSSGSGETFSYPDFLRMMLGK   97 (107)
T ss_dssp             HHHHHTTSCCCTTSCEEHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence            8999999999999999    6667777765 566666   8999999999999999999999998653

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=97.89  E-value=5.8e-06  Score=68.87  Aligned_cols=59  Identities=19%  Similarity=0.232  Sum_probs=48.2

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.|| .|++| .|    +..++..     ++. .+++.+   ++.+++.+|.|+||.|+|+||..++..
T Consensus        14 l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~-~~~~~~---v~~~~~~~D~d~dG~I~f~EF~~~~~~   83 (95)
T 2wcb_A           14 IVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKN-IKDKAV---IDEIFQGLDANQDEQVDFQEFISLVAI   83 (95)
T ss_dssp             HHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHH-CCCHHH---HHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccc-cccHHH---HHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            899999999 89998 88    5555554     232 455666   899999999999999999999999864

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=97.89  E-value=1.4e-05  Score=68.23  Aligned_cols=56  Identities=23%  Similarity=0.318  Sum_probs=47.8

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.+|. ++|.|    +..++..++   .+.++   +.++|+.+|.|+||.|+++||..++..
T Consensus        17 ~~~~F~~~D~-~dG~Is~~el~~~l~~~g---l~~~e---l~~i~~~~D~d~dG~id~~EF~~~m~~   76 (106)
T 1eh2_A           17 YDAIFDSLSP-VNGFLSGDKVKPVLLNSK---LPVDI---LGRVWELSDIDHDGMLDRDEFAVAMFL   76 (106)
T ss_dssp             HHHHHTTSCC-SSSCCBHHHHHHHHHTTT---CCHHH---HHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred             HHHHHHHhCC-CCCeEcHHHHHHHHHHcC---CCHHH---HHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            8999999999 99999    666666554   45555   899999999999999999999998854

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=97.88  E-value=1.2e-05  Score=65.73  Aligned_cols=59  Identities=24%  Similarity=0.372  Sum_probs=49.9

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|..+| .|++| .|    +..++..     ++. .++..+   ++.+|+.+|.|++|.|+++||..++..
T Consensus        11 l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~-~~~~~~---~~~~~~~~D~d~dg~i~~~eF~~~~~~   80 (93)
T 1k2h_A           11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDV-QKDADA---VDKIMKELDENGDGEVDFQEFVVLVAA   80 (93)
T ss_dssp             HHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHC-CCCHHH---HHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            889999999 79999 98    5666665     554 566666   899999999999999999999999865

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=97.87  E-value=5.1e-06  Score=67.02  Aligned_cols=57  Identities=19%  Similarity=0.391  Sum_probs=48.5

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++
T Consensus        25 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~---~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           25 LKELFKMIDTDNSGTITFDELKDGLKRVGS-ELMESE---IKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTHHHHHCTTCSSCEEHHHHHHHHHTTTS-SCCHHH---HHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            7889999999999999    6666666664 566666   8999999999999999999998654

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=97.84  E-value=2e-05  Score=70.54  Aligned_cols=57  Identities=25%  Similarity=0.261  Sum_probs=48.5

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +++++|+.|| |++|+|    +..++..++   ++..+   +.++|+..|.|+||.|+++||..+|..
T Consensus        52 ~l~~~F~~fD-d~dG~Is~~El~~~l~~~g---l~~~e---l~~I~~~~D~d~dG~Ld~~EF~~am~l  112 (139)
T 2jq6_A           52 TYDEIFYTLS-PVNGKITGANAKKEMVKSK---LPNTV---LGKIWKLADVDKDGLLDDEEFALANHL  112 (139)
T ss_dssp             HHHHHHHHSC-CSSSEEEHHHHHHHHHHTT---CCHHH---HHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHhC-CCCCeECHHHHHHHHHHhC---cCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3999999999 999999    666666643   45666   999999999999999999999998854

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=97.84  E-value=1.4e-05  Score=66.00  Aligned_cols=61  Identities=16%  Similarity=0.281  Sum_probs=48.7

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhhcCC-CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLSCSV-EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~l~~-~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +.++|..|| .|++| .|    +..++..... ..+++.+   ++.+|+.+|.|++|.|+++||..++..+
T Consensus        12 l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~---i~~~~~~~D~d~dG~I~f~EF~~~~~~~   79 (92)
T 2kax_A           12 MVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESS---IDDLMKSLDKNSDQEIDFKEYSVFLTML   79 (92)
T ss_dssp             HHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTT---HHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            889999999 99999 98    5566654211 0155555   8899999999999999999999998653

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=97.80  E-value=2.2e-05  Score=89.31  Aligned_cols=89  Identities=22%  Similarity=0.238  Sum_probs=71.2

Q ss_pred             hhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhh-------cCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH
Q 008959          128 LLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIV-------DYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK  199 (547)
Q Consensus       128 ~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~-------D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~  199 (547)
                      .+|.|+||.| +.++...+.. .  ..+...+.++++..       |.+++|.|+|+||..++..+.   ..++++++|+
T Consensus       163 ~fd~n~dG~Is~kEl~~~l~~-~--~~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF~  236 (816)
T 3qr0_A          163 TTVEMEKNKIPVKAIQKCLSK-D--KDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIFK  236 (816)
T ss_dssp             HHTSCCSSEEEHHHHHHHHCS-C--HHHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHHH
T ss_pred             hccCCCCCCCCHHHHHHHHHh-c--CChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHH
Confidence            5799999999 6665554432 1  11223477888887       678899999999999998864   3468999999


Q ss_pred             HhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          200 AADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       200 ~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      .+|.|++|.||. ||.++|.+.+.
T Consensus       237 ~y~~dg~~~mT~-eL~~FL~~~Q~  259 (816)
T 3qr0_A          237 ELSKNKGNITTV-MFRDFLNDMQR  259 (816)
T ss_dssp             HHTTTSSSEEHH-HHHHHHHHTSS
T ss_pred             HHccCCCCcccH-HHHHHHHHhCC
Confidence            999999999999 99999999863

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=97.79  E-value=5.6e-06  Score=74.72  Aligned_cols=62  Identities=21%  Similarity=0.302  Sum_probs=54.6

Q ss_pred             HHHHHHHhhcCC-CCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          157 FARRILSIVDYN-QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       157 ~l~~~f~~~D~d-~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+.-+|..+|.| +||.|+..|+..++..+.  .++..++.+|+.+|.|+||.||++||...+..
T Consensus        78 ~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg~  140 (151)
T 1sra_A           78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  140 (151)
T ss_dssp             HHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred             HHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhCC
Confidence            388899999997 999999999999886553  56667999999999999999999999998844

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=97.78  E-value=1.8e-05  Score=64.12  Aligned_cols=59  Identities=15%  Similarity=0.329  Sum_probs=49.0

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhh---cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLS---CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~---l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..+| .|++| .|    +..++..   ++. .++..+   ++.+|+.+|.|++|.|+++||..++..
T Consensus        12 l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~-~~~~~~---~~~~~~~~D~~~dg~i~~~eF~~~~~~   79 (90)
T 1k8u_A           12 LVAIFHKYSGREGDKHTLSKKELKELIQKELTIGS-KLQDAE---IARLMEDLDRNKDQEVNFQEYVTFLGA   79 (90)
T ss_dssp             HHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGG-GTTSHH---HHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCC-CCCHHH---HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            889999999 59999 88    6666665   553 455555   899999999999999999999998865

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=97.72  E-value=1.4e-05  Score=65.87  Aligned_cols=59  Identities=19%  Similarity=0.214  Sum_probs=46.9

Q ss_pred             HHHHHHhhCC-CCCc-hh----HHHHh-hhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDP-SSSN-KI----VGKIS-LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~-d~dG-~I----l~~ll-~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..||. |++| .|    +..++ ..++. .++..+   +..+|+.+|.|++|.|+++||..++..
T Consensus        12 l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~-~~~~~~---~~~l~~~~D~d~dG~I~~~EF~~~~~~   77 (93)
T 1xk4_A           12 IIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQ-YIRKKG---ADVWFKELDINTDGAVNFQEFLILVIK   77 (93)
T ss_dssp             HHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCH-HHHTTC---HHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcc-cCCHHH---HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            8899999999 9999 98    55555 44432 222333   788999999999999999999999865

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=97.71  E-value=5.4e-05  Score=63.54  Aligned_cols=62  Identities=19%  Similarity=0.217  Sum_probs=47.1

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhh----c-CCCCCCh--------HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLS----C-SVEDPIE--------TEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~----l-~~~~~~~--------~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|..||.|++|.|    +..++..    + +. .++.        .....+..+|+.+|.|+||.|+++||..++..
T Consensus        22 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~-~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  100 (103)
T 1snl_A           22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDP-KNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR  100 (103)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCC-SSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhcc-CCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence            8899999999999999    5555553    2 32 2222        11234888999999999999999999998753

>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}

Probab=97.70  E-value=2.1e-05  Score=72.94  Aligned_cols=52  Identities=17%  Similarity=0.187  Sum_probs=44.7

Q ss_pred             cceeEEEEEEeecc------cccCCceEEEEEccc------ceEeeeecCCCCCCCchhhHHHH
Q 008959           51 DFAGIALLTLISAE------MKFKDKWLACVSLGE------QTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        51 ~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~------~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +-.|+|+|+|++|+      ..+++||||++.++.      +.+||+++++++||+||+.+.+.
T Consensus         5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~   68 (176)
T 3m7f_B            5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFR   68 (176)
T ss_dssp             TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEE
T ss_pred             CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEE
Confidence            45799999999995      357899999999987      78999999999999999965443

>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2

Probab=97.69  E-value=1.9e-05  Score=68.90  Aligned_cols=52  Identities=15%  Similarity=0.184  Sum_probs=44.3

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.|.|.|+|++|+      ..++.|||+++.+     +.+.+||+++++++||+|||.+..
T Consensus        14 ~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f   76 (129)
T 2bwq_A           14 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIY   76 (129)
T ss_dssp             ETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEE
T ss_pred             ccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEE
Confidence            455689999999995      3566899999998     789999999999999999995544

>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}

Probab=97.68  E-value=2.2e-05  Score=69.52  Aligned_cols=55  Identities=16%  Similarity=0.118  Sum_probs=45.8

Q ss_pred             cccccceeEEEEEEeecc-----cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHH
Q 008959           47 LNEEDFAGIALLTLISAE-----MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        47 ~~~~~~~gi~~i~~~~A~-----~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ++.+.-.|.|.|+|++|+     ..+.+|||+++.+     +.+.+||+++++++||+|||.+..
T Consensus        13 ~~~~~~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f   77 (134)
T 2b3r_A           13 LSVSYRNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVY   77 (134)
T ss_dssp             EEEEEETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEE
T ss_pred             EEEeecCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEE
Confidence            344556799999999995     3567899999998     678999999999999999995544

>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.67  E-value=4.1e-05  Score=68.02  Aligned_cols=51  Identities=12%  Similarity=0.118  Sum_probs=43.4

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcc---cceEeeeecCCCCCCCchhhHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~k  100 (547)
                      ..-.|.|+|+|++|+      ..++.|||+++.+.   .+.+||+++++++||+|||.+.
T Consensus        22 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~   81 (141)
T 2d8k_A           22 NFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFL   81 (141)
T ss_dssp             CSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEE
T ss_pred             eCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEE
Confidence            556799999999995      35678999999993   6799999999999999999554

>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.65  E-value=3.8e-05  Score=68.78  Aligned_cols=52  Identities=13%  Similarity=0.220  Sum_probs=43.5

Q ss_pred             ccceeEEEEEEeecc-cc------------cCCceEEEEEcc---cceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE-MK------------FKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~-~~------------~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.|.|+|+|++|+ +.            ++.|||+++.++   .+.+||+++++++||+|||.+..
T Consensus        22 ~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f   89 (147)
T 2enp_A           22 DLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTF   89 (147)
T ss_dssp             ETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEE
T ss_pred             cCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEE
Confidence            667899999999995 21            368999999987   57999999999999999995444

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=97.64  E-value=5.7e-05  Score=62.44  Aligned_cols=60  Identities=25%  Similarity=0.319  Sum_probs=47.3

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhh-hcC---CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISL-SCS---VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~-~l~---~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..|| .|++| .|    +..++. .++   ...++..+   ++.+|+.+|.|++|.|+++||..++..
T Consensus        15 l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~---~~~l~~~~D~~~dg~I~~~EF~~~~~~   84 (99)
T 1qls_A           15 LIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGV---LDRMMKKLDLDSDGQLDFQEFLNLIGG   84 (99)
T ss_dssp             HHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHH---HHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            889999998 99999 88    444444 221   02345555   899999999999999999999999865

>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A

Probab=97.63  E-value=3.9e-05  Score=69.14  Aligned_cols=56  Identities=18%  Similarity=0.230  Sum_probs=44.4

Q ss_pred             ccccceeEEEEEEeecc------cccCCceEEEEEccc------ceEeeeecCCCCCCCchhhHHHHH
Q 008959           48 NEEDFAGIALLTLISAE------MKFKDKWLACVSLGE------QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        48 ~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~------~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ..+.-.|.|+|+|++|+      ..++.|||+++.++.      +.+||+++++++||+|||.+.+-+
T Consensus        14 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v   81 (153)
T 3b7y_A           14 EDEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRV   81 (153)
T ss_dssp             SCCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEE
T ss_pred             cCCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEe
Confidence            44677899999999995      346789999999984      689999999999999999655433

>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1

Probab=97.62  E-value=2.7e-05  Score=68.90  Aligned_cols=52  Identities=17%  Similarity=0.337  Sum_probs=42.8

Q ss_pred             ceeEEEEEEeecc-c-----ccC-----------CceEEEEEcccce-EeeeecCCCCCCCchhhHHHHH
Q 008959           52 FAGIALLTLISAE-M-----KFK-----------DKWLACVSLGEQT-CRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        52 ~~gi~~i~~~~A~-~-----~~~-----------dd~~~~v~~g~~~-frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ..|.|+|+|++|+ +     .++           .||||++.++.+. .||++.++++||+|||.+...+
T Consensus         4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v   73 (136)
T 1gmi_A            4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDV   73 (136)
T ss_dssp             EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEE
T ss_pred             cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEe
Confidence            5799999999995 2     122           8999999998876 6999999999999999666554

>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A

Probab=97.61  E-value=3.7e-05  Score=67.52  Aligned_cols=50  Identities=24%  Similarity=0.207  Sum_probs=42.2

Q ss_pred             eEEEEEEeecc------cccCCceEEEEEccc--ceEeeeecCCCCCCCchhhHHHHH
Q 008959           54 GIALLTLISAE------MKFKDKWLACVSLGE--QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        54 gi~~i~~~~A~------~~~~dd~~~~v~~g~--~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ..|+|+|++|+      ..+++|||+++.++.  +.+||+++++++||+|||.+.+.+
T Consensus         5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v   62 (132)
T 3pyc_A            5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYV   62 (132)
T ss_dssp             EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEE
T ss_pred             EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEe
Confidence            46899999995      356789999999874  899999999999999999665544

>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A

Probab=97.61  E-value=3e-05  Score=68.96  Aligned_cols=53  Identities=21%  Similarity=0.144  Sum_probs=45.0

Q ss_pred             ccccceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHH
Q 008959           48 NEEDFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        48 ~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~k  100 (547)
                      .-+.-.|.|.|+|++|+      ..++.|||+++.++.     +.+||+++++++||+||+.+.
T Consensus        23 ~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~   86 (142)
T 2chd_A           23 LYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQ   86 (142)
T ss_dssp             EEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEE
T ss_pred             EEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEE
Confidence            33567899999999995      356789999999986     899999999999999999543

>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2

Probab=97.60  E-value=3.9e-05  Score=67.95  Aligned_cols=52  Identities=8%  Similarity=0.056  Sum_probs=44.4

Q ss_pred             ccceeEEEEEEeecc------c-ccCCceEEEEEcc---cceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------M-KFKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~-~~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.|.|.|+|++|+      . +++.|||+++.++   .+.+||+++++++||+|||.+..
T Consensus        18 ~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f   79 (138)
T 1ugk_A           18 NFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTF   79 (138)
T ss_dssp             EGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEE
T ss_pred             ECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEE
Confidence            567899999999995      2 3778999999985   48999999999999999996554

>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2

Probab=97.60  E-value=2.2e-05  Score=69.49  Aligned_cols=53  Identities=15%  Similarity=0.167  Sum_probs=45.1

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +...|.|+|+|++|+      ..++.|||+++.+     +.+.+||+++++++||+|||.+...
T Consensus        17 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~   80 (141)
T 1v27_A           17 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYS   80 (141)
T ss_dssp             ETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEEC
T ss_pred             eCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEc
Confidence            556799999999995      3567899999998     6889999999999999999955443

>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}

Probab=97.59  E-value=3.1e-05  Score=84.40  Aligned_cols=52  Identities=19%  Similarity=0.233  Sum_probs=45.5

Q ss_pred             ccceeEEEEEEeecc-----cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE-----MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~-----~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ..-+|.|+|+|++|+     ..+++|||+++.++.+.+||+++++++||+||+.+.+
T Consensus       390 ~~~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f  446 (540)
T 3nsj_A          390 QRGLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDF  446 (540)
T ss_dssp             STTEEEEEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEE
T ss_pred             cCcccEEEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEE
Confidence            344899999999995     3567899999999999999999999999999996554

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=97.56  E-value=4e-05  Score=63.88  Aligned_cols=58  Identities=16%  Similarity=0.208  Sum_probs=45.5

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.||. ++|.|    +..++..     ++. .++..+   +..+++.+|.|+||.|+++||..++..
T Consensus        11 l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~-~~~~~e---v~~l~~~~D~d~dG~I~f~EF~~~~~~   77 (96)
T 1a4p_A           11 MMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLEN-QKDPLA---VDKIMKDLDQCRDGKVGFQSFFSLIAG   77 (96)
T ss_dssp             HHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHH-SCCTTH---HHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHcC-CCCeECHHHHHHHHHHHccccccc-ccCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            8999999993 56687    5555543     222 345566   899999999999999999999999865

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=97.56  E-value=0.00016  Score=82.89  Aligned_cols=108  Identities=11%  Similarity=0.141  Sum_probs=84.5

Q ss_pred             CCCcccceecccC-------hHHHHHHHHhhCCC-------CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcC
Q 008959          106 NGPHVARISVFED-------SDADSEVFDLLDPS-------SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDY  167 (547)
Q Consensus       106 ~~~~~~~isl~e~-------~~el~~~F~~~D~d-------~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~  167 (547)
                      ..++.+.+++.+.       ..++..+|+.+|.+       ++|.+    |..++..+..    ..+   ++.+|+.+|.
T Consensus       162 D~n~dGkIs~kel~~~l~~~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~----R~E---I~eiF~~yds  234 (885)
T 3ohm_B          162 QVNQDGRIPVKNILKMFSADKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL----RPD---IDKILLEIGA  234 (885)
T ss_dssp             SCCTTSCEEHHHHHHTTGGGHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC----CHH---HHHHHHHTTC
T ss_pred             ccCCCCccCHHHHHHHHhcCHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC----HHH---HHHHHHHHhc
Confidence            4556677765432       22378899999987       67777    4445554432    334   9999999999


Q ss_pred             CCCCcccHHHHHHHHHhcC-C---------cchHHHHHHHHHHhcCC----CCCCcCHHHHHHHHHh
Q 008959          168 NQDGQLSFKEFSDLISAFG-N---------QVAANKKEELFKAADKN----GDGVVSVDELAALLAL  220 (547)
Q Consensus       168 d~dG~Is~~Ef~~~l~~lg-~---------~~~~eel~~~F~~~D~d----~dG~Is~~Ef~~~l~~  220 (547)
                      +++|.|+.+||..+|...+ +         ..+.+++.++|+.+|.+    ++|.|++++|.++|..
T Consensus       235 d~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S  301 (885)
T 3ohm_B          235 KGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG  301 (885)
T ss_dssp             CSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred             CCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence            9999999999999999864 3         26789999999999999    7999999999999975

>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2

Probab=97.55  E-value=3.8e-05  Score=69.30  Aligned_cols=53  Identities=19%  Similarity=0.159  Sum_probs=44.7

Q ss_pred             cccceeEEEEEEeecc------cccCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHH
Q 008959           49 EEDFAGIALLTLISAE------MKFKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        49 ~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -+.-.|.|+|+|++|+      ..++.|||+++.+   +.+.+||+++++++||+|||.+..
T Consensus        37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f   98 (152)
T 1rsy_A           37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTF   98 (152)
T ss_dssp             EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEE
T ss_pred             EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEE
Confidence            3556799999999995      3567899999999   567999999999999999995544

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=97.54  E-value=2.4e-05  Score=65.82  Aligned_cols=59  Identities=19%  Similarity=0.260  Sum_probs=45.2

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhh-----cCC-CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLS-----CSV-EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~-----l~~-~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.||.+ +|.|    +..++..     ++. ..+++.+   +..+++.+|.|+||.|+++||..++..
T Consensus        12 l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~e---v~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (100)
T 1psr_A           12 MIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNY---LADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCG---GGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            89999999976 7888    5555544     111 0233444   788999999999999999999999864

>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}

Probab=97.53  E-value=2.9e-05  Score=70.74  Aligned_cols=54  Identities=15%  Similarity=0.038  Sum_probs=44.8

Q ss_pred             ccccceeEEEEEEeecc------cccCCceEEEEEccc------ceEeeeecCCCCCCCchhhHHH
Q 008959           48 NEEDFAGIALLTLISAE------MKFKDKWLACVSLGE------QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        48 ~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~------~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .-+.-.|.|+|+|++|+      ..++.|||+.+.+..      +.+||+++++++||+|||.+..
T Consensus        37 ~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f  102 (155)
T 2z0u_A           37 KYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWV  102 (155)
T ss_dssp             EEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEE
T ss_pred             EEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEE
Confidence            33566799999999995      367889999999975      3899999999999999995443

>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2

Probab=97.53  E-value=4.4e-05  Score=68.55  Aligned_cols=55  Identities=15%  Similarity=0.088  Sum_probs=45.1

Q ss_pred             cccceeEEEEEEeecc------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHHH
Q 008959           49 EEDFAGIALLTLISAE------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        49 ~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ...-.|.|+|+|++|+      ..++.|||+++.++     .+.+||+++++++||+|||.+.+-+
T Consensus        26 l~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v   91 (149)
T 1a25_A           26 AHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQL   91 (149)
T ss_dssp             EEESSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEEC
T ss_pred             EEecCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEe
Confidence            3344689999999995      35678999999997     6899999999999999999655443

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=97.49  E-value=0.00011  Score=63.93  Aligned_cols=56  Identities=23%  Similarity=0.316  Sum_probs=47.2

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.+|+ ++|.|    +..++...+   ...++   +.++|+..|.|+||.|+++||..+|.-
T Consensus        35 y~~iF~~lD~-~dG~Isg~elr~~~~~sg---Lp~~~---L~~Iw~laD~d~dG~Ld~~EF~~aM~L   94 (121)
T 3fia_A           35 HDQQFHSLKP-ISGFITGDQARNFFFQSG---LPQPV---LAQIWALADMNNDGRMDQVEFSIAMKL   94 (121)
T ss_dssp             HHHHHHHTCC-BTTBEEHHHHHHHHGGGC---CCHHH---HHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHhCC-CCCeECHHHHHHHHHHcC---CCHHH---HHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            8999999999 89999    556666553   44555   999999999999999999999998854

>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*

Probab=97.48  E-value=5.7e-05  Score=67.21  Aligned_cols=52  Identities=19%  Similarity=0.179  Sum_probs=44.6

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.|.|.|+|++|+      ..++.|||+++.+   +.+.+||+++++++||+||+.+..
T Consensus        30 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f   90 (143)
T 3f04_A           30 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTF   90 (143)
T ss_dssp             ETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEE
T ss_pred             eCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEE
Confidence            556799999999995      3567899999999   777999999999999999995543

>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1

Probab=97.47  E-value=4.2e-05  Score=70.66  Aligned_cols=52  Identities=10%  Similarity=0.155  Sum_probs=42.8

Q ss_pred             ccceeEEEEEEeeccc---ccCCceEEEEEcccceEeeeecC-CCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAEM---KFKDKWLACVSLGEQTCRTAISD-NTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~~---~~~dd~~~~v~~g~~~frT~vi~-~tLnP~Wne~~kll~  103 (547)
                      ...+|+|+|+|++|+.   .++.||||++.  .+.+||++++ +++||+|||.+.+.+
T Consensus        10 ~g~~~~L~V~V~~A~~l~~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v   65 (167)
T 2cjs_A           10 GGILSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEI   65 (167)
T ss_dssp             CSCCCEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEC
T ss_pred             CCceEEEEEEEEEEECCCCCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEe
Confidence            4458999999999973   56789999999  5678998886 699999999666555

>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A

Probab=97.46  E-value=6.2e-05  Score=68.94  Aligned_cols=54  Identities=17%  Similarity=0.080  Sum_probs=45.4

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.-.|.|.|+|++|+      ..++.|||+++.++.     +.+||+++++++||+||+.+..-+
T Consensus        33 ~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v   97 (166)
T 2cm5_A           33 STQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDI   97 (166)
T ss_dssp             ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEEC
T ss_pred             ECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEc
Confidence            556899999999995      356789999999986     799999999999999999554433

>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.42  E-value=0.00011  Score=65.29  Aligned_cols=51  Identities=10%  Similarity=0.071  Sum_probs=42.1

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.|.|.|+|++|+      ..+ .|||+++.+.     .+.+||+++++++||+|||.+.+
T Consensus        20 ~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f   81 (142)
T 2dmg_A           20 SSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDF   81 (142)
T ss_dssp             ETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEE
T ss_pred             eCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEE
Confidence            556799999999995      234 8999999983     37999999999999999995443

>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1

Probab=97.39  E-value=6.9e-05  Score=66.21  Aligned_cols=49  Identities=10%  Similarity=0.181  Sum_probs=40.5

Q ss_pred             eeEEEEEEeeccc---ccCCceEEEEEcccceEeeeecC-CCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAEM---KFKDKWLACVSLGEQTCRTAISD-NTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~~---~~~dd~~~~v~~g~~~frT~vi~-~tLnP~Wne~~kll~  103 (547)
                      +|.|.|+|++|+.   .++.||||++.  .+.+||++++ +++||+|||.+...+
T Consensus         4 ~~~L~V~V~~A~~l~~~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v   56 (131)
T 2cjt_A            4 MSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEI   56 (131)
T ss_dssp             CEEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEE
T ss_pred             ceEEEEEEEEeECCCCCCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEE
Confidence            6899999999973   56789999999  5677888776 699999999666554

>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*

Probab=97.37  E-value=8e-05  Score=67.63  Aligned_cols=53  Identities=19%  Similarity=0.165  Sum_probs=44.2

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +...|.|.|+|++|+      ..++.|||+++.++.     +.+||+++++++||+|||.+.+.
T Consensus        21 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~   84 (159)
T 1tjx_A           21 VPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFE   84 (159)
T ss_dssp             ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEE
T ss_pred             cCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEE
Confidence            556899999999995      356789999999863     58999999999999999955443

>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}

Probab=97.35  E-value=9.6e-05  Score=66.23  Aligned_cols=53  Identities=13%  Similarity=0.139  Sum_probs=44.6

Q ss_pred             ccceeEEEEEEeecc-------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE-------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~-------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +.-.|.|.|+|++|+       ..++.|||+++.++     .+.+||+++++++||+||+.+...
T Consensus        19 ~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~   83 (148)
T 3fdw_A           19 EQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYE   83 (148)
T ss_dssp             ETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEE
T ss_pred             eCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEE
Confidence            556799999999994       35678999999987     569999999999999999955443

>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0

Probab=97.35  E-value=9.8e-05  Score=66.69  Aligned_cols=58  Identities=14%  Similarity=0.092  Sum_probs=47.0

Q ss_pred             cccccccceeEEEEEEeecc-c----ccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHHH
Q 008959           45 RVLNEEDFAGIALLTLISAE-M----KFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        45 ~~~~~~~~~gi~~i~~~~A~-~----~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      -+++-+.-.|.|.|+|++|+ +    .+..|||+++.+     +.+.+||+++++++||+|||.+...
T Consensus        18 lsL~y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~   85 (153)
T 3fbk_A           18 LRLSIDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFP   85 (153)
T ss_dssp             EEEEEEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEE
T ss_pred             EEEEEECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEe
Confidence            34455777899999999995 2    466799999998     5678999999999999999955443

>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}

Probab=97.34  E-value=6.8e-05  Score=69.22  Aligned_cols=52  Identities=21%  Similarity=0.107  Sum_probs=42.8

Q ss_pred             ceeEEEEEEeecc-------cccCCceEEEEEcccc-----eEeeeecCCCCCCCchhhHHHHH
Q 008959           52 FAGIALLTLISAE-------MKFKDKWLACVSLGEQ-----TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        52 ~~gi~~i~~~~A~-------~~~~dd~~~~v~~g~~-----~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      -.|.|.|+|++|+       ..++.|||+++.++..     .+||+++++++||+|||.+.+.+
T Consensus        28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v   91 (171)
T 2q3x_A           28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDE   91 (171)
T ss_dssp             ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSS
T ss_pred             CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEe
Confidence            5799999999994       1477899999998753     89999999999999999655544

>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B

Probab=97.32  E-value=9.3e-05  Score=79.90  Aligned_cols=52  Identities=23%  Similarity=0.304  Sum_probs=45.0

Q ss_pred             ceeEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           52 FAGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        52 ~~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      -+|.|+|+|++|+      ..+++|||+++.++.+.+||+++++++||+||+.+.+.+
T Consensus       385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~  442 (510)
T 3jzy_A          385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFI  442 (510)
T ss_dssp             -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEE
T ss_pred             CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEe
Confidence            4689999999995      367789999999999999999999999999999655443

>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A

Probab=97.32  E-value=9.6e-05  Score=66.58  Aligned_cols=54  Identities=11%  Similarity=0.072  Sum_probs=42.7

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEccc--c---eEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGE--Q---TCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~--~---~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +...|.|.|+|++|+      ..++.|||+++.++.  +   .+||+++++++||+|||.+...+
T Consensus        26 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v   90 (153)
T 1w15_A           26 QSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDI   90 (153)
T ss_dssp             ETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEEC
T ss_pred             cCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEEC
Confidence            567899999999995      356789999999843  2   78999999999999999665544

>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}

Probab=97.31  E-value=0.00011  Score=64.64  Aligned_cols=53  Identities=17%  Similarity=0.100  Sum_probs=44.1

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +.-.|.|.|+|++|+      ..++.|||+++.++.     +.+||+++++++||+|||.+...
T Consensus        12 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~   75 (138)
T 3n5a_A           12 NPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFD   75 (138)
T ss_dssp             ETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEE
T ss_pred             cCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEE
Confidence            455689999999995      356789999999875     58999999999999999955443

>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2

Probab=97.30  E-value=2.5e-05  Score=69.38  Aligned_cols=49  Identities=18%  Similarity=0.158  Sum_probs=41.9

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEccc--------------ceEeeeecCCCCCCCchhhHHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSLGE--------------QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~g~--------------~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .|.|+|+|++|+      ..+++|||+++.++.              +.+||+++++++||+||+.+..
T Consensus        17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f   85 (142)
T 1rh8_A           17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIY   85 (142)
T ss_dssp             TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEE
T ss_pred             CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEE
Confidence            799999999995      356789999999986              3689999999999999995543

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=97.21  E-value=2.2e-05  Score=68.57  Aligned_cols=86  Identities=10%  Similarity=0.127  Sum_probs=35.3

Q ss_pred             hhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHH-----HHHhcC-CcchHHHHHHHHHHhcCCCCCCcCHHHHHH
Q 008959          143 LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD-----LISAFG-NQVAANKKEELFKAADKNGDGVVSVDELAA  216 (547)
Q Consensus       143 ~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~-----~l~~lg-~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~  216 (547)
                      +.++. +++..+   ++.++..+    +|.|+++||..     ++.... .....++++++|+.+|    |+|+.+||..
T Consensus         3 r~lG~-~~t~~e---i~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~   70 (123)
T 2kld_A            3 TAIGI-NDTYSE---VKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQ   70 (123)
T ss_dssp             --------------------------------------------------------CCSCSSTTTT----TCEEHHHHHH
T ss_pred             hhcCC-CCCHHH---HHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHH
Confidence            44554 566666   77777755    79999999999     665432 2223356888999998    9999999999


Q ss_pred             HHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          217 LLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       217 ~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +++.+|.  ++    ..+.+++...|.+++
T Consensus        71 ~l~~lG~--t~----~ei~~~~~~~D~d~d   94 (123)
T 2kld_A           71 DLKGKGH--TD----AEIEAIFTKYDQDGD   94 (123)
T ss_dssp             HTTTCCS--SH----HHHHHHHHHHSSSSC
T ss_pred             HHHHhCC--CH----HHHHHHHHHHcCCCC
Confidence            9988876  22    457788887776554

>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A

Probab=97.20  E-value=0.00019  Score=72.06  Aligned_cols=56  Identities=13%  Similarity=0.058  Sum_probs=47.0

Q ss_pred             ccccceeEEEEEEeecc------cccCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHHHH
Q 008959           48 NEEDFAGIALLTLISAE------MKFKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        48 ~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      .-+.-.|.|+|+|++|+      ..++.|||+++.+   +.+.+||+++++++||+|||.+...+
T Consensus        14 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v   78 (296)
T 1dqv_A           14 RYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSV   78 (296)
T ss_dssp             ECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEEC
T ss_pred             EEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEe
Confidence            34666899999999995      3567899999999   78999999999999999999655433

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=97.17  E-value=0.00012  Score=71.12  Aligned_cols=62  Identities=21%  Similarity=0.291  Sum_probs=53.6

Q ss_pred             HHHHHHHhhcC-CCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          157 FARRILSIVDY-NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       157 ~l~~~f~~~D~-d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+..+|..+|. |+||.|+..||..++..+.  ..+.-++.+|+..|.|+||.||++||...+..
T Consensus       156 ~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~--~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~~  218 (229)
T 1nub_A          156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  218 (229)
T ss_dssp             HHHHHHHHHTTTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTTC
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh--hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhCC
Confidence            48889999999 8999999999999886543  24556789999999999999999999998854

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=97.07  E-value=0.00051  Score=78.14  Aligned_cols=92  Identities=16%  Similarity=0.214  Sum_probs=73.6

Q ss_pred             HHHHHHhh-------CCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC-Cc-
Q 008959          122 DSEVFDLL-------DPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG-NQ-  188 (547)
Q Consensus       122 l~~~F~~~-------D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-~~-  188 (547)
                      +.++++..       |.+++|.+    |..++..+..    ..+   ++.+|+.+|.|++|.|+. ||..+|...+ +. 
T Consensus       191 l~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~----R~E---I~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~  262 (816)
T 3qr0_A          191 ISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE----RSE---IEGIFKELSKNKGNITTV-MFRDFLNDMQRHPS  262 (816)
T ss_dssp             HHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC----CTH---HHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTT
T ss_pred             HHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC----HHH---HHHHHHHHccCCCCcccH-HHHHHHHHhCCccc
Confidence            66667766       67788888    4455555432    334   899999999999999999 9999999875 33 


Q ss_pred             --------chHHHHHHHHHHhcC--C----CCCCcCHHHHHHHHHhh
Q 008959          189 --------VAANKKEELFKAADK--N----GDGVVSVDELAALLALQ  221 (547)
Q Consensus       189 --------~~~eel~~~F~~~D~--d----~dG~Is~~Ef~~~l~~l  221 (547)
                              .+.++++++++.++.  |    ++|.|++++|..+|...
T Consensus       263 ~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~  309 (816)
T 3qr0_A          263 LHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCE  309 (816)
T ss_dssp             SCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSG
T ss_pred             cccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcc
Confidence                    578899999999987  5    68999999999999764

>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2

Probab=96.97  E-value=0.00034  Score=69.42  Aligned_cols=54  Identities=19%  Similarity=0.150  Sum_probs=45.1

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEcc---cceEeeeecCCCCCCCchhhHHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.-.|.|+|+|++|+      ..++.|||+++.++   .+.+||+++++++||+|||.+...+
T Consensus        15 ~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v   77 (284)
T 2r83_A           15 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKV   77 (284)
T ss_dssp             ETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECC
T ss_pred             ECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEe
Confidence            556799999999995      35789999999996   4689999999999999999655543

>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}

Probab=96.61  E-value=0.00062  Score=60.75  Aligned_cols=49  Identities=10%  Similarity=0.159  Sum_probs=43.2

Q ss_pred             EEEEEEeecc-cccCCceEEEEEcccceEeeeecC-CCCCCCchhhHHHHH
Q 008959           55 IALLTLISAE-MKFKDKWLACVSLGEQTCRTAISD-NTDKPIWNSEKKLLL  103 (547)
Q Consensus        55 i~~i~~~~A~-~~~~dd~~~~v~~g~~~frT~vi~-~tLnP~Wne~~kll~  103 (547)
                      .|+|+|..|. +.++.||++.+.+.+..+||++++ .++||+|||.++--+
T Consensus        22 sL~V~l~~a~~Lpg~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl   72 (144)
T 3l9b_A           22 ALIVHLKTVSELRGRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPV   72 (144)
T ss_dssp             EEEEEEEEEESCCSCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEE
T ss_pred             EEEEEEEEecCCCCCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecC
Confidence            4899999995 788999999999999999999998 699999999665544

>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}

Probab=96.56  E-value=0.00029  Score=75.87  Aligned_cols=51  Identities=18%  Similarity=0.304  Sum_probs=7.8

Q ss_pred             ceeEEEEEEeecc-cccCCceEEEEEcccc-eEeeeecCCC---CCCCchhhHHHH
Q 008959           52 FAGIALLTLISAE-MKFKDKWLACVSLGEQ-TCRTAISDNT---DKPIWNSEKKLL  102 (547)
Q Consensus        52 ~~gi~~i~~~~A~-~~~~dd~~~~v~~g~~-~frT~vi~~t---LnP~Wne~~kll  102 (547)
                      +.|.|+|+|++|+ +..+|||||.+.++.+ .+||++++++   +||+|||.+..-
T Consensus         9 ~~~~L~V~VieAk~L~~~ddpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~   64 (483)
T 3bxj_A            9 VDNVLKLWIIEARELPPKKRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFN   64 (483)
T ss_dssp             EEECC---------------------------------------------CCEECC
T ss_pred             eccEEEEEEEEcCCcCCCCCCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEe
Confidence            5689999999996 6777799999998876 7799999999   999999966553

>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3

Probab=96.56  E-value=0.0023  Score=57.70  Aligned_cols=56  Identities=16%  Similarity=0.283  Sum_probs=44.3

Q ss_pred             HHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          122 DSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       122 l~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      +.-.|..+|.| +||.|    +..+...+.   +.+..   +...|+.+|.|+||.||++||...+.
T Consensus        79 l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~---~~e~c---v~~ff~~cD~d~Dg~ISl~Ew~~Clg  139 (151)
T 1sra_A           79 VHWQFGQLDQHPIDGYLSHTELAPLRAPLI---PMEHC---TTRFFETCDLDNDKYIALDEWAGCFG  139 (151)
T ss_dssp             HHHHHHHHCCTTCSSEECTTTTGGGGSTTS---TTGGG---HHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred             HHhHHHHHCCCCCCCcCcHHHHHHHHHHhc---ChHHH---HHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence            77899999997 99999    444443332   33444   78999999999999999999998874

>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A

Probab=96.50  E-value=0.0012  Score=74.44  Aligned_cols=54  Identities=15%  Similarity=0.251  Sum_probs=45.9

Q ss_pred             cceeEEEEEEeecc-c--------ccCCceEEEEEcc---cceEeeeecCCCCCCCchhhHHHHHh
Q 008959           51 DFAGIALLTLISAE-M--------KFKDKWLACVSLG---EQTCRTAISDNTDKPIWNSEKKLLLE  104 (547)
Q Consensus        51 ~~~gi~~i~~~~A~-~--------~~~dd~~~~v~~g---~~~frT~vi~~tLnP~Wne~~kll~e  104 (547)
                      ...|.|+|+|++|+ +        .++.||||++.++   .+.+||+++++++||+|||.+...+.
T Consensus        15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~   80 (749)
T 1cjy_A           15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILD   80 (749)
T ss_dssp             CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEEC
T ss_pred             CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEec
Confidence            45799999999995 2        3578999999999   57999999999999999997766553

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=96.42  E-value=0.011  Score=51.04  Aligned_cols=57  Identities=16%  Similarity=0.403  Sum_probs=46.2

Q ss_pred             CCCCCcccHHHHHHHHHhc-CCc-chHHHHHHHHHHhcCCC--------CCCcCHHHHHHHHHhhhc
Q 008959          167 YNQDGQLSFKEFSDLISAF-GNQ-VAANKKEELFKAADKNG--------DGVVSVDELAALLALQQE  223 (547)
Q Consensus       167 ~d~dG~Is~~Ef~~~l~~l-g~~-~~~eel~~~F~~~D~d~--------dG~Is~~Ef~~~l~~l~~  223 (547)
                      ...+|.|+.++|..++... ... .+..-+..+|..||.|+        +|.|++.||...|.-+..
T Consensus        42 ~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~~~~~~~~~~g~I~fkefi~~LSll~r  108 (118)
T 1tuz_A           42 YVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEG  108 (118)
T ss_dssp             GEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHHS
T ss_pred             cCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhcccccccccCCCCeEeHHHHHHHHHHhcC
Confidence            4568999999999999984 333 55566777999999985        899999999999877643

>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A

Probab=96.34  E-value=0.0048  Score=56.37  Aligned_cols=81  Identities=17%  Similarity=0.155  Sum_probs=52.1

Q ss_pred             CCCCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEE
Q 008959          409 CMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFV  488 (547)
Q Consensus       409 ~~~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~  488 (547)
                      .|.++..++||+||+++...++.+.         +--..++|             ..+++.|.+ |..++|++|+|..+.
T Consensus         8 ~p~~~~~i~aP~~G~vv~l~~v~D~---------vfs~~~~G-------------~Giai~p~~-~~v~AP~~G~V~~v~   64 (162)
T 1ax3_A            8 NEIGEEVFVSPITGEIHPITDVPDQ---------VFSGKMMG-------------DGFAILPSE-GIVVSPVRGKILNVF   64 (162)
T ss_dssp             CTTCCSSCCCCCSEEEEEGGGSSSH---------HHHTCTTS-------------EEEEEEECS-SEEEESCCEEEEECC
T ss_pred             CCCCCCEEEecCceEEEEeEECCCc---------ccccccee-------------ceEEEEeCC-CcEECCCCeEEEEEc
Confidence            3445667899999999998777532         11122333             234567774 678999999995443


Q ss_pred             EecCceeccChhhhhccCCCCccceeEEEEEEeecCcceEEEEeccccc
Q 008959          489 DIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVCHYSRSHSH  537 (547)
Q Consensus       489 ~i~G~~~~v~p~a~~~~~~~~~~~N~R~v~~~~t~~~G~v~~v~VGa~~  537 (547)
                                              |+|..+.|++++ |.-.+|-||.--
T Consensus        65 ------------------------~t~hAigi~t~~-G~evLiHIGidT   88 (162)
T 1ax3_A           65 ------------------------PTKHAIGLQSDG-GREILIHFGIDT   88 (162)
T ss_dssp             ------------------------SSSSEEEEESSS-SCEEEEECSSST
T ss_pred             ------------------------cCCeEEEEEcCC-CCEEEEEECccc
Confidence                                    566777788754 544445777433

>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A

Probab=96.32  E-value=0.0018  Score=64.80  Aligned_cols=51  Identities=25%  Similarity=0.221  Sum_probs=42.3

Q ss_pred             cceeEEEEEEeecc------cccCCceEEEEEcc-----cceEeeeecCCCCCCCchhhHHH
Q 008959           51 DFAGIALLTLISAE------MKFKDKWLACVSLG-----EQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        51 ~~~gi~~i~~~~A~------~~~~dd~~~~v~~g-----~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .-.|.|.|+|++|+      ..++.|||+.+.++     .+.+||+++++++||+||+.+..
T Consensus       149 ~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f  210 (296)
T 1dqv_A          149 PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVF  210 (296)
T ss_dssp             TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCC
T ss_pred             cccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEE
Confidence            34699999999995      35667999999996     36899999999999999995443

>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1

Probab=96.23  E-value=0.0047  Score=55.94  Aligned_cols=52  Identities=27%  Similarity=0.473  Sum_probs=36.6

Q ss_pred             ceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEE
Q 008959          414 EVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFV  488 (547)
Q Consensus       414 ~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~  488 (547)
                      ..++||+||++....++.+.         +--..++|             ..+.+.|.+ |..+||++|+|..+.
T Consensus         8 ~~i~aP~~G~vv~l~~v~D~---------vf~~~~~G-------------~Giai~p~~-~~v~AP~~G~V~~v~   59 (154)
T 2gpr_A            8 LKVLAPCDGTIITLDEVEDE---------VFKERMLG-------------DGFAINPKS-NDFHAPVSGKLVTAF   59 (154)
T ss_dssp             EEEECSSSEEEECGGGSSCH---------HHHTTSSC-------------EEEEEEESS-SEEECSSCEEEEECC
T ss_pred             CEEEecCCeEEEEeeECCCc---------ccccccee-------------CeEEEEeCC-CcEECCCCeEEEEEc
Confidence            46899999999998877532         11112333             334577888 999999999996543

>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2

Probab=96.13  E-value=0.0027  Score=62.89  Aligned_cols=51  Identities=20%  Similarity=0.202  Sum_probs=41.5

Q ss_pred             cceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHH
Q 008959           51 DFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        51 ~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .-.|.|.|+|++|+      ..++.|||+.+.++.     +.+||+++++++||+||+.+..
T Consensus       147 p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f  208 (284)
T 2r83_A          147 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSF  208 (284)
T ss_dssp             TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEE
T ss_pred             CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEE
Confidence            34688999999995      346789999999843     5789999999999999995443

>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A

Probab=95.57  E-value=0.015  Score=52.90  Aligned_cols=52  Identities=15%  Similarity=0.316  Sum_probs=37.0

Q ss_pred             ceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEEE
Q 008959          414 EVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFV  488 (547)
Q Consensus       414 ~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~~  488 (547)
                      ..++||+||+++...++.+.         +--..++|             ..+++.|.+ |..++|++|+|..+.
T Consensus        13 ~~i~aP~~G~vv~l~~v~D~---------vfs~~~~G-------------~Giai~p~~-~~v~AP~~G~V~~v~   64 (161)
T 1f3z_A           13 IEIIAPLSGEIVNIEDVPDV---------VFAEKIVG-------------DGIAIKPTG-NKMVAPVDGTIGKIF   64 (161)
T ss_dssp             EEEECSSCEEEEEGGGSSSH---------HHHTTSSC-------------EEEEEEECS-SEEECSSSEEEEEEC
T ss_pred             cEEEecCCeEEEEeEECCCc---------ccccccee-------------CeEEEEeCC-CcEECCCCeEEEEEc
Confidence            46899999999998877532         11112333             345688888 899999999996654

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=95.31  E-value=0.0098  Score=57.49  Aligned_cols=57  Identities=16%  Similarity=0.276  Sum_probs=44.6

Q ss_pred             HHHHHHhhCC-CCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDP-SSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~-d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.-.|..+|. |+||.|    +..+...+.   +.+.-   +..+|+..|.|+||.||++||...+..
T Consensus       157 v~w~F~~lD~~n~dg~l~~~El~~i~~~l~---~~~~c---~~~~~~~cD~n~D~~is~~Ew~~cf~~  218 (229)
T 1nub_A          157 VHWQFGQLDQHPIDGYLSHTELAPLRAPLI---PMEHC---TTRFFETCDLDNDKYIALDEWAGCFGI  218 (229)
T ss_dssp             HHHHHHHHTTTTCSSEECTTTTGGGGSTTS---TTGGG---HHHHHHHHCTTCSSCEEHHHHHHHTTC
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHHHh---hHHHH---HHHHHHHcCCCCCCcCCHHHHHHHhCC
Confidence            7889999999 899998    444443322   22333   688999999999999999999998754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=94.02  E-value=0.029  Score=62.74  Aligned_cols=49  Identities=14%  Similarity=0.188  Sum_probs=42.8

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      .|+|.|+|++|+      ..+++|||+.+.+     +.+..||+++++++||+||+.+..
T Consensus       171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f  230 (674)
T 3pfq_A          171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRF  230 (674)
T ss_dssp             SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEE
T ss_pred             cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeee
Confidence            588999999994      3678899999998     778899999999999999996544

>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}

Probab=92.26  E-value=0.22  Score=54.20  Aligned_cols=64  Identities=22%  Similarity=0.246  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          154 EKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       154 e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +......+|...|.. +|+|+=++-..++...+  ++.+.+.+++...|.|+||.++.+||.-.|.-
T Consensus       456 ~~~~y~~~F~~~~~~-~g~i~g~~a~~~~~~s~--Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~L  519 (550)
T 2qpt_A          456 DKSKYDEIFYNLAPA-DGKLSGSKAKTWMVGTK--LPNSVLGRIWKLSDVDRDGMLDDEEFALASHL  519 (550)
T ss_dssp             THHHHHHHHHHTCCS-SSEECHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCC-CCeecHHHHHHHHHHcC--CCHHHHHHHhcccCCCCCCcCCHHHHHHHHHH
Confidence            455688999999954 69999999999997666  89999999999999999999999999988844

>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A

Probab=88.43  E-value=0.55  Score=38.12  Aligned_cols=57  Identities=23%  Similarity=0.243  Sum_probs=39.9

Q ss_pred             hhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          164 IVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       164 ~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .=|.|+||.|+..++..+.+-+ +...... ..+-....|.|+||.|+..++..+-+-+
T Consensus        22 ~GDvNgDG~Vn~~D~~llk~yllg~~~~~~-~~~~~~aADvNgDG~In~~D~~~lkkyL   79 (88)
T 4fl4_A           22 MGDVNDDGKVNSTDLTLLKRYVLKAVSTLP-SSKAEKNADVNRDGRVNSSDVTILSRYL   79 (88)
T ss_dssp             TTCTTCSSCCSHHHHHHHHHHHHTSSCCCS-SHHHHHHHCTTCSSCCSHHHHHHHHHHH
T ss_pred             cccCCCCCcCCHHHHHHHHHHHcCCCCCCc-hhhhhhhccccCCCCcCHHHHHHHHHHH
Confidence            4589999999999998877663 4321100 0122457899999999999997766544

>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11

Probab=86.18  E-value=5.4  Score=34.38  Aligned_cols=72  Identities=11%  Similarity=0.166  Sum_probs=55.7

Q ss_pred             CCChHHHHHHHHHHHhhcCC---CCCcccHHHHHHHHHh---c-CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          149 DPIETEKSFARRILSIVDYN---QDGQLSFKEFSDLISA---F-GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d---~dG~Is~~Ef~~~l~~---l-g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +....+   ++.+|..|-.-   +...|+-..|..++++   + |..++..++.-+|..+ ..+...|+|++|.+.|..+
T Consensus        18 ~~~~~~---L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~l   93 (125)
T 1pul_A           18 NWDDAD---VKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFV   93 (125)
T ss_dssp             CCCHHH---HHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHH
T ss_pred             CccHHH---HHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHH
Confidence            344455   66666665443   3367999999999988   3 3678999999999999 7778899999999999886


Q ss_pred             hcc
Q 008959          222 QEK  224 (547)
Q Consensus       222 ~~~  224 (547)
                      .+.
T Consensus        94 A~~   96 (125)
T 1pul_A           94 AED   96 (125)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}

Probab=86.00  E-value=0.65  Score=37.19  Aligned_cols=54  Identities=20%  Similarity=0.209  Sum_probs=40.0

Q ss_pred             hcCCCCCcccHHHHHHHHHhc-CCc--c-hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          165 VDYNQDGQLSFKEFSDLISAF-GNQ--V-AANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       165 ~D~d~dG~Is~~Ef~~~l~~l-g~~--~-~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      =|.|+||.|+..++..+.+.+ |..  . .+..    ....|.|+||.|+..++..+-+-+-
T Consensus         8 GDvN~DG~Vn~~D~~llk~yllg~~~~~~~~~~----~~~ADvngDG~In~~D~~~lk~yll   65 (82)
T 4dh2_B            8 GDVNADGVVNISDYVLMKRYILRIIADFPADDD----MWVGDVNGDNVINDIDCNYLKRYLL   65 (82)
T ss_dssp             TCTTCSSSCSHHHHHHHHHHHTTSSSSCSSSCH----HHHHCSSSSSCCSHHHHHHHHHHHT
T ss_pred             eccCCCCcCCHHHHHHHHHHHcCCCccCccccc----hhheeccCCCcCCHHHHHHHHHHHh
Confidence            388999999999999888763 432  1 2222    4578999999999999977665543

>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=85.48  E-value=0.42  Score=41.05  Aligned_cols=51  Identities=8%  Similarity=0.113  Sum_probs=34.3

Q ss_pred             CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCC--------CCcccHHHHHHHHHhc
Q 008959          133 SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQ--------DGQLSFKEFSDLISAF  185 (547)
Q Consensus       133 ~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~--------dG~Is~~Ef~~~l~~l  185 (547)
                      .+|.|    |..++...-....  ....+...+|..||.|+        +|.|++.||..+|.-+
T Consensus        44 p~G~i~~e~F~~i~~~ffp~~~--~p~~~~~~lF~~Fd~~~~~~~~~~~~g~I~fkefi~~LSll  106 (118)
T 1tuz_A           44 QGDAIGYEGFQQFLKIYLEVDN--VPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLL  106 (118)
T ss_dssp             ETTEECHHHHHHHHHHHTTCSS--CCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCcCCC--CHHHHHHHHHHHHhcccccccccCCCCeEeHHHHHHHHHHh
Confidence            35666    5555544322110  11234778999999985        8999999999998764

>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}

Probab=85.33  E-value=2.5  Score=37.69  Aligned_cols=60  Identities=17%  Similarity=0.255  Sum_probs=43.7

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.++.+++.+|.|.||.|+..|-..+++. ++..... +-..   .++. +|..||.+||-+....
T Consensus        15 eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~-~k~~---~~h~-~D~~Isv~eLw~~W~~   75 (150)
T 2l5y_A           15 EALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDAT-NKHS---HLHR-EDKHITIEDLWKRWKT   75 (150)
T ss_dssp             HHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSH-HHHH---HHTT-TCCCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCch-hHHh---hhcC-CCCeeeHHHHHHHHcc
Confidence            45888999999999999999999999987 4322222 2222   3443 4689999999886644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	547
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	2e-08
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	3e-07
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	0.003
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-06
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	6e-04
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	3e-06
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	3e-04
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	4e-06
d2zkmx1	170	a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human	6e-06
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	6e-06
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	4e-04
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	9e-06
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	1e-05
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	2e-05
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	0.001
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	2e-05
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	3e-05
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	0.002
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	4e-05
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	4e-05
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	5e-05
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	5e-05
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	6e-05
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	6e-05
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.001
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	7e-05
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	8e-05
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	9e-05
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	1e-04
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	1e-04
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	2e-04
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	1e-04
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	1e-04
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	2e-04
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	7e-04
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	0.003
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	7e-04
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	8e-04
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	0.001
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	0.001
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	0.001
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	0.001
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	0.002
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	0.003
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	0.003

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.2 bits (117), Expect = 2e-08
 Identities = 19/63 (30%), Positives = 33/63 (52%)

Query: 156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELA 215
           S A+R+    D N+DG+LS  EF ++  AF          + F+  D +G+G ++ DE  
Sbjct: 1   SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60

Query: 216 ALL 218
           + +
Sbjct: 61  SCI 63

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 46.0 bits (109), Expect = 3e-07
 Identities = 11/61 (18%), Positives = 26/61 (42%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
            +   + D +  G ++ K+   +    G  +   + +E+   AD+N D  +  DE   ++
Sbjct: 12  LKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 71

Query: 219 A 219
            
Sbjct: 72  K 72

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 34.5 bits (79), Expect = 0.003
 Identities = 12/60 (20%), Positives = 24/60 (40%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS 183
           + F L D  +S  I  K     + E      +   + +++  D N D ++   EF  ++ 
Sbjct: 13  KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 72

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 11/68 (16%), Positives = 28/68 (41%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
           E   +  +    + D +  G +S KE   ++   G      + + + +  D++G G +  
Sbjct: 10  EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 69

Query: 212 DELAALLA 219
           +E   ++ 
Sbjct: 70  EEFLVMMV 77

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.9 bits (85), Expect = 6e-04
 Identities = 13/60 (21%), Positives = 21/60 (35%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS 183
             FD+ D      I  K   +          K     I+  VD +  G + F+EF  ++ 
Sbjct: 18  AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 77

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 43.0 bits (101), Expect = 3e-06
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
             +  + D N DG +  +E   ++ A G  +  +  EEL K  DKN DG +  DE    +
Sbjct: 18  SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 5/73 (6%)

Query: 117 EDSDADSE-----VFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDG 171
           +DS   +E     +F + D ++   I  +              +     ++   D N DG
Sbjct: 7   DDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 66

Query: 172 QLSFKEFSDLISA 184
           ++ + EF + +  
Sbjct: 67  RIDYDEFLEFMKG 79

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 42.1 bits (99), Expect = 4e-06
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFG-NQVAANKKEELFKAADKNGDGVVSVDELAAL 217
            R   + D N DG + F EF  ++   G   +   + EE  K AD++G+GV+ + E   L
Sbjct: 5   LRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDL 64

Query: 218 LA 219
           + 
Sbjct: 65  IK 66

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 6e-06
 Identities = 14/125 (11%), Positives = 34/125 (27%), Gaps = 9/125 (7%)

Query: 139 GKISLS------CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAAN 192
           GKI +        +    +E   S         D           +    S   +     
Sbjct: 22  GKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVY---KSFLMSLCPRP 78

Query: 193 KKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIHLTL 252
           + +E+F +        ++ + L   +  +Q    L +         +V  +++      +
Sbjct: 79  EIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGI 138

Query: 253 CFDEG 257
               G
Sbjct: 139 NAQRG 143

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 42.2 bits (99), Expect = 6e-06
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
                I D N DG +  +E  +++ A G  V     E+L K +DKN DG +  DE   ++
Sbjct: 12  ANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 71

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.8 bits (85), Expect = 4e-04
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 5/73 (6%)

Query: 117 EDSDADSE-----VFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDG 171
           ED+   SE      F + D ++   I  +              +     ++   D N DG
Sbjct: 1   EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 60

Query: 172 QLSFKEFSDLISA 184
           ++ F EF  ++  
Sbjct: 61  RIDFDEFLKMMEG 73

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 41.8 bits (98), Expect = 9e-06
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
             + +   RI    D N DG++S  E  D +      V  ++   +    D +GDG +S 
Sbjct: 2   PQDIADRERIFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAEIDTDGDGFISF 60

Query: 212 DELAALLALQQEKE 225
           DE        +   
Sbjct: 61  DEFTDFARANRGLV 74

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 1e-05
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 2/100 (2%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P      FA  + ++ D N+DG++ F EF   +S         K    FK  D + DG +
Sbjct: 54  PFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYI 113

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIH 249
           + +E+  L  +    + + N   +  E       V+ +  
Sbjct: 114 TRNEM--LDIVDAIYQMVGNTVELPEEENTPEKRVDRIFA 151

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.3 bits (101), Expect = 2e-05
 Identities = 21/90 (23%), Positives = 39/90 (43%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P  + + FA  + ++ D + +G + F+EF  ++S         K    F+  D N DG +
Sbjct: 57  PFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYI 116

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLE 239
           + DE+  ++A   +    M        T E
Sbjct: 117 TFDEMLTIVASVYKMMGSMVTLNEDEATPE 146

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.3 bits (88), Expect = 0.001
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 12/103 (11%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI- 182
            +F + D  ++  I  +  ++        T +        + D N DG ++F E   ++ 
Sbjct: 67  HLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA 126

Query: 183 ---SAFGNQVAANKKE--------ELFKAADKNGDGVVSVDEL 214
                 G+ V  N+ E        ++FK  DKN DG +++DE 
Sbjct: 127 SVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
           E E    + +  ++D +  G ++F E  D +   G+++  ++ ++L  AAD +  G +  
Sbjct: 19  EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78

Query: 212 DE-LAALL 218
            E +AA +
Sbjct: 79  GEFIAATV 86

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 41.5 bits (97), Expect = 3e-05
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFG---NQVAANKKEELFKAADKNGDGVVSVDELA 215
           +++  I+D ++ G +   E   ++  F      ++A + + L  A DK+GDG + V+E +
Sbjct: 44  KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103

Query: 216 ALLA 219
            L+A
Sbjct: 104 TLVA 107

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 168 NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
                   K+F  ++        A+  +++F   DK+  G +  DEL ++L
Sbjct: 19  TAADSFDHKKFFQMVGLKKKS--ADDVKKVFHILDKDKSGFIEEDELGSIL 67

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (93), Expect = 4e-05
 Identities = 12/68 (17%), Positives = 32/68 (47%)

Query: 152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSV 211
           E + +  +   ++ D + +G +S  E + ++ + G   +  +  +L    D +G+  +  
Sbjct: 6   EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65

Query: 212 DELAALLA 219
            E  AL++
Sbjct: 66  SEFLALMS 73

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 166 DYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKAADKNGDGVVSVDELAALLAL 220
           D+++ GQLS +E   ++       +A KK E  F   D +    +S  E   L+ L
Sbjct: 263 DFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 5e-05
 Identities = 15/60 (25%), Positives = 30/60 (50%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
            +   + D ++ G++SFK    +    G  +   + +E+   AD++GDG VS  E   ++
Sbjct: 82  LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 40.3 bits (94), Expect = 5e-05
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE---LFKAADKNGDGVVSVDELA 215
           +++   +D +  G +  +E   ++ +F          E     KAADK+GDG + +DE  
Sbjct: 44  KKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFE 103

Query: 216 ALLA 219
            L+ 
Sbjct: 104 TLVH 107

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 40.3 bits (94), Expect = 6e-05
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 166 DYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
               +G  + K+F  L+        AN  +++FKA D +  G +  +EL  +L
Sbjct: 17  AVKAEGSFNHKKFFALVGLKAMS--ANDVKKVFKAIDADASGFIEEEELKFVL 67

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 41.5 bits (96), Expect = 6e-05
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
                I D N DG +  +E  +++ A G  V     E+L K +DKN DG +  DE   ++
Sbjct: 99  ANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 4/94 (4%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS 183
             FD+ D      I  K   +          K     I+  VD +  G + F+EF  ++ 
Sbjct: 24  AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 83

Query: 184 AFGNQVAANKKEE----LFKAADKNGDGVVSVDE 213
               + A  K EE     F+  DKN DG + ++E
Sbjct: 84  RQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 117

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.9 bits (93), Expect = 7e-05
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDELA 215
           + I   +D +Q G L   E    +  F     ++  ++ + L  AAD +GDG +  DE  
Sbjct: 44  KDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQ 103

Query: 216 ALL 218
            ++
Sbjct: 104 EMV 106

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 39.9 bits (93), Expect = 8e-05
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE---LFKAADKNGDGVVSVDELA 215
           ++   ++D ++ G +   E    +  F     A    E        DK+GDG++ VDE A
Sbjct: 43  KKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFA 102

Query: 216 ALL 218
           A++
Sbjct: 103 AMI 105

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.7 bits (94), Expect = 9e-05
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
             +  + D N DG +  +E   ++ A G  +  +  EEL K  DKN DG +  DE    +
Sbjct: 94  SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 153

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 16/87 (18%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK------------- 194
            D ++  +   +    + D N DG L  +E   L +    +V   K              
Sbjct: 8   LDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL 67

Query: 195 ---EELFKAADKNGDGVVSVDELAALL 218
              E + K  D N D +V+++E  A  
Sbjct: 68  RMREHVMKNVDTNQDRLVTLEEFLAST 94

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 164 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
           I  +   G   +K F  L+   G      + +E+F+  DK+  G +  +EL  +L
Sbjct: 15  ISAFKDPGTFDYKRFFHLVGLKGKT--DAQVKEVFEILDKDQSGFIEEEELKGVL 67

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDELA 215
           + +  I+D +Q G +  +E   ++  F   G  +   + + L  A D + DG +  DE A
Sbjct: 44  KEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFA 103

Query: 216 ALLA 219
            ++A
Sbjct: 104 KMVA 107

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 1e-04
 Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 11/132 (8%)

Query: 124 EVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQ-DGQLSFKEF 178
             F  L P     +      ++     +  P      F  RI  +   +     LSF++F
Sbjct: 21  RRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDF 80

Query: 179 SDLISAFGNQV-AANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGET 237
            DL+S F +      K    F+  D + DG ++ ++L+ L+     +             
Sbjct: 81  LDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSAS---- 136

Query: 238 LEVADMVNTMIH 249
            E+  +++ ++ 
Sbjct: 137 -EMKQLIDNILE 147

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.1 bits (88), Expect = 1e-04
 Identities = 14/60 (23%), Positives = 32/60 (53%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
           R    + D + +G +S  E   +++  G ++   + +E+ + AD +GDG V+ +E   ++
Sbjct: 6   REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 2/100 (2%)

Query: 150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 209
           P      FA  +    D N DG + F+EF   +S         K +  F   D +G+G +
Sbjct: 53  PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYI 112

Query: 210 SVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTMIH 249
           S  E+  ++    +    +   P    T E       +  
Sbjct: 113 SKAEMLEIVQAIYKMVSSVMKMPEDESTPE--KRTEKIFR 150

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 37.9 bits (87), Expect = 7e-04
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS 183
           E F L D      I  K   +          ++  + +++ VD + +G + F EF  L++
Sbjct: 13  EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA 72

Query: 184 AFGNQVAANKK-EELFKAADKNGDGVVSVDEL 214
               +  + ++  E FK  D++G+G++S  EL
Sbjct: 73  RKMKEQDSEEELIEAFKVFDRDGNGLISAAEL 104

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 12/60 (20%), Positives = 32/60 (53%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL 218
                + D + +G +S  E   +++  G ++  ++ +E+ + AD +GDG ++ +E   ++
Sbjct: 85  IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 144

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 38.8 bits (89), Expect = 7e-04
 Identities = 16/71 (22%), Positives = 32/71 (45%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 207
           ++     + +   +  IVD +Q+G ++  E+     A G   ++   EE F+  D +  G
Sbjct: 97  KNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESG 156

Query: 208 VVSVDELAALL 218
            + VDE+    
Sbjct: 157 QLDVDEMTRQH 167

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 38.5 bits (88), Expect = 8e-04
 Identities = 17/140 (12%), Positives = 41/140 (29%), Gaps = 5/140 (3%)

Query: 80  QTCRTAISDNTDKPIWNSEKKLLLETNGPHVARISVFEDSDADSEVFDLLDPSSSNKIVG 139
           +   T   +     + +++ K +  +       +    D + D  V              
Sbjct: 32  EDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSW---EEYLAMWEK 88

Query: 140 KISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK 199
            I+   SV D     ++    +   +D + DG +  +EF +    F   +       ++ 
Sbjct: 89  TIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYN 146

Query: 200 AADKNGDGVVSVDELAALLA 219
                G     ++    L  
Sbjct: 147 VITDGGKVTFDLNRYKELYY 166

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 171 GQLSFKEFSDLISAFGNQVAANKKE--ELFKAADKNGDGVVSVDELAALLA 219
            QLS +E   LI A    +    +   +LF+  DKNGDG VS +E   L+ 
Sbjct: 24  NQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVK 74

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 146 SVEDPIETEKSFARRILSIVDYN-QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKN 204
           +VE   E +K+  +    I     +DG +S KE   ++   G      + +E+    D++
Sbjct: 5   AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED 64

Query: 205 GDGVVSVDELAALLA 219
           G G V  DE   ++ 
Sbjct: 65  GSGTVDFDEFLVMMV 79

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 8/55 (14%), Positives = 25/55 (45%)

Query: 159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 213
            +   + D    G++S  +   +++  G ++   + +EL K  + + +G +   +
Sbjct: 4   VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 58

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 17/62 (27%), Positives = 21/62 (33%)

Query: 170 DGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMN 229
            G L   EF        N+ A    E +F+A D NGD  +   E  A L L         
Sbjct: 36  SGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK 95

Query: 230 CC 231
             
Sbjct: 96  LK 97

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS 183
           E F L D      I  K   +          ++  + +++ VD + +G + F EF  +++
Sbjct: 12  EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 36.9 bits (84), Expect = 0.003
 Identities = 12/71 (16%), Positives = 25/71 (35%)

Query: 148 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 207
            +     + +   +  I D +  G ++  E+       G   +    E  F+  D +  G
Sbjct: 99  RNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAG 158

Query: 208 VVSVDELAALL 218
            + VDE+    
Sbjct: 159 DLDVDEMTRQH 169

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 1/102 (0%)

Query: 124 EVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS 183
           E F L D  ++  I      +      +   ++    +++ +D + + Q+ F EF  L+S
Sbjct: 14  EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73

Query: 184 AFGNQV-AANKKEELFKAADKNGDGVVSVDELAALLALQQEK 224
                  +  +  E FK  DKNGDG++S  EL  +L    EK
Sbjct: 74  RQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 115

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	547
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.4
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.38
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.37
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.36
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.31
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.31
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.29
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.29
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.28
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.28
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.25
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.24
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.24
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.24
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.23
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.23
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.23
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.23
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.23
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.22
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.22
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.21
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.21
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.19
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.19
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.19
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.17
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.15
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.14
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.14
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.13
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.13
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.12
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.12
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.08
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.07
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.07
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.07
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.06
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.05
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.05
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.05
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.04
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.04
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.03
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.02
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.01
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.01
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.0
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	98.99
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	98.97
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	98.95
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.94
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	98.94
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.93
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	98.9
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.9
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	98.9
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.89
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	98.86
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.86
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	98.86
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.86
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.85
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	98.83
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	98.83
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.83
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	98.82
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.81
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	98.81
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	98.8
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	98.79
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.78
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	98.78
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	98.77
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	98.77
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	98.77
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	98.76
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	98.72
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.71
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.7
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.69
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.68
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.68
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	98.67
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	98.67
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.66
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.65
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.65
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	98.64
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.64
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	98.64
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.63
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.61
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	98.61
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.61
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	98.6
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.6
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	98.59
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	98.59
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.55
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.55
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	98.54
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.54
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.53
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	98.53
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.53
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	98.51
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	98.51
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.51
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.5
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.42
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.41
d2ep6a1	126	Multiple C2 and transmembrane domain-containing pr	98.41
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	98.4
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	98.38
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	98.37
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.34
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.31
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	98.3
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	98.28
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.27
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	98.25
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	98.24
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	98.23
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.18
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	98.18
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.13
d1wfja_	136	C2 domain protein At1g63220 {Thale cress (Arabidop	98.11
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.07
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.06
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	97.99
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	97.98
d2nq3a1	133	E3 ubiquitin-protein ligase Itchy {Human (Homo sap	97.97
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	97.96
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	97.89
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	97.89
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	97.89
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	97.87
d1gmia_	136	Domain from protein kinase C epsilon {Rat (Rattus	97.83
d1rlwa_	126	Domain from cytosolic phospholipase A2 {Human (Hom	97.83
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	97.82
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	97.79
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	97.77
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	97.76
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.75
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	97.73
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	97.72
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	97.71
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	97.67
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	97.64
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	97.62
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	97.62
d1a25a_	132	C2 domain from protein kinase c (beta) {Rat (Rattu	97.57
d1dqva1	130	Synaptotagmin III {Rat (Rattus norvegicus) [TaxId:	97.52
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	97.52
d1qasa2	131	PI-specific phospholipase C isozyme D1 (PLC-D1), C	97.48
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.46
d2cjta1	128	Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId:	97.44
d1wfma_	138	Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9	97.34
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	97.33
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	97.32
d1ugka_	138	Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960	97.3
d1rsya_	143	Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10	97.28
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	97.24
d1rh8a_	142	Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]}	97.16
d2bwqa1	125	Regulating synaptic membrane exocytosis protein, r	96.99
d1w15a_	138	Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId:	96.97
d2cm5a1	137	C2b-domain of rabphilin {Rat (Rattus norvegicus) [	96.94
d1dqva2	145	Synaptotagmin III {Rat (Rattus norvegicus) [TaxId:	96.81
d1bdya_	123	Domain from protein kinase C delta {Rat (Rattus no	96.74
d1uowa_	157	Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10	96.53
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	96.43
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	96.43
d2zkmx2	122	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	96.26
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	95.74
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	95.52
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	95.05
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	94.91
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	91.51
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	90.24
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	87.84
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	87.73
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	87.48
d1gpra_	158	Glucose permease IIa domain, IIa-glc {Bacillus sub	85.08
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	80.28

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.40  E-value=3.6e-13  Score=119.37  Aligned_cols=112  Identities=17%  Similarity=0.219  Sum_probs=84.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~  196 (547)
                      ++++|..+|.|++|.|    +..++..++. .++..+   +..++    .+++|.|++.||..++.. +....+.+++..
T Consensus         9 ~~~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~~~~e---l~~~~----~~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~   80 (142)
T d1wdcb_           9 MKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKE---LTAML----KEAPGPLNFTMFLSIFSDKLSGTDSEETIRN   80 (142)
T ss_dssp             HHHHHHHHCTTCSSSCCHHHHHHHHHHHSS-CCCHHH---HHHHH----TTSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             HHHHHHHHcCCCCCcCChHHHHHHHHHhhc-CCCHHH---HHHHH----HhccCccccccccccccccccccchhhhHHH
Confidence            8899999999999999    6777787776 566666   55555    366788888888887765 455556778888


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccC
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      +|+.+|.|++|+|+.+||.+++..++....+    ..+.++++..|..+
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~----~e~~~l~~~~d~~~  125 (142)
T d1wdcb_          81 AFAMFDEQETKKLNIEYIKDLLENMGDNFNK----DEMRMTFKEAPVEG  125 (142)
T ss_dssp             HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCH----HHHHHHHHHCCEET
T ss_pred             hhhhhcccCCCcccHHHHHHHHHHccccCCH----HHHHHHHHHhCCCC
Confidence            8888888888888888888888888765444    45667776666543

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.38  E-value=4.6e-13  Score=118.90  Aligned_cols=119  Identities=29%  Similarity=0.378  Sum_probs=70.8

Q ss_pred             ccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-cc
Q 008959          116 FEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-QV  189 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~  189 (547)
                      ++.+.+ ++++|+.+|.|++|.|    +..++...+. .+++.+   +..++..++.++.+.+++++|...+..... ..
T Consensus         5 s~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (146)
T d1lkja_           5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAE---VNDLMNEIDVDGNHQIEFSEFLALMSRQLKSND   80 (146)
T ss_dssp             CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTC-CCCHHH---HHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCC
T ss_pred             CHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCC-CCCHHH---HHHHHHHhccCCcccccHHHHHHHHHHhhcccc
Confidence            333444 8889999999999988    5566665554 454444   555555566666666666666665554322 23


Q ss_pred             hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          190 AANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       190 ~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                      +.++++++|+.+|.|++|+|+.+||.+++..++.....    ..+.+++...|
T Consensus        81 ~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~~~~~~~~~~d  129 (146)
T d1lkja_          81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD----AEVDDMLREVS  129 (146)
T ss_dssp             HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCH----HHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccH----HHHHHHHHhcc
Confidence            34556666666666666666666666666665554433    33455555444

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.37  E-value=1.2e-12  Score=111.21  Aligned_cols=95  Identities=17%  Similarity=0.372  Sum_probs=80.4

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEE  196 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel~~  196 (547)
                      ++.++++.+|.  +|.| +.+++..++....++++   ++.+|+.||.|++|+|+.+||..++..+   |..++++++++
T Consensus        10 di~~~~~~~~~--~G~idf~eF~~~~~~~~~~~~~---l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~   84 (109)
T d5pala_          10 DINKAISAFKD--PGTFDYKRFFHLVGLKGKTDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKA   84 (109)
T ss_dssp             HHHHHHHHTCS--TTCCCHHHHHHHHTCTTCCHHH---HHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHH
T ss_pred             HHHHHHHhcCC--CCcCcHHHHHHHHHhcCCCHHH---HHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHH
Confidence            37788887765  4678 88887666544444555   9999999999999999999999999875   67789999999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          197 LFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +|+.+|.|+||.|+|+||.++|.+
T Consensus        85 ~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          85 LLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             HHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCEeHHHHHHHHHh
Confidence            999999999999999999999865

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.36  E-value=7.8e-13  Score=112.29  Aligned_cols=94  Identities=19%  Similarity=0.397  Sum_probs=79.3

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel~~~  197 (547)
                      +.++++.+|  ++|.| +.+++..++....++++   ++.+|+.+|.|++|+|+.+||..++..+   |..+++++++++
T Consensus        11 I~~~~~~~d--~dG~idf~EF~~~~~~~~~~~~~---~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~   85 (109)
T d1pvaa_          11 IKKALDAVK--AEGSFNHKKFFALVGLKAMSAND---VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAF   85 (109)
T ss_dssp             HHHHHHHTC--STTCCCHHHHHHHHTCTTSCHHH---HHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHH
T ss_pred             HHHHHHhcC--CCCCCcHHHHHHHHHHccCCHHH---HHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHH
Confidence            666776665  55778 88887666554445555   8999999999999999999999999876   567899999999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHh
Q 008959          198 FKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      |+.+|.|+||.|+++||.++|.+
T Consensus        86 ~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          86 LKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHCCCCcCcEeHHHHHHHHHh
Confidence            99999999999999999999864

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.31  E-value=2e-12  Score=114.30  Aligned_cols=112  Identities=20%  Similarity=0.315  Sum_probs=90.5

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-C--CcchHHH
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-G--NQVAANK  193 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g--~~~~~ee  193 (547)
                      +++++|..||.|++|.|    +..++..++. .++..+   +.    .++.+++|.|+++||..++... .  .....++
T Consensus         6 ~fke~F~~~D~d~dG~I~~~el~~~l~~lg~-~~t~~e---i~----~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~   77 (140)
T d1ggwa_           6 PYKQAFSLFDRHGTGRIPKTSIGDLLRACGQ-NPTLAE---IT----EIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEE   77 (140)
T ss_dssp             TTHHHHHHTCSSSSSEECHHHHHHHHHHTSC-CCCHHH---HH----HHHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHH
T ss_pred             HHHHHHHHHCCCCCCeECHHHHHHHHHHHHh-hhHHHh---hh----hhhccccccccchhhhhhhhhhhhcchhhHHHH
Confidence            38899999999999999    7777888876 677666   33    3578899999999999998653 2  2335678


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhccc
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMV  244 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~  244 (547)
                      +.++|+.+|.|++|+|+.+||.++|..++.....    ..+.++++..|..
T Consensus        78 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~----~e~~~l~~~~d~~  124 (140)
T d1ggwa_          78 FVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSN----EEMDELLKGVPVK  124 (140)
T ss_dssp             HHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCH----HHHHHHHHHTTCS
T ss_pred             HHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCH----HHHHHHHHhhCCC
Confidence            9999999999999999999999999999876654    4677887777754

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.31  E-value=1.4e-12  Score=117.02  Aligned_cols=62  Identities=29%  Similarity=0.544  Sum_probs=47.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      ++.+|+.+|.|++|.|+.+||..++..+|..+++++++++|+.+|.|+||.|+++||+++|+
T Consensus        93 l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~  154 (156)
T d1dtla_          93 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK  154 (156)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            66778888888888888888887777777777777888888888888888888888877774

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=8.3e-12  Score=109.39  Aligned_cols=116  Identities=20%  Similarity=0.294  Sum_probs=70.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      ++++|..+|.|++|.|    +..++...+. .++...   +..++..+|.+++|.|++.||...+... ......+++..
T Consensus         8 lk~~F~~~D~~~~G~Is~~e~~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~   83 (141)
T d2obha1           8 IREAFDLFDADGTGTIDVKELKVAMRALGF-EPKKEE---IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILK   83 (141)
T ss_dssp             HHHHHHTTCTTCCSEEEGGGHHHHHHHTTC-CCCHHH---HHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCeEeHHHHHHHHHhcCC-chhHHH---HHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHHHH
Confidence            7777777777777777    5555554443 444444   5666666677777777777776666442 11223455666


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccC
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      +|..+|.+++|.|+.+||..++..++.....    ..+.++++..|.++
T Consensus        84 ~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~----~e~~~l~~~~D~d~  128 (141)
T d2obha1          84 AFKLFDDDETGKISFKNLKRVAKELGENLTD----EELQEMIDEADRDG  128 (141)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHTTCCCCH----HHHHHHHHHHCTTS
T ss_pred             HHHHhcccCCCCccHHHHHHHHHHhCCCCCH----HHHHHHHHHHCCCC
Confidence            7777777777777777777776666544333    34556665555433

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.29  E-value=6.7e-12  Score=110.88  Aligned_cols=117  Identities=27%  Similarity=0.410  Sum_probs=91.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-CCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-GNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~  196 (547)
                      ++++|..+|.|++|.|    +..++...+. .++...   +..+|+.+|.+++|.|+++||..++... ......++++.
T Consensus        11 l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~   86 (146)
T d1exra_          11 FKEAFALFDKDGDGTITTKELGTVMRSLGQ-NPTEAE---LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIE   86 (146)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHTC-CCCHHH---HHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCeECHHHHHHHHHhcCC-CCCHHH---HHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHH
Confidence            8899999999999998    5556666654 555655   8889999999999999999999988652 22234568899


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +|+.+|.|++|.|+.+||.+++...+.....    ..+.++++..|.+++
T Consensus        87 ~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~----~~~~~i~~~~D~d~d  132 (146)
T d1exra_          87 AFKVFDRDGNGLISAAELRHVMTNLGEKLTD----DEVDEMIREADIDGD  132 (146)
T ss_dssp             HHHHHSTTCSSCBCHHHHHHHHHHTTCCCCH----HHHHHHHHHHCSSSS
T ss_pred             HHHHhCCCCCCcCCHHHHHHHHHHHhhcCCH----HHHHHHHHHhCCCCC
Confidence            9999999999999999999999887765443    457777777775544

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.28  E-value=7.5e-12  Score=112.65  Aligned_cols=113  Identities=22%  Similarity=0.381  Sum_probs=59.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----CCcchHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----GNQVAANK  193 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g~~~~~ee  193 (547)
                      ++++|+.+|.|++|.|    +..++..++. .+....   +..++..+|.+++|.+++.||...+...    ......++
T Consensus        22 l~~~F~~~D~d~~G~Is~~el~~~l~~~~~-~~~~~~---~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   97 (162)
T d1topa_          22 FKAAFDMFDADGGGDISTKELGTVMRMLGQ-NPTKEE---LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEE   97 (162)
T ss_dssp             HHHHHHTTTCSCSSEEEGGGHHHHHHHTTC-CCCHHH---HHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCeEcHHHHHHHHhccCC-chhHHH---HHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCcHHH
Confidence            6777777777777777    4444444433 333333   5555555566666666665555544321    11123344


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhc
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVAD  242 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D  242 (547)
                      ++.+|+.+|.|++|+|+.+||.+++...+.....    ..+..++...|
T Consensus        98 ~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~----~~~~~l~~~~D  142 (162)
T d1topa_          98 LANCFRIFDKNADGFIDIEELGEILRATGEHVTE----EDIEDLMKDSD  142 (162)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCH----HHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCH----HHHHHHHHHhC
Confidence            5555666666666666666666555554433322    23555555444

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.28  E-value=5.1e-12  Score=112.11  Aligned_cols=111  Identities=15%  Similarity=0.167  Sum_probs=69.2

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cCCcchHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~~~~~eel~~  196 (547)
                      ++++|..+|.+++|.|    +..++..++...++.+.       +..++.+++|.|++.||..++.. +......+++..
T Consensus         9 l~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~-------~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   81 (145)
T d2mysb_           9 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE-------LDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMG   81 (145)
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHH-------HHHHHHhccCceeechhhhhhhhcccccchHHHHHH
Confidence            7888999999999998    66667777653332222       23344556666777777766644 333344556666


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~  243 (547)
                      +|+.+|.+++|+|+.+||.++++.++...++    ..+.+++...|.
T Consensus        82 aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~----~e~~~~~~~~d~  124 (145)
T d2mysb_          82 AFKVLDPDGKGSIKKSFLEELLTTGGGRFTP----EEIKNMWAAFPP  124 (145)
T ss_pred             HHHhhhhcccchhhHHHHHHHHHHcCCCCCH----HHHHHHHHHhCC
Confidence            7777777777777777777777666655443    345555554443

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.25  E-value=7e-12  Score=110.75  Aligned_cols=116  Identities=14%  Similarity=0.253  Sum_probs=91.7

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQD  170 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~d  170 (547)
                      ..+.++.+.++..+.            +..+..+|..+|.+++|.+ +.+++..+............++.+|+.+|.|++
T Consensus        17 ~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~   96 (146)
T d1exra_          17 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN   96 (146)
T ss_dssp             HHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCS
T ss_pred             HHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHHHhCCCCC
Confidence            344556666665443            2227889999999999999 665554432211112223458999999999999


Q ss_pred             CcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          171 GQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       171 G~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      |.|+.+||..++..+|..++.+++.++|+.+|.|+||.|+++||.++|.
T Consensus        97 G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          97 GLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             SCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999884

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.24  E-value=4.1e-12  Score=97.38  Aligned_cols=61  Identities=23%  Similarity=0.547  Sum_probs=59.4

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      ++.+|+.||.|++|+|+.+||..++..+|...++++++.+|+.+|.|++|.|+|+||.++|
T Consensus         5 l~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           5 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            8999999999999999999999999999999999999999999999999999999999874

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.24  E-value=3.5e-12  Score=113.16  Aligned_cols=113  Identities=20%  Similarity=0.297  Sum_probs=54.6

Q ss_pred             HHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHH-hhcCCCCCcccHHHHHHHHHhc------CCcchH
Q 008959          123 SEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILS-IVDYNQDGQLSFKEFSDLISAF------GNQVAA  191 (547)
Q Consensus       123 ~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~-~~D~d~dG~Is~~Ef~~~l~~l------g~~~~~  191 (547)
                      +++|..+|.|++|.|    +..++..++. .++.++   ++.++. ..+.+.+|.|+++||..++...      ......
T Consensus         5 k~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~s~~e---i~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~   80 (146)
T d1m45a_           5 KDIFTLFDKKGQGAIAKDSLGDYLRAIGY-NPTNQL---VQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKT   80 (146)
T ss_dssp             TTCHHHHCTTCCSEEEGGGHHHHHHHTTC-CCCHHH---HHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCT
T ss_pred             HHHHHHHcCCCcCCCCHHHHHHHHHHcCC-chhHHH---HhhhhccccccccccccccchhhhhhhhhcccccccccchH
Confidence            455666666666666    5555555544 444444   444443 2333444555555555554321      111223


Q ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcc
Q 008959          192 NKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADM  243 (547)
Q Consensus       192 eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~  243 (547)
                      +++.++|+.+|.|++|+|+.+||..+|..++...++    ..+.+++...|.
T Consensus        81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~----~ei~~l~~~~D~  128 (146)
T d1m45a_          81 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTD----AEVDELLKGVEV  128 (146)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCH----HHHHHHHTTCCC
T ss_pred             HHHHHHHHhhccccccccchhhhhhhhcccCCcchH----HHHHHHHHHhCC
Confidence            445555555555555555555555555555443332    234455554443

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.24  E-value=1.1e-11  Score=99.23  Aligned_cols=70  Identities=16%  Similarity=0.373  Sum_probs=65.6

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++++...++++|+.||.|++|.|+..||..+|..+|..++++++.++|..+|.|++|.|+++||..+|.+
T Consensus         9 t~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_           9 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4666666999999999999999999999999999999999999999999999999999999999999865

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.23  E-value=9e-12  Score=96.01  Aligned_cols=63  Identities=29%  Similarity=0.545  Sum_probs=60.9

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++++|+.+|.|++|.|+..||..++..+|..+++++++++|+.+|.|+||.|+++||.++|.+
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            688999999999999999999999999999999999999999999999999999999999865

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.23  E-value=1.3e-11  Score=97.38  Aligned_cols=63  Identities=30%  Similarity=0.527  Sum_probs=61.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.||.|++|+|+.+||..+|..+|..++.++++++|+.+|.|++|.|+|+||+++|..
T Consensus        11 l~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~   73 (75)
T d1jc2a_          11 LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG   73 (75)
T ss_dssp             HHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999864

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.23  E-value=8.1e-12  Score=97.95  Aligned_cols=71  Identities=18%  Similarity=0.417  Sum_probs=66.4

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .++++...++++|+.+|.|++|.|+..||..++..+|..++++++.++|+.+|.|++|.|+++||..+|..
T Consensus         2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            45677777999999999999999999999999999999999999999999999999999999999999854

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.23  E-value=1.5e-11  Score=104.13  Aligned_cols=95  Identities=19%  Similarity=0.410  Sum_probs=77.3

Q ss_pred             HHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC---CcchHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG---NQVAANKKEE  196 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg---~~~~~eel~~  196 (547)
                      ++.+++..++.+  |.| +.+++..+.....++++   ++.+|+.+|.|++|+|+.+||..++..++   ..+++++++.
T Consensus        10 ~i~~~~~~~~~~--~~i~f~eF~~~~~~~~~~~~~---~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~   84 (109)
T d1rwya_          10 DIKKAIGAFTAA--DSFDHKKFFQMVGLKKKSADD---VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKT   84 (109)
T ss_dssp             HHHHHHHTTCST--TCCCHHHHHHHHTGGGSCHHH---HHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHH
T ss_pred             HHHHHHHhcccC--CCcCHHHHHHHHccccCCHHH---HHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHH
Confidence            377777777554  566 67765555433333444   89999999999999999999999998864   4578999999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          197 LFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +|+.+|.|+||.|+++||.++|++
T Consensus        85 ~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          85 LMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHhCCCCCCeEeHHHHHHHHHh
Confidence            999999999999999999999965

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.23  E-value=1.4e-11  Score=109.99  Aligned_cols=109  Identities=21%  Similarity=0.311  Sum_probs=69.7

Q ss_pred             HHHHHHhhCC--CCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-C-CcchHHH
Q 008959          122 DSEVFDLLDP--SSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-G-NQVAANK  193 (547)
Q Consensus       122 l~~~F~~~D~--d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-g-~~~~~ee  193 (547)
                      ++++|..||.  |++|.|    +..++..++. .+++.+   +..+ ...|.+++|.|+++||..++..+ . ...+.++
T Consensus         9 l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~-~~t~~e---~~~~-~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~   83 (152)
T d1wdcc_           9 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGI-NPRNED---VFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFAD   83 (152)
T ss_dssp             HHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTC-CCCHHH---HHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHH
T ss_pred             HHHHHHHHCcCCCCCCeECHHHHHHHHHHhcc-CccHhh---hhhh-hhhhccccccccccccccccccccccchhHHHh
Confidence            6777777773  677777    6666666665 555555   4433 33466677777777777776553 2 2344566


Q ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHh
Q 008959          194 KEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLE  239 (547)
Q Consensus       194 l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~  239 (547)
                      +.++|+.+|.|++|+|+.+||.++|..++...++    ..+.++++
T Consensus        84 l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~----~e~~~l~~  125 (152)
T d1wdcc_          84 YMEAFKTFDREGQGFISGAELRHVLTALGERLSD----EDVDEIIK  125 (152)
T ss_dssp             HHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCH----HHHHHHHH
T ss_pred             hhhhhhccccccCccchHHHHHHHHHHcCCCCCH----HHHHHHHH
Confidence            7777777777777777777777777777665543    33455544

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.22  E-value=1.4e-11  Score=98.70  Aligned_cols=69  Identities=26%  Similarity=0.475  Sum_probs=63.4

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +++...++++|+.+|.|++|.|+..||..++..+| ..+.+++.++|+.+|.|++|.|+++||..++...
T Consensus         2 ~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           2 PQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            45566699999999999999999999999999998 5788999999999999999999999999998764

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.22  E-value=1.9e-11  Score=108.09  Aligned_cols=112  Identities=29%  Similarity=0.366  Sum_probs=89.2

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCC--CCCcccHHHHHHHHHhcC-C--cch
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYN--QDGQLSFKEFSDLISAFG-N--QVA  190 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d--~dG~Is~~Ef~~~l~~lg-~--~~~  190 (547)
                      ++++++|+.+|.|++|.|    +..++..++. .++..+   +..++..+|.+  ++|.|+++||..++.... .  ...
T Consensus         4 eelke~F~~~D~d~~G~I~~~el~~~l~~lg~-~~~~~e---~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~   79 (145)
T d2mysc_           4 DDFKEAFLLFDRTGDAKITASQVGDIARALGQ-NPTNAE---INKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGT   79 (145)
T ss_pred             HHHHHHHHHHcCCCCCeECHHHHHHHHHHhhh-cchhhh---hHHHHHHHhhcccccCccchhHHHHHHhhhhhccccch
Confidence            448999999999999999    6777777776 666666   77777777655  689999999999987632 2  235


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHh
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLE  239 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~  239 (547)
                      .+++.++|+.+|.|++|+|+.+||.++|..++.....    ..+.++++
T Consensus        80 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~e~~~l~~  124 (145)
T d2mysc_          80 FEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTE----EEVEELMK  124 (145)
T ss_pred             HHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCH----HHHHHHHh
Confidence            6679999999999999999999999999998865543    34666664

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.21  E-value=9.5e-12  Score=98.55  Aligned_cols=72  Identities=17%  Similarity=0.350  Sum_probs=67.6

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.++++...++++|+.+|.|++|+|+..||..+|..+|..++.+++.++|..+|.|++|.|+++||..+|.+
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_           3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            567778778999999999999999999999999999999999999999999999999999999999998843

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.21  E-value=2.3e-11  Score=102.65  Aligned_cols=93  Identities=15%  Similarity=0.348  Sum_probs=77.6

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC---CcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG---NQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg---~~~~~eel~~~  197 (547)
                      +..+++..|.++  .+ +.+++..++....+.++   ++.+|+.+|.|++|+|+..||..++..++   ..+++++++++
T Consensus        10 i~~~~~~~~~~g--si~~~eF~~~~~l~~~~~~~---l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l   84 (107)
T d2pvba_          10 VAAALAACSAAD--SFKHKEFFAKVGLASKSLDD---VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF   84 (107)
T ss_dssp             HHHHHHHTCSTT--CCCHHHHHHHHTGGGSCHHH---HHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred             HHHHHHhccCCC--CcCHHHHHHHHhcccCCHHH---HHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHH
Confidence            777788777654  47 77776655543344444   99999999999999999999999998874   46899999999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHH
Q 008959          198 FKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      |+.+|.|+||.|+++||.++|+
T Consensus        85 ~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          85 LADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHhCCCCCCcEeHHHHHHHHc
Confidence            9999999999999999999885

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.19  E-value=2.1e-11  Score=96.51  Aligned_cols=65  Identities=17%  Similarity=0.398  Sum_probs=62.2

Q ss_pred             HHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          157 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       157 ~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .++++|+.+|.|++|+|+.+||..+|..++..++.+++.++|+.+|.|++|.|+++||.++|++.
T Consensus        10 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~   74 (77)
T d1oqpa_          10 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT   74 (77)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcc
Confidence            39999999999999999999999999999999999999999999999999999999999999763

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.19  E-value=3e-11  Score=104.58  Aligned_cols=113  Identities=18%  Similarity=0.262  Sum_probs=87.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCc-c--hHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQ-V--AANKK  194 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~-~--~~eel  194 (547)
                      .+.+|+.+|.|++|.|    +..++..++. .+++.+   ++.+|+.+|.+++|.|+++||..++...... .  ....+
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~-~~~~~~---~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~   77 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQL---LQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGL   77 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCC-SSHHHH---HHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHH
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHhhhcccccccccccccccccccccccccccccc
Confidence            3579999999999999    6666666654 444444   8899999999999999999999988764332 2  34568


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +.+|+.+|.|++|+|+.+||.+++..++.        ..+.+++...|.+++
T Consensus        78 ~~~F~~~D~~~~g~i~~~el~~~~~~~~~--------~~~~~~~~~~D~d~d  121 (134)
T d1jfja_          78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGI--------EKVAEQVMKADANGD  121 (134)
T ss_dssp             HHHHHHHCCSSSSEEEHHHHHHHHTTTTC--------HHHHHHHHHHHCSSS
T ss_pred             cccccccccccCCcccHHHHHHHHHhcCc--------HHHHHHHHHHCCCCC
Confidence            89999999999999999999999866542        246666776666554

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.19  E-value=3.3e-11  Score=96.66  Aligned_cols=72  Identities=22%  Similarity=0.422  Sum_probs=66.5

Q ss_pred             CCChHHHHHHHHHHHhhcCCC-CCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          149 DPIETEKSFARRILSIVDYNQ-DGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~-dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ..++++...++++|..||.|+ +|.|+..||..+|..+|...++++++++|+.+|.|++|.|+|+||..+|.+
T Consensus         8 ~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1           8 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            356677777999999999995 799999999999999999999999999999999999999999999999864

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.17  E-value=2.7e-11  Score=96.93  Aligned_cols=63  Identities=29%  Similarity=0.512  Sum_probs=60.9

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.||.|++|+|+.+||..++..+|..++.+++..+|..+|.|+||.|+++||.++|+.
T Consensus        17 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             HHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999853

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=1.8e-10  Score=105.84  Aligned_cols=115  Identities=17%  Similarity=0.199  Sum_probs=88.4

Q ss_pred             cChHHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHH
Q 008959          117 EDSDADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAAN  192 (547)
Q Consensus       117 e~~~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~e  192 (547)
                      +...++..+|+.+|.|++|.|    +..++..+.....+.++   ++.+++.+|.|++|.|+++||..++..      ..
T Consensus        16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~---~~~l~~~~D~d~~g~i~~~EFl~~~~~------~~   86 (181)
T d1hqva_          16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVT---VRSIISMFDRENKAGVNFSEFTGVWKY------IT   86 (181)
T ss_dssp             SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHH---HHHHHHHHCCSSSSSBCHHHHHHHHHH------HH
T ss_pred             ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHH---HHHHhhccccccccchhhhHHHhhhhh------cc
Confidence            334449999999999999999    55555555543344555   888999999999999999999998864      34


Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhccc
Q 008959          193 KKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMV  244 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~  244 (547)
                      +++.+|+.+|.+++|.|+.+||.+++...+....+    ..+.+++...|..
T Consensus        87 ~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~----e~~~~~~~~~d~~  134 (181)
T d1hqva_          87 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD----QFHDILIRKFDRQ  134 (181)
T ss_dssp             HHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCH----HHHHHHHHHHCSS
T ss_pred             ccccccccccccccchhhhHHHHHHHHHcCCcchh----HHHHHHHHHhCCC
Confidence            67889999999999999999999999887765443    3566666666543

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.14  E-value=3.3e-11  Score=101.83  Aligned_cols=93  Identities=18%  Similarity=0.365  Sum_probs=75.4

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc---CCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l---g~~~~~eel~~~  197 (547)
                      +..+.+.++.+  |.+ +.+++..++....+.++   ++++|+.+|.|++|+|+.+||..++..+   +..+++++++++
T Consensus        11 I~~~l~~~~~~--~s~~~~~F~~~~~~~~~~~~~---l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~   85 (108)
T d1rroa_          11 IAAALQECQDP--DTFEPQKFFQTSGLSKMSASQ---VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSL   85 (108)
T ss_dssp             HHHHHHHTCST--TCCCHHHHHHHHSGGGSCHHH---HHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred             HHHHHHhcccC--CCccHHHHHHHHccCcCCHHH---HHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHH
Confidence            66666666544  456 77766555443344444   8999999999999999999999999886   456789999999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHH
Q 008959          198 FKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      |+.+|.|+||.|+++||.++|+
T Consensus        86 ~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          86 MDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHhCCCCCCeEeHHHHHHHHc
Confidence            9999999999999999999884

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2.8e-11  Score=106.01  Aligned_cols=111  Identities=23%  Similarity=0.301  Sum_probs=83.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcC--CCCCcccHHHHHHHHHhcCCc---chHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDY--NQDGQLSFKEFSDLISAFGNQ---VAAN  192 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~--d~dG~Is~~Ef~~~l~~lg~~---~~~e  192 (547)
                      ++++|..+|.|++|.|    +..++..++. .+++.+   +..++..++.  +++|.|++.||..++......   ...+
T Consensus         2 ~ke~F~~~D~d~~G~I~~~el~~~l~~lg~-~~t~~e---~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~   77 (139)
T d1w7jb1           2 FKEAFELFDRVGDGKILYSQCGDVMRALGQ-NPTNAE---VLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYE   77 (139)
T ss_dssp             HHHHHHHHCCSSSSEEESTTHHHHHHHTTC-CCCHHH---HHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHhCCCCCeECHHHHHHHHHHhcc-CCCHHH---HHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHH
Confidence            6789999999999999    7788888876 677766   7777776664  578899999998888763322   2345


Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhh
Q 008959          193 KKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEV  240 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~  240 (547)
                      ++.++|+.+|.|++|+|+.+||.+++..+|...++    ..+..++..
T Consensus        78 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~----~e~~~l~~~  121 (139)
T d1w7jb1          78 DYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTE----EEVETVLAG  121 (139)
T ss_dssp             CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCH----HHHHHHHTT
T ss_pred             HHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCH----HHHHHHHhh
Confidence            68888999999999999999999999888776554    345666655

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.13  E-value=1.4e-11  Score=95.25  Aligned_cols=63  Identities=30%  Similarity=0.577  Sum_probs=60.0

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCc-chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQ-VAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~-~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++++|+.+|.+++|+|+.+||..++..+|.. ++++++..+|+.+|.|+||.|+++||.++|.+
T Consensus         4 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           4 ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             HHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            8999999999999999999999999999875 79999999999999999999999999999864

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.13  E-value=8.8e-11  Score=101.50  Aligned_cols=93  Identities=20%  Similarity=0.359  Sum_probs=75.7

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCC--CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSV--EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELF  198 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~--~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F  198 (547)
                      +..+|..+|.+++|.| +.++...+..  ..........++.+|+.+|.+++|.|+.+||..++..++    .+.+.++|
T Consensus        38 ~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~el~~~~~~~~----~~~~~~~~  113 (134)
T d1jfja_          38 LQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQV  113 (134)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTT----CHHHHHHH
T ss_pred             HHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccCCcccHHHHHHHHHhcC----cHHHHHHH
Confidence            8889999999999999 5555443321  123334445588999999999999999999999997654    45788899


Q ss_pred             HHhcCCCCCCcCHHHHHHHH
Q 008959          199 KAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       199 ~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      +.+|.|+||.||++||.++|
T Consensus       114 ~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_         114 MKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHCCCCCCCCCHHHHHHHh
Confidence            99999999999999999987

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.12  E-value=3.8e-11  Score=90.65  Aligned_cols=59  Identities=14%  Similarity=0.405  Sum_probs=57.5

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAA  216 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~  216 (547)
                      ++++|+.+|.+++|+|+.+||..+|..+|..++++++..+|+.+|.|++|.|+++||++
T Consensus         3 l~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           3 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             HHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            89999999999999999999999999999999999999999999999999999999974

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.12  E-value=1.6e-10  Score=106.30  Aligned_cols=110  Identities=24%  Similarity=0.276  Sum_probs=71.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++++|+.+|.|++|.|    +..++..++. ..+..+   ++.+++.+|.|++|.|+++||...+..      ..++.+.
T Consensus        20 l~~~F~~~D~d~dG~Is~~El~~~l~~l~~-~~s~~~---~~~l~~~~d~d~~~~i~~~ef~~~~~~------~~~~~~~   89 (182)
T d1y1xa_          20 LMEWFRAVDTDGSGAISVPELNAALSSAGV-PFSLAT---TEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREG   89 (182)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHCBTTB-CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHHcCCCcCCCCHHHHHHHHHHhcc-cCchhh---hhhhhcccccccccccccccccccccc------ccccccc
Confidence            7788888888888887    5555555544 455555   667777777777777777777766542      2356667


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccC
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVN  245 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~  245 (547)
                      |+.+|.+++|.|+.+||.+++..++....+    ..+..+++..|.++
T Consensus        90 F~~~D~~~~g~I~~~el~~~l~~~g~~ls~----~e~~~i~~~~d~~~  133 (182)
T d1y1xa_          90 FRKRDSSGDGRLDSNEVRAALLSSGYQVSE----QTFQALMRKFDRQR  133 (182)
T ss_dssp             HHHHCTTSSSCBCHHHHHHHHHTTSCCCCH----HHHHHHHHHHCTTC
T ss_pred             hhccccccchhhhhHHHHHHHHHhCCchhH----HHHHHHHhhcccCC
Confidence            777777777777777777777666554433    34555555555433

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=7.4e-11  Score=108.63  Aligned_cols=98  Identities=15%  Similarity=0.375  Sum_probs=75.5

Q ss_pred             HHHHHHhhCCC-CCchh-HHHHhhhcCC---CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc-----CCcchH
Q 008959          122 DSEVFDLLDPS-SSNKI-VGKISLSCSV---EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF-----GNQVAA  191 (547)
Q Consensus       122 l~~~F~~~D~d-~dG~I-l~~ll~~l~~---~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l-----g~~~~~  191 (547)
                      ..++|+.+|.+ ++|.| +.+++..+..   ....++.   ++.+|+.+|.|++|.|+.+|+..++..+     +..+++
T Consensus        59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~k---l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~  135 (180)
T d1xo5a_          59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIK---SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSA  135 (180)
T ss_dssp             HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCC
T ss_pred             HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHH---HHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccH
Confidence            57799999987 68999 7776654421   1122333   8999999999999999999999999875     233444


Q ss_pred             HH----HHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          192 NK----KEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       192 ee----l~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ++    +..+|+.+|.|+||.||++||.+++...+
T Consensus       136 ~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~~P  170 (180)
T d1xo5a_         136 SEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP  170 (180)
T ss_dssp             TTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCH
Confidence            33    56689999999999999999999997654

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.07  E-value=1.5e-10  Score=106.35  Aligned_cols=66  Identities=18%  Similarity=0.289  Sum_probs=57.2

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+|+.+|.|++|.|+.+||..++..+|..+++++++.+|+.+|.|+||.|+++||.+++...
T Consensus       107 ~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~~  172 (189)
T d1qv0a_         107 EWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF  172 (189)
T ss_dssp             HHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            346678999999999999999999999999999999999999999999999999999999988663

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.07  E-value=2.3e-10  Score=104.77  Aligned_cols=66  Identities=24%  Similarity=0.384  Sum_probs=61.6

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..++.+|+.+|.|++|.|+.+||..++..+|..++++++..+|+.+|.|+||.|+++||.+++...
T Consensus       105 ~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~~  170 (187)
T d1uhka1         105 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF  170 (187)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHh
Confidence            447889999999999999999999999999999999999999999999999999999999988663

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.07  E-value=2.8e-10  Score=104.64  Aligned_cols=111  Identities=19%  Similarity=0.206  Sum_probs=91.1

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQD  170 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~d  170 (547)
                      ..+.++.+.++..|.            +.++..++..+|.|++|.| +.++...+..       ...+..+|+.+|.+++
T Consensus        26 ~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~-------~~~~~~~F~~~D~~~~   98 (182)
T d1y1xa_          26 AVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGD   98 (182)
T ss_dssp             HHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSS
T ss_pred             HHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccccc-------ccccccchhccccccc
Confidence            444556666665443            3338889999999999999 6666554321       2238889999999999


Q ss_pred             CcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          171 GQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       171 G~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      |.|+.+||..++..+|..+++++++.+|+.+|.|+||.|+++||.+++..+
T Consensus        99 g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l  149 (182)
T d1y1xa_          99 GRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV  149 (182)
T ss_dssp             SCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998654

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.7e-10  Score=104.19  Aligned_cols=62  Identities=31%  Similarity=0.494  Sum_probs=30.3

Q ss_pred             HHHHHhhcCCCCCcccHHHHHHHHHhcCC-cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          159 RRILSIVDYNQDGQLSFKEFSDLISAFGN-QVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       159 ~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ..+|+.+|.+++|.|+++||..++..... ....+.++.+|+.+|.|++|.|+.+|+.+++..
T Consensus        51 ~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~  113 (165)
T d1auib_          51 QRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKM  113 (165)
T ss_dssp             HHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHH
Confidence            34455555555555555555555544322 223334555555555555555555555555444

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.05  E-value=1.1e-10  Score=107.56  Aligned_cols=122  Identities=17%  Similarity=0.246  Sum_probs=97.5

Q ss_pred             cccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcc
Q 008959          115 VFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV  189 (547)
Q Consensus       115 l~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~  189 (547)
                      |++.+.. ++++|+.+|.|++|.|    +..++..++. .++..+   ++.+|+.+|.+++|.|+++||..++.......
T Consensus         4 Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~-~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   79 (182)
T d1s6ia_           4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS-ELMESE---IKDLMDAADIDKSGTIDYGEFIAATVHLNKLE   79 (182)
T ss_dssp             SSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTC-CCCHHH---HHHHHHHTCTTCSSEECHHHHHHHHTTSSSSC
T ss_pred             CCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCC-cccccc---chhhhhhhhccccccchHHHHHHHHHhhcccc
Confidence            3444444 9999999999999999    6666776654 566666   89999999999999999999999887755555


Q ss_pred             hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          190 AANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       190 ~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      ..+++..+|+.+|.+++|+|+.+||.+++...+.  ++    ..+..+++..|.+++
T Consensus        80 ~~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl--~~----~ev~~~f~~~D~d~D  130 (182)
T d1s6ia_          80 REENLVSAFSYFDKDGSGYITLDEIQQACKDFGL--DD----IHIDDMIKEIDQDND  130 (182)
T ss_dssp             CCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC--CT----THHHHHHHHHCSSSS
T ss_pred             cHHHHHHHHHHHhhcCCCccchhhhhhhhhhcCc--cH----HHHHHHHHHhhcCCC
Confidence            6678999999999999999999999999977652  22    246777777776555

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.05  E-value=2.5e-10  Score=100.61  Aligned_cols=117  Identities=12%  Similarity=0.179  Sum_probs=84.8

Q ss_pred             HHHhcCCCcccceecccC------------hHHHHHHHHhhCCC--CCchh-HHHHhhhc---CCCCCChHHHHHHHHHH
Q 008959          101 LLLETNGPHVARISVFED------------SDADSEVFDLLDPS--SSNKI-VGKISLSC---SVEDPIETEKSFARRIL  162 (547)
Q Consensus       101 ll~e~~~~~~~~isl~e~------------~~el~~~F~~~D~d--~dG~I-l~~ll~~l---~~~~~~~~e~~~l~~~f  162 (547)
                      ++.....++.|.++..|.            ..++..++..+|.+  ++|.| +.++...+   ..... ......+..+|
T Consensus         9 ~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~-~~~~~~l~~aF   87 (145)
T d2mysc_           9 AFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKD-QGTFEDFVEGL   87 (145)
T ss_pred             HHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccc-cchHHHHHHHH
Confidence            333445666677766544            22366677766655  57777 44443322   11111 11223389999


Q ss_pred             HhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          163 SIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       163 ~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +.+|.|++|.|+.+||..++..+|..++.++++.+++. |.|+||.|+|+||.+.|.
T Consensus        88 ~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll  143 (145)
T d2mysc_          88 RVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM  143 (145)
T ss_pred             HHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHh
Confidence            99999999999999999999999999999999999975 889999999999998774

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.05  E-value=2e-10  Score=106.27  Aligned_cols=96  Identities=21%  Similarity=0.391  Sum_probs=77.0

Q ss_pred             HHHHHHhhCCCCCchh-HHHHh---hhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC----------
Q 008959          122 DSEVFDLLDPSSSNKI-VGKIS---LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN----------  187 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll---~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~----------  187 (547)
                      ...+|+.+|.+++|.| +.+++   ..+.. .+.++.   ++.+|+.+|.|++|.|+.+||..++..+..          
T Consensus        65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~-~~~~e~---~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~  140 (190)
T d1fpwa_          65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSR-GTLEEK---LSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNE  140 (190)
T ss_dssp             HHHHHHTCCSSCSSEECHHHHHHHHHHHSC-CCSTHH---HHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSC
T ss_pred             HHHHHHHhCcCCCCcccHHHHHHHHHHHcc-CchHHH---HHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCc
Confidence            6789999999999999 55543   33332 344555   899999999999999999999999976421          


Q ss_pred             --cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          188 --QVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       188 --~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                        ...++.++++|+.+|.|+||.||++||.+++...
T Consensus       141 ~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~  176 (190)
T d1fpwa_         141 DEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVD  176 (190)
T ss_dssp             CCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSS
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence              1234678999999999999999999999998663

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.04  E-value=5.7e-11  Score=96.35  Aligned_cols=68  Identities=22%  Similarity=0.428  Sum_probs=61.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      ++++...++++|..+|.|++|.|+.+||..+|..+|..+++++++++|+.+|.|++|.|+++||.++|
T Consensus        18 ~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          18 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            33333348899999999999999999999999999999999999999999999999999999998754

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.04  E-value=1.3e-10  Score=105.94  Aligned_cols=64  Identities=13%  Similarity=0.238  Sum_probs=45.5

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+|+.+|.|++|.|+.+||..++..+|  ++.++++.+|+.+|.|+||.|+++||.+++.+.
T Consensus       105 ~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--l~~~~~~~~f~~~D~d~dG~i~~~EF~~~~~~f  168 (185)
T d2sasa_         105 NRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCccCCHHHHHHHHHHcC--CCHHHHHHHHHHcCCCCCCCCcHHHHHHHHHHH
Confidence            3466777777777777777777777776655  556677777777777777777777777776553

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=6.1e-10  Score=102.27  Aligned_cols=126  Identities=13%  Similarity=0.181  Sum_probs=100.8

Q ss_pred             CCCCCCchhhHHHHHhcCCCcccceecccC------------hHH-HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHH
Q 008959           89 NTDKPIWNSEKKLLLETNGPHVARISVFED------------SDA-DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETE  154 (547)
Q Consensus        89 ~tLnP~Wne~~kll~e~~~~~~~~isl~e~------------~~e-l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e  154 (547)
                      ..+-|.-++...++...+.++.+.++..|+            ..+ ++.+++.+|.|++|.| +.+++..+..    .  
T Consensus        12 ~~~~~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~----~--   85 (181)
T d1hqva_          12 GAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY----I--   85 (181)
T ss_dssp             -CCCSCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHH----H--
T ss_pred             CCCCccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhh----c--
Confidence            345566666666666677777777765433            333 8899999999999999 6666543321    1  


Q ss_pred             HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                       ..++.+|+.+|.+++|.|+.+||..++...+..++++++.++++.+|.+++|.|+++||++++..+
T Consensus        86 -~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l  151 (181)
T d1hqva_          86 -TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL  151 (181)
T ss_dssp             -HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             -cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence             237899999999999999999999999999999999999999999999999999999999988553

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.02  E-value=5.5e-10  Score=103.06  Aligned_cols=98  Identities=18%  Similarity=0.317  Sum_probs=72.7

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCC--CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC------------
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSV--EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG------------  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~--~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg------------  186 (547)
                      +..+|+.+|.|++|.| +.+++..+..  ..+.++.   ++.+|+.+|.|++|.|+..||..++..+.            
T Consensus        60 ~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~---~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~  136 (189)
T d1jbaa_          60 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK---LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEA  136 (189)
T ss_dssp             HHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHH---HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTS
T ss_pred             HHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHH---HHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchh
Confidence            7889999999999998 5554333221  1233444   78899999999999999999988876431            


Q ss_pred             -----CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          187 -----NQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       187 -----~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                           ...+++.++.+|+.+|.|+||.||++||.+++...+
T Consensus       137 ~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p  177 (189)
T d1jbaa_         137 EQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDK  177 (189)
T ss_dssp             STTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTT
T ss_pred             hhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence                 012345678899999999999999999999886543

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.5e-10  Score=106.77  Aligned_cols=97  Identities=21%  Similarity=0.386  Sum_probs=75.3

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCC--CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC------------
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSV--EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG------------  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~--~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg------------  186 (547)
                      ...+|+.+|.+++|.| +.+++..+..  .....+   .++.+|+.+|.|++|.|+.+|+..++..+.            
T Consensus        62 ~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e---~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~  138 (187)
T d1g8ia_          62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDE---KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEE  138 (187)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHH---HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGG
T ss_pred             HHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhh---hHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchh
Confidence            5779999999999999 6555433321  112222   388999999999999999999999886531            


Q ss_pred             CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          187 NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       187 ~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ....++.++.+|+.+|.|+||.||++||.+++...
T Consensus       139 ~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~  173 (187)
T d1g8ia_         139 ENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD  173 (187)
T ss_dssp             GSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHC
T ss_pred             hccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHC
Confidence            12345678899999999999999999999998764

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=8.1e-10  Score=100.21  Aligned_cols=90  Identities=16%  Similarity=0.220  Sum_probs=64.2

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      .+.++..+|.|++|.| +.++...+.       ....|+.+|+.+|.|++|+|+.+||..++..+|..++.+++..+++.
T Consensus        42 ~~~li~~~D~~~~G~i~~~EF~~l~~-------~~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~  114 (165)
T d1k94a_          42 CRIMIAMLDRDHTGKMGFNAFKELWA-------ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR  114 (165)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHH-------HHHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHhh-------ccchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence            5667777788888877 555544321       12237778888888888888888888888777777777778888877


Q ss_pred             hcCCCCCCcCHHHHHHHHHh
Q 008959          201 ADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +|.  +|.|+++||.+++..
T Consensus       115 ~d~--~g~i~~~eFi~~~~~  132 (165)
T d1k94a_         115 YSK--NGRIFFDDYVACCVK  132 (165)
T ss_dssp             HCB--TTBCBHHHHHHHHHH
T ss_pred             cCC--CCcCcHHHHHHHHHH
Confidence            764  467888888777754

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.00  E-value=3.8e-10  Score=103.63  Aligned_cols=102  Identities=21%  Similarity=0.310  Sum_probs=74.4

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----CCcchHH----
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----GNQVAAN----  192 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g~~~~~e----  192 (547)
                      ...+|+.+|.|++|.| +.+++..+............++.+|+.+|.|++|.|+.+|+..++...    +...+++    
T Consensus        56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~  135 (183)
T d2zfda1          56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED  135 (183)
T ss_dssp             HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence            6789999999999999 666654432111111111238889999999999999999999987642    4444433    


Q ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          193 KKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       193 el~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      .+..+|+.+|.|+||.|+++||.+++...+.
T Consensus       136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~  166 (183)
T d2zfda1         136 IIDKTFEEADTKHDGKIDKEEWRSLVLRHPS  166 (183)
T ss_dssp             HHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred             HHHHHHHHhCCCCCCeEcHHHHHHHHHHCHH
Confidence            3667899999999999999999999877554

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.99  E-value=3.4e-10  Score=103.54  Aligned_cols=100  Identities=20%  Similarity=0.320  Sum_probs=75.3

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC------------Cc
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFG------------NQ  188 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg------------~~  188 (547)
                      ..++|+.+|.+++|.| +.+++..+....... ....++.+|+.+|.|++|.|+.+||..++..+.            ..
T Consensus        61 ~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~-~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~  139 (181)
T d1bjfa_          61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGK-LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES  139 (181)
T ss_dssp             HHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC-HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGS
T ss_pred             HHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhc-hHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccc
Confidence            6789999999999998 555544332211111 112388899999999999999999999987631            23


Q ss_pred             chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          189 VAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       189 ~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ..++.++.+|+.+|.|+||.||++||.+++...+
T Consensus       140 ~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p  173 (181)
T d1bjfa_         140 TPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDP  173 (181)
T ss_dssp             SHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCT
T ss_pred             cHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence            4556788999999999999999999999887654

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=7.9e-10  Score=100.28  Aligned_cols=81  Identities=21%  Similarity=0.361  Sum_probs=63.3

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGET  237 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~  237 (547)
                      ++.++..+|.|++|.|+++||..++..      ..+++.+|+.+|+|++|+|+.+||++++...|...+.    ..+..+
T Consensus        42 ~~~li~~~D~~~~G~i~~~EF~~l~~~------~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~----~~~~~l  111 (165)
T d1k94a_          42 CRIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSP----QTLTTI  111 (165)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCH----HHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHhhc------cchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCH----HHHHHH
Confidence            778888888888888888888888754      3578888888888888888888888888888876554    457777


Q ss_pred             HhhhcccCccc
Q 008959          238 LEVADMVNTMI  248 (547)
Q Consensus       238 l~~~D~~~~l~  248 (547)
                      +...|..+.+.
T Consensus       112 ~~~~d~~g~i~  122 (165)
T d1k94a_         112 VKRYSKNGRIF  122 (165)
T ss_dssp             HHHHCBTTBCB
T ss_pred             HHHcCCCCcCc
Confidence            76667666553

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.97  E-value=1e-09  Score=98.75  Aligned_cols=63  Identities=32%  Similarity=0.570  Sum_probs=44.6

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ..++.+|..+|.|++|.|+.+||..++..++  +++++++.+|+.+|.|+||.|+++||.++++.
T Consensus       102 ~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~  164 (176)
T d1nyaa_         102 PVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAVRD  164 (176)
T ss_dssp             HHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred             HHHHHHHHHHccCCChhhhHHHHHHHHHhcC--CcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            3456677777777777777777777776665  56667777777777777777777777777654

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.4e-09  Score=97.99  Aligned_cols=70  Identities=20%  Similarity=0.219  Sum_probs=50.4

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ..++++...++++|+.+|.|++|.|+++||..++.....    ..+.++|+.+|.+++|.|+++||..++....
T Consensus         9 ~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~----~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~   78 (165)
T d1auib_           9 HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQN----PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFS   78 (165)
T ss_dssp             SCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTC----TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCC----HHHHHHHHHHccccchhhhhhhhhhhccccc
Confidence            355666667888888888888888888888776544222    2356678888888888888888888776653

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.94  E-value=6.6e-10  Score=102.44  Aligned_cols=108  Identities=15%  Similarity=0.196  Sum_probs=85.4

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      ...++..+|.|++|.| +.++......       ...++.+|+.+|.|++|+|+.+||..++..+|..++.+. .+++..
T Consensus        63 ~~~l~~~~D~d~~G~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~-~~~~~~  134 (186)
T d1df0a1          63 CKIMVDMLDEDGSGKLGLKEFYILWTK-------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQL-HQVIVA  134 (186)
T ss_dssp             HHHHHHHHCCSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHH-HHHHHH
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHh-------HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHH-HHHHHH
Confidence            6778999999999999 6666543321       223899999999999999999999999999998888765 466777


Q ss_pred             hcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCcc
Q 008959          201 ADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l  247 (547)
                      +|.|++|.|+++||.+++..+.          .+.++.+..|..++.
T Consensus       135 ~d~d~dg~I~f~eFi~~~~~l~----------~~~~~F~~~D~~~~G  171 (186)
T d1df0a1         135 RFADDELIIDFDNFVRCLVRLE----------ILFKIFKQLDPENTG  171 (186)
T ss_dssp             HHCCSTTEECHHHHHHHHHHHH----------HHHHHHHHHCTTCCS
T ss_pred             HHcCCCCeEeHHHHHHHHHHHH----------HHHHHHHHhCCCCCC
Confidence            9999999999999999886642          245556666665554

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.94  E-value=5.9e-10  Score=87.73  Aligned_cols=64  Identities=22%  Similarity=0.401  Sum_probs=56.9

Q ss_pred             HHHHHHhhcCC--CCCcccHHHHHHHHHhcCCcch--HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          158 ARRILSIVDYN--QDGQLSFKEFSDLISAFGNQVA--ANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       158 l~~~f~~~D~d--~dG~Is~~Ef~~~l~~lg~~~~--~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++.+|+.||.+  ++|+|+.+||..++..+|..++  +.++.++|+.+|.|+||.|+|+||..+|..+
T Consensus         7 l~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           7 IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            99999999765  4699999999999999887654  4579999999999999999999999999764

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.93  E-value=1.5e-09  Score=100.57  Aligned_cols=92  Identities=14%  Similarity=0.198  Sum_probs=72.9

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      .+.++..+|.|++|.| +.++...+.       ....|+.+|+.+|.|++|.|+..||..++..+|..++.+.+..++..
T Consensus        65 ~~~li~~~D~d~~G~i~~~EF~~l~~-------~~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~  137 (188)
T d1qxpa2          65 CRSMVNLMDRDGNGKLGLVEFNILWN-------RIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR  137 (188)
T ss_dssp             HHHHHHHHCC--CCCCCSSSHHHHHH-------HHHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCcccHHHHHHHHh-------hhHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence            6788999999999999 444333221       11238999999999999999999999999999988888777777766


Q ss_pred             hcCCCCCCcCHHHHHHHHHhh
Q 008959          201 ADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                       |.|++|.|+++||..++..+
T Consensus       138 -~~~~dg~i~f~eFi~~~~~l  157 (188)
T d1qxpa2         138 -FADDELIIDFDNFVRCLVRL  157 (188)
T ss_dssp             -TSCSSSBCCHHHHHHHHHHH
T ss_pred             -hcCCCCcCCHHHHHHHHHHH
Confidence             56999999999999988654

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.90  E-value=2.8e-09  Score=98.42  Aligned_cols=123  Identities=17%  Similarity=0.151  Sum_probs=87.1

Q ss_pred             HHHHHHhh-CCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLL-DPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +..++..| +.+++|.+    +..++..+.........   ++.+|+.+|.+++|.|++.||..++..+.....+++++.
T Consensus        27 i~~l~~~F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~---~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~  103 (190)
T d1fpwa_          27 IQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDF---ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSW  103 (190)
T ss_dssp             HHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHH---HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHH
T ss_pred             HHHHHHHHHHHCCCCCccHHHHHHHHHHHCCCCChHHH---HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHH
Confidence            44444443 34557777    55555555432222222   688999999999999999999999998887788899999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCc--------ccccchhHHHHHhhhcccCcc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEP--------LMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~--------~~~~~~~~~~~l~~~D~~~~l  247 (547)
                      +|+.+|.|++|.|+++|+..++........        +......+.+++.+.|.+++.
T Consensus       104 ~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG  162 (190)
T d1fpwa_         104 AFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDG  162 (190)
T ss_dssp             HHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSS
T ss_pred             HHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999988653211        111112355666666665543

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.2e-09  Score=97.46  Aligned_cols=61  Identities=26%  Similarity=0.420  Sum_probs=32.6

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhcc
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEK  224 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~  224 (547)
                      ++.++..+|.|++|.|+++||..++..      ...+..+|+.+|.|++|.|+.+|+..++..++..
T Consensus        49 v~~l~~~~D~d~~G~I~f~EF~~~~~~------~~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~  109 (172)
T d1juoa_          49 CRLMVSMLDRDMSGTMGFNEFKELWAV------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFR  109 (172)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHH------HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHCCCCCCceehHHHHHHHHh------hhhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHh
Confidence            455555555555555555555555432      2234455555555555555555555555555443

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.90  E-value=1.5e-09  Score=100.95  Aligned_cols=97  Identities=14%  Similarity=0.232  Sum_probs=69.2

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcC--CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCc----------
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCS--VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQ----------  188 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~--~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~----------  188 (547)
                      ...+|+.+|.|++|.| +.+++..+.  .....++.   ++.+|+.+|.|++|.|+.+||..++..+...          
T Consensus        65 ~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~~~~---l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~  141 (201)
T d1omra_          65 AQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQK---LEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLP  141 (201)
T ss_dssp             HHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCGGGS---HHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSC
T ss_pred             HHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHH---HHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhh
Confidence            5778889999999988 555443221  11233344   7888999999999999999988888764221          


Q ss_pred             ----chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          189 ----VAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       189 ----~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                          ...+.++.+|+.+|.|+||.||++||.+.+...
T Consensus       142 ~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~  178 (201)
T d1omra_         142 EDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN  178 (201)
T ss_dssp             GGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHC
T ss_pred             hhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHC
Confidence                123356788899999999999999998877653

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=1e-09  Score=87.74  Aligned_cols=62  Identities=11%  Similarity=0.155  Sum_probs=59.6

Q ss_pred             HHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          157 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       157 ~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      .+.++|+.+|.+++|.|+.+||..+|..++..+++++++.+|..+|.|++|.|+|.||.+.+
T Consensus        21 ~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          21 AITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            38899999999999999999999999999999999999999999999999999999999875

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.86  E-value=3.1e-09  Score=98.77  Aligned_cols=99  Identities=22%  Similarity=0.296  Sum_probs=78.0

Q ss_pred             HHHHHHhh-CCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLL-DPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +..+++.| +.+++|.|    |..++..+........   .++.+|+.+|.|++|.|++.||..++..+.....++.++.
T Consensus        27 i~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~---~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~~~~l~~  103 (201)
T d1omra_          27 LSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKA---YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEW  103 (201)
T ss_dssp             HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHH---HHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCGGGSHHH
T ss_pred             HHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHH---HHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHH
Confidence            45445443 55678998    5566666554222222   3788999999999999999999999988766677888999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      +|+.+|.|++|.|+.+||..++.....
T Consensus       104 ~F~~~D~d~~G~is~~E~~~~~~~~~~  130 (201)
T d1omra_         104 AFSLYDVDGNGTISKNEVLEIVTAIFK  130 (201)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHHHT
T ss_pred             HHHHHccCCCCccCHHHHHHHHHHHHh
Confidence            999999999999999999999987644

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=1.5e-09  Score=89.20  Aligned_cols=68  Identities=22%  Similarity=0.260  Sum_probs=61.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +.+++..++++|+.+|.|++|.|+.+|+..++...+  ++.+++.++|+.+|.|+||+|+++||..+|+-
T Consensus         5 t~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~L   72 (95)
T d1c07a_           5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             CSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            455666689999999999999999999999998876  78889999999999999999999999987743

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=3.5e-09  Score=96.14  Aligned_cols=107  Identities=13%  Similarity=0.179  Sum_probs=86.4

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      ++.++..+|.|++|.| +.++...+..    ..   .+..+|+.+|.+++|.|+.+|+..++..++..++.+++..+|+.
T Consensus        49 v~~l~~~~D~d~~G~I~f~EF~~~~~~----~~---~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~  121 (172)
T d1juoa_          49 CRLMVSMLDRDMSGTMGFNEFKELWAV----LN---GWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR  121 (172)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHH----HH---HHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCceehHHHHHHHHh----hh---hhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            6889999999999999 6666543321    22   27889999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCcc
Q 008959          201 ADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l  247 (547)
                      +|.  +|.|+++||.+++..+.          ...++++..|.+++.
T Consensus       122 ~d~--~g~i~~~eF~~~~~~~~----------~~~~~f~~~D~d~~G  156 (172)
T d1juoa_         122 YST--NGKITFDDYIACCVKLR----------ALTDSFRRRDTAQQG  156 (172)
T ss_dssp             TCS--SSSEEHHHHHHHHHHHH----------HHHHHHHHTCTTCCS
T ss_pred             HHh--cCCcCHHHHHHHHHHHH----------HHHHHHHHhCCCCCC
Confidence            964  57899999999997642          244556666655443

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.86  E-value=3.7e-10  Score=103.82  Aligned_cols=114  Identities=18%  Similarity=0.274  Sum_probs=89.1

Q ss_pred             hcCCCcccceecccC------------hHHHHHHHHhhCCCCCchh-HHHHhhhcCC--CCCChHHHHHHHHHHHhhcCC
Q 008959          104 ETNGPHVARISVFED------------SDADSEVFDLLDPSSSNKI-VGKISLSCSV--EDPIETEKSFARRILSIVDYN  168 (547)
Q Consensus       104 e~~~~~~~~isl~e~------------~~el~~~F~~~D~d~dG~I-l~~ll~~l~~--~~~~~~e~~~l~~~f~~~D~d  168 (547)
                      ..+.++.+.++..+.            +.++..+|..+|.+++|.| +.+++.....  .....+.   ++.+|+.+|.+
T Consensus        18 ~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~---l~~aF~~~D~d   94 (182)
T d1s6ia_          18 MIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREEN---LVSAFSYFDKD   94 (182)
T ss_dssp             TTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCS---THHHHHHTTTT
T ss_pred             HHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccHHH---HHHHHHHHhhc
Confidence            344556666665443            3338899999999999999 5554432221  1222333   78899999999


Q ss_pred             CCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          169 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       169 ~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ++|.|+..||..++..++  +++++++.+|+.+|.|+||.|+++||+++|....
T Consensus        95 ~~G~i~~~el~~~l~~~g--l~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~  146 (182)
T d1s6ia_          95 GSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK  146 (182)
T ss_dssp             CSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred             CCCccchhhhhhhhhhcC--ccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCc
Confidence            999999999999998877  7889999999999999999999999999997654

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.85  E-value=5e-09  Score=92.11  Aligned_cols=75  Identities=17%  Similarity=0.346  Sum_probs=64.0

Q ss_pred             CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          149 DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       149 ~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      +.++++...++.+|+.+|.|++|.|+++||..++...|...++..+..++..++.++++.+++++|...+.....
T Consensus         3 ~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (146)
T d1lkja_           3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK   77 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhc
Confidence            456777777889999999999999999999999988888888888888999999999999999999888866543

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.83  E-value=5e-09  Score=91.98  Aligned_cols=88  Identities=10%  Similarity=0.189  Sum_probs=66.9

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCccccc
Q 008959          151 IETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNC  230 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~  230 (547)
                      ++++...++++|..+|.|++|.|+..||..++..+|..++.+++..+++    +++|.|+++||..++..........  
T Consensus         2 ~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~--   75 (142)
T d1wdcb_           2 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSE--   75 (142)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCH--
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchh--
Confidence            4566667999999999999999999999999999999999988888774    6789999999999887643322111  


Q ss_pred             chhHHHHHhhhcccC
Q 008959          231 CPVCGETLEVADMVN  245 (547)
Q Consensus       231 ~~~~~~~l~~~D~~~  245 (547)
                       ..+.++++..|..+
T Consensus        76 -~~l~~aF~~~D~d~   89 (142)
T d1wdcb_          76 -ETIRNAFAMFDEQE   89 (142)
T ss_dssp             -HHHHHHHHTTCTTC
T ss_pred             -hhHHHhhhhhcccC
Confidence             23555665555443

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=98.83  E-value=1.5e-09  Score=100.52  Aligned_cols=96  Identities=19%  Similarity=0.238  Sum_probs=69.9

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCC-------CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcch
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVE-------DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~-------~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~  190 (547)
                      ++++|+.+| +++|.|    +..++..++..       ..+.+.   ++.++..+|.|++|.|+++||..++..+     
T Consensus        22 ~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~---~~~li~~~D~d~~G~i~~~EF~~l~~~~-----   92 (188)
T d1qxpa2          22 FKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLES---CRSMVNLMDRDGNGKLGLVEFNILWNRI-----   92 (188)
T ss_dssp             -----CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHH---HHHHHHHHCC--CCCCCSSSHHHHHHHH-----
T ss_pred             HHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHH---HHHHHHHhcCCCCCcccHHHHHHHHhhh-----
Confidence            788999999 458998    55555443321       122333   8999999999999999999999998643     


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPL  227 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~  227 (547)
                       ..++.+|+.+|+|++|.|+.+||..+|..+|...++
T Consensus        93 -~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~  128 (188)
T d1qxpa2          93 -RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC  128 (188)
T ss_dssp             -HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCH
T ss_pred             -HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCH
Confidence             578999999999999999999999999998876553

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.83  E-value=5.9e-09  Score=94.01  Aligned_cols=67  Identities=22%  Similarity=0.290  Sum_probs=59.5

Q ss_pred             HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      ...+..+|+.+|.|++|.|+.+||..++..++  ++.+++..+|+.+|.|+||.|+++||++++.....
T Consensus        93 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~--~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f~~  159 (174)
T d2scpa_          93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFM  159 (174)
T ss_dssp             HTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCGGGHHHHHHHHCTTCSSEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCccccCCHHHHHHHHHHHh--hhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHHHhh
Confidence            34577899999999999999999999998877  56778999999999999999999999999877543

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.82  E-value=6.3e-09  Score=95.70  Aligned_cols=96  Identities=16%  Similarity=0.183  Sum_probs=79.1

Q ss_pred             HHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      ++++|..|+.+ .+|.|    |..++...+. ......   ++.+|+.+|.|++|.|++.||..++..+.....++.++.
T Consensus        23 i~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~-~~~~~~---~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~   98 (189)
T d1jbaa_          23 LQEWYKKFLEECPSGTLFMHEFKRFFKVPDN-EEATQY---VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW   98 (189)
T ss_dssp             HHHHHHHHHSSSTTCCEEHHHHHHHHHCCSS-STTHHH---HHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHH
T ss_pred             HHHHHHHhcccCCCCeeeHHHHHHHHHHcCC-CccHHH---HHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHH
Confidence            78888887655 58998    5555544433 333444   899999999999999999999999998777777889999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +|+.+|.|++|.|+.+|+..++...
T Consensus        99 ~F~~~D~d~~g~i~~~E~~~~~~~~  123 (189)
T d1jbaa_          99 TFKIYDKDRNGCIDRQELLDIVESI  123 (189)
T ss_dssp             HHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             HHhhhccCCCCcccHhHHHHHHHHH
Confidence            9999999999999999999988764

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=4.7e-09  Score=85.59  Aligned_cols=69  Identities=12%  Similarity=0.258  Sum_probs=62.2

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .++++...++.+|+.+|.|++|.|+.+|+..++...+  ++.+++.++++.+|.|+||+|+++||..+|+-
T Consensus         3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l   71 (92)
T d1fi6a_           3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence            4567777899999999999999999999999999876  78899999999999999999999999876643

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=98.81  E-value=5.1e-09  Score=96.29  Aligned_cols=98  Identities=19%  Similarity=0.269  Sum_probs=80.4

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCC-------CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCc
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVE-------DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQ  188 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~-------~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~  188 (547)
                      +.++++|..+| |+||.|    +..++..++..       ..+.+.   +..++..+|.|++|.|+++||..++..    
T Consensus        18 ~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~---~~~l~~~~D~d~~G~I~~~EF~~~~~~----   89 (186)
T d1df0a1          18 DGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIET---CKIMVDMLDEDGSGKLGLKEFYILWTK----   89 (186)
T ss_dssp             HHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHH---HHHHHHHHCCSSSSEECHHHHHHHHHH----
T ss_pred             HHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHH---HHHHHHHHcCCCCCcccHHHHHHHHHh----
Confidence            34899999998 899999    55566554321       223444   899999999999999999999999854    


Q ss_pred             chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcc
Q 008959          189 VAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPL  227 (547)
Q Consensus       189 ~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~  227 (547)
                        ...+..+|+.+|+|++|+|+.+||.++|...+...+.
T Consensus        90 --~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~  126 (186)
T d1df0a1          90 --IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC  126 (186)
T ss_dssp             --HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCH
T ss_pred             --HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccH
Confidence              3578999999999999999999999999998877654

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.80  E-value=1.1e-08  Score=93.41  Aligned_cols=95  Identities=20%  Similarity=0.323  Sum_probs=75.8

Q ss_pred             HHHHHHhhCCC--CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC-cchHHHH
Q 008959          122 DSEVFDLLDPS--SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGN-QVAANKK  194 (547)
Q Consensus       122 l~~~F~~~D~d--~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~~~eel  194 (547)
                      +.+.|..+|.+  ++|.|    +..++..... .+. .   ..+.+|+.+|.|++|.|++.||..++..+.. ...++.+
T Consensus        19 L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~-~~~-~---~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~   93 (183)
T d2zfda1          19 LYELFKKISSAVIDDGLINKEEFQLALFKTNK-KES-L---FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKI   93 (183)
T ss_dssp             HHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSS-CCC-H---HHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHH
T ss_pred             HHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCC-CCC-H---HHHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHH
Confidence            88889888875  68888    5455544433 222 2   2688999999999999999999999877543 3556789


Q ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          195 EELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       195 ~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +.+|+.+|.|++|.|+.+|+..++...
T Consensus        94 ~~~F~~~D~d~~G~Is~~e~~~~~~~~  120 (183)
T d2zfda1          94 HFSFQLYDLKQQGFIERQEVKQMVVAT  120 (183)
T ss_dssp             HHHHHHHCTTSSSSEEHHHHHHHHHHH
T ss_pred             HHhhcccccCCCCCccHHHHHHHHHHH
Confidence            999999999999999999999988764

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.79  E-value=1.1e-08  Score=93.06  Aligned_cols=99  Identities=17%  Similarity=0.215  Sum_probs=77.0

Q ss_pred             HHHHHHHhh-CCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHH
Q 008959          121 ADSEVFDLL-DPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE  195 (547)
Q Consensus       121 el~~~F~~~-D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~  195 (547)
                      +++.+++.| +.+++|.|    +..++..+.........   ++.+|+.+|.|++|.|+++||..++..+......+.++
T Consensus        14 ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~---~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~~~   90 (178)
T d1s6ca_          14 ELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTY---AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLR   90 (178)
T ss_dssp             HHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHH---HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHH
T ss_pred             HHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHH---HHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHHHH
Confidence            356666655 55678888    55555555442223333   68899999999999999999999997765556788999


Q ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          196 ELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       196 ~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      .+|+.+|.|++|.|+.+|+..++....
T Consensus        91 ~~f~~~D~~~~g~i~~~e~~~~~~~~~  117 (178)
T d1s6ca_          91 WTFNLYDINKDGYINKEEMMDIVKAIY  117 (178)
T ss_dssp             HHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred             HHHHhhccCCCCeecHHHHHHHHHHHH
Confidence            999999999999999999999887653

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.78  E-value=1.2e-08  Score=92.47  Aligned_cols=92  Identities=12%  Similarity=0.182  Sum_probs=64.6

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKA  200 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~  200 (547)
                      .+.++..+|.|++|.| +.++.....       ....+..+|+.+|.|++|.|+..||..+|...|..++++.++.++ .
T Consensus        49 ~~~l~~~~d~d~~g~i~~~ef~~~~~-------~~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~-~  120 (173)
T d1alva_          49 CRSMVAVMDSDTTGKLGFEEFKYLWN-------NIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII-R  120 (173)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHH-------HHHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHH-H
T ss_pred             HHHHHHHhccCCCCcccchhhhhhhh-------hhhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhh-c
Confidence            6777788888888877 555443221       112367788888888888888888888888777777766665444 4


Q ss_pred             hcCCCCCCcCHHHHHHHHHhh
Q 008959          201 ADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       201 ~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +|.|++|.|+++||.+++..+
T Consensus       121 ~d~d~~G~i~~~EF~~~~~~~  141 (173)
T d1alva_         121 RYSDEGGNMDFDNFISCLVRL  141 (173)
T ss_dssp             HHTCSSSCBCHHHHHHHHHHH
T ss_pred             cccCCCCeEeHHHHHHHHHHH
Confidence            555888888888888877665

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.78  E-value=4.7e-09  Score=95.47  Aligned_cols=96  Identities=22%  Similarity=0.436  Sum_probs=72.9

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhhhcCC--CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc----C--------
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISLSCSV--EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF----G--------  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~~l~~--~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l----g--------  186 (547)
                      ...+|+.+|.|++|.| +.+++..+..  .....+.   ++.+|+.+|.|++|.|+.+|+..++..+    +        
T Consensus        53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~---~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~  129 (178)
T d1s6ca_          53 AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK---LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLK  129 (178)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHH---HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC--------
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHH---HHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCc
Confidence            5789999999999999 5555433311  1222333   8899999999999999999999887653    1        


Q ss_pred             CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          187 NQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       187 ~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .....+.++.+|+.+|.|+||.||++||.+++.+
T Consensus       130 ~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~  163 (178)
T d1s6ca_         130 EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE  163 (178)
T ss_dssp             ---CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            1123455788999999999999999999998854

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=9.5e-09  Score=94.30  Aligned_cols=97  Identities=22%  Similarity=0.284  Sum_probs=73.8

Q ss_pred             HHHHHHhh-CCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLL-DPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      +..+|..| +.+++|.+    +..++..+.. ......  ..+.+|..+|.+++|.|++.||..++..+.....++.++.
T Consensus        24 i~~l~~~F~~~~~~g~i~~~ef~~~~~~~~~-~~~~~~--~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e~l~~  100 (187)
T d1g8ia_          24 VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFP-FGDPTK--FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRW  100 (187)
T ss_dssp             HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCT-TSCTHH--HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCcCHHHHHHHHHHhcC-CCCHHH--HHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhhhHHH
Confidence            45555544 33567776    5555555543 222222  2678999999999999999999999988655567788999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +|+.+|.|+||.|+.+|+..++...
T Consensus       101 ~F~~~D~d~dG~i~~~El~~~~~~~  125 (187)
T d1g8ia_         101 AFKLYDLDNDGYITRNEMLDIVDAI  125 (187)
T ss_dssp             HHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCeEcHHHHHHHHHHH
Confidence            9999999999999999999999765

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.77  E-value=2.3e-08  Score=90.96  Aligned_cols=123  Identities=18%  Similarity=0.171  Sum_probs=87.2

Q ss_pred             HHHHHHhh-CCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHH
Q 008959          122 DSEVFDLL-DPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEE  196 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~  196 (547)
                      ++.++..| +.+++|.+    +..++..+........   ..+++|..+|.+++|.|+++||..++..+.....++.++.
T Consensus        23 i~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~---~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~~~~~~~   99 (181)
T d1bjfa_          23 IQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASK---FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW   99 (181)
T ss_dssp             HHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHH---HHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCcCHHHHHHHHHHhCCCCCHHH---HHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhchHHHHHH
Confidence            55555543 34678888    4455544433122222   2688999999999999999999999988777778889999


Q ss_pred             HHHHhcCCCCCCcCHHHHHHHHHhhhccCccc--------ccchhHHHHHhhhcccCcc
Q 008959          197 LFKAADKNGDGVVSVDELAALLALQQEKEPLM--------NCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       197 ~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~--------~~~~~~~~~l~~~D~~~~l  247 (547)
                      +|+.+|.|++|+|+.+||..++..........        ..-..+.+++.+.|.+++.
T Consensus       100 ~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG  158 (181)
T d1bjfa_         100 AFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDG  158 (181)
T ss_dssp             HHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSS
T ss_pred             HHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999998764321110        0002366667777765553

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.77  E-value=1.2e-08  Score=92.59  Aligned_cols=109  Identities=15%  Similarity=0.206  Sum_probs=82.4

Q ss_pred             HHHHHhcCCCcccceecccCh-----HH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCC
Q 008959           99 KKLLLETNGPHVARISVFEDS-----DA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYN  168 (547)
Q Consensus        99 ~kll~e~~~~~~~~isl~e~~-----~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d  168 (547)
                      ..++.....++.+.+++.+..     .. ...+|+.+|.|++|.|    +..++..++. ..+++.    ..+|..+|.|
T Consensus        50 ~~l~~~~d~d~~g~i~~~ef~~~~~~~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~-~~~~~~----~~~~~~~d~d  124 (173)
T d1alva_          50 RSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGF-HLNEHL----YSMIIRRYSD  124 (173)
T ss_dssp             HHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTC-CCCHHH----HHHHHHHHTC
T ss_pred             HHHHHHhccCCCCcccchhhhhhhhhhhHHHHHHHHhccCCCCeecHHHHHHHHHHHHH-hhHHHH----HHHhhccccC
Confidence            344445556667777765541     12 7889999999999999    7777777765 444444    4455567779


Q ss_pred             CCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCc--CHHHHHHHH
Q 008959          169 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV--SVDELAALL  218 (547)
Q Consensus       169 ~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~I--s~~Ef~~~l  218 (547)
                      ++|.|+++||..++..      .+.+..+|+.+|+|++|.|  +++||.++.
T Consensus       125 ~~G~i~~~EF~~~~~~------~~~~~~~f~~~D~d~~G~it~~~~efl~~~  170 (173)
T d1alva_         125 EGGNMDFDNFISCLVR------LDAMFRAFKSLDKDGTGQIQVNIQEWLQLT  170 (173)
T ss_dssp             SSSCBCHHHHHHHHHH------HHHHHHHHHHHSSSCCSEEEEEHHHHHHHH
T ss_pred             CCCeEeHHHHHHHHHH------HHHHHHHHHHhCCCCCCcEEecHHHHHHHH
Confidence            9999999999999854      3578899999999999988  588998764

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=9.2e-09  Score=94.24  Aligned_cols=120  Identities=22%  Similarity=0.311  Sum_probs=82.4

Q ss_pred             HHHHHHhhCCCCCchh---------HHHHhhhcCCCCCChHHHHHHHHHHHhhcCC-CCCcccHHHHHHHHHhcC-Ccch
Q 008959          122 DSEVFDLLDPSSSNKI---------VGKISLSCSVEDPIETEKSFARRILSIVDYN-QDGQLSFKEFSDLISAFG-NQVA  190 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I---------l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d-~dG~Is~~Ef~~~l~~lg-~~~~  190 (547)
                      +.+.|..+|++++|.+         +.+++..     +.........++|+.+|.+ ++|.|+++||..++..+. ....
T Consensus        19 l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~-----~~l~~~~~~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~   93 (180)
T d1xo5a_          19 AHRRFCELLPQEQRSVESSLRAQVPFEQILSL-----PELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATP   93 (180)
T ss_dssp             HHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTS-----HHHHTCTTHHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCH
T ss_pred             HHHHHHHHCcCccccccccccceEcHHHHhcC-----cccccChHHHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCH
Confidence            6778888888888765         2222211     1111112357799999987 699999999999998754 4466


Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhc-----cCcccccchhHHHHHhhhcccCc
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQQE-----KEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~-----~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      +++++.+|+.+|.|++|+|+.+|+.+++..+..     ...+......+..++.+.|.+++
T Consensus        94 ~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~d  154 (180)
T d1xo5a_          94 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRD  154 (180)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCC
Confidence            788999999999999999999999999988632     11111111225556666665544

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=98.72  E-value=1e-08  Score=81.50  Aligned_cols=59  Identities=29%  Similarity=0.504  Sum_probs=52.4

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++++|+.||.|++|.|    +..++..++  .++..+   +..+|+.+|.|++|.|+++||..++...
T Consensus         8 ~~~~F~~~D~d~~G~I~~~El~~~l~~lg--~~~~~e---i~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           8 RERIFKRFDTNGDGKISSSELGDALKTLG--SVTPDE---VRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTT--TCCHHH---HHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCCCcHHHHHHHHHHhh--cCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            8999999999999999    777777776  467776   8999999999999999999999998763

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.71  E-value=1.5e-08  Score=82.69  Aligned_cols=67  Identities=28%  Similarity=0.329  Sum_probs=57.9

Q ss_pred             HHHHHHHHhh-cCCCC-CcccHHHHHHHHHhcC-----CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          156 SFARRILSIV-DYNQD-GQLSFKEFSDLISAFG-----NQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       156 ~~l~~~f~~~-D~d~d-G~Is~~Ef~~~l~~lg-----~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ..+.++|+.+ |.||+ |+|+.+||..+|..++     ...++++++++|+.+|.|+||.|+++||..+|..+.
T Consensus         9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            4588889887 88875 9999999999998854     346788999999999999999999999999997653

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.70  E-value=9.7e-09  Score=83.71  Aligned_cols=66  Identities=18%  Similarity=0.140  Sum_probs=57.0

Q ss_pred             HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC-----CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIVDYNQDGQLSFKEFSDLISAFG-----NQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg-----~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+.+..+|..+|.| +|.|+.+||..++....     ...+++.++++|+.+|.|+||.|+++||..++..+
T Consensus         8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_           8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence            45689999999987 89999999999998743     33466789999999999999999999999999664

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.69  E-value=1.4e-08  Score=100.16  Aligned_cols=59  Identities=24%  Similarity=0.361  Sum_probs=35.4

Q ss_pred             HHHHhhcCCCCCcccHHHHHHHHHhcCC-cchHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Q 008959          160 RILSIVDYNQDGQLSFKEFSDLISAFGN-QVAANKKEELFKAADKNGDGVVSVDELAALL  218 (547)
Q Consensus       160 ~~f~~~D~d~dG~Is~~Ef~~~l~~lg~-~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l  218 (547)
                      .+|..+|.|++|.|+..||..++..++. .++.+++..+|..+|.|+||+||++||+++|
T Consensus       257 ~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~m  316 (321)
T d1ij5a_         257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLV  316 (321)
T ss_dssp             HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3455566666666666666666665553 3555556666666666666666666666655

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=1.1e-08  Score=84.55  Aligned_cols=63  Identities=24%  Similarity=0.332  Sum_probs=52.8

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCC----------------cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGN----------------QVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~----------------~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ++.+|+.+|.|+||+|+.+||..++..++.                ......++.+|+.+|.|+||.||++||.+++++
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~   96 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR   96 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            688999999999999999999999976321                112345788999999999999999999998754

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.68  E-value=2.9e-08  Score=81.01  Aligned_cols=69  Identities=17%  Similarity=0.251  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHhh-cCCCCC-cccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          154 EKSFARRILSIV-DYNQDG-QLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       154 e~~~l~~~f~~~-D~d~dG-~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ....+..+|..| |.|++| .|+.+||..+|..     ++...++++++++|+.+|.|+||.|+|+||..+|..+.
T Consensus         7 ~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~   82 (93)
T d3c1va1           7 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   82 (93)
T ss_dssp             HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence            345588899988 667665 6999999999987     35567889999999999999999999999999997754

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.67  E-value=2.7e-08  Score=86.95  Aligned_cols=83  Identities=14%  Similarity=0.157  Sum_probs=60.8

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGET  237 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~  237 (547)
                      .+++|..+|.|++|.|+.+||..+|..+|..++.+++..    ++.+++|.|+++||.+++......... .....+.++
T Consensus         7 fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~----~~~~~~~~i~~~eF~~~~~~~~~~~~~-~~~~~l~~a   81 (140)
T d1ggwa_           7 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE----IESTLPAEVDMEQFLQVLNRPNGFDMP-GDPEEFVKG   81 (140)
T ss_dssp             THHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHH----HHTTSCSSEEHHHHHHHHCTTSSSSSS-CCHHHHHHH
T ss_pred             HHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhh----hhccccccccchhhhhhhhhhhhcchh-hHHHHHHHH
Confidence            688999999999999999999999999998888887654    577889999999999988654322111 111234555


Q ss_pred             HhhhcccC
Q 008959          238 LEVADMVN  245 (547)
Q Consensus       238 l~~~D~~~  245 (547)
                      ++..|..+
T Consensus        82 F~~~D~d~   89 (140)
T d1ggwa_          82 FQVFDKDA   89 (140)
T ss_dssp             HHTTCSSC
T ss_pred             HHHHhccC
Confidence            55555433

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.67  E-value=3.3e-08  Score=86.77  Aligned_cols=67  Identities=19%  Similarity=0.322  Sum_probs=47.2

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +++...++++|..+|.+++|.|+.+||..++..+|...+..+   ++..++.+++|.|+++||..++...
T Consensus         3 ~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~   69 (145)
T d2mysb_           3 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEK   69 (145)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhc
Confidence            444555777888888888888888888888887775544433   2344556777888888888877554

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=2.1e-08  Score=82.19  Aligned_cols=68  Identities=18%  Similarity=0.229  Sum_probs=60.6

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+.++...++++|+.+| +++|.|+.+|+..++...|  ++.++++.++..+|.|+||+|+++||..+++-
T Consensus         4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~L   71 (95)
T d2jxca1           4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL   71 (95)
T ss_dssp             SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence            45667777999999999 8999999999999998766  78889999999999999999999999876644

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.65  E-value=9.8e-09  Score=81.03  Aligned_cols=64  Identities=31%  Similarity=0.399  Sum_probs=55.6

Q ss_pred             HHHHHHhhcC-C-CCCcccHHHHHHHHHhc--CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          158 ARRILSIVDY-N-QDGQLSFKEFSDLISAF--GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       158 l~~~f~~~D~-d-~dG~Is~~Ef~~~l~~l--g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ++.+|+.||. + +.|+|+.+||..++..+  +...+.++++++|+.+|.|+||.|+|+||..+|..+
T Consensus         9 l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           9 LKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            9999999975 3 45899999999999986  344566789999999999999999999999999764

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.65  E-value=1.7e-08  Score=89.53  Aligned_cols=124  Identities=23%  Similarity=0.356  Sum_probs=98.3

Q ss_pred             cccChHH-HHHHHHhhCCCC-Cchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh-cC-
Q 008959          115 VFEDSDA-DSEVFDLLDPSS-SNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA-FG-  186 (547)
Q Consensus       115 l~e~~~e-l~~~F~~~D~d~-dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg-  186 (547)
                      +++.+.+ ++++|..+|.|+ +|.|    +..++..++. .++..+   +..++..++.+++|.++++++...+.. +. 
T Consensus         8 Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (156)
T d1dtla_           8 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQ-NPTPEE---LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD   83 (156)
T ss_dssp             SCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCC-CCCHHH---HHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence            4444544 899999999996 8999    7788898886 677777   889999999999999999999886654 22 


Q ss_pred             --CcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          187 --NQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       187 --~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                        ...+.++++.+|+.+|.|++|+|+.+||.+++...+...++    ..+.++++..|.+++
T Consensus        84 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~----~e~~~i~~~~D~d~d  141 (156)
T d1dtla_          84 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE----DDIEELMKDGDKNND  141 (156)
T ss_dssp             ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCH----HHHHHHHHHHCTTSS
T ss_pred             cccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCH----HHHHHHHHHhCCCCC
Confidence              23567889999999999999999999999999888776544    457778887776554

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.64  E-value=1.2e-08  Score=78.33  Aligned_cols=62  Identities=21%  Similarity=0.305  Sum_probs=53.7

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++++|..||.|++|.|    +..++..++....+..+   ++.+++.+|.|+||.|+++||..+|..
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e---~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAE---VEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHH---HHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            458999999999999999    77777777764557777   999999999999999999999998853

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.64  E-value=3.6e-08  Score=87.85  Aligned_cols=71  Identities=15%  Similarity=0.357  Sum_probs=63.5

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .++++...++++|..+|.|++|.|+.+||..++..++...++..+.+++..+|.+++|.+++.||...+..
T Consensus        14 ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~   84 (162)
T d1topa_          14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (162)
T ss_dssp             SCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhh
Confidence            34566667999999999999999999999999999999999999999999999999999999999776644

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=98.64  E-value=2.1e-08  Score=77.89  Aligned_cols=58  Identities=28%  Similarity=0.526  Sum_probs=52.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      ++++|..||.|++|.|    +..++..++. .+++++   +..+++.+|.|++|.|+++||..+|.
T Consensus        10 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~s~~~---~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1          10 FKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAE---LQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             HHHHHHHTCTTSSSEEEGGGHHHHHHHTTC-CCCHHH---HHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCceEeHHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            8999999999999999    7778888876 677777   99999999999999999999999885

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.63  E-value=4.2e-08  Score=80.81  Aligned_cols=73  Identities=19%  Similarity=0.150  Sum_probs=58.8

Q ss_pred             CCChHH--HHHHHHHHHhh-cCCCC-CcccHHHHHHHHHhcCC--cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          149 DPIETE--KSFARRILSIV-DYNQD-GQLSFKEFSDLISAFGN--QVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       149 ~~~~~e--~~~l~~~f~~~-D~d~d-G~Is~~Ef~~~l~~lg~--~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+++.+  ...+..+|+.| |.||+ |+|+..||..++...+.  ..+.+.++++|+.+|.|+||.|+|+||..++..+
T Consensus         5 ~~s~lE~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1           5 PLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            344433  34577888877 77775 99999999999988543  2455679999999999999999999999999764

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.61  E-value=4.2e-08  Score=76.64  Aligned_cols=63  Identities=22%  Similarity=0.442  Sum_probs=55.8

Q ss_pred             hHHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          119 SDADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       119 ~~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +.+++.+|+.||.|++|.|    +..++..++. .++..+   ++.+++.+|.|++|.|+++||..+|..+
T Consensus         8 eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~-~~~~~e---~~~~~~~~D~d~dg~I~~~EF~~~m~~~   74 (75)
T d1jc2a_           8 EEELANCFRIFDKNADGFIDIEELGEILRATGE-HVIEED---IEDLMKDSDKNNDGRIDFDEFLKMMEGV   74 (75)
T ss_dssp             HHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSS-CCCHHH---HHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCC-CccHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            3449999999999999999    7788888886 777777   8999999999999999999999998753

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.61  E-value=3.2e-08  Score=75.47  Aligned_cols=59  Identities=20%  Similarity=0.387  Sum_probs=52.5

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++|+.+|.|++|.|    +..++..++. .+++++   ++.+|+.+|.|++|.|+++||..++..
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~-~~~~~~---i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSP-YFTQED---IVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCT-TSCHHH---HHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhcc-ccchHH---HHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            5789999999999999    7777777776 677777   999999999999999999999999875

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.61  E-value=3.5e-08  Score=80.44  Aligned_cols=71  Identities=17%  Similarity=0.091  Sum_probs=59.5

Q ss_pred             hHHHHHHHHHHHhh-cCCCCC-cccHHHHHHHHHhc-----CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          152 ETEKSFARRILSIV-DYNQDG-QLSFKEFSDLISAF-----GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       152 ~~e~~~l~~~f~~~-D~d~dG-~Is~~Ef~~~l~~l-----g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      +.....+..+|+.+ |.+|+| +|+.+||..+|...     +...++++++++++.+|.|+||.|+|+||..++..+.
T Consensus         5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_           5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC   82 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            33445577888877 999999 59999999999873     3345788999999999999999999999999997754

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.60  E-value=2.8e-08  Score=75.42  Aligned_cols=59  Identities=19%  Similarity=0.404  Sum_probs=52.1

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      ++++++|+.||+|++|.|    +..++..++. .+++.+   ++.+++.+|.|++|.|+++||..+|
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~-~~~~~e---~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEE---VDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHH---HHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC-CCCHHH---HHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            448999999999999999    7777888876 677777   9999999999999999999999864

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.60  E-value=3.3e-08  Score=78.40  Aligned_cols=66  Identities=24%  Similarity=0.408  Sum_probs=56.3

Q ss_pred             cccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          115 VFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       115 l~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +++.+.+ ++++|..||.|++|.|    +..++..++. .+++.+   +..+|..+|.|++|.|+++||..+|..
T Consensus         8 Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~s~~e---~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_           8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQ-NPTKEE---LDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             BCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-CCCHHH---HHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            3444444 8899999999999999    7778888876 677777   899999999999999999999998864

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=6.8e-08  Score=83.64  Aligned_cols=71  Identities=18%  Similarity=0.368  Sum_probs=65.3

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      +++...++++|..+|.|++|+|+++||..++...+..++.+.+..++..+|.+++|.|+++||...+....
T Consensus         2 ~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~   72 (141)
T d2obha1           2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKM   72 (141)
T ss_dssp             HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHH
Confidence            45566799999999999999999999999999999999999999999999999999999999999887654

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.59  E-value=3.8e-08  Score=87.10  Aligned_cols=92  Identities=13%  Similarity=0.149  Sum_probs=68.8

Q ss_pred             ChHHHHHHHHHHHhhcC--CCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCccc
Q 008959          151 IETEKSFARRILSIVDY--NQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLM  228 (547)
Q Consensus       151 ~~~e~~~l~~~f~~~D~--d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~  228 (547)
                      ++++...++++|..||.  |++|.|+..||..+|..+|..++++++..+. ..|.+++|.|+++||..++......... 
T Consensus         2 s~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~-   79 (152)
T d1wdcc_           2 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG-   79 (152)
T ss_dssp             CHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC-
T ss_pred             CHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh-
Confidence            45666679999999995  8899999999999999999988888887653 4688889999999999998765432211 


Q ss_pred             ccchhHHHHHhhhcccC
Q 008959          229 NCCPVCGETLEVADMVN  245 (547)
Q Consensus       229 ~~~~~~~~~l~~~D~~~  245 (547)
                       ....+.++++..|..+
T Consensus        80 -~~~~l~~aF~~~D~~~   95 (152)
T d1wdcc_          80 -TFADYMEAFKTFDREG   95 (152)
T ss_dssp             -CHHHHHHHHHTTCSSS
T ss_pred             -HHHhhhhhhhcccccc
Confidence             1123555565555433

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.55  E-value=6.3e-08  Score=77.90  Aligned_cols=66  Identities=15%  Similarity=0.155  Sum_probs=57.7

Q ss_pred             HHHHHHHHhh-cCCCCCc-ccHHHHHHHHHh-cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIV-DYNQDGQ-LSFKEFSDLISA-FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~-D~d~dG~-Is~~Ef~~~l~~-lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+|+.+ |.||+|. ++.+||..++.. ++..++.++++++++.+|.|+||.|+|+||..++..+
T Consensus        10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l   78 (87)
T d1xk4a1          10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM   78 (87)
T ss_dssp             HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            4467777777 8999986 589999999976 7878888899999999999999999999999999764

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.55  E-value=4e-08  Score=77.02  Aligned_cols=65  Identities=28%  Similarity=0.444  Sum_probs=55.6

Q ss_pred             ccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          116 FEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+.+ ++++|..||.|++|.|    +..++..++. .++..+   +..+++.+|.+++|.|+++||..++..
T Consensus         5 t~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~t~~e---~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_           5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAE---VNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             CHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTC-CCCHHH---HHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            333444 8999999999999999    7778888876 677777   999999999999999999999998843

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.54  E-value=5.3e-08  Score=77.44  Aligned_cols=64  Identities=22%  Similarity=0.398  Sum_probs=55.1

Q ss_pred             cChHH-HHHHHHhhCCCC-Cchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          117 EDSDA-DSEVFDLLDPSS-SNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       117 e~~~e-l~~~F~~~D~d~-dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +.+.+ ++++|+.||.|+ +|.|    +..++..++. .+++.+   ++.+++.+|.|++|.|+|+||..++..
T Consensus        11 ~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~-~~t~~e---l~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          11 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQ-NPTPEE---LQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTC-CCCHHH---HHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCC-CCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            33444 889999999995 7999    7788888886 778877   999999999999999999999999864

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.54  E-value=5.4e-08  Score=80.27  Aligned_cols=62  Identities=19%  Similarity=0.303  Sum_probs=57.3

Q ss_pred             HHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          157 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       157 ~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ..+.+|+.+|.|++|+|+.+|+..++...|  ++.+++.++|+.+|.|++|.|+++||..+|+-
T Consensus        12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~L   73 (99)
T d1qjta_          12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence            377899999999999999999999998766  78999999999999999999999999988854

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.53  E-value=2.7e-07  Score=82.66  Aligned_cols=119  Identities=13%  Similarity=0.154  Sum_probs=79.6

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcC---CCCCChHH--HHHHHHHHHh--hcCCCCCcccHHHHHHHHHhcCCc--
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCS---VEDPIETE--KSFARRILSI--VDYNQDGQLSFKEFSDLISAFGNQ--  188 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~---~~~~~~~e--~~~l~~~f~~--~D~d~dG~Is~~Ef~~~l~~lg~~--  188 (547)
                      ++.+|+.+|.|++|.|    +..++..+.   ........  .......+..  .|.+++|.|+++||..++......  
T Consensus         8 l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~   87 (174)
T d2scpa_           8 MKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPE   87 (174)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTSCGG
T ss_pred             HHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhcchh
Confidence            8899999999999999    333332221   11111111  1112233332  377889999999999998774322  


Q ss_pred             ---chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          189 ---VAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       189 ---~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                         .....+..+|+.+|.|+||.||.+||..++...+...      ..+..++...|.+++
T Consensus        88 ~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~------~~~~~~f~~~D~d~d  142 (174)
T d2scpa_          88 AKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDK------TMAPASFDAIDTNND  142 (174)
T ss_dssp             GTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCG------GGHHHHHHHHCTTCS
T ss_pred             hHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhh------HHHHHHHhhcCCCCC
Confidence               1234578899999999999999999999998765432      235666776776655

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=98.53  E-value=1.2e-07  Score=79.63  Aligned_cols=85  Identities=19%  Similarity=0.255  Sum_probs=63.5

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGET  237 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~  237 (547)
                      +.+++..+|  .+|.|+|.||..++...  ..++++++++|+.+|+|++|+|+.+||.++|..+...-..+.. ..+.++
T Consensus        11 i~~~~~~~~--~~G~idf~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~-~e~~~~   85 (109)
T d5pala_          11 INKAISAFK--DPGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLND-TETKAL   85 (109)
T ss_dssp             HHHHHHHTC--STTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCH-HHHHHH
T ss_pred             HHHHHHhcC--CCCcCcHHHHHHHHHhc--CCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCH-HHHHHH
Confidence            777887776  45889999999877432  3467899999999999999999999999999876332111111 357888


Q ss_pred             HhhhcccCcc
Q 008959          238 LEVADMVNTM  247 (547)
Q Consensus       238 l~~~D~~~~l  247 (547)
                      ++..|.+++.
T Consensus        86 ~~~~D~d~dG   95 (109)
T d5pala_          86 LAAGDSDHDG   95 (109)
T ss_dssp             HHHHCTTCSS
T ss_pred             HHHhCCCCCC
Confidence            8887766543

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.53  E-value=8.7e-08  Score=80.41  Aligned_cols=85  Identities=22%  Similarity=0.303  Sum_probs=62.7

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGET  237 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~  237 (547)
                      +..++..+  +++|.|++.||..++...  ..++++++++|+.+|.|++|+|+.+||..++..+...-..... ..+.++
T Consensus        11 I~~~~~~~--d~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~-~ev~~~   85 (109)
T d1pvaa_          11 IKKALDAV--KAEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTD-AETKAF   85 (109)
T ss_dssp             HHHHHHHT--CSTTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCH-HHHHHH
T ss_pred             HHHHHHhc--CCCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCH-HHHHHH
Confidence            77777765  466889999999887532  3467889999999999999999999999999776432111111 347778


Q ss_pred             HhhhcccCcc
Q 008959          238 LEVADMVNTM  247 (547)
Q Consensus       238 l~~~D~~~~l  247 (547)
                      +...|.+++.
T Consensus        86 ~~~~D~d~dG   95 (109)
T d1pvaa_          86 LKAADKDGDG   95 (109)
T ss_dssp             HHHHCTTCSS
T ss_pred             HHHHCCCCcC
Confidence            8877766554

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=98.51  E-value=6.8e-08  Score=76.54  Aligned_cols=61  Identities=18%  Similarity=0.379  Sum_probs=53.9

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      .+++++|..||.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..++..
T Consensus        15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~e---v~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          15 EELSDLFRMFDKNADGYIDLEELKIMLQATGE-TITEDD---IEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSS-CCCHHH---HHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCC-CCCHHH---HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            449999999999999999    7777887776 677777   899999999999999999999998854

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=98.51  E-value=7.7e-08  Score=75.36  Aligned_cols=61  Identities=20%  Similarity=0.353  Sum_probs=53.7

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++++++|+.+|.|++|.|    +..++..++. .++..+   +..+|+.+|.|++|.|+++||..+|..
T Consensus         9 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~~e---~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           9 EEILKAFRLFDDDNSGTITIKDLRRVAKELGE-NLTEEE---LQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTC-CCCHHH---HHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCEechHHHHHHHHHhCC-CCCHHH---HHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            349999999999999999    7777777776 666777   899999999999999999999999875

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.1e-08  Score=84.42  Aligned_cols=69  Identities=12%  Similarity=0.197  Sum_probs=60.1

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      .+.++...++.+|+.+|.|++|.|+.+|+..++...+  ++.+++.++++.+|.|++|+|+++||..+|+-
T Consensus        16 lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~L   84 (110)
T d1iq3a_          16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             CSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHHHH
Confidence            3455566689999999999999999999999997655  77888999999999999999999999977743

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.50  E-value=8.1e-08  Score=77.58  Aligned_cols=67  Identities=24%  Similarity=0.321  Sum_probs=58.4

Q ss_pred             HHHHHHHHHhh-cCCCCC-cccHHHHHHHHHh---cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          155 KSFARRILSIV-DYNQDG-QLSFKEFSDLISA---FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       155 ~~~l~~~f~~~-D~d~dG-~Is~~Ef~~~l~~---lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ...+..+|..| |+||+| +|+..||..++..   .+...++++++++++.+|.|+||.|+|+||..++..+
T Consensus         8 i~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l   79 (89)
T d1k8ua_           8 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   79 (89)
T ss_dssp             HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            34577888877 999998 6999999999987   4556677899999999999999999999999999765

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=5.5e-08  Score=85.28  Aligned_cols=61  Identities=13%  Similarity=0.373  Sum_probs=32.8

Q ss_pred             HHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHH-HhcCCCCCCcCHHHHHHHHH
Q 008959          159 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFK-AADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       159 ~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~-~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +++|..+|.|++|.|+.+||..++..+|..++.+++..++. ..+.+.+|.|+++||..++.
T Consensus         5 k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~   66 (146)
T d1m45a_           5 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIE   66 (146)
T ss_dssp             TTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHH
T ss_pred             HHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhh
Confidence            44555666666666666666666655555555555555554 23444455566666655554

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.41  E-value=1e-07  Score=78.72  Aligned_cols=65  Identities=15%  Similarity=0.162  Sum_probs=53.0

Q ss_pred             HHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCc-------chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQ-------VAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~-------~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+|..+| +++|.|+..||..++......       .+++.+.++|+.+|.|+||.|+|+||..++..+
T Consensus        10 ~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_          10 IGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            34556666665 789999999999999885432       244568999999999999999999999999775

>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6.1e-08  Score=83.17  Aligned_cols=51  Identities=20%  Similarity=0.287  Sum_probs=45.6

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +|+|+|+|++|+      ..+++||||++.+|++.+||+++++++||+|||.+...+
T Consensus         5 ~G~L~V~v~~A~~L~~~d~~g~~Dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~v   61 (126)
T d2ep6a1           5 VGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPI   61 (126)
T ss_dssp             SEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEE
T ss_pred             cEEEEEEEEEeECCCCCCCCCCcCeEEEEEcCCeEEEEEeeCCceeEEEEEEEEEEE
Confidence            599999999995      467889999999999999999999999999999665544

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.6e-07  Score=81.35  Aligned_cols=65  Identities=12%  Similarity=0.259  Sum_probs=58.4

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcC--CCCCCcCHHHHHHHHHhhh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADK--NGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~--d~dG~Is~~Ef~~~l~~l~  222 (547)
                      ++++|..+|.+++|.|+.+||..+|..+|...+.+++..++..++.  +++|.|+++||..++....
T Consensus         2 ~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~   68 (139)
T d1w7jb1           2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA   68 (139)
T ss_dssp             HHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHC
T ss_pred             HHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhh
Confidence            6889999999999999999999999999999999999999887764  6789999999999887643

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.38  E-value=2.4e-07  Score=69.11  Aligned_cols=56  Identities=18%  Similarity=0.375  Sum_probs=49.6

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHH
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD  180 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~  180 (547)
                      +++++|..||++++|.|    +..++..++. .+++.+   +..+|+.+|.|++|.|+++||.+
T Consensus         2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~-~~~~~e---i~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGE-KLTDAE---VDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTC-CCCHHH---HHHHHTTCCCCTTSEECHHHHHH
T ss_pred             hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCC-CCCHHH---HHHHHHHcCCCCCCcEeHHHhcC
Confidence            47899999999999999    7778887776 677777   99999999999999999999974

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.37  E-value=5.7e-08  Score=78.14  Aligned_cols=63  Identities=19%  Similarity=0.356  Sum_probs=53.4

Q ss_pred             ccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          116 FEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       116 ~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      ++.+.. ++++|+.+|.|++|.|    +..++..++. .+++.+   ++.+|+.+|.|++|.|+++||..++
T Consensus        18 ~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~-~~s~~e---~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          18 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS-ELMESE---IKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTS-SCCHHH---HHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCC-CCCHHH---HHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            333443 8899999999999999    7778888876 677777   9999999999999999999998754

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.34  E-value=9.3e-07  Score=70.79  Aligned_cols=66  Identities=23%  Similarity=0.230  Sum_probs=54.5

Q ss_pred             HHHHHHHHhh-cCCCCC-cccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIV-DYNQDG-QLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~-D~d~dG-~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+|..+ +.++++ +|+.+||..++..     ++...+++.++++++.+|.|+||.|+|+||..++..+
T Consensus         8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l   80 (87)
T d1e8aa_           8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   80 (87)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            4477888877 556664 6999999999987     2334567899999999999999999999999999764

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.31  E-value=5.7e-07  Score=81.05  Aligned_cols=126  Identities=18%  Similarity=0.188  Sum_probs=88.8

Q ss_pred             cccChHH-HHHHHHh-hCCCCCchh----HHHHhhhcCCCC---CChHH--------HHHHHHHHHhhcCCCCCcccHHH
Q 008959          115 VFEDSDA-DSEVFDL-LDPSSSNKI----VGKISLSCSVED---PIETE--------KSFARRILSIVDYNQDGQLSFKE  177 (547)
Q Consensus       115 l~e~~~e-l~~~F~~-~D~d~dG~I----l~~ll~~l~~~~---~~~~e--------~~~l~~~f~~~D~d~dG~Is~~E  177 (547)
                      |++.+.. ++.+|+. +|.|+||.|    +..++..+....   .....        ...+..++...|.+++|.|+++|
T Consensus         2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~   81 (185)
T d2sasa_           2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence            4455555 9999996 599999999    555555554311   10111        23355678888999999999999


Q ss_pred             HHHHHHhcC-C--------cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCc
Q 008959          178 FSDLISAFG-N--------QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNT  246 (547)
Q Consensus       178 f~~~l~~lg-~--------~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~  246 (547)
                      |..++.... .        ......+..+|+.+|.|++|+||.+||..++..++-.  .    ..+..++...|.+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~--~----~~~~~~f~~~D~d~d  153 (185)
T d2sasa_          82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQ--C----ADVPAVYNVITDGGK  153 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCC--C----SSHHHHHHHHHTTTT
T ss_pred             hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCC--H----HHHHHHHHHcCCCCC
Confidence            999886521 1        1233468899999999999999999999999765532  1    246777777776554

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=98.30  E-value=1.4e-06  Score=78.80  Aligned_cols=121  Identities=17%  Similarity=0.275  Sum_probs=82.5

Q ss_pred             HHHHHHhhCCCCCchh-HHHH---hhh-----cCCCCCChHH--HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC---
Q 008959          122 DSEVFDLLDPSSSNKI-VGKI---SLS-----CSVEDPIETE--KSFARRILSIVDYNQDGQLSFKEFSDLISAFGN---  187 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~l---l~~-----l~~~~~~~~e--~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~---  187 (547)
                      ++++|+.+|.|++|.| ..++   +..     ++. .++..+  .......+.......++.+++.++..++..+..   
T Consensus        14 ~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (187)
T d1uhka1          14 HKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGA-TPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDEL   92 (187)
T ss_dssp             HHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCC-CHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhcc-CccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHHHHHHHH
Confidence            8899999999999999 4443   222     222 222222  112233344455667778999999887765321   


Q ss_pred             --------cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCcc
Q 008959          188 --------QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       188 --------~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l  247 (547)
                              ......++.+|+.+|.|++|+|+.+||.+++..++.....    ..+..++...|.+++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~----~~~~~lf~~~D~d~dG  156 (187)
T d1uhka1          93 EKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSS----EDCEETFRVCDIDESG  156 (187)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSH----HHHHHHHHHSCCCTTS
T ss_pred             HhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccH----HHHHHHHHHhCCCCCC
Confidence                    1123447889999999999999999999999998775443    3577778777766553

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=98.28  E-value=1.1e-06  Score=73.37  Aligned_cols=85  Identities=14%  Similarity=0.220  Sum_probs=65.1

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHH
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGET  237 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~  237 (547)
                      +..++..++.  +|.|++.||..++....  .++++++.+|+.+|.|++|+|+.+||..++..++........ ..+..+
T Consensus        11 i~~~~~~~~~--~~~i~f~eF~~~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~-~e~~~~   85 (109)
T d1rwya_          11 IKKAIGAFTA--ADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA-KETKTL   85 (109)
T ss_dssp             HHHHHHTTCS--TTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCH-HHHHHH
T ss_pred             HHHHHHhccc--CCCcCHHHHHHHHcccc--CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCH-HHHHHH
Confidence            7788887754  57899999999875322  467889999999999999999999999999987653222222 357788


Q ss_pred             HhhhcccCcc
Q 008959          238 LEVADMVNTM  247 (547)
Q Consensus       238 l~~~D~~~~l  247 (547)
                      ++..|.+++.
T Consensus        86 ~~~~D~d~dG   95 (109)
T d1rwya_          86 MAAGDKDGDG   95 (109)
T ss_dssp             HHHHCTTCSS
T ss_pred             HHHhCCCCCC
Confidence            8887766553

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.27  E-value=1.5e-06  Score=78.86  Aligned_cols=121  Identities=20%  Similarity=0.320  Sum_probs=83.0

Q ss_pred             HHHHHHhhCCCCCchh-HHHHhh--------hcCCCCCChHH--HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCC---
Q 008959          122 DSEVFDLLDPSSSNKI-VGKISL--------SCSVEDPIETE--KSFARRILSIVDYNQDGQLSFKEFSDLISAFGN---  187 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I-l~~ll~--------~l~~~~~~~~e--~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~---  187 (547)
                      ++.+|+.+|.|++|.| +.++..        .++. .++..+  .......+...+.+.++.|+++|+..++.....   
T Consensus        16 ~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~~~   94 (189)
T d1qv0a_          16 HKHMFDFLDINGNGKITLDEIVSKASDDICAKLEA-TPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSEL   94 (189)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTC-CHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCC-CchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHHHHHHhh
Confidence            8899999999999999 555432        2332 333322  122334456677888999999999998865311   


Q ss_pred             --------cchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCcc
Q 008959          188 --------QVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       188 --------~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l  247 (547)
                              ....+.+..+|+.+|.|++|+|+.+||.+++..++....+    ..+..++...|.+++.
T Consensus        95 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~----~~~~~lf~~~D~d~dG  158 (189)
T d1qv0a_          95 KKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ----EDCEATFRHCDLDNAG  158 (189)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCH----HHHHHHHHHSCCCTTS
T ss_pred             hccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCH----HHHHHHHHHhCCCCCC
Confidence                    1233457789999999999999999999999998876554    4577778777766553

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.25  E-value=6.2e-07  Score=74.87  Aligned_cols=61  Identities=16%  Similarity=0.396  Sum_probs=49.8

Q ss_pred             HHHHHHHHhhCCCCCchh----HHHHhhhcCC--CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          120 DADSEVFDLLDPSSSNKI----VGKISLSCSV--EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       120 ~el~~~F~~~D~d~dG~I----l~~ll~~l~~--~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      ++++++|+.||.|++|+|    +..++..+..  ..+++++   ++.+|+.+|.|+||.|+++||..+++
T Consensus        41 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~---~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          41 SQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESE---TKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHH---HHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHH---HHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            339999999999999999    5555555432  2355566   89999999999999999999999885

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=98.24  E-value=1.2e-06  Score=72.94  Aligned_cols=90  Identities=14%  Similarity=0.135  Sum_probs=67.7

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccc
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMN  229 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~  229 (547)
                      .+.++   +..+++.+|.+  |.|++.||..++....  .+.++++.+|+.+|.|++|+|+.+||..++..++.......
T Consensus         5 ls~~d---i~~~~~~~~~~--gsi~~~eF~~~~~l~~--~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~   77 (107)
T d2pvba_           5 LKDAD---VAAALAACSAA--DSFKHKEFFAKVGLAS--KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT   77 (107)
T ss_dssp             SCHHH---HHHHHHHTCST--TCCCHHHHHHHHTGGG--SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC
T ss_pred             CCHHH---HHHHHHhccCC--CCcCHHHHHHHHhccc--CCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCC
Confidence            44556   78888877655  5699999998875322  46678999999999999999999999999988754322222


Q ss_pred             cchhHHHHHhhhcccCcc
Q 008959          230 CCPVCGETLEVADMVNTM  247 (547)
Q Consensus       230 ~~~~~~~~l~~~D~~~~l  247 (547)
                      . ..+.++++..|.+++.
T Consensus        78 ~-~~~~~l~~~~D~d~dG   94 (107)
T d2pvba_          78 D-AETKAFLADGDKDGDG   94 (107)
T ss_dssp             H-HHHHHHHHHHCTTCSS
T ss_pred             H-HHHHHHHHHhCCCCCC
Confidence            2 4688888888866553

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=9.2e-08  Score=86.60  Aligned_cols=99  Identities=11%  Similarity=0.117  Sum_probs=68.1

Q ss_pred             HHHHHHh--hCCCCCchh-HHHHhhhcCCCCCC-hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHH
Q 008959          122 DSEVFDL--LDPSSSNKI-VGKISLSCSVEDPI-ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL  197 (547)
Q Consensus       122 l~~~F~~--~D~d~dG~I-l~~ll~~l~~~~~~-~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~  197 (547)
                      ++++|..  +|.|++|.| +.++...+...... ......+..+|...|.+++|.|+|+||..++..+.   ...++..+
T Consensus         7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r~ei~~~   83 (170)
T d2zkmx1           7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PRPEIDEI   83 (170)
T ss_dssp             HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CCHHHHTT
T ss_pred             HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CHHHHHHH
Confidence            4555554  799999999 66666555321111 11223466678889999999999999999998765   34689999


Q ss_pred             HHHhcCCCCCCcCHHHHHHHHHhhhc
Q 008959          198 FKAADKNGDGVVSVDELAALLALQQE  223 (547)
Q Consensus       198 F~~~D~d~dG~Is~~Ef~~~l~~l~~  223 (547)
                      |..+|.|++|.||.+||..+|.+.+.
T Consensus        84 F~~~d~d~~~~it~~el~~fL~~~Q~  109 (170)
T d2zkmx1          84 FTSYHAKAKPYMTKEHLTKFINQKQR  109 (170)
T ss_dssp             CC--------CCCHHHHHHHHHHTCC
T ss_pred             HHHHcCCCCCcccHHHHHHHHHHHhc
Confidence            99999999999999999999988654

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.18  E-value=4e-07  Score=58.83  Aligned_cols=31  Identities=29%  Similarity=0.502  Sum_probs=20.4

Q ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          191 ANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       191 ~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      +++++++|+.||+|++|+|+.+||..+|+.+
T Consensus         2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~l   32 (33)
T d2hf5a1           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNL   32 (33)
T ss_dssp             HHHHHHHHHHHSSSCCSCBCHHHHHHHTTSC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence            4566666777777777777777766666543

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.18  E-value=8.3e-07  Score=78.95  Aligned_cols=120  Identities=19%  Similarity=0.189  Sum_probs=88.2

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCC---CCChHH--------HHHHHHHHHhhcCCCCCcccHHHHHHHHHhcC
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVE---DPIETE--------KSFARRILSIVDYNQDGQLSFKEFSDLISAFG  186 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~---~~~~~e--------~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg  186 (547)
                      ++++|+.+|.|++|.|    +..++..+...   .+...+        ...+..++...|.+++|.|++.++...+....
T Consensus         9 l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~   88 (176)
T d1nyaa_           9 LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLI   88 (176)
T ss_dssp             HHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Confidence            8999999999999999    66666655542   121111        23345677888999999999999999886632


Q ss_pred             Cc--------chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhhccCcccccchhHHHHHhhhcccCcc
Q 008959          187 NQ--------VAANKKEELFKAADKNGDGVVSVDELAALLALQQEKEPLMNCCPVCGETLEVADMVNTM  247 (547)
Q Consensus       187 ~~--------~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~~~~~~~~~~~~~~~~l~~~D~~~~l  247 (547)
                      ..        ...+.++.+|..+|.|++|.|+.+||.+++..++..  .    ..+.+++...|.+++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~--~----~~~~~~f~~~D~d~dG  151 (176)
T d1nyaa_          89 FEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMS--K----AEAAEAFNQVDTNGNG  151 (176)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCC--H----HHHHHHHHHHCTTCSS
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCc--H----HHHHHHHHHHCCCCCC
Confidence            21        223467889999999999999999999999876532  1    3477777777766653

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=9e-07  Score=72.07  Aligned_cols=56  Identities=25%  Similarity=0.222  Sum_probs=46.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      ++++|+.+|.|++|.|    +..++...+   .+..+   +..+|+.+|.|++|.|+++||..+|.
T Consensus        12 ~~~~F~~~D~d~~G~is~~e~~~~l~~~~---l~~~~---l~~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_          12 YDEIFLKTDKDMDGFVSGLEVREIFLKTG---LPSTL---LAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHTTT---CCHHH---HHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCcHHHHHHHHHhcC---CCHHH---HHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            8899999999999999    555555443   44555   89999999999999999999998774

>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2 domain protein At1g63220
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.11  E-value=6.2e-07  Score=77.62  Aligned_cols=51  Identities=16%  Similarity=0.211  Sum_probs=44.8

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEcccceEeeeecC-CCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISD-NTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~-~tLnP~Wne~~kll~  103 (547)
                      .|+|+|+|++|+      ..+++||||+++++.+.++|++++ .++||+|||.+.+.+
T Consensus         9 ~G~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~t~~~~~~~~nP~Wne~f~f~v   66 (136)
T d1wfja_           9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTV   66 (136)
T ss_dssp             EEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEE
T ss_pred             cEEEEEEEEEeeCCCCCCCCCCCCccEEEEEeeeeEEEEEEecCCCcEEEeeEEEEEE
Confidence            699999999995      358899999999999999999987 589999999765544

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=1.2e-06  Score=70.89  Aligned_cols=56  Identities=20%  Similarity=0.315  Sum_probs=47.2

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      ++++|+.+|.|++|.|    +..++...+   .+..+   +..+|+.+|.|++|.|+++||..++.
T Consensus        11 y~~~F~~~D~d~~G~i~~~e~~~~l~~~~---l~~~~---l~~i~~~~D~d~dG~l~~~EF~~a~~   70 (92)
T d1fi6a_          11 YVNQFKTIQPDLNGFIPGSAAKEFFTKSK---LPILE---LSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHTTTCCSTTCEEEHHHHHHHHHHHS---SCHHH---HHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHhCCCcccchhHHHHHHHHHHcc---CCHHH---HHHHHHHhCCCCCCeecHHHHHHHHH
Confidence            8899999999999999    555666553   34555   99999999999999999999987664

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=2.7e-06  Score=67.11  Aligned_cols=57  Identities=18%  Similarity=0.244  Sum_probs=51.3

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI  182 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l  182 (547)
                      +.++|..+|.+++|.|    +..++..++. .+++.+   +..+|..+|.|++|.|++.||...+
T Consensus        22 l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~-~l~~~e---~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          22 ITQEFENFDTMKTNTISREEFRAICNRRVQ-ILTDEQ---FDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHTC-CCCHHH---HHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHCCCCCceEChhHHHHHHHHhCC-CCChhH---HHHHhhccccCCCCcEeHHHHHHHh
Confidence            8899999999999999    7778887776 677777   9999999999999999999999875

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=97.99  E-value=1.3e-06  Score=85.39  Aligned_cols=72  Identities=15%  Similarity=0.323  Sum_probs=59.6

Q ss_pred             CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          150 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       150 ~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      .+.++...++++|..+|.|++|.|+.+||..+|..+|..++.++++.+|..+|.|++|.|++.||..++...
T Consensus       116 l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~  187 (321)
T d1ij5a_         116 LSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDL  187 (321)
T ss_dssp             CCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhh
Confidence            345556668888999999999999999999988888888888889999999999999999999888766543

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.98  E-value=3.3e-06  Score=65.58  Aligned_cols=63  Identities=19%  Similarity=0.304  Sum_probs=49.2

Q ss_pred             HHHHHHHHhhCCC--CCchh----HHHHhhhcCCCC-CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          120 DADSEVFDLLDPS--SSNKI----VGKISLSCSVED-PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       120 ~el~~~F~~~D~d--~dG~I----l~~ll~~l~~~~-~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++++++|+.||.+  ++|.|    +..++..++... ....+   +..+++.+|.|+||.|+++||..++..+
T Consensus         5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~e---i~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMST---LDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCS---HHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHH---HHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            4489999999664  46899    777777776421 22334   8899999999999999999999998764

>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: E3 ubiquitin-protein ligase Itchy
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.5e-06  Score=75.06  Aligned_cols=50  Identities=24%  Similarity=0.337  Sum_probs=43.4

Q ss_pred             eEEEEEEeecc------cccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           54 GIALLTLISAE------MKFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        54 gi~~i~~~~A~------~~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +-|.|+|++|+      ..+++|||+++.+|.+.+||+++++++||+|||.+.+.+
T Consensus         6 ~~L~v~v~~A~~~~~~~~~~~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~~   61 (133)
T d2nq3a1           6 SQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIV   61 (133)
T ss_dssp             EEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEE
T ss_pred             eEEEEEEEEeECCCcCCCCCCcCeEEEEEECCeEEeeEEEEecccEEEcceEEEEE
Confidence            56899999996      367899999999999999999999999999999665433

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=97.96  E-value=2.4e-06  Score=55.05  Aligned_cols=29  Identities=21%  Similarity=0.479  Sum_probs=27.4

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhcC
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAFG  186 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg  186 (547)
                      ++++|+.||.|++|+|+..|+..+|..+|
T Consensus         5 l~eAF~~FDkDg~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           5 IREAFRVFDKDGNGYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            99999999999999999999999998765

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=7e-06  Score=67.01  Aligned_cols=63  Identities=19%  Similarity=0.187  Sum_probs=46.4

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcC----CC-CC-------ChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCS----VE-DP-------IETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~----~~-~~-------~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ++.+|..+|.|+||.|    +..++..+.    .. ..       .......++.+|+.+|.|+||.||++||..++..
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~   96 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR   96 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            7899999999999999    444443321    10 00       1122345889999999999999999999998764

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=7.1e-06  Score=68.49  Aligned_cols=64  Identities=22%  Similarity=0.267  Sum_probs=50.2

Q ss_pred             ecccChHH-HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          114 SVFEDSDA-DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       114 sl~e~~~e-l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      .+++.+.+ +.++|+.+|+|++|.|    +..++...   .....+   +..+|+.+|.|++|.|+++||..+|.
T Consensus        15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s---~L~~~~---L~~Iw~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKS---KLSIPE---LSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSS---SCSSCC---HHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhh---ccchHH---HHHHHHHhccCCCCeECHHHHHHHHH
Confidence            34555555 8999999999999999    44444433   344445   88999999999999999999998774

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=97.89  E-value=3.3e-05  Score=61.77  Aligned_cols=66  Identities=18%  Similarity=0.295  Sum_probs=53.7

Q ss_pred             HHHHHHHHhh-cCCCC-CcccHHHHHHHHHh-c----CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIV-DYNQD-GQLSFKEFSDLISA-F----GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~-D~d~d-G~Is~~Ef~~~l~~-l----g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+|..+ ..+|+ ++|+..||..++.. +    +....++.++++|+.+|.|+||.|+|+||..++..+
T Consensus         9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (90)
T d3cr5x1           9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI   81 (90)
T ss_dssp             HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            3467788877 45555 57999999999987 3    334566789999999999999999999999998664

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=8.5e-06  Score=66.12  Aligned_cols=55  Identities=22%  Similarity=0.287  Sum_probs=45.1

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      ++++|+.+| +++|.|    +..++...+   ....+   ++.+|..+|.|++|.|+++||..++.
T Consensus        12 y~~~F~~~D-~~~G~i~~~el~~~l~~~g---l~~~~---L~~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1          12 YDAIFDSLS-PVNGFLSGDKVKPVLLNSK---LPVDI---LGRVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             HHHHHHHTC-CBTTEEEHHHHHHHHTTSS---CCHHH---HHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHhC-CCCCceeHHHHHHHHHHcC---CCHHH---HHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            899999999 899999    445555443   44555   99999999999999999999987664

>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from protein kinase C epsilon
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.83  E-value=5.4e-06  Score=71.74  Aligned_cols=52  Identities=19%  Similarity=0.320  Sum_probs=44.0

Q ss_pred             ceeEEEEEEeecc-----------------cccCCceEEEEEcccceE-eeeecCCCCCCCchhhHHHHH
Q 008959           52 FAGIALLTLISAE-----------------MKFKDKWLACVSLGEQTC-RTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        52 ~~gi~~i~~~~A~-----------------~~~~dd~~~~v~~g~~~f-rT~vi~~tLnP~Wne~~kll~  103 (547)
                      +.|+|+|+|++|+                 ..+..||||++.+|++.. ||++.+++.+|+|||.+.+.+
T Consensus         4 ~~G~L~v~I~~A~~L~~~~~~~~~~~~~~~~~~~~DPYv~v~l~~~~~~~T~~~~~t~~P~Wne~f~f~v   73 (136)
T d1gmia_           4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDV   73 (136)
T ss_dssp             EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEE
T ss_pred             EEEEEEEEEEEeECCCcccccccccccccCCCCCcCcEEEEEeCCCcCcEeeEEcCCCCccCccEEEEEE
Confidence            6799999999994                 245679999999999775 899999999999999666544

>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from cytosolic phospholipase A2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=3.2e-06  Score=71.83  Aligned_cols=51  Identities=18%  Similarity=0.208  Sum_probs=43.1

Q ss_pred             eeEEEEEEeecc---------cccCCceEEEEEccc---ceEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAE---------MKFKDKWLACVSLGE---QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~---------~~~~dd~~~~v~~g~---~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      .+.|+|+|++|+         +.++.||||++.++.   +..||+++++++||.|||.+...+
T Consensus         2 s~~l~V~v~~a~~L~~~~~~d~~~~~Dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~f~i   64 (126)
T d1rlwa_           2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFIL   64 (126)
T ss_dssp             CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEE
T ss_pred             CcEEEEEEEEccCCCCccccccCCCCCcEEEEEECCcccceeEeeecCCCccceeceeeeecc
Confidence            367999999995         246789999999976   789999999999999999766544

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=2e-06  Score=77.42  Aligned_cols=108  Identities=11%  Similarity=0.072  Sum_probs=66.3

Q ss_pred             CCCcccceecccChH-------H-------HHHHHHhhCCCCCchh-HH---HHhhhcCCCCCChHHHHHHHHHHHhhcC
Q 008959          106 NGPHVARISVFEDSD-------A-------DSEVFDLLDPSSSNKI-VG---KISLSCSVEDPIETEKSFARRILSIVDY  167 (547)
Q Consensus       106 ~~~~~~~isl~e~~~-------e-------l~~~F~~~D~d~dG~I-l~---~ll~~l~~~~~~~~e~~~l~~~f~~~D~  167 (547)
                      ..++.|.+++.+...       .       +..+|...|.+++|.+ +.   .++..+..    ..+   +..+|..+|.
T Consensus        17 d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~----r~e---i~~~F~~~d~   89 (170)
T d2zkmx1          17 QLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP----RPE---IDEIFTSYHA   89 (170)
T ss_dssp             SCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC----CHH---HHTTCC----
T ss_pred             ccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC----HHH---HHHHHHHHcC
Confidence            455677777654411       1       3445778899999998 44   44444432    334   8899999999


Q ss_pred             CCCCcccHHHHHHHHHhcCCc----------chHHHHHHHHHHhcCCC----CCCcCHHHHHHHHHh
Q 008959          168 NQDGQLSFKEFSDLISAFGNQ----------VAANKKEELFKAADKNG----DGVVSVDELAALLAL  220 (547)
Q Consensus       168 d~dG~Is~~Ef~~~l~~lg~~----------~~~eel~~~F~~~D~d~----dG~Is~~Ef~~~l~~  220 (547)
                      |++|.|+.+||..+|......          .+.+.+++++..+..+.    +|.||+++|..+|..
T Consensus        90 d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S  156 (170)
T d2zkmx1          90 KAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCG  156 (170)
T ss_dssp             ----CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHS
T ss_pred             CCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcC
Confidence            999999999999999875432          45677899999998765    489999999998854

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=97.79  E-value=1.1e-05  Score=65.06  Aligned_cols=61  Identities=21%  Similarity=0.300  Sum_probs=47.6

Q ss_pred             HHHHHHhh-CCCCC-chh----HHHHhhhcCC----CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLL-DPSSS-NKI----VGKISLSCSV----EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~-D~d~d-G~I----l~~ll~~l~~----~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +.++|..| |.||+ |.|    +..++..+..    ...++.+   ++.+|+.+|.|+||.|+|+||..++..+
T Consensus        11 l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~---~~~~~~~~D~d~dG~Idf~EF~~lm~~l   81 (93)
T d1zfsa1          11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADA---VDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHH---HHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHH---HHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            78899887 88875 888    6666655432    2334444   8999999999999999999999998653

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=97.77  E-value=2.7e-05  Score=62.94  Aligned_cols=66  Identities=18%  Similarity=0.206  Sum_probs=52.8

Q ss_pred             HHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-----cCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVD-YNQD-GQLSFKEFSDLISA-----FGNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D-~d~d-G~Is~~Ef~~~l~~-----lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+|..+. .+|+ ++|+..||..++..     ++....++.++++|+.+|.|+||.|+|+||..++..+
T Consensus         9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l   81 (95)
T d1qlsa_           9 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   81 (95)
T ss_dssp             HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            34666777664 4565 67999999999976     3334566789999999999999999999999999765

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=97.76  E-value=1.2e-05  Score=65.52  Aligned_cols=61  Identities=16%  Similarity=0.177  Sum_probs=47.5

Q ss_pred             HHHHHHhh-CCCCC-chh----HHHHhhhcCCC-CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLL-DPSSS-NKI----VGKISLSCSVE-DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~-D~d~d-G~I----l~~ll~~l~~~-~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|+.| |.||+ |.|    +..++...... .++...   ++.+++.+|.|+||.|+|+||..++..+
T Consensus        16 l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~---v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          16 VVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGS---LDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             HHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSC---HHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHH---HHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            78888887 78875 998    66777654321 234444   8899999999999999999999998754

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.75  E-value=1.3e-05  Score=49.76  Aligned_cols=31  Identities=29%  Similarity=0.563  Sum_probs=18.5

Q ss_pred             hHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          190 AANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       190 ~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      +++++.++|+.||+|.||+|+.+||..+++.
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~   32 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEILRA   32 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHHHh
Confidence            3455666666666666666666666665543

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=1.5e-05  Score=65.11  Aligned_cols=58  Identities=12%  Similarity=0.188  Sum_probs=48.1

Q ss_pred             HHHHHHHhhCCCCCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          121 ADSEVFDLLDPSSSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       121 el~~~F~~~D~d~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      ..+++|+.+|.|++|.|    +..++...+   .+.++   +..+|+.+|.|++|.|+++||..+|.-
T Consensus        12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~---L~~~~---L~~i~~~~D~d~dG~L~~~EF~~am~L   73 (99)
T d1qjta_          12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG---LPDLI---LGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS---SCHHH---HHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcccHHHHHHHHHHcC---CcHHH---HHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence            37889999999999999    555555443   45555   999999999999999999999988753

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=97.72  E-value=6.9e-06  Score=65.57  Aligned_cols=61  Identities=20%  Similarity=0.149  Sum_probs=44.5

Q ss_pred             HHHHHHhh-CCCCCchh-----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLL-DPSSSNKI-----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~I-----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|+.| |.||+|.+     +..++........+.   ..+..+++.+|.|+||.|+|+||..++..+
T Consensus        12 ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~---~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l   78 (87)
T d1xk4a1          12 IIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRK---KGADVWFKELDINTDGAVNFQEFLILVIKM   78 (87)
T ss_dssp             HHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHT---TCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccch---HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            67778777 99999876     445544322111222   338899999999999999999999999753

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.71  E-value=1e-05  Score=63.10  Aligned_cols=62  Identities=18%  Similarity=0.255  Sum_probs=47.8

Q ss_pred             HHHHHHHhhCC-CC-Cchh----HHHHhhhcCC-CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          121 ADSEVFDLLDP-SS-SNKI----VGKISLSCSV-EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       121 el~~~F~~~D~-d~-dG~I----l~~ll~~l~~-~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      ++..+|..||. ++ .|.|    ++.++..+.. ...+..+   ++.+++.+|.|+||.|+|+||..++..+
T Consensus         8 ~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~---v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           8 ELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRT---LDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCC---SSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHH---HHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            38999999975 43 4788    7777776532 1333444   7889999999999999999999998764

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=97.67  E-value=3.4e-05  Score=62.18  Aligned_cols=61  Identities=16%  Similarity=0.285  Sum_probs=46.6

Q ss_pred             HHHHHHhh-CCCCCc-hh----HHHHhhhcC----CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLL-DPSSSN-KI----VGKISLSCS----VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~-D~d~dG-~I----l~~ll~~l~----~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +.++|..| |.||+| .|    +..++....    ....++.+   ++++|+.+|.|+||.|+|+||..++..+
T Consensus        11 l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~---~~~i~~~~D~n~DG~I~F~EF~~lm~~l   81 (93)
T d3c1va1          11 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAA---FQKLMSNLDSNRDNEVDFQEYCVFLSCI   81 (93)
T ss_dssp             HHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHH---HHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHH---HHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence            78899988 677765 56    666665421    22445555   8999999999999999999999998764

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=97.64  E-value=3.3e-05  Score=62.23  Aligned_cols=61  Identities=13%  Similarity=0.225  Sum_probs=47.2

Q ss_pred             HHHHHHhh-CCCCCch-h----HHHHhhhcCC----CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLL-DPSSSNK-I----VGKISLSCSV----EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~-I----l~~ll~~l~~----~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|..| |.||+|. |    +++++.....    ...++..   ++++++.+|.|+||.|+|+||..++..+
T Consensus        11 i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~---~~~~~~~lD~n~Dg~IdF~EF~~l~~~l   81 (93)
T d1ksoa_          11 IVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECD---YNKFMSVLDTNKDCEVDFVEYVRSLACL   81 (93)
T ss_dssp             HHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHH---HHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHH---HHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            77889887 9999994 6    6666655332    1223344   9999999999999999999999998763

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=97.62  E-value=2.5e-05  Score=62.43  Aligned_cols=60  Identities=15%  Similarity=0.288  Sum_probs=46.2

Q ss_pred             HHHHHHhh-CCCCCch-h----HHHHhhhcC--CCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLL-DPSSSNK-I----VGKISLSCS--VEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~-D~d~dG~-I----l~~ll~~l~--~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|+.| |+||+|. +    +.+++....  ....++.+   +.++++.+|.|+||.|+|+||..++..
T Consensus        11 ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~---~~~~~~~lD~d~Dg~IdF~EF~~l~~~   78 (89)
T d1k8ua_          11 LVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAE---IARLMEDLDRNKDQEVNFQEYVTFLGA   78 (89)
T ss_dssp             HHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHH---HHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHH---HHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            77889888 9999984 5    566665421  11334444   899999999999999999999999865

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=97.62  E-value=1.6e-05  Score=64.14  Aligned_cols=60  Identities=15%  Similarity=0.195  Sum_probs=45.7

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCC----CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSV----EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~----~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|..||.| +|.|    +..++.....    ...++..   ++.+|+.+|.|+||.|+|+||..++..+
T Consensus        11 l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~---v~~~~~~~D~n~DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_          11 MMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLA---VDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             HHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTH---HHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHH---HHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence            88999999987 8999    5555543211    1223444   8999999999999999999999998653

>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2 domain from protein kinase c (beta)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.57  E-value=1.9e-05  Score=67.54  Aligned_cols=49  Identities=14%  Similarity=0.169  Sum_probs=42.4

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -|.|.|+|++|+      ..+..||||++.+     +.+..||+++++++||+||+.+..
T Consensus        14 ~~~L~V~V~~a~~L~~~d~~g~~DpYv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f   73 (132)
T d1a25a_          14 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRF   73 (132)
T ss_dssp             SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEE
T ss_pred             CCEEEEEEEeeeCCCCCCCCCCcCeEEEEEEccCCCCccccEEeeecCCCCCccceEEEE
Confidence            378999999994      4667899999998     788999999999999999995544

>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin III
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.52  E-value=1.6e-05  Score=67.97  Aligned_cols=53  Identities=13%  Similarity=0.065  Sum_probs=45.2

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKLL  102 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kll  102 (547)
                      +.-.|.|+|+|++|+      ..+..|||+.+.+   +.+.+||++++++++|+|||.+...
T Consensus        14 ~~~~~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~~P~wne~f~f~   75 (130)
T d1dqva1          14 LYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFS   75 (130)
T ss_dssp             CSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEE
T ss_pred             ECCCCEEEEEEEeeeCCccccCCCCcceEEEEEEccCCCceEeceeEcCCCCeeeeeEEEEE
Confidence            567789999999995      3667899999998   6778999999999999999965543

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=97.52  E-value=0.00012  Score=58.92  Aligned_cols=66  Identities=20%  Similarity=0.262  Sum_probs=50.0

Q ss_pred             HHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-c----CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Q 008959          156 SFARRILSIVD-YNQD-GQLSFKEFSDLISA-F----GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQ  221 (547)
Q Consensus       156 ~~l~~~f~~~D-~d~d-G~Is~~Ef~~~l~~-l----g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l  221 (547)
                      ..+..+|..+. .+|+ ++++..||..++.. +    +...+++.++++++.+|.|+||.|+|+||..++..+
T Consensus         9 ~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (94)
T d1j55a_           9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (94)
T ss_dssp             HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            34667787764 4444 58999999999987 3    334456679999999999999999999999999664

>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.48  E-value=1.7e-05  Score=67.94  Aligned_cols=47  Identities=19%  Similarity=0.228  Sum_probs=37.3

Q ss_pred             EEEEEEeecc-c-------ccCCceEEEEEc-----ccceEeeeecCCC-CCCCchhhHHH
Q 008959           55 IALLTLISAE-M-------KFKDKWLACVSL-----GEQTCRTAISDNT-DKPIWNSEKKL  101 (547)
Q Consensus        55 i~~i~~~~A~-~-------~~~dd~~~~v~~-----g~~~frT~vi~~t-LnP~Wne~~kl  101 (547)
                      .|+|+|++|+ +       +++.|||+.+.+     +.+.+||++++++ +||.||+.+..
T Consensus         5 ~l~V~Vi~a~~L~~~~~~~~~~~DPyV~v~l~g~~~~~~~~~T~~v~~~~~nP~wne~f~f   65 (131)
T d1qasa2           5 RLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEF   65 (131)
T ss_dssp             EEEEEEEEEESCCCCC-----CCCEEEEEEEESSTTTCEEEECCCCSSCSSSCEEEEEEEE
T ss_pred             EEEEEEEEeeCCCCCCCCCCCCcCeEEEEEEccCCCCcEEEEEEEEecccCCceEEEEEEE
Confidence            6899999995 2       456899999987     5789999988655 89999996544

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.46  E-value=4.8e-05  Score=47.17  Aligned_cols=28  Identities=25%  Similarity=0.468  Sum_probs=26.1

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +.+.|++||+|+||+|+.+||..++...
T Consensus         6 Lae~FRifDkNaDGyiD~eEl~~ilr~t   33 (34)
T d1ctda_           6 LANAFRIFDKNADGYIDIEELGEILRAT   33 (34)
T ss_dssp             HHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCcccccHHHHHHHHHhc
Confidence            8999999999999999999999998753

>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Unc-13 homolog A
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.44  E-value=2.4e-05  Score=66.99  Aligned_cols=50  Identities=10%  Similarity=0.151  Sum_probs=42.2

Q ss_pred             eeEEEEEEeeccc---ccCCceEEEEEcccceEeeeecCCCCCCCchhhHHHHH
Q 008959           53 AGIALLTLISAEM---KFKDKWLACVSLGEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        53 ~gi~~i~~~~A~~---~~~dd~~~~v~~g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      |++|.|+|.+|+-   ..+.||||++++|++..+|.+.+ +.||+||+.+...+
T Consensus         1 ~~~L~V~v~~a~~l~~~~~~dpYv~l~~~~~k~~T~~~k-~~nP~Wne~f~f~v   53 (128)
T d2cjta1           1 MSLLCVGVKKAKFDGAQEKFNTYVTLKVQNVKSTTIAVR-GSQPSWEQDFMFEI   53 (128)
T ss_dssp             CEEEEEEEEEEECSSCGGGCEEEEEEEETTEEEECCCEE-SSSCEEEEEEEEEE
T ss_pred             CeEEEEEEEEEECCCCCCCcCeEEEEEeCCEEEEEEEec-CCCCeEEEEEEEee
Confidence            6899999999962   55678999999999999999887 45999999666555

>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin XIII
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=5.2e-05  Score=65.35  Aligned_cols=58  Identities=17%  Similarity=0.118  Sum_probs=46.3

Q ss_pred             ccccccceeEEEEEEeecc---cccCCceEEEEEc----ccceEeeeecCCCCCCCchhhHHHHH
Q 008959           46 VLNEEDFAGIALLTLISAE---MKFKDKWLACVSL----GEQTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        46 ~~~~~~~~gi~~i~~~~A~---~~~~dd~~~~v~~----g~~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      ++.-+.-.+.|.|+|++|+   ..+..||||.+.+    +...+||++.+++++|+||+.+..-+
T Consensus        18 sl~y~~~~~~L~V~v~~a~~L~~~g~~dpyVkv~l~~~~~~~~~kT~v~~~~~~P~wne~f~f~v   82 (138)
T d1wfma_          18 CLDYDCQKAELFVTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPL   82 (138)
T ss_dssp             EEEEETTTTEEEEEEEEEECCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEEC
T ss_pred             EEEECCCCCEEEEEEEEcCCCCCCCCcCcEEEEEECCCCCccceeeeEECCCCCceEeeeEEEEe
Confidence            3444667799999999995   4677899999988    44568999999999999999655433

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=97.33  E-value=3.9e-05  Score=62.64  Aligned_cols=60  Identities=17%  Similarity=0.216  Sum_probs=44.0

Q ss_pred             HHHHHHhhCCCCCchh----HHHHhhhcCCC------CCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLLDPSSSNKI----VGKISLSCSVE------DPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~D~d~dG~I----l~~ll~~l~~~------~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|+.|| +++|.|    +.+++......      ..++..   +..+|+.+|.|+||.|+|+||..++..+
T Consensus        12 l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~---v~~~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_          12 MIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNY---LADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCG---GGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHH---HHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            667777876 788998    66666543210      112222   7889999999999999999999998753

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=97.32  E-value=0.00018  Score=57.02  Aligned_cols=60  Identities=18%  Similarity=0.205  Sum_probs=44.4

Q ss_pred             HHHHHHhh-CCCCCc-hh----HHHHhhhcCC----CCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLL-DPSSSN-KI----VGKISLSCSV----EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~-D~d~dG-~I----l~~ll~~l~~----~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..| +.+|++ ++    +++++.....    ...++..   +.++++.+|.|+||.|+|+||..++..
T Consensus        10 li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~---v~~~~~~lD~n~Dg~idF~EF~~li~~   79 (87)
T d1e8aa_          10 IVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAV---IDEIFQGLDANQDEQVDFQEFISLVAI   79 (87)
T ss_dssp             HHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHH---HHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHH---HHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            77888887 556665 46    6666654221    1233444   999999999999999999999999865

>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin IV
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=8.1e-05  Score=64.08  Aligned_cols=57  Identities=9%  Similarity=0.058  Sum_probs=46.0

Q ss_pred             cccccccceeEEEEEEeecc------c-ccCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHH
Q 008959           45 RVLNEEDFAGIALLTLISAE------M-KFKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        45 ~~~~~~~~~gi~~i~~~~A~------~-~~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      -++.-+.-.+.|+|+|++|+      . +...||||.+.+   +.+.+||+++++++||.|||.+..
T Consensus        13 ~sl~Y~~~~~~L~V~V~~a~~L~~~d~~~~~~dpyV~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f   79 (138)
T d1ugka_          13 FSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTF   79 (138)
T ss_dssp             EEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEE
T ss_pred             EEEEEeCCCCEEEEEEEEecCCCCCCCCCCccceEEEEEEcCCCCEeEeCeeEeCCCCCceeeEEEE
Confidence            34444666789999999994      1 334689999998   788999999999999999996554

>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptogamin I
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.28  E-value=6.7e-05  Score=64.94  Aligned_cols=52  Identities=19%  Similarity=0.179  Sum_probs=44.2

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc---ccceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL---GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~---g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.+.|+|+|++|+      ..+..||||.+.+   +.+.+||++++++++|+||+.+..
T Consensus        30 ~~~~~~L~V~V~~a~~L~~~~~~g~~dpyV~v~l~~~~~~~~kT~~~~~t~~P~wne~f~f   90 (143)
T d1rsya_          30 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTF   90 (143)
T ss_dssp             ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEE
T ss_pred             eCCCCEEEEEEEEccCCCCCCCCCCCCeEEEEEEcCCCCeeEEEEEeccccCcceeeeeEE
Confidence            455678999999995      3677899999998   788999999999999999995543

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=97.24  E-value=0.00088  Score=52.35  Aligned_cols=65  Identities=20%  Similarity=0.253  Sum_probs=50.8

Q ss_pred             HHHHHHHHhhcC-CCC-CcccHHHHHHHHHh-cCC----c-chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          156 SFARRILSIVDY-NQD-GQLSFKEFSDLISA-FGN----Q-VAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       156 ~~l~~~f~~~D~-d~d-G~Is~~Ef~~~l~~-lg~----~-~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      ..+..+|..+.. +|+ ++++..||..++.. ++.    . ..+..++++++.+|.|+||.|+|+||..++..
T Consensus        10 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   82 (83)
T d1xk4c1          10 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR   82 (83)
T ss_dssp             HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence            346677877753 343 68999999999987 443    2 24456899999999999999999999998854

>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Piccolo
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.16  E-value=1.6e-05  Score=68.67  Aligned_cols=48  Identities=21%  Similarity=0.224  Sum_probs=40.9

Q ss_pred             eeEEEEEEeecc------cccCCceEEEEEc--------------ccceEeeeecCCCCCCCchhhHH
Q 008959           53 AGIALLTLISAE------MKFKDKWLACVSL--------------GEQTCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        53 ~gi~~i~~~~A~------~~~~dd~~~~v~~--------------g~~~frT~vi~~tLnP~Wne~~k  100 (547)
                      .|.|.|+|++|+      ..+..||||++.+              +++..||+++++++||+|||.+.
T Consensus        17 ~~~L~V~V~~A~~L~~~d~~g~~DpyV~v~l~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~   84 (142)
T d1rh8a_          17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVI   84 (142)
T ss_dssp             TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEE
T ss_pred             CCEEEEEEEEeECCCCcCCCCCCCcCEEEEEecCcccccccccCCCceeeeccCCcCCCCceeEEEEE
Confidence            699999999995      4667899999987              45668999999999999999544

>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Regulating synaptic membrane exocytosis protein, rim2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0002  Score=60.32  Aligned_cols=51  Identities=16%  Similarity=0.188  Sum_probs=42.9

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~k  100 (547)
                      +...+.|.|+|++|+      .+...|||+++.+     +.+..||++++++++|.|||.+.
T Consensus        10 ~~~~~~L~V~V~~a~~L~~~~~~~~~dpyVkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~   71 (125)
T d2bwqa1          10 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFI   71 (125)
T ss_dssp             ETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEE
T ss_pred             ECCCCEEEEEEEEeECCCCcCCCCCCCEEEEEEEeCCCCCccccccCEEcCCCCCEEccEEE
Confidence            555678999999995      4677889999987     56779999999999999999544

>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin IV
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.97  E-value=6.2e-05  Score=64.76  Aligned_cols=52  Identities=12%  Similarity=0.073  Sum_probs=40.1

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.|.|.|+|++|+      .....|||+.+.+     .....||++.+++.+|.|||.+..
T Consensus        11 ~~~~~~L~V~v~~a~~L~~~~~~~~~dpyvkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F   73 (138)
T d1w15a_          11 QSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVF   73 (138)
T ss_dssp             ETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEE
T ss_pred             cCCCCEEEEEEEEeECCCCCCCCCCcCEEEEEEEeCCcccCccccceeECCCCCCeECcEEEE
Confidence            455678999999994      3667789999987     334678999999999999996543

>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2b-domain of rabphilin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.94  E-value=0.00022  Score=60.81  Aligned_cols=52  Identities=17%  Similarity=0.102  Sum_probs=42.9

Q ss_pred             ccceeEEEEEEeecc------cccCCceEEEEEc-----ccceEeeeecCCCCCCCchhhHHH
Q 008959           50 EDFAGIALLTLISAE------MKFKDKWLACVSL-----GEQTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        50 ~~~~gi~~i~~~~A~------~~~~dd~~~~v~~-----g~~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      +.-.|.|.|+|++|+      ..+..|||+.+.+     ....+||++.+++.+|.|||.+..
T Consensus        11 ~~~~~~L~V~v~~a~nL~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f   73 (137)
T d2cm5a1          11 STQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFY   73 (137)
T ss_dssp             ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEE
T ss_pred             ECCCCEEEEEEEEEECCCCCCCCCCcCeEEEEEEEcCCccceeecCEeEcCCCCCccceEEEE
Confidence            456789999999994      4678899999986     556789999999999999995544

>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin III
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.81  E-value=0.00028  Score=60.94  Aligned_cols=54  Identities=26%  Similarity=0.196  Sum_probs=43.8

Q ss_pred             cccccceeEEEEEEeecc------cccCCceEEEEEcccc-----eEeeeecCCCCCCCchhhHH
Q 008959           47 LNEEDFAGIALLTLISAE------MKFKDKWLACVSLGEQ-----TCRTAISDNTDKPIWNSEKK  100 (547)
Q Consensus        47 ~~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~~-----~frT~vi~~tLnP~Wne~~k  100 (547)
                      ++=++..|.|.|+|++|+      ..++.||||.+.+...     ..||++++++++|+||+.+.
T Consensus        13 l~Y~~~~~~L~V~V~~a~nL~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~~~~~t~~P~wne~f~   77 (145)
T d1dqva2          13 LCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALV   77 (145)
T ss_dssp             EEEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCC
T ss_pred             EEEcCCCCEEEEEEEEEeCCCCcCCCCCcCceEEEEEccCCccceeecCEEEeCCCCceecceEE
Confidence            333677899999999994      4667799999998543     57899999999999999543

>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from protein kinase C delta
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.74  E-value=0.00032  Score=59.18  Aligned_cols=39  Identities=15%  Similarity=0.111  Sum_probs=33.3

Q ss_pred             cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHHHH
Q 008959           65 MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKLLL  103 (547)
Q Consensus        65 ~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kll~  103 (547)
                      +++..||||.+.+.+     +..+|++.++|+||+|||.+...+
T Consensus        20 ~~~~~dPY~~v~l~~~~~~~~~~~t~~~kkT~nP~WnE~F~~~v   63 (123)
T d1bdya_          20 EDDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHI   63 (123)
T ss_dssp             CCCSCCCEEEEEEEEECCGGGTTBEEECSCCBCCCTTCEEEEEC
T ss_pred             CCCCCCCEEEEEEcCccccccceEEEEeCCCCCcccceEEEEEE
Confidence            689999999999854     357899999999999999776655

>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptogamin I
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.53  E-value=0.00057  Score=59.87  Aligned_cols=55  Identities=20%  Similarity=0.186  Sum_probs=43.7

Q ss_pred             cccccceeEEEEEEeecc------cccCCceEEEEEccc-----ceEeeeecCCCCCCCchhhHHH
Q 008959           47 LNEEDFAGIALLTLISAE------MKFKDKWLACVSLGE-----QTCRTAISDNTDKPIWNSEKKL  101 (547)
Q Consensus        47 ~~~~~~~gi~~i~~~~A~------~~~~dd~~~~v~~g~-----~~frT~vi~~tLnP~Wne~~kl  101 (547)
                      ++-+...|.|.|+|++|+      ...+.||||++.+..     ...||++.++++||+||+.+..
T Consensus        18 l~Y~~~~~~L~V~V~~a~~L~~~~~~~~~dpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~F   83 (157)
T d1uowa_          18 LRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSF   83 (157)
T ss_dssp             EEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEE
T ss_pred             EEEcCCCCEEEEEEEEEEEcccccCCCCCCeeEEEEEecCCccccceecccccCCCCcccCCeEEE
Confidence            333667899999999994      467889999998743     3458999999999999995543

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.0044  Score=51.52  Aligned_cols=67  Identities=13%  Similarity=0.323  Sum_probs=50.6

Q ss_pred             HHHHHHhhc---CCCCCcccHHHHHHHHHhcCC-c-chHHHHHHHHHHhcCCCC--------CCcCHHHHHHHHHhhhcc
Q 008959          158 ARRILSIVD---YNQDGQLSFKEFSDLISAFGN-Q-VAANKKEELFKAADKNGD--------GVVSVDELAALLALQQEK  224 (547)
Q Consensus       158 l~~~f~~~D---~d~dG~Is~~Ef~~~l~~lg~-~-~~~eel~~~F~~~D~d~d--------G~Is~~Ef~~~l~~l~~~  224 (547)
                      |.+.|+...   .+.+|.|+.++|..++..+.. . .+..-++.+|+.||.|+|        |.|++.||+..|.-+-..
T Consensus        30 l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~LS~l~~G  109 (118)
T d1tuza_          30 VLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEGG  109 (118)
T ss_dssp             HHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHHSC
T ss_pred             HHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHHHHHHHcCC
Confidence            555554322   246799999999999987433 2 345678999999999977        899999999999776443

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=96.43  E-value=0.0033  Score=49.76  Aligned_cols=61  Identities=16%  Similarity=0.299  Sum_probs=42.8

Q ss_pred             HHHHHHhh-CCCCCc-hh----HHHHhhh-c---CCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLL-DPSSSN-KI----VGKISLS-C---SVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~-D~d~dG-~I----l~~ll~~-l---~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|..| ..+|+. .+    +++++.. +   ......+..   +.++|+.+|.|+||.|+|+||..++..+
T Consensus        11 ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~---~d~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (90)
T d3cr5x1          11 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEV---VDKVMETLDSDGDGECDFQEFMAFVAMI   81 (90)
T ss_dssp             HHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHH---HHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHH---HHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            67788877 455654 34    6666654 1   111222333   8999999999999999999999988653

>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0019  Score=54.17  Aligned_cols=43  Identities=28%  Similarity=0.442  Sum_probs=33.7

Q ss_pred             EEEEEeeccc--ccCCceEEEEEc------ccceEeeeec--CCCCCCCchhh
Q 008959           56 ALLTLISAEM--KFKDKWLACVSL------GEQTCRTAIS--DNTDKPIWNSE   98 (547)
Q Consensus        56 ~~i~~~~A~~--~~~dd~~~~v~~------g~~~frT~vi--~~tLnP~Wne~   98 (547)
                      |+|+|++|+.  ..+.+||+.+.+      ..+.++|++.  ++++||+||+.
T Consensus         3 l~V~Visaq~L~~~~~dPyV~V~l~g~~~D~~~~~~t~~~~~~n~~nP~wne~   55 (122)
T d2zkmx2           3 LSITVISGQFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEE   55 (122)
T ss_dssp             EEEEEEEEESCCSSCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCC
T ss_pred             EEEEEEEeeCCCCCCCCcEEEEEEECcCCCCCccEEEEEEEeCCeecceEccc
Confidence            7899999974  667789999987      3456666653  67899999983

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=95.74  E-value=0.0061  Score=48.62  Aligned_cols=60  Identities=25%  Similarity=0.331  Sum_probs=41.4

Q ss_pred             HHHHHHhh-CCCCCc-hh----HHHHhhh-----cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhc
Q 008959          122 DSEVFDLL-DPSSSN-KI----VGKISLS-----CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAF  185 (547)
Q Consensus       122 l~~~F~~~-D~d~dG-~I----l~~ll~~-----l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~l  185 (547)
                      +..+|..| ..+|+. ++    +++++..     +.. ...+..   +.++++.+|.|+||.|+|+||..++..+
T Consensus        11 ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~-~~d~~~---vd~im~~LD~n~Dg~vdF~EF~~li~~l   81 (95)
T d1qlsa_          11 LIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQN-QKDPGV---LDRMMKKLDLDSDGQLDFQEFLNLIGGL   81 (95)
T ss_dssp             HHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHH-CCCTHH---HHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcC-CCCHHH---HHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            66788776 445653 34    5555443     221 122333   8999999999999999999999998653

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=95.52  E-value=0.0084  Score=47.69  Aligned_cols=63  Identities=21%  Similarity=0.236  Sum_probs=40.5

Q ss_pred             HHHHHHhhC-CCCCc-hh----HHHHhhh-cCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSSN-KI----VGKISLS-CSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~dG-~I----l~~ll~~-l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..|. .+|+. ++    +++++.. +..--........+..+++.+|.|+||.|+|+||..++..
T Consensus        11 ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   80 (94)
T d1j55a_          11 IIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA   80 (94)
T ss_dssp             HHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            677888874 45543 34    6666543 1100011122233899999999999999999999999865

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.0034  Score=54.28  Aligned_cols=60  Identities=22%  Similarity=0.332  Sum_probs=48.9

Q ss_pred             HHHHHHhhcCC-CCCcccHHHHHHHHHhcCCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Q 008959          158 ARRILSIVDYN-QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDELAALLA  219 (547)
Q Consensus       158 l~~~f~~~D~d-~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~  219 (547)
                      +.-.|..+|.| .||.|+..|+..+...+  ...+.-++..|+..|.|+||.||+.|+...+.
T Consensus        79 v~W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~  139 (151)
T d1sraa_          79 VHWQFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCFG  139 (151)
T ss_dssp             HHHHHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred             ceeehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence            55679999999 59999999988865322  23445588899999999999999999998873

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=94.91  E-value=0.017  Score=44.67  Aligned_cols=63  Identities=19%  Similarity=0.202  Sum_probs=40.6

Q ss_pred             HHHHHHhhC-CCCC-chh----HHHHhhh-cCCCC-CChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q 008959          122 DSEVFDLLD-PSSS-NKI----VGKISLS-CSVED-PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA  184 (547)
Q Consensus       122 l~~~F~~~D-~d~d-G~I----l~~ll~~-l~~~~-~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~  184 (547)
                      +..+|..|. .+|+ +.+    +++++.. +..-- ....+...+..+++.+|.|+||.|+|+||..++..
T Consensus        12 ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   82 (83)
T d1xk4c1          12 IINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR   82 (83)
T ss_dssp             HHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence            677888774 3443 233    5665543 11100 11112234889999999999999999999998754

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.51  E-value=0.21  Score=38.95  Aligned_cols=62  Identities=10%  Similarity=0.086  Sum_probs=50.8

Q ss_pred             HHHHHHhhcCCCCCcccHHHHHHHHHh-cCC-cchHHHHHHHHHHhcCCC----CCCcCHHHHHHHHHh
Q 008959          158 ARRILSIVDYNQDGQLSFKEFSDLISA-FGN-QVAANKKEELFKAADKNG----DGVVSVDELAALLAL  220 (547)
Q Consensus       158 l~~~f~~~D~d~dG~Is~~Ef~~~l~~-lg~-~~~~eel~~~F~~~D~d~----dG~Is~~Ef~~~l~~  220 (547)
                      +..+|..+-.+ .+.|+.++|...|.. .+. ..+.+.+.++|..+..+.    .+.+|++.|..+|..
T Consensus        10 i~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S   77 (94)
T d1qasa1          10 IDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS   77 (94)
T ss_dssp             HHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred             HHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence            88899888654 468999999999988 443 467888999999998764    478999999999954

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.24  E-value=0.039  Score=45.50  Aligned_cols=51  Identities=6%  Similarity=0.046  Sum_probs=35.2

Q ss_pred             CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCC--------CcccHHHHHHHHHhc
Q 008959          133 SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQD--------GQLSFKEFSDLISAF  185 (547)
Q Consensus       133 ~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~d--------G~Is~~Ef~~~l~~l  185 (547)
                      .+|.|    |..++.....  .......+++.+|+.||.|++        |.|++.||..+|.-+
T Consensus        44 p~g~i~~~~F~~~~~~~f~--~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~LS~l  106 (118)
T d1tuza_          44 QGDAIGYEGFQQFLKIYLE--VDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLL  106 (118)
T ss_dssp             ETTEECHHHHHHHHHHHTT--CSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHH
T ss_pred             cccccCHHHHHHHHHHhCC--CCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHHHHHHH
Confidence            45556    5555544322  111123458999999999976        899999999999765

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.22  Score=42.44  Aligned_cols=56  Identities=16%  Similarity=0.271  Sum_probs=40.9

Q ss_pred             HHHHHHhhCCC-CCchh----HHHHhhhcCCCCCChHHHHHHHHHHHhhcCCCCCcccHHHHHHHHH
Q 008959          122 DSEVFDLLDPS-SSNKI----VGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS  183 (547)
Q Consensus       122 l~~~F~~~D~d-~dG~I----l~~ll~~l~~~~~~~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~  183 (547)
                      +.=.|..+|.| .||.+    +..+...+   .+.+.-   ++..|+.+|.|+||.|++.||..-+.
T Consensus        79 v~W~F~~LD~n~~D~~L~~~EL~~l~~~L---~~~e~C---~~~F~~~CD~n~D~~Is~~EW~~Cf~  139 (151)
T d1sraa_          79 VHWQFGQLDQHPIDGYLSHTELAPLRAPL---IPMEHC---TTRFFETCDLDNDKYIALDEWAGCFG  139 (151)
T ss_dssp             HHHHHHHHCCTTCSSEECTTTTGGGGSTT---STTGGG---HHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred             ceeehhhcCCCCCCCccCHHHHHHHHHhh---cCCchH---HHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence            44579999999 58988    33333222   223333   67889999999999999999998764

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=87.73  E-value=1.7  Score=30.91  Aligned_cols=70  Identities=21%  Similarity=0.334  Sum_probs=55.0

Q ss_pred             hHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHhcCCcchHHHHHHHHHHh-cCCCC-CCcCHHHHHHHHHhh
Q 008959          152 ETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAA-DKNGD-GVVSVDELAALLALQ  221 (547)
Q Consensus       152 ~~e~~~l~~~f~~~D~d~dG~Is~~Ef~~~l~~lg~~~~~eel~~~F~~~-D~d~d-G~Is~~Ef~~~l~~l  221 (547)
                      .++.++.-.+|..||.|...--...+-.+++..+|...+..+-+.+++.. ...+| ..|..+|+..+..+.
T Consensus        10 peekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcskw   81 (86)
T d1j7qa_          10 PEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKW   81 (86)
T ss_dssp             STHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHH
Confidence            34555588999999999998888999999999999999888888888775 33343 348888888776553

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=87.48  E-value=0.59  Score=33.10  Aligned_cols=51  Identities=18%  Similarity=0.288  Sum_probs=40.3

Q ss_pred             cCCCCCcccHHHHHHHHHh-cCCc-chHHHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Q 008959          166 DYNQDGQLSFKEFSDLISA-FGNQ-VAANKKEELFKAADKNGDGVVSVDELAALLAL  220 (547)
Q Consensus       166 D~d~dG~Is~~Ef~~~l~~-lg~~-~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~  220 (547)
                      |.|+||.|+..++..+... ++.. +++.    .+...|.|+||.|+..++..+.+.
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~----~~~aaDvn~Dg~i~i~D~~~l~~~   54 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAITLTDD----AKARADVDKNGSINAADVLLLSRY   54 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCCHH----HHHHHCTTCSSCCSHHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCCCChh----hhhccccCCCCCCCHHHHHHHHHH
Confidence            7899999999999998876 4433 3333    356799999999999999887754

>d1gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Barrel-sandwich hybrid
superfamily: Duplicated hybrid motif
family: Glucose permease-like
domain: Glucose permease IIa domain, IIa-glc
species: Bacillus subtilis [TaxId: 1423]

Probab=85.08  E-value=0.34  Score=41.64  Aligned_cols=54  Identities=30%  Similarity=0.456  Sum_probs=35.3

Q ss_pred             CCCceeeecCCceeeeeeecCCCceEEEcCcccccccccCCCcccCCcCCCeEEEEEeCCCCceeeecCcCeEEeEE
Q 008959          411 EREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQF  487 (547)
Q Consensus       411 ~~~~~~vsPaDg~~~~~~~i~~~~~~~iKg~~ysl~~lL~~~~~a~~f~~G~~~~~~Lsp~dYHr~h~P~~G~v~~~  487 (547)
                      -+..+++||++|++....++.+.        -|| ..+||+         | +++.   |.+ +...||++|+|..+
T Consensus         7 ~~~~~i~aP~~G~vi~L~~V~D~--------vFs-~~~~G~---------G-~aI~---P~~-~~v~AP~~G~I~~i   60 (158)
T d1gpra_           7 IGEEVFVSPITGEIHPITDVPDQ--------VFS-GKMMGD---------G-FAIL---PSE-GIVVSPVRGKILNV   60 (158)
T ss_dssp             TSCBCCBCSSSEEEEEGGGSSSH--------HHH-TTSSCE---------E-EEEE---ESS-CEEECSSSEEEEEE
T ss_pred             cCCEEEEecCCcEEEEhhhCCCh--------Hhc-cCCccc---------e-EEEE---EcC-CEEEEeeCeEEEEE
Confidence            34567899999999998877642        111 123332         2 3332   555 57899999999654

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=80.28  E-value=0.23  Score=36.75  Aligned_cols=52  Identities=25%  Similarity=0.282  Sum_probs=39.2

Q ss_pred             cCCCCCcccHHHHHHHHHhc-CCcchHHHHHHHHHHhcCCCCCCcCHHHHHHHHHhhh
Q 008959          166 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDELAALLALQQ  222 (547)
Q Consensus       166 D~d~dG~Is~~Ef~~~l~~l-g~~~~~eel~~~F~~~D~d~dG~Is~~Ef~~~l~~l~  222 (547)
                      |.|+||.|+..++..++..+ +... ..+    +..+|.|+||.|+..++..+.+.+-
T Consensus         8 DvN~DG~Vd~~D~~~~~~~i~~~~~-~~~----~~~aDvn~DG~Id~~D~~~l~~~il   60 (71)
T d1dava_           8 DVNDDGKVNSTDAVALKRYVLRSGI-SIN----TDNADLNEDGRVNSTDLGILKRYIL   60 (71)
T ss_dssp             CSSSSSBSSGGGHHHHHHHHHCSCS-CCC----GGGTCSSSSSSCSSHHHHHHHHHTT
T ss_pred             ccCCCCCCcHHHHHHHHHHHcCCCC-cCC----CcceecCCCCCcCHHHHHHHHHHHH
Confidence            78999999999998888773 4321 111    1247999999999999988887653