Citrus Sinensis ID: 009035
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 546 | 2.2.26 [Sep-21-2011] | |||||||
| Q8S528 | 534 | Aldehyde dehydrogenase fa | yes | no | 0.924 | 0.945 | 0.803 | 0.0 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 0.983 | 0.998 | 0.744 | 0.0 | |
| P20000 | 520 | Aldehyde dehydrogenase, m | yes | no | 0.904 | 0.95 | 0.594 | 1e-172 | |
| Q2XQV4 | 521 | Aldehyde dehydrogenase, m | yes | no | 0.877 | 0.919 | 0.608 | 1e-171 | |
| P11884 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.904 | 0.951 | 0.590 | 1e-170 | |
| P81178 | 500 | Aldehyde dehydrogenase, m | N/A | no | 0.897 | 0.98 | 0.597 | 1e-170 | |
| P47738 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.904 | 0.951 | 0.592 | 1e-170 | |
| P05091 | 517 | Aldehyde dehydrogenase, m | yes | no | 0.935 | 0.988 | 0.576 | 1e-169 | |
| Q5RF00 | 517 | Aldehyde dehydrogenase, m | yes | no | 0.935 | 0.988 | 0.574 | 1e-169 | |
| Q66HF8 | 519 | Aldehyde dehydrogenase X, | no | no | 0.904 | 0.951 | 0.578 | 1e-169 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/505 (80%), Positives = 457/505 (90%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G S+ AAA E+ ITPPVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI V+EG+
Sbjct: 30 GAQRYSNLAAAVENTITPPVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGD 89
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
AEDVNRAV+AARKAFDEGPWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQ
Sbjct: 90 AEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQ 149
Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221
SAQ EVPM R+FRYYAGWADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +
Sbjct: 150 SAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLS 209
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 281
WK+GPALACGNT+VLKTAEQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM
Sbjct: 210 WKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHM 269
Query: 282 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
+VDK+AFTGST GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFF
Sbjct: 270 DVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFF 329
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
NQGQCCCAGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKY
Sbjct: 330 NQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKY 389
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461
I+ GV+ GA L+ GG+RLG+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEV
Sbjct: 390 IKHGVEAGATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEV 449
Query: 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 521
I R+N S+YGLAAGVFT NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GRE
Sbjct: 450 IARANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGRE 509
Query: 522 KGSYSLSNYLQVKAVVTALKNPAWL 546
KG YSL+NYLQVKAVVT+LKNPAWL
Sbjct: 510 KGIYSLNNYLQVKAVVTSLKNPAWL 534
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/547 (74%), Positives = 473/547 (86%), Gaps = 10/547 (1%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MAARR+ LLSRSF++SSP LF S+GR+ C +++AAAE+ I P
Sbjct: 1 MAARRVSSLLSRSFSASSPLLFRSQGRN---CYNGGI------LRRFGTSSAAAEEIINP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct: 52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAG
Sbjct: 112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++
Sbjct: 352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQI 411
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+DEVI+R+N ++YGLAAGVFT
Sbjct: 412 GDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTK 471
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539
NLDTAN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+NYLQ+KAVVTA
Sbjct: 472 NLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTA 531
Query: 540 LKNPAWL 546
L PAW+
Sbjct: 532 LNKPAWI 538
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 604 bits (1558), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/496 (59%), Positives = 362/496 (72%), Gaps = 2/496 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G S+A A P P +V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+
Sbjct: 17 GRRLLSAATQAVPTPNQQP-EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGD 75
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR AF G PW RM A ER +++ R ADL+ER +AALET DNGKP+
Sbjct: 76 KADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYI 135
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
S ++ M + RYYAGWADK G T P DG Y T HEP+GV GQIIPWNFPLLM
Sbjct: 136 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQ 195
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH
Sbjct: 196 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASH 255
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
+VDK+AFTGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALF
Sbjct: 256 EDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 315
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+L
Sbjct: 316 FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLG 375
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460
YI+SG + GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++E
Sbjct: 376 YIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEE 435
Query: 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 520
V+ R+N S+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GR
Sbjct: 436 VVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGR 495
Query: 521 EKGSYSLSNYLQVKAV 536
E G Y L Y +VK V
Sbjct: 496 ELGEYGLQAYTEVKTV 511
|
Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 603 bits (1555), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/480 (60%), Positives = 357/480 (74%), Gaps = 1/480 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF G P
Sbjct: 37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S+YGLAA VFT +
Sbjct: 397 DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKD 456
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 457 LDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVTVKV 516
|
Is capable of converting retinaldehyde to retinoic acid. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 598 bits (1541), Expect = e-170, Method: Compositional matrix adjust.
Identities = 293/496 (59%), Positives = 361/496 (72%), Gaps = 2/496 (0%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+++A +A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV
Sbjct: 20 SAAATSAVPAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGNKEDV 78
Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++AV AA+ AF G PW RM A +R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 79 DKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYL 138
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
++ M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+
Sbjct: 139 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 198
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VD
Sbjct: 199 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 258
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
K+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQG
Sbjct: 259 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 318
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
QCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+S
Sbjct: 319 QCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKS 378
Query: 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464
G GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R
Sbjct: 379 GQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGR 438
Query: 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 524
+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G
Sbjct: 439 ANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGE 498
Query: 525 YSLSNYLQVKAVVTAL 540
Y L Y +VK V +
Sbjct: 499 YGLQAYTEVKTVTVKV 514
|
Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 597 bits (1540), Expect = e-170, Method: Compositional matrix adjust.
Identities = 294/492 (59%), Positives = 360/492 (73%), Gaps = 2/492 (0%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+++A +A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV
Sbjct: 1 SAAATSAVPAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDV 59
Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++AV AAR AF G PW RM A +R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 60 DKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYL 119
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
++ M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+
Sbjct: 120 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VD
Sbjct: 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 239
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
K+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQG
Sbjct: 240 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 299
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
QCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+S
Sbjct: 300 QCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKS 359
Query: 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464
G GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R
Sbjct: 360 GQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419
Query: 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 524
+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G
Sbjct: 420 ANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGE 479
Query: 525 YSLSNYLQVKAV 536
Y L Y +VK V
Sbjct: 480 YGLQAYTEVKTV 491
|
Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 597 bits (1539), Expect = e-170, Method: Compositional matrix adjust.
Identities = 294/496 (59%), Positives = 361/496 (72%), Gaps = 2/496 (0%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+++A +A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV
Sbjct: 20 SAAATSAVPAPNHQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDV 78
Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++AV AAR AF G PW RM A +R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 79 DKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYL 138
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
++ M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+
Sbjct: 139 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 198
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH VD
Sbjct: 199 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVD 258
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
K+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQG
Sbjct: 259 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 318
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
QCCCAGSRTFV E+VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+S
Sbjct: 319 QCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKS 378
Query: 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464
G GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R
Sbjct: 379 GQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGR 438
Query: 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 524
+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G
Sbjct: 439 ANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGE 498
Query: 525 YSLSNYLQVKAVVTAL 540
Y L Y +VK V +
Sbjct: 499 YGLQAYTEVKTVTVKV 514
|
Is capable of converting retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust.
Identities = 295/512 (57%), Positives = 363/512 (70%), Gaps = 1/512 (0%)
Query: 30 LCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR 89
+ RAAA G S+AA A +V Q+ IN ++ D+ S KTFPT++P
Sbjct: 1 MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS 60
Query: 90 TGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIA 148
TG+VI VAEG+ EDV++AV AAR AF G PW RM A R +++ R ADL+ER +A
Sbjct: 61 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA 120
Query: 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG 208
ALET DNGKP+ S ++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 121 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 180
Query: 209 QIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268
QIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G
Sbjct: 181 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 240
Query: 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
+GPTAGAA+ASH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+
Sbjct: 241 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 300
Query: 329 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGP
Sbjct: 301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 360
Query: 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGP 448
Q+D QF+KIL YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGP
Sbjct: 361 QVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGP 420
Query: 449 VQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI 508
V ILK+K ++EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A
Sbjct: 421 VMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS 480
Query: 509 PFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 481 PFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5RF00|ALDH2_PONAB Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 294/512 (57%), Positives = 363/512 (70%), Gaps = 1/512 (0%)
Query: 30 LCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR 89
+ RAAA G S+AA A +V Q+ IN ++ D+ S KTFPT++P
Sbjct: 1 MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS 60
Query: 90 TGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIA 148
TG+VI VAEG+ EDV++AV AAR AF G PW RM A R +++ R ADL+ER +A
Sbjct: 61 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA 120
Query: 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG 208
ALET DNGKP+ S ++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 121 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 180
Query: 209 QIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268
QIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G
Sbjct: 181 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 240
Query: 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
+GPTAGAA+ASH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+
Sbjct: 241 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 300
Query: 329 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGP
Sbjct: 301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 360
Query: 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGP 448
Q+D QF+KIL YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGP
Sbjct: 361 QVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGP 420
Query: 449 VQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI 508
V ILK+K ++EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC++VF A
Sbjct: 421 VMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYNVFGAQS 480
Query: 509 PFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 481 PFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512
|
Is capable of converting retinaldehyde to retinoic acid. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q66HF8|AL1B1_RAT Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/496 (57%), Positives = 365/496 (73%), Gaps = 2/496 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G +T+ S AAA +PI P ++ Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 16 GRTTSYSTAAALPNPIPNP-EIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGD 74
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+ AV AAR+AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF+
Sbjct: 75 RADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQ 134
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M
Sbjct: 135 ESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQ 194
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 195 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 254
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
M+VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD+D A + H ALF
Sbjct: 255 MDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALF 314
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y +F+E+ A KR VG+PF+ QQGPQ+D EQFEKIL
Sbjct: 315 FNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILG 374
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460
YIR G GAKL GGER G +G++IKPTVF V+DDM IA++EIFGPVQ + K+K ++E
Sbjct: 375 YIRLGQKEGAKLLCGGERFGERGFFIKPTVFGNVQDDMRIAREEIFGPVQPLFKFKKIEE 434
Query: 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 520
VIQR+N ++YGLAA VFT +LD A +AL+ G+VW+N +++ PFGG+K+SG GR
Sbjct: 435 VIQRANNTRYGLAAAVFTRDLDKALYFSQALQAGTVWVNTYNIVTCHTPFGGFKESGNGR 494
Query: 521 EKGSYSLSNYLQVKAV 536
E G L Y +VK V
Sbjct: 495 ELGEDGLKAYTEVKTV 510
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 546 | ||||||
| 356497822 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.979 | 0.994 | 0.789 | 0.0 | |
| 224064707 | 540 | predicted protein [Populus trichocarpa] | 0.985 | 0.996 | 0.786 | 0.0 | |
| 356501653 | 539 | PREDICTED: aldehyde dehydrogenase family | 0.974 | 0.987 | 0.790 | 0.0 | |
| 223452696 | 534 | mitochondrial benzaldehyde dehydrogenase | 0.978 | 1.0 | 0.785 | 0.0 | |
| 225424691 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.913 | 0.927 | 0.835 | 0.0 | |
| 356567618 | 536 | PREDICTED: aldehyde dehydrogenase family | 0.921 | 0.938 | 0.824 | 0.0 | |
| 356526813 | 536 | PREDICTED: aldehyde dehydrogenase family | 0.921 | 0.938 | 0.819 | 0.0 | |
| 225452510 | 535 | PREDICTED: aldehyde dehydrogenase family | 0.979 | 1.0 | 0.778 | 0.0 | |
| 297850852 | 534 | hypothetical protein ARALYDRAFT_472641 [ | 0.976 | 0.998 | 0.782 | 0.0 | |
| 449482989 | 540 | PREDICTED: aldehyde dehydrogenase family | 0.915 | 0.925 | 0.815 | 0.0 |
| >gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/546 (78%), Positives = 486/546 (89%), Gaps = 11/546 (2%)
Query: 2 AARRIPLLLSRSFTSSSPT-LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
++ RI LLSRSF S+S T LFSR + A + S AAA E+PI PP
Sbjct: 3 SSMRISRLLSRSFLSASTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPP 52
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
VKV++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GP
Sbjct: 53 VKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDHGP 112
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+MTAYER +I+LR ADL E+HNDE+AALETWDNGKP+EQSAQ E+PM RLFRYYAGW
Sbjct: 113 WPKMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGW 172
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAE
Sbjct: 173 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAE 232
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSALY SKLLHEAGLPPGVLN++SG+GPTAGAA+ASHM++DKLAFTGST TGK+VL+
Sbjct: 233 QTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLE 292
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 293 LAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVY 352
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G
Sbjct: 353 DEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFG 412
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
G+YI+PTVF+ VKDDMLIAK+EIFGPVQ+ILK+KDLD+VIQR+N + YGLAAGVFT N
Sbjct: 413 NSGFYIQPTVFSNVKDDMLIAKEEIFGPVQTILKFKDLDDVIQRANNTHYGLAAGVFTKN 472
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
++TANTL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG YSL NYLQVKAVVT+L
Sbjct: 473 INTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSL 532
Query: 541 KNPAWL 546
KNPAWL
Sbjct: 533 KNPAWL 538
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064707|ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|222843266|gb|EEE80813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/548 (78%), Positives = 483/548 (88%), Gaps = 10/548 (1%)
Query: 1 MAARRIPLLLSRSFTSSS--PTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPIT 58
MAA++I +LSRSF+S++ P FSR R S S ++ AA EDPIT
Sbjct: 1 MAAKKISTVLSRSFSSAAAPPCFFSRVR--------GGGGQSRLISRYNTTLAAVEDPIT 52
Query: 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
PPV V Y QLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+ EDVNRAVSAARKAFDE
Sbjct: 53 PPVSVKYNQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDVEDVNRAVSAARKAFDE 112
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
GPWPRMTAYERS+II RFADLLE+H DEIAALETWDNGKP+EQSA+ E+PMT R+FRYYA
Sbjct: 113 GPWPRMTAYERSRIIWRFADLLEKHTDEIAALETWDNGKPYEQSAKIEIPMTVRIFRYYA 172
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
GWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFP+LMF+WKVGPALACGNT+V+KT
Sbjct: 173 GWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPMLMFSWKVGPALACGNTVVIKT 232
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
AEQTPLSA+Y +KL HEAGLP GVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIV
Sbjct: 233 AEQTPLSAVYAAKLFHEAGLPDGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIV 292
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
L+LA+KSNLKPVTLELGGKSPFIVCEDADVD+A EL+H A+FFNQGQCCCAGSRTFVHE
Sbjct: 293 LELASKSNLKPVTLELGGKSPFIVCEDADVDQAVELSHSAVFFNQGQCCCAGSRTFVHER 352
Query: 359 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 418
VYD+FVEKA A A +R VGDPFK GI+QGPQ+DS+QFEKIL+ IRSGV+ GA L+ GG+R
Sbjct: 353 VYDEFVEKAKARANQRAVGDPFKEGIEQGPQVDSDQFEKILRIIRSGVESGANLKAGGDR 412
Query: 419 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 478
G GYYI+PTVF+ V+DDMLIAK+EIFGPVQSI K+KDLDEVIQRSN S+YGLAAG+FT
Sbjct: 413 FGTTGYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNNSRYGLAAGIFT 472
Query: 479 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
HNLDTANTL RAL+VG+VWINC+DVFDAAIPFGGYK SG GREKG YSL+NYLQVKAVVT
Sbjct: 473 HNLDTANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQVKAVVT 532
Query: 539 ALKNPAWL 546
+LKNPAWL
Sbjct: 533 SLKNPAWL 540
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501653|ref|XP_003519638.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/544 (79%), Positives = 483/544 (88%), Gaps = 12/544 (2%)
Query: 5 RIPLLLSRSFTSSSPT--LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVK 62
RI LLSRSF S+S T LFSR + A + S AAA E+PI PP+K
Sbjct: 6 RISRLLSRSFLSASTTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPPLK 55
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
V++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GPWP
Sbjct: 56 VEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDRGPWP 115
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
+MTAYER +I+LR ADL E+HND++AALETWDNGKP+EQSAQ E+PM RLFRYYAGWAD
Sbjct: 116 KMTAYERQRILLRAADLFEKHNDDLAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWAD 175
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
KI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAEQT
Sbjct: 176 KIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQT 235
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PLSALY SKLLHEAGLPPGVLNI+SG+GPTAGAA+ASHM++DKLAFTGST TGKIVL+LA
Sbjct: 236 PLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAFTGSTETGKIVLELA 295
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+
Sbjct: 296 ARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDE 355
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G
Sbjct: 356 FIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNS 415
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482
G+YI+PTVF+ VKDDMLIAK+EIFGPVQSILK+KDLD+VIQR+N + YGLAAGVFT N++
Sbjct: 416 GFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDLDDVIQRANNTHYGLAAGVFTKNIN 475
Query: 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 542
TANTL RALR G+VW+NCFD FDAAIPFGGYK SGQGREKG YSL NYLQVKAVVT+LKN
Sbjct: 476 TANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKN 535
Query: 543 PAWL 546
PAWL
Sbjct: 536 PAWL 539
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223452696|gb|ACM89738.1| mitochondrial benzaldehyde dehydrogenase [Antirrhinum majus] | Back alignment and taxonomy information |
|---|
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/546 (78%), Positives = 475/546 (86%), Gaps = 12/546 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
MAA R LLSRS P L G+ S L R Y ++AAAA E+PI PP
Sbjct: 1 MAAHRFSSLLSRSV----PLLSRGGKQSYLGRGV--------YRYGTAAAAALEEPIKPP 48
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
V V Y +LLINGQFVD+ASGKTFPTLDPR+G+VI HVAEG+AED+NRAV+AARKAFDEGP
Sbjct: 49 VSVQYDKLLINGQFVDAASGKTFPTLDPRSGEVIAHVAEGDAEDINRAVAAARKAFDEGP 108
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+M AYER KI+LRFADL+E+HNDE+AALE WD+GKP+EQ AQ E+PM RLFRYYAGW
Sbjct: 109 WPKMPAYERQKIMLRFADLVEKHNDEVAALEAWDSGKPYEQCAQVEIPMFVRLFRYYAGW 168
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPL+MF WKVGPALACGN++VLKTAE
Sbjct: 169 ADKIHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLVMFGWKVGPALACGNSVVLKTAE 228
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSAL VSKL HEAGLP GVLNIVSG+GPTAGAAL HM+VDKLAFTGST TGKIVL+
Sbjct: 229 QTPLSALLVSKLFHEAGLPEGVLNIVSGFGPTAGAALCRHMDVDKLAFTGSTETGKIVLE 288
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
L+AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 289 LSAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHEKVY 348
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+FVEKA A A+KR VGDPFK G++QGPQ+D++QFEKILKYIRSG + GA LETGG+RLG
Sbjct: 349 DEFVEKAKARALKRTVGDPFKAGMEQGPQVDADQFEKILKYIRSGAESGATLETGGDRLG 408
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
KGYYI+PTVF+ VKDDMLIAKDEIFGPVQ+ILK+K+LDEVI+R+N S YGLAAGVFT N
Sbjct: 409 TKGYYIQPTVFSDVKDDMLIAKDEIFGPVQTILKFKELDEVIRRANNSSYGLAAGVFTQN 468
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
LDTANT+MRALR G+VWINCFD FDAAIPFGGYK SG GREKG YSL NYLQVKAVVTAL
Sbjct: 469 LDTANTMMRALRAGTVWINCFDTFDAAIPFGGYKMSGIGREKGEYSLKNYLQVKAVVTAL 528
Query: 541 KNPAWL 546
KNPAWL
Sbjct: 529 KNPAWL 534
|
Source: Antirrhinum majus Species: Antirrhinum majus Genus: Antirrhinum Family: Plantaginaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424691|ref|XP_002263479.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296086543|emb|CBI32132.3| unnamed protein product [Vitis vinifera] gi|426204222|gb|AFY12671.1| mitochondrial aldehyde dehydrogenase 2B8 [Vitis quinquangularis] | Back alignment and taxonomy information |
|---|
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/499 (83%), Positives = 459/499 (91%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S AA E+PI P V V+YTQLLINGQFVD+A+GKTF TLDPRTG+VI VAEG+AEDVNR
Sbjct: 40 STAAVVEEPINPSVNVNYTQLLINGQFVDAATGKTFETLDPRTGNVIASVAEGDAEDVNR 99
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AVSAARKAFDEGPWPRM+ YERSKI+LRFADLLE+HNDEIAALETWDNGKPFEQ+A+ EV
Sbjct: 100 AVSAARKAFDEGPWPRMSPYERSKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEV 159
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227
P+ RL RYYAGWADKI GLT PADG + VQTLHEPIGVAGQIIPWNFPLLM+AWK+GPA
Sbjct: 160 PLVIRLMRYYAGWADKIHGLTVPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPA 219
Query: 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287
LACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLN+VSGYGPTAGAALASHM+VDKLA
Sbjct: 220 LACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLA 279
Query: 288 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 347
FTGST TGKIVLQLAA+SNLKPVTLELGGKSPFIVCEDA+VD+A ELAH+ALFFNQGQCC
Sbjct: 280 FTGSTATGKIVLQLAARSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCC 339
Query: 348 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 407
CAGSRTFVHES+YD+FVEKA A A++R VGDPFK GI+QGPQIDS+QFEKIL+YIRSGV+
Sbjct: 340 CAGSRTFVHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVE 399
Query: 408 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 467
GA LETGGER G +G++IKPTVF+ V+D MLIA+DEIFGPVQSILK+KDL EVI+R+NA
Sbjct: 400 NGATLETGGERFGKEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLGEVIRRANA 459
Query: 468 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSL 527
+ YGLAAGVFT NLDTANTL RAL+VG+VWINCFDVFDAAIPFGGYK SG GREKG YSL
Sbjct: 460 TSYGLAAGVFTQNLDTANTLTRALKVGTVWINCFDVFDAAIPFGGYKMSGHGREKGIYSL 519
Query: 528 SNYLQVKAVVTALKNPAWL 546
NYLQVKAV+T LKNPAWL
Sbjct: 520 QNYLQVKAVITPLKNPAWL 538
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567618|ref|XP_003552014.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/506 (82%), Positives = 464/506 (91%), Gaps = 3/506 (0%)
Query: 41 CGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
C YST+S A E+P+ P V+V++TQLLI+G+FVD+ASGKTFPTLDPRTG+VI HVAEG
Sbjct: 34 CKYSTSS---AIEEEPVKPSVQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEG 90
Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
+EDV+RAV+AARKAFD GPWP+MTAYER +I+LR ADLLE+HNDE+AALETWDNGKP+E
Sbjct: 91 HSEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYE 150
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
Q+A+ EVPM RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMF
Sbjct: 151 QAAKIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 210
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
AWKVGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASH
Sbjct: 211 AWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASH 270
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
MEVDKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALF
Sbjct: 271 MEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALF 330
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FNQGQCCCAGSRTFVHESVYD+FVEKA A A+KRVVGDPFKGGI+QGPQIDS+QFEKIL+
Sbjct: 331 FNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILR 390
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460
YIRSGV+ GA LETGG++LG KG+YI+PTVF+ VKD MLIA+DEIFGPVQSILK+KDL E
Sbjct: 391 YIRSGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIARDEIFGPVQSILKFKDLGE 450
Query: 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 520
V+QR+N ++YGLAAGVFT N+DTA TL RALRVG+VWINCFD FDAAIPFGGYK SGQGR
Sbjct: 451 VVQRANNTRYGLAAGVFTTNMDTAYTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGR 510
Query: 521 EKGSYSLSNYLQVKAVVTALKNPAWL 546
EKG YSL NYLQVKAVV LKNPAWL
Sbjct: 511 EKGEYSLKNYLQVKAVVNPLKNPAWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526813|ref|XP_003532011.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/503 (81%), Positives = 463/503 (92%)
Query: 44 STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
S S++AA E+PI P ++V++TQLLI+G+FVD+ASGKTF TLDPRTG+VI HVAEG +E
Sbjct: 34 SKFSTSAAIEEEPIKPSIQVEHTQLLIDGKFVDAASGKTFQTLDPRTGEVIAHVAEGHSE 93
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV+RAVSAARKAFD GPWP+MTAYER +I+LR ADL+E+HNDE+AALETWDNGKP+EQ+A
Sbjct: 94 DVDRAVSAARKAFDHGPWPKMTAYERQRILLRVADLIEKHNDELAALETWDNGKPYEQAA 153
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223
+ EVPM RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK
Sbjct: 154 KIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 213
Query: 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
VGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASHMEV
Sbjct: 214 VGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEV 273
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
DKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQ
Sbjct: 274 DKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQ 333
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
GQCCCAGSRTFVHE+VY++FV+KA A A++RVVGDPFKGGI+QGPQIDS+QFEKIL+YIR
Sbjct: 334 GQCCCAGSRTFVHENVYEEFVQKAKARALRRVVGDPFKGGIEQGPQIDSDQFEKILRYIR 393
Query: 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463
SGV+ GA LETGG++LG KG+YI+PTVF+ VKD MLIAKDEIFGPVQSILK+KDL EV+Q
Sbjct: 394 SGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIAKDEIFGPVQSILKFKDLGEVVQ 453
Query: 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 523
R+N ++YGLAAGVFT N+DTANTL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG
Sbjct: 454 RANNTRYGLAAGVFTKNMDTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKG 513
Query: 524 SYSLSNYLQVKAVVTALKNPAWL 546
YSL NYLQVKAVV LKNPAWL
Sbjct: 514 EYSLKNYLQVKAVVNPLKNPAWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452510|ref|XP_002274863.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296087691|emb|CBI34947.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/546 (77%), Positives = 476/546 (87%), Gaps = 11/546 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
MAA RI LLS S T++S L S GR S R G S S+A A E+PITPP
Sbjct: 1 MAAPRIFSLLSASSTAAS--LRSFGRYSRWGR---------GSSRFSTAVATEEEPITPP 49
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
V++DYTQLLING+FVD+ASGKTFPTLDPRTGDVI HVAEGEAED+NRAVSAARKAFDEGP
Sbjct: 50 VQIDYTQLLINGRFVDAASGKTFPTLDPRTGDVIAHVAEGEAEDINRAVSAARKAFDEGP 109
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+MT YERS I+ RFADLLE+H EIAALE+WDNGKP+EQ+A E+PM R+FRYYAGW
Sbjct: 110 WPKMTPYERSCILFRFADLLEKHCSEIAALESWDNGKPYEQAANVEIPMVIRVFRYYAGW 169
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADG +HVQTLHEPIGVAGQIIPWNFPLL++ WKVGPALACGNTIVLKTAE
Sbjct: 170 ADKIHGLTVPADGLHHVQTLHEPIGVAGQIIPWNFPLLLYGWKVGPALACGNTIVLKTAE 229
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSALY SKLL+EAGLPPGVLN+VSG+GPTAGAAL+SHM+VDKLAFTGST TGKIVL
Sbjct: 230 QTPLSALYASKLLYEAGLPPGVLNVVSGFGPTAGAALSSHMDVDKLAFTGSTGTGKIVLG 289
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
LAAKSNLKPVTLELGGKSPFIVCEDADVDKA EL+H ALF+NQGQ CC+GSRTFVHES+Y
Sbjct: 290 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELSHTALFYNQGQSCCSGSRTFVHESIY 349
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+F+EKA A A+KRVVGDPFK G++QGPQIDS+QF KIL YI+SG++ GA LE GGE+
Sbjct: 350 DEFIEKAKARALKRVVGDPFKKGVEQGPQIDSQQFNKILGYIKSGIEAGATLEAGGEKFS 409
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
+KGYYI+PTVF+ V D+MLIAK+EIFGPVQSILK+KDLDEVI+R+NA+ YGLAAG+FT N
Sbjct: 410 SKGYYIQPTVFSNVHDNMLIAKEEIFGPVQSILKFKDLDEVIRRANATHYGLAAGIFTQN 469
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
LDTANTL RALRVG+VWINCF VFDAAIPFGG K SG GREKG Y LSNY+QVKAVVT L
Sbjct: 470 LDTANTLTRALRVGTVWINCFFVFDAAIPFGGRKMSGHGREKGIYGLSNYMQVKAVVTPL 529
Query: 541 KNPAWL 546
KNPAWL
Sbjct: 530 KNPAWL 535
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850852|ref|XP_002893307.1| hypothetical protein ARALYDRAFT_472641 [Arabidopsis lyrata subsp. lyrata] gi|297339149|gb|EFH69566.1| hypothetical protein ARALYDRAFT_472641 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/547 (78%), Positives = 481/547 (87%), Gaps = 14/547 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFS-RGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MA+RR+ LLSRSF SSSP+LFS RG + G S+AAAA E+ ITP
Sbjct: 1 MASRRVSSLLSRSFMSSSPSLFSLRGMNR-------------GAQRYSNAAAAVENTITP 47
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI VAEG+AEDVNRAV+AARKAFDEG
Sbjct: 48 PVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVAEGDAEDVNRAVAAARKAFDEG 107
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWPRMTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQS Q EVPM R+FRYYAG
Sbjct: 108 PWPRMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSVQIEVPMLARVFRYYAG 167
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNTIVLKTA
Sbjct: 168 WADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTIVLKTA 227
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L
Sbjct: 228 EQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIIL 287
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 288 ELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERV 347
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF+KILKYI+ GV+ GA L+ GG+RL
Sbjct: 348 YDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFKKILKYIKYGVEAGATLQAGGDRL 407
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
G+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEVI R+N S+YGLAAGVFT
Sbjct: 408 GSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQ 467
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539
NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GREKG YSL+NYLQVKAVVT+
Sbjct: 468 NLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGLYSLNNYLQVKAVVTS 527
Query: 540 LKNPAWL 546
LKNPAWL
Sbjct: 528 LKNPAWL 534
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449482989|ref|XP_004156463.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/504 (81%), Positives = 457/504 (90%), Gaps = 4/504 (0%)
Query: 43 YSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEA 102
YSTAS A EDPITP VKV+Y QLLINGQFVDS SGKTFPTLDPRTG+VI VAEG+A
Sbjct: 41 YSTAS----AVEDPITPSVKVNYNQLLINGQFVDSVSGKTFPTLDPRTGEVIAEVAEGDA 96
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
D++ AVSAARKAFDEGPWP+MTAYERSKI+LRFADL+E+H +E+AALETWDNGK +EQS
Sbjct: 97 RDIDIAVSAARKAFDEGPWPKMTAYERSKIMLRFADLVEKHAEEVAALETWDNGKTYEQS 156
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
+ E+PM RLFRYY GWADKI GLT PADG YHVQTLHEPIGVAGQIIPWNFPL+MFAW
Sbjct: 157 LKIEIPMFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLVMFAW 216
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
KVGPALACGNTIVLKTAEQTPLSAL V+KL HEAGLP GVLNIVSGYGPTAGAALASHME
Sbjct: 217 KVGPALACGNTIVLKTAEQTPLSALLVAKLFHEAGLPEGVLNIVSGYGPTAGAALASHME 276
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
VDKLAFTGST TGK+VL+LA+KSNLKPVTLELGGKSPFIVCEDADVDKA E+AH+ALFFN
Sbjct: 277 VDKLAFTGSTETGKVVLELASKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFN 336
Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402
QGQCCCAGSRTFVHE V+D+FVEKA A RVVGDPF GGI+QGPQ+D+EQF+KILKYI
Sbjct: 337 QGQCCCAGSRTFVHEKVHDEFVEKARNRAANRVVGDPFLGGIEQGPQVDAEQFKKILKYI 396
Query: 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 462
+ G++GGA LE GG+R G+KGYY++PTVF+ VKDDM IA+DEIFGPVQ+ILKYKD+DEVI
Sbjct: 397 KYGIEGGATLEAGGDRFGSKGYYVQPTVFSNVKDDMKIAEDEIFGPVQTILKYKDIDEVI 456
Query: 463 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 522
+R+NAS+YGLAAGVFT N++TAN L R+LRVGSVWINCFDVFDAA+PFGGYK SG GREK
Sbjct: 457 RRANASRYGLAAGVFTQNINTANRLTRSLRVGSVWINCFDVFDAAVPFGGYKMSGHGREK 516
Query: 523 GSYSLSNYLQVKAVVTALKNPAWL 546
G YSLSNYLQVKAVVT L+NPAWL
Sbjct: 517 GIYSLSNYLQVKAVVTPLENPAWL 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 546 | ||||||
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 0.976 | 0.998 | 0.765 | 4.3e-228 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.983 | 0.998 | 0.738 | 8.5e-223 | |
| UNIPROTKB|Q2XQV4 | 521 | ALDH2 "Aldehyde dehydrogenase, | 0.869 | 0.911 | 0.613 | 1.4e-156 | |
| UNIPROTKB|P20000 | 520 | ALDH2 "Aldehyde dehydrogenase, | 0.869 | 0.913 | 0.607 | 4.9e-156 | |
| UNIPROTKB|F1PBJ8 | 521 | ALDH2 "Uncharacterized protein | 0.869 | 0.911 | 0.611 | 9.2e-155 | |
| MGI|MGI:99600 | 519 | Aldh2 "aldehyde dehydrogenase | 0.860 | 0.905 | 0.613 | 1.9e-154 | |
| RGD|69219 | 519 | Aldh2 "aldehyde dehydrogenase | 0.860 | 0.905 | 0.611 | 2.4e-154 | |
| ZFIN|ZDB-GENE-030326-5 | 516 | aldh2.2 "aldehyde dehydrogenas | 0.868 | 0.918 | 0.589 | 1.7e-153 | |
| UNIPROTKB|E1BT93 | 519 | ALDH2 "Uncharacterized protein | 0.875 | 0.921 | 0.580 | 2.2e-153 | |
| UNIPROTKB|P05091 | 517 | ALDH2 "Aldehyde dehydrogenase, | 0.860 | 0.909 | 0.605 | 2.8e-153 |
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2201 (779.8 bits), Expect = 4.3e-228, P = 4.3e-228
Identities = 419/547 (76%), Positives = 474/547 (86%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFS-RGRDSSLCRXXXXXXXXXXXXXXXXXXXXXEDPITP 59
MA+RR+ LLSRSF SSS ++FS RG + R E+ ITP
Sbjct: 1 MASRRVSSLLSRSFMSSSRSIFSLRGMNRGAQRYSNLAAAV-------------ENTITP 47
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI V+EG+AEDVNRAV+AARKAFDEG
Sbjct: 48 PVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEG 107
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQSAQ EVPM R+FRYYAG
Sbjct: 108 PWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAG 167
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNT+VLKTA
Sbjct: 168 WADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTA 227
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L
Sbjct: 228 EQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIIL 287
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 288 ELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERV 347
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKYI+ GV+ GA L+ GG+RL
Sbjct: 348 YDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRL 407
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
G+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEVI R+N S+YGLAAGVFT
Sbjct: 408 GSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQ 467
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539
NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GREKG YSL+NYLQVKAVVT+
Sbjct: 468 NLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTS 527
Query: 540 LKNPAWL 546
LKNPAWL
Sbjct: 528 LKNPAWL 534
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2151 (762.2 bits), Expect = 8.5e-223, P = 8.5e-223
Identities = 404/547 (73%), Positives = 467/547 (85%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRXXXXXXXXXXXXXXXXXXXXXEDPITP 59
MAARR+ LLSRSF++SSP LF S+GR+ C E+ I P
Sbjct: 1 MAARRVSSLLSRSFSASSPLLFRSQGRN---C------YNGGILRRFGTSSAAAEEIINP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct: 52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAG
Sbjct: 112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++
Sbjct: 352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQI 411
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+DEVI+R+N ++YGLAAGVFT
Sbjct: 412 GDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTK 471
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539
NLDTAN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+NYLQ+KAVVTA
Sbjct: 472 NLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTA 531
Query: 540 LKNPAWL 546
L PAW+
Sbjct: 532 LNKPAWI 538
|
|
| UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
Identities = 292/476 (61%), Positives = 356/476 (74%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF G P
Sbjct: 37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S+YGLAA VFT +
Sbjct: 397 DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKD 456
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 457 LDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTV 512
|
|
| UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1521 (540.5 bits), Expect = 4.9e-156, P = 4.9e-156
Identities = 289/476 (60%), Positives = 355/476 (74%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
+V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ DV+RAV AAR AF G P
Sbjct: 36 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 95
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W RM A ER +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 96 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 155
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AE
Sbjct: 156 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 215
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 216 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 275
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 276 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 335
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQ+D QF+K+L YI+SG + GAKL GG
Sbjct: 336 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAA 395
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +
Sbjct: 396 DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKD 455
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 456 LDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTV 511
|
|
| UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1509 (536.3 bits), Expect = 9.2e-155, P = 9.2e-155
Identities = 291/476 (61%), Positives = 354/476 (74%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
+V Y Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G P
Sbjct: 37 EVFYNQIFINNEWHDAVSKKTFPTINPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W RM A +R +++ R ADL+ER +AALET DNGKP+ S ++ M R RYYAGW
Sbjct: 97 WRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLRCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN IV+K AE
Sbjct: 157 ADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVIVMKVAE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NI+ G+GPTAGAA+ASH +VDK+AFTGST G +V
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLVQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A SNLK VTLELGGKSP I+ DAD++ A E AH+ALFFNQGQCCCAGSRTFV E VY
Sbjct: 277 AAGNSNLKRVTLELGGKSPNIIMSDADMNWAVEQAHFALFFNQGQCCCAGSRTFVQEDVY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S+YGLAA VFT +
Sbjct: 397 DRGYFIQPTVFGDVQDTMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKD 456
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 457 LDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 512
|
|
| MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1506 (535.2 bits), Expect = 1.9e-154, P = 1.9e-154
Identities = 289/471 (61%), Positives = 350/471 (74%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMT 125
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV++AV AAR AF G PW RM
Sbjct: 40 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMD 99
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 100 ASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 159
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+
Sbjct: 160 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 219
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH VDK+AFTGST G ++ A S
Sbjct: 220 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSS 279
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E+VYD+FVE
Sbjct: 280 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVE 339
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG GAKL GG +GY+
Sbjct: 340 RSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYF 399
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485
I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD AN
Sbjct: 400 IQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKAN 459
Query: 486 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 460 YLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 510
|
|
| RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1505 (534.8 bits), Expect = 2.4e-154, P = 2.4e-154
Identities = 288/471 (61%), Positives = 350/471 (74%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMT 125
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV++AV AA+ AF G PW RM
Sbjct: 40 QIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMD 99
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 100 ASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 159
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+
Sbjct: 160 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 219
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G ++ A S
Sbjct: 220 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSS 279
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E VYD+FVE
Sbjct: 280 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVE 339
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG GAKL GG +GY+
Sbjct: 340 RSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYF 399
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485
I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD AN
Sbjct: 400 IQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKAN 459
Query: 486 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 460 YLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 510
|
|
| ZFIN|ZDB-GENE-030326-5 aldh2.2 "aldehyde dehydrogenase 2.2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1497 (532.0 bits), Expect = 1.7e-153, P = 1.7e-153
Identities = 280/475 (58%), Positives = 352/475 (74%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PW 121
V Y ++ IN ++ D+ S KTFPT++P TG++I HVAEG+ DV++AV AAR AF G PW
Sbjct: 33 VHYNKIFINNEWHDAVSKKTFPTINPATGEIICHVAEGDKADVDKAVKAARDAFKLGSPW 92
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
RM A +R ++ R AD +ER +A LET DNGKP+ S +VPM + RYYAGWA
Sbjct: 93 RRMDASQRGLLLSRLADCIERDAAYLAELETLDNGKPYAVSFSVDVPMVVKCMRYYAGWA 152
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
DK +G T P DG Y T HEPIGV GQIIPWNFPLLM AWK+GPALA GNT+V+K AEQ
Sbjct: 153 DKWEGKTIPIDGNYFCYTRHEPIGVCGQIIPWNFPLLMQAWKLGPALATGNTVVMKVAEQ 212
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+ALY++ L+ E G P GV+NIV G GPTAGAA+ASHM+VDK+AFTGST G ++ +
Sbjct: 213 TPLTALYIASLIKEVGFPAGVVNIVPGMGPTAGAAIASHMDVDKVAFTGSTDVGHLIQRA 272
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
++ SNLK VTLELGGKSP I+ DA++++A E +H ALFFNQGQCCCAG+RTFV ES+YD
Sbjct: 273 SSASNLKKVTLELGGKSPNIILSDANMEEAVEQSHIALFFNQGQCCCAGTRTFVQESIYD 332
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+FVE++ A R+VGDPF +QGPQ++ +QF+K+L YI SG GAKL GG
Sbjct: 333 EFVERSVERAKNRIVGDPFDLNTEQGPQVNEDQFKKVLGYISSGKREGAKLMCGGAPAAE 392
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
+GY+I+PTVF VKDDM IA++EIFGPV ILK+K L+EVI+R+N S+YGLA VFT ++
Sbjct: 393 RGYFIQPTVFGDVKDDMTIAREEIFGPVMQILKFKSLEEVIERANDSKYGLAGAVFTQDI 452
Query: 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
D AN + LR G+VWINC++VF PFGGYK SG GRE G Y L NY +VK V
Sbjct: 453 DKANYISHGLRAGTVWINCYNVFGVQAPFGGYKASGIGREMGEYGLENYTEVKTV 507
|
|
| UNIPROTKB|E1BT93 ALDH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 278/479 (58%), Positives = 359/479 (74%)
Query: 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
P ++ Y ++ IN ++ D+ S KTFPT++P TG+VI VAEG+ DV++AV AAR AF
Sbjct: 32 PSPEIAYNKIFINNEWHDAVSKKTFPTVNPATGEVICQVAEGDKADVDKAVKAARAAFQL 91
Query: 119 G-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
G PW RM A R K++ R ADL+ER +AALET DNGKP+ S ++ M + RY+
Sbjct: 92 GSPWRRMDASHRGKLLNRLADLIERDRAYLAALETLDNGKPYSISYLVDLDMVVKCLRYF 151
Query: 178 AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
AGW+DK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K
Sbjct: 152 AGWSDKFHGKTIPLDGDFFCYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 211
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
AEQTPLSALYV+ L+ EAG PPGV+NI+ GYGPTAGAA+++HM+VDK+AFTGST G +
Sbjct: 212 VAEQTPLSALYVANLIKEAGFPPGVVNIIPGYGPTAGAAISAHMDVDKVAFTGSTEVGHL 271
Query: 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
+ + AA+SNLK VTLELGGKSP I+ DAD+D A + AH+ALFFNQGQCCCAGSRT+V E
Sbjct: 272 IKKAAAESNLKRVTLELGGKSPNIIMSDADMDWAVDQAHFALFFNQGQCCCAGSRTYVQE 331
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
+Y++FVE++ A RVVG+PF +QGPQ+D EQF+KIL YI +G GAKL GG
Sbjct: 332 DIYNEFVERSVEKAKSRVVGNPFDFKTEQGPQVDEEQFKKILGYISTGKREGAKLLCGGN 391
Query: 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477
+GY+++PTVF V+D+M IA++EIFGPV I+K+K ++E+I+R+N S+YGLAA VF
Sbjct: 392 PAADRGYFVQPTVFGDVQDNMTIAREEIFGPVMQIMKFKTIEEIIERANNSKYGLAAAVF 451
Query: 478 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
T ++D AN + +ALR G+VW+NC++VF A PFGGYK SG GRE G Y L YL+VK V
Sbjct: 452 TKDIDKANYVSQALRAGTVWVNCYNVFGAQAPFGGYKASGNGRELGEYGLEAYLEVKNV 510
|
|
| UNIPROTKB|P05091 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1495 (531.3 bits), Expect = 2.8e-153, P = 2.8e-153
Identities = 285/471 (60%), Positives = 349/471 (74%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMT 125
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 38 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 97
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 98 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 157
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+
Sbjct: 158 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 217
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A S
Sbjct: 218 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 277
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE
Sbjct: 278 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVE 337
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY+
Sbjct: 338 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYF 397
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485
I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD AN
Sbjct: 398 IQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKAN 457
Query: 486 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 458 YLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 508
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P42041 | ALDH_ALTAL | 1, ., 2, ., 1, ., 3 | 0.5188 | 0.8626 | 0.9476 | N/A | no |
| Q25417 | ALDH2_LEITA | 1, ., 2, ., 1, ., 3 | 0.5102 | 0.8864 | 0.9718 | N/A | no |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5175 | 0.8754 | 0.9617 | yes | no |
| P40108 | ALDH_DAVTA | 1, ., 2, ., 1, ., 3 | 0.5431 | 0.8663 | 0.9536 | N/A | no |
| Q9SU63 | AL2B4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7440 | 0.9835 | 0.9981 | no | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.5294 | 0.8699 | 0.9595 | yes | no |
| P47738 | ALDH2_MOUSE | 1, ., 2, ., 1, ., 3 | 0.5927 | 0.9047 | 0.9518 | yes | no |
| P11884 | ALDH2_RAT | 1, ., 2, ., 1, ., 3 | 0.5907 | 0.9047 | 0.9518 | yes | no |
| Q8S528 | AL2B7_ARATH | 1, ., 2, ., 1, ., 3 | 0.8039 | 0.9249 | 0.9456 | yes | no |
| Q29490 | ALDH1_MACPR | 1, ., 2, ., 1, ., 3 | 0.5405 | 0.8791 | 0.9580 | N/A | no |
| Q28399 | ALDH1_ELEED | 1, ., 2, ., 1, ., 3 | 0.5384 | 0.8791 | 0.9580 | N/A | no |
| P81178 | ALDH2_MESAU | 1, ., 2, ., 1, ., 3 | 0.5975 | 0.8974 | 0.98 | N/A | no |
| P51977 | AL1A1_SHEEP | 1, ., 2, ., 1, ., 3, 6 | 0.5463 | 0.9047 | 0.9860 | N/A | no |
| Q5RF00 | ALDH2_PONAB | 1, ., 2, ., 1, ., 3 | 0.5742 | 0.9358 | 0.9883 | yes | no |
| P46367 | ALDH4_YEAST | 1, ., 2, ., 1, ., 3 | 0.5020 | 0.8846 | 0.9306 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5497 | 0.8699 | 0.9557 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5123 | 0.8772 | 0.9522 | yes | no |
| Q8HYE4 | AL1A1_MACFA | 1, ., 2, ., 1, ., 3, 6 | 0.5393 | 0.9029 | 0.9840 | N/A | no |
| P86886 | AL1A1_MESAU | 1, ., 2, ., 1, ., 3, 6 | 0.5613 | 0.8791 | 0.96 | N/A | no |
| P20000 | ALDH2_BOVIN | 1, ., 2, ., 1, ., 3 | 0.5947 | 0.9047 | 0.95 | yes | no |
| P05091 | ALDH2_HUMAN | 1, ., 2, ., 1, ., 3 | 0.5761 | 0.9358 | 0.9883 | yes | no |
| Q27640 | ALDH_ENCBU | 1, ., 2, ., 1, ., 3 | 0.5345 | 0.8717 | 0.9577 | N/A | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.6083 | 0.8772 | 0.9193 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.5.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.2.1.36 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.2.1.3 | 0.979 |
| 3rd Layer | 1.2.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 546 | |||
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 0.0 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 0.0 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 0.0 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 0.0 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 0.0 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 0.0 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 0.0 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-180 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-178 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-178 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-176 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-173 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-169 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-169 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-167 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-164 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-164 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-163 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-160 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-159 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-159 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-158 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-157 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-156 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-152 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-152 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-151 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-151 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-147 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-146 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-141 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-138 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-138 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-138 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-137 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-136 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-136 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-132 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-131 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-130 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-129 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-126 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-124 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-122 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-119 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-118 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-118 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-115 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-115 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-113 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-113 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-112 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 1e-112 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-111 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-110 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-110 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-109 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-108 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-107 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-106 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-106 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-103 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-95 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 3e-94 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 4e-86 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 5e-84 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 9e-84 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-81 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 3e-78 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 1e-77 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 6e-76 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 2e-72 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 6e-72 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 7e-68 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 2e-67 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-66 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 4e-66 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-65 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 5e-65 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-64 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 2e-64 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-62 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 5e-62 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 9e-62 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 1e-61 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 9e-58 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 1e-56 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 4e-56 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 2e-52 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 9e-51 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 6e-50 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 1e-46 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 3e-46 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 4e-36 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 2e-32 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-31 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 1e-25 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 1e-24 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 3e-20 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 4e-18 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 8e-18 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 3e-17 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 3e-13 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 2e-06 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 1e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 2e-04 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 3e-04 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 0.004 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 1078 bits (2790), Expect = 0.0
Identities = 450/547 (82%), Positives = 496/547 (90%), Gaps = 10/547 (1%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MAARRI LLSRS ++SS L SRGR+ R G S+AAAA E+PITP
Sbjct: 1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGR---------GIRRFSTAAAAVEEPITP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PV+V YTQLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+AEDVNRAV+AARKAFDEG
Sbjct: 52 PVQVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+MTAYERS+I+LRFADLLE+HNDE+AALETWDNGKP+EQSA+ E+PM RLFRYYAG
Sbjct: 112 PWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSALY +KLLHEAGLPPGVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIVL
Sbjct: 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KRVVGDPFK G++QGPQIDSEQFEKIL+YI+SGV+ GA LE GG+R
Sbjct: 352 YDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF 411
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
G+KGYYI+PTVF+ V+DDMLIA+DEIFGPVQSILK+KDLDEVI+R+N ++YGLAAGVFT
Sbjct: 412 GSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQ 471
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539
NLDTANTL RALRVG+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+NYLQVKAVVT
Sbjct: 472 NLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTP 531
Query: 540 LKNPAWL 546
LKNPAWL
Sbjct: 532 LKNPAWL 538
|
Length = 538 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 928 bits (2401), Expect = 0.0
Identities = 375/476 (78%), Positives = 429/476 (90%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
V +T+L INGQFVD+ASGKTFPT+DPR G+VI HVAEG+AEDV+RAV AARKAFDEGPWP
Sbjct: 1 VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
RMT YERS+I+LRFADLLE+H DE+AALETWDNGKP+EQ+ EVP+ RLFRYYAGWAD
Sbjct: 61 RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
KI G+T PADGP+HV TLHEPIGV GQIIPWNFPLLMFAWKVGPALACGNTIVLK AEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PLSAL +KL EAGLP GVLNIV+G+GPTAGAA+ASHM+VDK+AFTGST GKI++QLA
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHES+YD+
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
FVEKA A A+KRVVGDPF+ G++QGPQ+D EQFEKIL YI G + GA L TGG+R+G+K
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482
GYYI+PT+F+ VKDDM IA+DEIFGPVQSILK+K +DEVI+R+N S+YGLAAGVF+ N+D
Sbjct: 361 GYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNID 420
Query: 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
TANTL RAL+ G+VW+NC+DVFDA+IPFGGYK SG GREKG Y+L+NYLQVKAVV
Sbjct: 421 TANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 834 bits (2156), Expect = 0.0
Identities = 302/472 (63%), Positives = 369/472 (78%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T L IN +FVDS SGKTFPT++P T +VI VAE + EDV+ AV AAR AF+ G W +M
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER +++ + ADL+ER DE+AALE+ DNGKP E+SA+ +V ++ + RYYAGWADKIQ
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P DG + T EPIGV GQIIPWNFPLLM AWK+ PALA GNT+VLK AEQTPLS
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
ALY+++L+ EAG PPGV+NIV G+GPTAGAA++SHM+VDK+AFTGST G+ +++ AAKS
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLK VTLELGGKSP IV +DAD+DKA E A + +FFNQGQCCCAGSR FV ES+YD+FVE
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
K A A KRVVGDPF QGPQ+ QF+KIL YI SG GA L TGGER G+KGY+
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYF 363
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485
I+PTVFT VKDDM IAK+EIFGPV +ILK+K DEVI+R+N ++YGLAAGVFT +++ A
Sbjct: 364 IQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKAL 423
Query: 486 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
+ RAL+ G+VW+N ++VFDAA+PFGG+KQSG GRE G L Y QVKAV
Sbjct: 424 RVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 779 bits (2013), Expect = 0.0
Identities = 291/478 (60%), Positives = 359/478 (75%), Gaps = 1/478 (0%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
++ YT++ IN ++ DS SGKTFPT++P TG+ I V EG+ DV++AV AAR AF G
Sbjct: 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PW M A ER +++ + ADL+ER +A+LET DNGKPF +S ++P ++ RYYAG
Sbjct: 62 PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G T P DG + T HEP+GV GQIIPWNFPLLM AWK+ PALACGNT+VLK A
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+ALY++ L+ EAG PPGV+N+V GYGPTAGAA++SH ++DK+AFTGST GK++
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
Q A KSNLK VTLELGGKSP IV DAD+D A E AH ALFFN GQCCCAGSRTFV ES+
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FV+++ A KRVVG+PF +QGPQID EQF+KIL+ I SG GAKLE GG+R
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I K+K +DEVI+R+N + YGLAA VFT
Sbjct: 362 GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTK 421
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
++D A T ALR G+VW+NC++V PFGGYK SG GRE G Y L Y +VK V
Sbjct: 422 DIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 680 bits (1756), Expect = 0.0
Identities = 275/485 (56%), Positives = 358/485 (73%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
++ +T+L ING+FVD+ASGKTF T DPRTG+VI +AEG+ EDV+ AV AAR+AFD GPW
Sbjct: 17 EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPW 76
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
PRM+ +ER +I+++FADL+E H +E+AAL+T D GK F ++P L RYYAG A
Sbjct: 77 PRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAA 136
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
DKI G T TL EPIGV G IIPWNFP MF KV PALA G T+V+K AEQ
Sbjct: 137 DKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPLSAL+ + L AG+P GV+N+V+G+GPTAGAA+ASHM+VDK++FTGST G+ ++Q
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA SNLK V+LELGGKSP ++ +DADVD A +LA +F+N+G+ C A SR +V E +YD
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYD 316
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+FV+K A VVGDPF +QGPQ+D +QFEKIL YI G GA L TGG+ G
Sbjct: 317 EFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD 376
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
KGYYI+PT+FT V +DM IA+DEIFGPV S++K+K ++E I+++N ++YGLAAG+ T +L
Sbjct: 377 KGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDL 436
Query: 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541
D ANT+ R++R G++W+NC+ FD PFGGYK SG GR++G +L YLQVK+VVT L
Sbjct: 437 DVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLY 496
Query: 542 NPAWL 546
N WL
Sbjct: 497 NSPWL 501
|
Length = 501 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 645 bits (1666), Expect = 0.0
Identities = 238/464 (51%), Positives = 304/464 (65%), Gaps = 6/464 (1%)
Query: 74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
+VDS S +T ++P TG+VI V AEDV+ AV+AAR AF W + ER+ I+
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKA--WAKTPPSERAAIL 57
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
L+ ADLLE DE+A LET + GKP + A+ EVP RYYAG A K++G T P+D
Sbjct: 58 LKAADLLEERRDELAELETLETGKPLAE-ARGEVPRAIDTLRYYAGLARKLEGETLPSDP 116
Query: 194 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253
T EP+GV G I PWNFPLL+ AWK+ PALA GNT+VLK +E TPL+AL +++L
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 254 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313
EAGLPPGVLN+V+G G G AL H +VDK++FTGST G+ + + AAK NLK VTLE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRVTLE 235
Query: 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373
LGGK+P IV +DAD+D A E A + F N GQ C AGSR VHES+YD+FVE+ A
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295
Query: 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 433
VGDP GP I +Q E++L YI + GAKL GGE KGY+++PTV
Sbjct: 296 LKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355
Query: 434 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 493
V DM IA++EIFGPV S++ +KD DE I+ +N ++YGLAAGVFT++L+ A + R L
Sbjct: 356 VTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEA 415
Query: 494 GSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
G VWIN + D A+PFGG+KQSG GRE G L Y + K V
Sbjct: 416 GMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 619 bits (1598), Expect = 0.0
Identities = 256/472 (54%), Positives = 332/472 (70%), Gaps = 2/472 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-M 124
T L ING+FVDS G T +P TG +IT +AE DV+ AV A AF E W +
Sbjct: 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAF-ETDWGLKV 65
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
+ +R + + + ADL+ER+ D +A++E DNGK F + + +V + FRYY GWADKI
Sbjct: 66 SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G D T HEPIGV GQIIPWNFPLLM AWK+ PALA GNTIVLK +E TPL
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SALY++KL+ EAG PPGV+N+VSGYG T G A++SHM++DK+AFTGST G+ V++ AAK
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP IV +DAD++ A Y +FFN GQ CCAGSR +V E +YD+FV
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
++ A K VGDPF QGPQ+ Q+E+I+ YI SG GA +ETGG+R G +GY
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY 365
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484
+I+PT+FT V +DM I K+EIFGPV +++K+K +E I+R+N S YGLAA VFT+N++ A
Sbjct: 366 FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNA 425
Query: 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+ AL+ G+VW+NC+++ +PFGGYKQSG GRE G Y+L NY Q+KAV
Sbjct: 426 IRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 607 bits (1567), Expect = 0.0
Identities = 245/482 (50%), Positives = 317/482 (65%), Gaps = 9/482 (1%)
Query: 62 KVDYTQ---LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
Y Q L IN +FV S+ G+T T++P TG+VI V EDV++AV AARKAF E
Sbjct: 1 GKSYDQPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAF-E 59
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
W ++T ER +++ + ADL+E++ D +AA+E D+GKP+ +A ++ + RYYA
Sbjct: 60 SWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYA 119
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
GWADKIQG T P TLHEP GV GQIIPWN+PL M AWK+ PALA GNT+V+K
Sbjct: 120 GWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKP 179
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
AE TPLS LY + L+ EAG PPGV+NI+ GYG AG+ALA H +VDK+AFTGST TG++V
Sbjct: 180 AENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLV 239
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
++ AA NLK VTLE GGKSP +V EDAD+D+A + A + +N GQ C A SR +V ES
Sbjct: 240 MKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQES 298
Query: 359 VYDQFVEKANALAMKR-VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
+YD+FVEK + VG PF GPQ+ Q++++L YI G GAKL GGE
Sbjct: 299 IYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGE 358
Query: 418 RLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 474
+ KGY+I PT+FT V DM I K+EIFGPV I K+K +E I+++N + YGLAA
Sbjct: 359 KAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAA 418
Query: 475 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534
VFT ++ A+ + R L G VWIN + D +PFGG+K SG GRE G Y L Y Q K
Sbjct: 419 AVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTK 478
Query: 535 AV 536
AV
Sbjct: 479 AV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 597 bits (1541), Expect = 0.0
Identities = 231/462 (50%), Positives = 307/462 (66%), Gaps = 7/462 (1%)
Query: 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139
G+TF T++P TG V+ VA +A DV+RAV+AAR+AF+ G W R++ ER ++LR ADL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT 199
+E H DE+A LET D GKP + +VP FR+YA DK+ G AP
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPT--GPDALA 118
Query: 200 L--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
L EP+GV G ++PWNFPLLM AWK+ PALA GN++VLK AEQ+PL+AL +++L EAG
Sbjct: 119 LITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAG 178
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
LP GVLN+V G+G TAG AL HM+VD LAFTGST G+ L+ + +SNLK V LE GGK
Sbjct: 179 LPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGK 238
Query: 318 SPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
SP IV DA D+D AAE A +F+NQG+ C AGSR VHES+ D+F+EK A A +
Sbjct: 239 SPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKP 298
Query: 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGV 434
GDP + G + F+K+L YI SG GA+L GG+R+ G++++PTVF GV
Sbjct: 299 GDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGV 358
Query: 435 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 494
DM IA++EIFGPV S++ + +E + +N S YGLAA V+T +L A+ + R LR G
Sbjct: 359 TPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAG 418
Query: 495 SVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+VW+NCFD D PFGG+KQSG GR+K ++L Y ++K
Sbjct: 419 TVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 579 bits (1495), Expect = 0.0
Identities = 219/436 (50%), Positives = 283/436 (64%), Gaps = 7/436 (1%)
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+ AV+AAR AF W + ER+ I+ + ADLLE +E+AALET + GKP + A
Sbjct: 1 DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALG 57
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKV 224
EV FRYYAG A ++ G P+ P + EP+GV G I PWNFPLL+ AWK+
Sbjct: 58 EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
PALA GNT+VLK +E TPL+AL +++LL EAGLPPGVLN+V+G G GAALASH VD
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
K++FTGST GK +++ AA+ NLK VTLELGGKSP IV +DAD+D A + A + F N G
Sbjct: 178 KISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
Q C A SR VHES+YD+FVE+ VG+P GP I + Q +++L YI
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIED 296
Query: 405 GVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463
GAKL GG+RL G KGY++ PTV T V DM IA++EIFGPV ++ +KD +E I+
Sbjct: 297 AKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIE 356
Query: 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREK 522
+N ++YGLAAGVFT +L+ A + L G+VWIN + V + + PFGG KQSG GRE
Sbjct: 357 LANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREG 416
Query: 523 GSYSLSNYLQVKAVVT 538
G Y L Y + K V
Sbjct: 417 GPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 568 bits (1466), Expect = 0.0
Identities = 234/473 (49%), Positives = 304/473 (64%), Gaps = 10/473 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+LLI+G++VD AS T ++P TG+VI V AEDV+ AV+AAR AF+ W R++
Sbjct: 1 YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R ADLLE +E+AAL T + GKP + A+ E+ RYYA A +++
Sbjct: 57 AEERAAILRRIADLLEARAEELAALITLETGKPISE-ARGEIARAADFIRYYAEEARRLE 115
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P D EP+GV G I PWNFPL + AWK+ PALA GNT+VLK +EQTPLS
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L EAGLP GVLN+V+G G G AL +H +VD ++FTGST G+ + AA
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA- 234
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLKPVTLELGGKSP IV EDAD+D A + A + FFN GQ C A SR VHESVYD+FVE
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
+ A A VGDP GP I EQ +++ YI V GA+L GG+R G GY+
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYF 352
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485
++PT+ GV DM IA++EIFGPV ++++KD +E I+ +N ++YGLAA +FT +L A
Sbjct: 353 VEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAF 412
Query: 486 TLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+ R L G V IN A +PFGG KQSG GRE G Y L + +VK V
Sbjct: 413 RVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 560 bits (1446), Expect = 0.0
Identities = 217/459 (47%), Positives = 289/459 (62%), Gaps = 9/459 (1%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG+ V E A DV+RAV+AAR AF+ G W ++T ER K++ R ADL+E +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 145 DEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 202
+E+A LET DNGK E AQ V +RYYAG ADKI+G P D G Y T E
Sbjct: 61 EELAELETRDNGKLIRETRAQ--VRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118
Query: 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262
P+GV I PWN PLL+ A K+ PALA GNT+VLK +E TP S L ++KL EAG PPGV
Sbjct: 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV 178
Query: 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
+N+V+G+GP G AL H V K+AFTG T TG+ + + AA+ NL PVTLELGGKSP IV
Sbjct: 179 VNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIV 237
Query: 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
+DAD+D A +F GQ C AGSR V S+YD+FVE+ A A VGDP
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 438
Q GP Q EK+ +Y+ + GA++ TGGER GY+ +PT+ V +DM
Sbjct: 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDM 357
Query: 439 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 498
IA++E+FGPV S++ + D +E I +N S+YGLAAG++T +L A+ + RA+ G+VW+
Sbjct: 358 RIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWV 417
Query: 499 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
N + + PFGG+K SG GRE G ++ Y Q K+V
Sbjct: 418 NTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 560 bits (1444), Expect = 0.0
Identities = 211/476 (44%), Positives = 299/476 (62%), Gaps = 6/476 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V++ASGKT ++P G+VI V EG AED RA++AAR+AFD G WP + A ER
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ ++ R AD + +E+A LET + GK +S + ++ FRYYAG A K G
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVY 120
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
+T+ EP+GV G I PWN+PLL AWK+ PALA GNT+V+K +E TPL+ + +
Sbjct: 121 DVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
+L+ EAGLP GV+N+V+G G T GA LA +VD ++FTG T TG+ +++ AA N+K
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKK 239
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
V LELGGK+P IV DAD + A + A +FFN GQ C AGSR V ES++D+FV
Sbjct: 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAE 299
Query: 370 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYY 425
A K +G+ + GP + +E EK+L YI+ G + GA+L GG+R AKGY+
Sbjct: 300 RAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYF 359
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485
++PT+F V M I ++EIFGPV ++ ++ +E I+ +N + YGLA V+T ++ AN
Sbjct: 360 VEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARAN 419
Query: 486 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541
+ R LR G+VWIN + + A P+GGYKQSG GRE G L Y + K + L
Sbjct: 420 RVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININLS 475
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 546 bits (1408), Expect = 0.0
Identities = 232/456 (50%), Positives = 316/456 (69%), Gaps = 3/456 (0%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
TL+P TG++I VA+ AEDV+ AV+AAR AF+ W M ER +I+ R A+L+ +
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DE+A LE+ D GKP + + +VP FRYYAGWADKI+G P GP+ T+ EP+
Sbjct: 59 DELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV G I+PWNFPL+ AWKV PALA GNT+VLK AE TPLSAL +++L+ EAG P GVLN
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V+G+G AGAAL H +VDK+ FTGST G+ ++Q A NLK V+LELGGKS IV
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQ-GAAGNLKRVSLELGGKSANIVFA 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D A A +F+NQGQ C AGSR VHES+YD+F+E+ +LA GDP
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 444
Q GP + QF+++L Y+ G + GA+L TGG+R GA+G++++PT+F V +M IA++E
Sbjct: 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEE 357
Query: 445 IFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 504
IFGPV S+++++D +E ++ +N ++YGLAAGV+T +L A+ + AL+ G+VWIN ++ F
Sbjct: 358 IFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRF 417
Query: 505 DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
D PFGGYKQSG GRE G +L Y +VK+V L
Sbjct: 418 DPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVNL 453
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 529 bits (1364), Expect = 0.0
Identities = 208/456 (45%), Positives = 296/456 (64%), Gaps = 7/456 (1%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+P TG+V+ V EG A +V+ AV+AA++AF W RM+ ER++I+ + ADL+E
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DE+A LE+ D GKP + ++P FR++A + ++ G + P DG L +P+
Sbjct: 59 DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GVAG I PWN PL++ WK+ PALA GNT+VLK +E TPL+A +++L +EAGLPPGV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G+GP AGAAL +H +VD ++FTG T TG+ +++ AA NLKPV+LELGGK+P IV
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D+A + A + F N G+ C AGSR V S+YD+F+E+ A VGDP
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLI 440
+ GP I E EK+L Y+ GA + TGG R GY+++PTV TG+ +D +
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRV 357
Query: 441 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 500
A++EIFGPV +++ + D +E I+ +N + YGLAA V+T +L A+ + R L G+VW+NC
Sbjct: 358 AQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNC 417
Query: 501 FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+ V D PFGG K SG GRE G YSL Y ++K V
Sbjct: 418 WLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 521 bits (1345), Expect = 0.0
Identities = 211/477 (44%), Positives = 293/477 (61%), Gaps = 13/477 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
ING++V + G+ F +P G V+ + AEDV+ AV AA +AF W + +
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT--WGKTSV 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + AD +E + + +A ET DNGKP ++ ++P+ FRY+AG +G
Sbjct: 60 AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ D HEP+GV GQIIPWNFPLLM AWK+ PALA GNT+VLK A QTPLS
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L + +L+ + LP GV+N+V+G+G AG LASH + KLAFTGSTT G++++Q AA+ N
Sbjct: 180 LVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237
Query: 307 LKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
L PVTLELGGKSP I +DA D D AE FNQG+ C SR V ES+YD
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 419
+F+E+A VG+P G Q+ +Q EKIL Y+ G + GA++ TGGERL
Sbjct: 298 EFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTL 357
Query: 420 --GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477
KGY+ +PT+ G +DM I ++EIFGPV +++ +KD +E I +N ++YGL GV+
Sbjct: 358 GGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVW 417
Query: 478 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534
T +++ A + R ++ G VW+NC+ + A PFGGYK+SG GRE L +Y Q K
Sbjct: 418 TRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 513 bits (1323), Expect = e-180
Identities = 204/452 (45%), Positives = 272/452 (60%), Gaps = 5/452 (1%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P TG+VI V + A D + A+ AA AF W + TA ER+ I+ R+ADL+ +
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFKT--WRKTTARERAAILRRWADLIRERAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPI 204
++A L T + GKP + A+ EV ++A A +I G T P+ P + + +P+
Sbjct: 60 DLARLLTLEQGKPLAE-ARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV I PWNFP M K+ PALA G T+VLK AE+TPLSAL +++L EAGLP GVLN
Sbjct: 119 GVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V+G G AL + V K++FTGST GK+++ AA +K V+LELGG +PFIV +
Sbjct: 179 VVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFD 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+DKA + A + F N GQ C +R +VHES+YD+FVEK K VG+ G
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 444
GP I+ EK+ + V GAK+ TGG+RLG GY+ +PTV T V DDMLI +E
Sbjct: 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEE 357
Query: 445 IFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 504
FGPV I+ + DEVI R+N + YGLAA VFT +L A + AL G V IN +
Sbjct: 358 TFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS 417
Query: 505 DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
DA PFGG K+SG GRE G L YL+ K V
Sbjct: 418 DAEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 511 bits (1319), Expect = e-178
Identities = 209/474 (44%), Positives = 290/474 (61%), Gaps = 8/474 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L I+G +V++ SG+TF ++P TG+V+ V DV AV++A++ W MTA
Sbjct: 8 SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKI--WAAMTA 65
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ERS+I+ R D+L NDE+AALET D GKP ++++ ++ + YYAG A ++G
Sbjct: 66 MERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEG 125
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
P G V T EP+GV I WN+P+ + WK PALA GN ++ K +E TPL+A
Sbjct: 126 EQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L ++++ EAGLP GV N+V G G GA L H ++ K++FTG TGK V+ AA S
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS- 243
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
LK VT+ELGGKSP IV +DAD+D+AA++A A F++ GQ C G+R FV +S+ F +
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEAR 303
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAK 422
+ +GDP GP + +K+L YI G GA+L GGERL A
Sbjct: 304 LLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFAN 363
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482
G ++ PTVFT DDM I ++EIFGPV S+L + D DEVI R+N ++YGLAAGVFT +L
Sbjct: 364 GAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLS 423
Query: 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
A+ ++ L G WIN + A +P GGYKQSG GRE G +L +Y Q+K+V
Sbjct: 424 RAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 510 bits (1314), Expect = e-178
Identities = 219/477 (45%), Positives = 313/477 (65%), Gaps = 6/477 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
QL ING+FVD+ GKT+ T++P G VI V+ EDV+RAV+AA++AF+ G W +M
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +++ R ADL+E H +E+A +E+ D+G + + +T V M+ + FRY+AGW DKIQ
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 125
Query: 186 GLTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
G T P + P TL EPIGV G +IPWN+PL+M AWK+ LA GNT+VLK A+
Sbjct: 126 GKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQV 185
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL ++L +AG P GV+NI+ G G G L+ H +V KL FTGST GK +++
Sbjct: 186 TPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A SNLK V+LELGGKSP I+ D D+DKA + ++FFN+G+ C A R FV ES++D
Sbjct: 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHD 305
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+FV + K +GDP GPQ +K+++Y GV GA L GG+++
Sbjct: 306 EFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDR 365
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTH 479
G++ +PTVFT V+D M IAK+E FGP+ I K+ D+D V+QR+N ++YGLA+GVFT
Sbjct: 366 PGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTK 425
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+++ A + L G+V++N ++ D A PFGG+KQSG G++ G +L+ YL+ K V
Sbjct: 426 DINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 503 bits (1297), Expect = e-176
Identities = 205/458 (44%), Positives = 276/458 (60%), Gaps = 12/458 (2%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
DP TG+V +A G A DV+RAV AAR+AF E W R++ ER +++LR A L+ H D
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAF-ESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIG 205
E+A LE+ D GKP Q A+ +V R F YY G ADK+ G T P Y V T+ EP G
Sbjct: 61 ELARLESLDTGKPLTQ-ARADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHG 119
Query: 206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
V G IIPWN+PL + V PALA GN +V+K AE PL+AL +++L EAGLP G LN+
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 266 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325
V+G G AGAAL +H VD ++FTGS TG V++ AA+ N+ PVTLELGGKSP IV D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFAD 238
Query: 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385
AD++ A + A+ N GQ C AGSR VH S+YD+ +E+ VG P
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG-PGLEDPD 297
Query: 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAK 442
GP I ++Q +++ ++ GA++ GG A GY++ PT+ V D +A+
Sbjct: 298 LGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQ 357
Query: 443 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 502
+EIFGPV +++ + D E I +N + YGL AGV+T + D A + R LR G V++N +
Sbjct: 358 EEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNY- 416
Query: 503 VFDAA---IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
+PFGG K+SG GREKG +L NY Q K V
Sbjct: 417 -GAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 496 bits (1280), Expect = e-173
Identities = 203/474 (42%), Positives = 274/474 (57%), Gaps = 13/474 (2%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G +V A +T ++P T +VI V G A DV+RAV+AAR+AF W +
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVE 58
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ ++ R A+ E DE+A T + G P + +V + R A +
Sbjct: 59 ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFE 118
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
G V + EPIGV G I PWN+PL KV PALA G T+VLK +E PLSA+
Sbjct: 119 ERR--GNSLV--VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAI 174
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++++L EAGLP GV N+V+G GP G AL++H +VD ++FTGST GK V + AA + +
Sbjct: 175 ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-V 233
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K V LELGGKS I+ +DAD++KA A F N GQ C A +R V S Y + E A
Sbjct: 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIA 293
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGAKG 423
A A VVGDP GP + QF+++ YI+ G++ GA+L GG E L +G
Sbjct: 294 AAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGL-ERG 352
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
Y++KPTVF V DM IA++EIFGPV SI+ Y D DE I +N + YGLA V++ + +
Sbjct: 353 YFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPER 412
Query: 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
A + R LR G V IN F+ PFGGYKQSG GRE G Y L +L+VK++
Sbjct: 413 ARAVARRLRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 487 bits (1256), Expect = e-169
Identities = 212/478 (44%), Positives = 298/478 (62%), Gaps = 8/478 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L ING++V +SG+T + +P G+ ++ + + DV+RAV AA++AF W + T
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKT--WRKTTV 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + AD+++ + + +A +ET DNGKP ++ ++P+ FRY+AG +G
Sbjct: 60 AERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
D L EPIGV GQIIPWNFP LM AWK+ PALA GNT+V+K + T LS
Sbjct: 120 SANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSL 179
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L ++K++ + LP GV+NIV+G G +G L +H +DKLAFTGST G+ V AAK
Sbjct: 180 LELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
L P TLELGGKS I+ +DA+ DKA E A + FNQGQ CCAGSR FV E +YD+FV K
Sbjct: 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAK 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AK 422
VG+P Q G Q++ +Q +KIL Y+ + GAK+ TGG RL K
Sbjct: 298 LKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDK 357
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482
G++I+PT+ V +DM +A++EIFGPV +++K+K DEVI +N S+YGL GVFT +++
Sbjct: 358 GFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDIN 417
Query: 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
A + RA+ G VW+N ++ A PFGGYK+SG GRE L Y Q+K + L
Sbjct: 418 RALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYIDL 475
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 486 bits (1252), Expect = e-169
Identities = 208/457 (45%), Positives = 278/457 (60%), Gaps = 10/457 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG+V+ V AEDV+ AV +A+ A E W + ER +I+ + ADLL N
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DEIA LET DNGKP E A+ ++ + YYAG A + G P G T EP+
Sbjct: 59 DEIARLETIDNGKPIE-EARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV I WN+P+ + +WK PALACGN +V K + TPL+AL ++++L EAGLP GV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G G T G L H +V K++FTGS TGK V+ AAK +K VTLELGGKSP I+ +
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD++ A A A F +QGQ C G+R FV S+ D+F E+ K +GDP
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDML 439
Q G I E EK+L YI S GAK+ GGER+ G+Y+ P V T DDM
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMT 355
Query: 440 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 499
I ++EIFGPV SIL + +EVI+R+N + YGLAAGVFT +L A+ ++ L+ G+ WIN
Sbjct: 356 IVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWIN 415
Query: 500 CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+++ +PFGGYKQSG GRE G+ +L +Y Q+K V
Sbjct: 416 TYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 481 bits (1240), Expect = e-167
Identities = 212/451 (47%), Positives = 290/451 (64%), Gaps = 4/451 (0%)
Query: 88 PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
P G V+ AEG EDV+ AV+AARKAFD+GPWPRM+ ER+ ++L+ ADL+ + +
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGV 206
A +ET ++GKP Q A+ E+ L+RY A A + G + G + L EPIGV
Sbjct: 64 ALIETLESGKPISQ-ARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGV 122
Query: 207 AGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266
G I PWNFP L+ + K+ ALA G T+V+K +E T + L +++LL EAGLP GV+NIV
Sbjct: 123 VGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIV 182
Query: 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
+GYG T G A+ H +VD ++FTGST GK + AA+ NLK V+LELGGK+P IV DA
Sbjct: 183 TGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADA 241
Query: 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386
D+D AA+ + ++FN G+CC +GSR VHES+ D FV A + K VGDP +
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEI 445
G I+ Q KI Y+ +G GA L GGERL A G + +PT+FT V DM IA++EI
Sbjct: 302 GAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEI 361
Query: 446 FGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD 505
FGPV S+L + +DE I +N + YGL+AGV++ ++DTA T+ R +R G+VW+N F
Sbjct: 362 FGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGS 421
Query: 506 AAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+PFGG+KQSG GRE G Y + Y ++K V
Sbjct: 422 PELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 475 bits (1225), Expect = e-164
Identities = 201/471 (42%), Positives = 282/471 (59%), Gaps = 8/471 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING+FV S+SG+T L+P TG+V+ V AED +RAV AA A W R+ A ER
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIER 59
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ + + ADL+ + DE+A L + GK A+ EV T Y A WA +I+G
Sbjct: 60 AAYLRKLADLIRENADELAKLIVEEQGKTLSL-ARVEVEFTADYIDYMAEWARRIEGEII 118
Query: 190 PADGPY-HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248
P+D P ++ PIGV I+PWNFP + A K+ PAL GNTIV+K +E+TPL+AL
Sbjct: 119 PSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
++L+ EAGLP GVLNIV+G G G AL +H +V ++ TGST G+ +++ AA+ N+
Sbjct: 179 FAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NIT 237
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
V+LELGGK+P IV +DAD+D A + + N GQ C R +VHE +YD+F+EK
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLV 297
Query: 369 ALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIK 427
VGDPF GP ++ +K+ + + V+ GA L TGG+R G KGY+ +
Sbjct: 298 EKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYE 357
Query: 428 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 487
PTV T V+ DM I ++EIFGPV ++K+ LDE I+ +N S+YGL + ++T NL+TA
Sbjct: 358 PTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRA 417
Query: 488 MRALRVGSVWINCFDVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAVV 537
L G +IN + F+A F G+K+SG G G + L YLQ K V
Sbjct: 418 TNELEFGETYINREN-FEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 475 bits (1223), Expect = e-164
Identities = 202/469 (43%), Positives = 293/469 (62%), Gaps = 7/469 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V+ ++G T ++P G+VI V EDV RA++AAR+A E W M+ ER
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGE--WAAMSPMER 59
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+I+ R ADL+ N+E+A LET D GK +++ ++ +F ++AG A + G
Sbjct: 60 GRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEII 119
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
P GP T+ EP+GV I WN+PL + +WK+ PALA GN +V K +E TPL+AL V
Sbjct: 120 PLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
++++ EAGLP GV N+V G G G L +H +V K++FTG TGK ++ AA +LK
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMA-AAAGHLKH 238
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
VT+ELGGKSP IV +DAD++ A + A FF+ GQ C G+R FVH+ + ++F+ +
Sbjct: 239 VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVE 298
Query: 370 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYY 425
+ +GDPF + GP I + +K+L YI G GA L TGG R G++
Sbjct: 299 RTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFF 358
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485
++PTVF DDM I ++EIFGPV ++L + D DEVI R+N ++YGLA GVFT +L A+
Sbjct: 359 VEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAH 418
Query: 486 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534
+ L G+VWIN ++++ A PFGGYKQSG GRE G +L++Y +VK
Sbjct: 419 RVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 471 bits (1215), Expect = e-163
Identities = 196/475 (41%), Positives = 270/475 (56%), Gaps = 10/475 (2%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I G++V + +T + P T +V+ V E DV+ AV+AAR+AFD GPWPR++
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK---I 184
ER+ ++ R AD LE DE+A L T +NG P S + + P L RYYA A
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ G V EP+GV I+PWN PL + A K+ PALA G T+VLK + +TPL
Sbjct: 121 ERRPGSGGGHVLV--RREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPL 178
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A +++ EAGLPPGV+N+V G L H VDK++FTGST G+ + +
Sbjct: 179 DAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG- 236
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
L VTLELGGKS IV +DAD+D A A N GQ C A +R V S YD+ V
Sbjct: 237 ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVV 296
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--K 422
E A VGDP Q GP + Q E++ YI G GA+L TGG R +
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDR 356
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482
G++++PT+F V +DM IA++EIFGPV S++ Y D D+ ++ +N S YGL+ V+T +++
Sbjct: 357 GWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVE 416
Query: 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
+ R +R G+V +N F + D PFGG+KQSG GRE G L YL+ K++
Sbjct: 417 RGLAVARRIRTGTVGVNGFRL-DFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 464 bits (1197), Expect = e-160
Identities = 189/473 (39%), Positives = 276/473 (58%), Gaps = 7/473 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T+LLING+ V G+ P +P TG+V+ +AE A V+ AV+AA AF E W + T
Sbjct: 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQTT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER++ +L+ AD +E + DE A LE+ + GKP + E+P +FR++AG A ++
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 186 GLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G A H + +P+GV I PWN+PL+M AWK+ PALA GNT+VLK +E TPL
Sbjct: 120 GKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPL 179
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL +++L + LPPGVLN+V+G G T G AL H +V ++ TGS TGK VL AA
Sbjct: 180 TALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
S +K LELGGK+P IV +DAD+D E ++N GQ C A R + +YD V
Sbjct: 239 S-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLV 297
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKG 423
K A VGDP + GP I + +++ ++ R+ G ++ TGGE KG
Sbjct: 298 AKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKG 357
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
YY +PT+ G + D I + E+FGPV S+ + D D+ ++ +N S YGLA+ V+T ++
Sbjct: 358 YYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGR 417
Query: 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
A+ + L+ G W+N + + +P GG KQSG G++ Y L +Y V+ V
Sbjct: 418 AHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 462 bits (1190), Expect = e-159
Identities = 208/460 (45%), Positives = 281/460 (61%), Gaps = 10/460 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P T I + AEDV+ AV AAR+AF W + T ER+K + A+ +
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTL 200
+E+A LE DNGKP ++ A +V F YYA A+++ A + +
Sbjct: 59 EELAELEARDNGKPLDE-AAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP+GV G I PWNFPLLM AWKV PALA G T+VLK +E T L+ L ++++ EAGLPP
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
GVLN+V+G G AGA LA+H +DK++FTGST TG V+Q AA+ ++KPV+LELGGKSP
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV +DAD++KA E A + F+N GQ C A SR VHES+ D F+E+ A VGDP
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296
Query: 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGAKGYYIKPTVFTGVKDDM 438
+ G++ GP + Q+EK+L +I G + GA+L GG R KGY+I PTVF V D
Sbjct: 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDS 356
Query: 439 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 498
I ++EIFGPV + + DE I +N S+YGLAA V + + + + + AL G VWI
Sbjct: 357 RIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWI 416
Query: 499 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
NC P+GGYK+SG GRE G + L NYL+VK +
Sbjct: 417 NCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 461 bits (1189), Expect = e-159
Identities = 190/461 (41%), Positives = 262/461 (56%), Gaps = 13/461 (2%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P T +VI + A DV+ A++AAR+AFD G W A ER++ + + + LE +
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARKE 60
Query: 146 EIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPAD--GPYHVQ 198
E+ AL + G P ++ Q + P+ RY+A AD L PA GP
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGH--LRYFADLADSFPWEFDLPVPALRGGPGRRV 118
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
EP+GV I PWNFP + K+ PALA GNT+VLK A TPLSAL + +++ E L
Sbjct: 119 VRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDL 178
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P GV+N+V+G G AL + VD ++FTGST G+ ++ AA + LK V LELGGKS
Sbjct: 179 PAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKS 237
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
IV +DAD+ AA A N GQ C +R V S YD+ VE A VGD
Sbjct: 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGD 297
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGVKD 436
P G GP I + Q +++ YI G D GA+L TGG R KG+Y++PT+F V +
Sbjct: 298 PADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDN 357
Query: 437 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 496
DM IA++EIFGPV ++ Y D DE ++ +N S YGL+ GV++ ++D A + R +R GSV
Sbjct: 358 DMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSV 417
Query: 497 WINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
IN + PFGGYKQSG GRE G L +L+ K++
Sbjct: 418 GINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 456 bits (1175), Expect = e-158
Identities = 193/429 (44%), Positives = 241/429 (56%), Gaps = 66/429 (15%)
Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
AAR AF W + ER+ I+ + ADLLE +E+AALET + GKP + A EV
Sbjct: 2 AARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARA 58
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229
FRY AG ADK+ G P+ P EP+GV G I PWNFPLL+ AWK+ PALA
Sbjct: 59 IDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118
Query: 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289
GNT+VLK +E TPL+AL +++LL EAGLPPGV+N+V G G GAAL SH VDK++FT
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFT 178
Query: 290 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349
GST GK +++ AA+ NLKPVTLELGGKSP IV EDAD+D A E A + FFN GQ C A
Sbjct: 179 GSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237
Query: 350 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 409
SR VHES + D F
Sbjct: 238 ASRLLVHES-----------------IYDEFV---------------------------- 252
Query: 410 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 469
E+L TV V DM IA++EIFGPV ++++KD +E I +N ++
Sbjct: 253 -------EKLV--------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTE 297
Query: 470 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLS 528
YGL AGVFT +L+ A + LR G+V+IN + PFGG K SG GRE G Y L
Sbjct: 298 YGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLE 357
Query: 529 NYLQVKAVV 537
Y + K VV
Sbjct: 358 EYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 455 bits (1172), Expect = e-157
Identities = 195/454 (42%), Positives = 270/454 (59%), Gaps = 6/454 (1%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+DP TG+ I V + A DV+ AV+AA AF W R T ERSK +L+ AD +E + +
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPI 204
E+AALE+ + GKP E+P FR++AG A ++G A P H + EPI
Sbjct: 60 ELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPI 119
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV QI PWN+PL+M AWK+ PALA GNT+VLK +E TPL+ L +++L E LPPGV+N
Sbjct: 120 GVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G G +AG AL +H V ++ TGS TGK V + AA LK V LELGGK+P IV +
Sbjct: 179 VVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFD 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D A A ++N GQ C A R +VHESVYD+FV VGDP
Sbjct: 238 DADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 444
+ GP + Q E++ ++ A++ TGG R GY+ +PTV GV D I ++E
Sbjct: 298 EMGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEE 356
Query: 445 IFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 504
IFGPV ++ + D DE I+ +N +YGLA+ V+T ++ A L L G+VW+N
Sbjct: 357 IFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPL 416
Query: 505 DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
A +P GG+KQSG G++ Y+L +Y ++K V+
Sbjct: 417 AAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 454 bits (1171), Expect = e-156
Identities = 210/464 (45%), Positives = 290/464 (62%), Gaps = 14/464 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
ING++V + K+FPT++P TG+V+ V + E EDV+ AV+AAR AF+ W + +
Sbjct: 24 HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGH 81
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ + R A +++H A LE+ DNGKP +S ++P+ R F ++AGWA +
Sbjct: 82 VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD-- 139
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
T A +P+GV GQI+PWNFPLLM AWK+ PALA GNT+VLK AE TPL+AL
Sbjct: 140 TELAG--------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+++ EAGLPPGVLNIV+G G G+ALA+H VDK+AFTGST G+ + + A +
Sbjct: 192 LFAEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGSTEVGRALRRATAGTG- 249
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K ++LELGGKSPFIV +DAD+D A E A++FNQGQ CCAGSR V ESV ++ + K
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 427
VGDP I G +D Q ++I + + G GA + G L +KG +
Sbjct: 310 KERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYP 369
Query: 428 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 487
PT+FT V IA++EIFGPV +L ++ E + +N + YGLAA V++ NL A +
Sbjct: 370 PTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEV 429
Query: 488 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 531
+L+ G VWIN ++FDAA FGGY++SG GRE G L YL
Sbjct: 430 ALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 444 bits (1145), Expect = e-152
Identities = 198/474 (41%), Positives = 274/474 (57%), Gaps = 12/474 (2%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G++V G+ +P T DV+ A AED + A++AA AF W R +
Sbjct: 4 YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPE 59
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R+ I+ + D LE +E+A L T + GK + A+ EV ++FRYYAG A ++ G
Sbjct: 60 ARADILDKAGDELEARKEELARLLTREEGKTLPE-ARGEVTRAGQIFRYYAGEALRLSGE 118
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P+ P V+T EP+GV G I PWNFP+ + AWK+ PALA GNT+V K AE TP SA
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+ ++L EAGLP GV N+V G G G AL H +VD ++FTGST G+ + AA +
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA-AR 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
V LE+GGK+P +V +DAD+D A E A FF+ GQ C A SR V E ++D+FVE
Sbjct: 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGY 424
VGD G+ GP + Q EK L+YI GAKL GGERL +GY
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484
Y+ P +F GV +DM IA++EIFGPV ++++ +D DE + +N +++GL+AG+ T +L A
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHA 417
Query: 485 NTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 536
R + G V +N D +PFGG K S G RE+G +L Y +K V
Sbjct: 418 THFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 442 bits (1139), Expect = e-152
Identities = 193/454 (42%), Positives = 253/454 (55%), Gaps = 14/454 (3%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P TG+V +++AV+AA+ AF W ER +L AD +E + +
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--DKIQGLTAPADGPYHVQTLHEP 203
E+A L T + GKP + AQ EV RY A D++ V+ +P
Sbjct: 60 ELARLLTLEQGKPLAE-AQFEVGGAVAWLRYTASLDLPDEVIEDDDTR----RVELRRKP 114
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV I+PWNFPLL+ AWK+ PAL GNT+VLK + TPL L + +L E LPPGVL
Sbjct: 115 LGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVL 173
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+VSG G G AL SH ++ K++FTGST TGK V+ AAK LK VTLELGG IV
Sbjct: 174 NVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVL 231
Query: 324 EDADVDKAAE-LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
D D+D A L A F N GQ C A R +VHES+YD+F E ALA VVGD
Sbjct: 232 PDVDIDAVAPKLFWGA-FINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDP 290
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 442
G GP + Q++K+ + + GAK+ GGE L GY+I PT+ + I
Sbjct: 291 GTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVD 350
Query: 443 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 502
+E FGPV +LKY D DEVI R+N S+YGL A V++ +L+ A + R L G+VWIN
Sbjct: 351 EEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHG 410
Query: 503 VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
D PFGG+KQSG G E G L Y Q + +
Sbjct: 411 ALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 442 bits (1138), Expect = e-151
Identities = 204/481 (42%), Positives = 284/481 (59%), Gaps = 18/481 (3%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I G++V G+ F + P TG V V AED+ A+ AA A + W + + ER
Sbjct: 5 IGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAER 62
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ I+ + AD +E + + +A ETWDNGKP ++ ++P+ FRY+AG +G +
Sbjct: 63 ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSIS 122
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
D HEP+GV GQIIPWNFPLLM WK+ PALA GN +VLK AEQTP S L +
Sbjct: 123 EIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVL 182
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
+L+ + LPPGV+N+V+G+G AG LAS + K+AFTG TTTG++++Q A++ N+ P
Sbjct: 183 MELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-NIIP 240
Query: 310 VTLELGGKSPFIVCE------DADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQ 362
VTLELGGKSP I DA DKA E + +F NQG+ C SR + ES+YD+
Sbjct: 241 VTLELGGKSPNIFFADVMDADDAFFDKALE--GFVMFALNQGEVCTCPSRALIQESIYDR 298
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---- 418
F+E+A G+P G Q EQ EKIL YI G + GA++ TGGER
Sbjct: 299 FMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELG 358
Query: 419 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 478
G Y PT F G + M I ++EIFGPV ++ +KD +E ++ +N + YGL AGV+T
Sbjct: 359 GLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWT 417
Query: 479 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
+ +TA + R ++ G VW NC+ ++ A FGGYKQSG GRE L +Y Q K ++
Sbjct: 418 RDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV 477
Query: 539 A 539
+
Sbjct: 478 S 478
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 442 bits (1138), Expect = e-151
Identities = 208/499 (41%), Positives = 284/499 (56%), Gaps = 15/499 (3%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
I P + QL I G++ + GK P ++P T + I + AEDV+ AV AARKA
Sbjct: 2 AIPVPRR----QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKA 57
Query: 116 FDE---GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR 172
F W R T R+K + A + E+A LET D GKP +++A +
Sbjct: 58 FKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAG- 116
Query: 173 LFRYYAGWADKIQGL-TAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228
F YYA A+ + AP P + L EP+GV G I PWN+PLLM WKV PAL
Sbjct: 117 CFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPAL 176
Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
A G T VLK +E ++ L ++ + E GLPPGVLN+V+G G AGA LASH VDK+AF
Sbjct: 177 AAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAF 236
Query: 289 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348
TGST TG+ ++ AA+ +KPV+LELGGKSP IV +D D+DKA E A + F+ GQ C
Sbjct: 237 TGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICS 295
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 408
A SR VHE + +F+EK A + DP + G + GP + Q+EK+LK+I +
Sbjct: 296 ATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSE 355
Query: 409 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 466
GA + GG+R KG++I+PT+ T V M I ++E+FGPV + + DE I+ +N
Sbjct: 356 GATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELAN 415
Query: 467 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 526
S YGLA V +++L+ + A + G VWINC P+GG K+SG GRE G +
Sbjct: 416 DSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWG 475
Query: 527 LSNYLQVKAVVTALKNPAW 545
L NYL VK V + + W
Sbjct: 476 LENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 430 bits (1108), Expect = e-147
Identities = 202/484 (41%), Positives = 289/484 (59%), Gaps = 13/484 (2%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G+FV S SG+TF TL P T +V+ VA G A DV+RA AA++AF W + A
Sbjct: 3 HFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKAA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER + + + ADL+E+H DEIA LE D G+P Q+ Q +V FR++A + + G
Sbjct: 61 ERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ-QVIRAAENFRFFADKCEEAMDG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P D + T+ P+G G I PWN P ++ WK+ PALA GNT+VLK AE +PL+A
Sbjct: 120 RTYPVDTHLNY-TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
++++ EAGLP GV N+V G+G AG AL +H +V ++FTG T TG I+++ A +
Sbjct: 179 ARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT- 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
LK ++ELGGKSP IV +DAD+++A + + +F G+ C A SR V ES+ + FVEK
Sbjct: 238 LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEK 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA----- 421
VG P + GP I E K+L Y+ + GA + GGER
Sbjct: 298 LVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGED 357
Query: 422 --KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
+G Y+ PTVFTG + M IA++EIFGPV +++ +KD +E I+++N ++YGLA V+T+
Sbjct: 358 LGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTN 417
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539
++ A+ + AL G +W+N +V PFGG K SG GRE G+YS Y + K V A
Sbjct: 418 DVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALA 477
Query: 540 LKNP 543
L
Sbjct: 478 LGPH 481
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 429 bits (1105), Expect = e-146
Identities = 194/477 (40%), Positives = 288/477 (60%), Gaps = 3/477 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L ING++ +A +TF T+DP T + +A G++ D++RAVSAAR F+ G W +
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R ++ + ADL+E H +E+A LET D GKP S + ++P R R+YA DK+
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G A + EP+GV I+PWNFPLL+ WK+GPALA GN+++LK +E++PLS
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A+ ++ L EAGLP GVLN+V+G+G AG AL+ H ++D +AFTGST TGK +L+ A S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259
Query: 306 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
N+K V LE GGKS IV D D+ +AA +F+NQGQ C AG+R + ES+ D+F+
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
A G P G ID + + +IR G G L G R
Sbjct: 320 ALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDG--RNAGLAA 377
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484
I PT+F V + ++++EIFGPV + ++ ++ +Q +N SQYGL A V+T +L A
Sbjct: 378 AIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRA 437
Query: 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541
+ + R L+ GSV++N ++ D +PFGGYKQSG GR+K ++L + ++K + +L+
Sbjct: 438 HRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLE 494
|
Length = 494 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 415 bits (1070), Expect = e-141
Identities = 205/464 (44%), Positives = 273/464 (58%), Gaps = 19/464 (4%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG VI V A DV+RAV+AA+ AF W A ER K++ R AD LE +
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEP 203
+E+A L + G A+ E + LFRY+ G A +++G T P GP + T+ EP
Sbjct: 59 EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREP 117
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV G I+PWN PL++ A K+ PAL GNT+VLK AE PL+ L ++++L + LP GVL
Sbjct: 118 LGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVL 176
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+++GYG GAAL H +VDK+ FTGST GKI+ + AA L PV+LELGGKSP IV
Sbjct: 177 NVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF 235
Query: 324 EDADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
DAD+D A + A + F QGQ C AGSR FVHE +YD F+EK A K +GDP
Sbjct: 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDE 295
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG----ERLGAKGYYIKPTVFTGVKDD 437
G I +QF K+ YI G+ GA + GG E A G++++PT+F+GV ++
Sbjct: 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNE 355
Query: 438 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 497
+A++EIFGPV + +KD DEVI +N S YGLAA V+T +L A AL G V
Sbjct: 356 WRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQ 415
Query: 498 INCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL----QVKAVV 537
+N +GG+KQSG GRE SL L Q K V
Sbjct: 416 VNQGGGQQPGQSYGGFKQSGLGRE---ASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 408 bits (1051), Expect = e-138
Identities = 185/457 (40%), Positives = 265/457 (57%), Gaps = 10/457 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG V+ V A DV+RAV+AAR AF E W T ER++++ A L H
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
+E+A ++ D G P + +V + L Y+AG +++G T P G TL EP
Sbjct: 59 EELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV +I+ +N PL+ A K+ LA GNT+V+K EQ PLSAL +++L E LPPGV N
Sbjct: 118 GVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFN 176
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
I+ G G TAGAAL H +V ++A GS TG+ +++ AA+ +K VTLELGGK+ IV
Sbjct: 177 ILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFP 235
Query: 325 DADVDKAAELAHYALFFN-QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383
DAD + AA+ A + F GQ C + SR FVHES+YD+ + + VGDP
Sbjct: 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295
Query: 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGYYIKPTVFTGVKDDML 439
GP + +Q+++++ YI S GA+L TGG R G+Y++PTVF V M
Sbjct: 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMR 355
Query: 440 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 499
IA++EIFGPV S+L+++D E++ ++N +YGL A ++T+++ A+ R + G VWIN
Sbjct: 356 IAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWIN 415
Query: 500 CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
PFGG K SG GRE+ L +Y Q K V
Sbjct: 416 GSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 408 bits (1051), Expect = e-138
Identities = 195/475 (41%), Positives = 273/475 (57%), Gaps = 9/475 (1%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G+ V S K +P T VI VA DV+ AV++A +AF W + T
Sbjct: 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-SAWAKTTPA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER +I+LR ADL+E+H +E+A LET +GK S EV + RY+AGWA KI G
Sbjct: 61 ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE 120
Query: 188 T------APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
T + Y T EP+GV I+PWNF +++ WK+G ALA G TIV+K +E
Sbjct: 121 TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+ L V++L EAG+P GVLN+V+G G GA L SH +V K++FTGS TGK + +
Sbjct: 181 TPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKIGRQ 239
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA S+L VTLELGGK+ +DAD+D E A F +QGQ C A R +VH S +D
Sbjct: 240 AA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+ V K VG P + GP + F+K+ Y+ G ++ GGE L
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG 358
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
+GY+++PT+ D + ++E FGPV S + Y+D +E+IQ N + +GL A V+T+NL
Sbjct: 359 EGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNL 418
Query: 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
A + + G+VW+N D A+PFGG KQSG GRE GS + +Y ++K+V
Sbjct: 419 SKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 407 bits (1048), Expect = e-138
Identities = 195/463 (42%), Positives = 262/463 (56%), Gaps = 19/463 (4%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+ P G+VI V EDV +A++AA++ E + AYER++I+ R A LLE
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMK--SLPAYERAEILERAAQLLEE 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ---- 198
+E A + GKP + A+ EV R A A ++ G T P D +
Sbjct: 59 RREEFARTIALEAGKPIKD-ARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIG 117
Query: 199 -TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
T+ EPIGV I P+NFPL + A KVGPA+A GN +VLK A QTPLSAL +++LL EAG
Sbjct: 118 FTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAG 177
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
LP G LN+V+G G T G AL + V ++FTGS G+ +A K+ LK VTLELG
Sbjct: 178 LPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEA---IARKAGLKKVTLELGSN 234
Query: 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
+ IV DAD++KA E F N GQ C + R FVHE +YD+F+E+ A K VVG
Sbjct: 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVG 294
Query: 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 437
DP GP I + E+I +++ V+GGA+L TGG+R GA ++PTV T V D
Sbjct: 295 DPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPPD 351
Query: 438 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 497
M + +E+F PV S+ + LDE I +N S YGL AGVFT++L A R L VG V
Sbjct: 352 MKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVM 411
Query: 498 INCFDVFDA---AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
IN D +P+GG K+SG GRE Y++ ++K V
Sbjct: 412 IN--DSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 403 bits (1038), Expect = e-137
Identities = 174/436 (39%), Positives = 242/436 (55%), Gaps = 10/436 (2%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV+RA +AA A W ER+ I+ + A++LE DEIA ++G A
Sbjct: 1 DVDRAYAAAAAAQKA--WAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTR-PKA 57
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAW 222
EV + R AG + +G P+D P P+GV G I P+NFPL++
Sbjct: 58 AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMR 117
Query: 223 KVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 281
V PALA GN +VLK +TP++ L ++++ EAGLP GVLN+V G G G AL H
Sbjct: 118 SVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHP 177
Query: 282 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
V ++FTGST G+ + +LA + +LK V LELGG +P IV +DAD+D A A + F
Sbjct: 178 RVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
+QGQ C A R VHESVYD+FVEK A A VGDP GP I+ Q +++
Sbjct: 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAI 296
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461
+ V GA+L TGG +G + +PTV + V DM I ++EIFGPV ++ + D +E
Sbjct: 297 VEDAVAAGARLLTGGT---YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEA 353
Query: 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGR 520
++ +N ++YGL+A VFT +L+ A L G V IN V D +PFGG K SG GR
Sbjct: 354 VELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGR 413
Query: 521 EKGSYSLSNYLQVKAV 536
G SL + + + +
Sbjct: 414 FGGPASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 404 bits (1040), Expect = e-136
Identities = 200/476 (42%), Positives = 291/476 (61%), Gaps = 12/476 (2%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I G++VDSASG+TF + +P +V+ A DV+ AV AAR+AF E W ++ A
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPAP 59
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ + R A+LL++ +E+A L T + GKP + + +V + +Y AG ++ G
Sbjct: 60 RRAEYLFRAAELLKKRKEELARLVTREMGKPLAE-GRGDVQEAIDMAQYAAGEGRRLFGE 118
Query: 188 TAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P++ P T +PIGV I PWNFP+ + +WK+ PAL CGNT+V K AE TP A
Sbjct: 119 TVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L + +L EAGLPPGV+N+V G G G AL H +VD ++FTGST G+ + + A+ N
Sbjct: 179 LKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
K V LE+GGK+P IV +DAD+D A E A ++ F GQ C A SR VHESVYD+F+++
Sbjct: 239 -KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKR 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAK 422
A + VGD GP I+ Q EK+L Y G + GA L GGERL K
Sbjct: 298 FVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEK 357
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482
GY+++PTVFT V DM IA++EIFGPV ++++ L+E I+ +N ++YGL++ ++T +++
Sbjct: 358 GYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVN 417
Query: 483 TANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 536
A R L G ++N + + +PFGG K+SG G RE G+ +L + + KAV
Sbjct: 418 KAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 402 bits (1036), Expect = e-136
Identities = 197/472 (41%), Positives = 282/472 (59%), Gaps = 5/472 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
TQ LI G++ D+ GKTFP +P TG+VI +V + N A+++A AF W ++T
Sbjct: 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERSKI+ R+ DL+ + +++A L T + GKP + A EV Y+A A ++
Sbjct: 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL-KEAIGEVAYGASFLEYFAEEAKRVY 141
Query: 186 G-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G + + L +P+GV G I PWNFPL M KVGPALA G T+V+K +E TPL
Sbjct: 142 GDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPL 201
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL ++L +AG+PPGVLN+V G P G AL + +V K+ FTGST GK ++ AA
Sbjct: 202 TALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+ +K V+LELGG +PFIV +DAD+D A + A + F N GQ C +R V E +YD+F
Sbjct: 262 T-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFA 320
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
E + K VVGD F+ G+ QGP I+ +K+ +++ V GAK+ GG+R G
Sbjct: 321 EAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGT 380
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484
+ +PTV V +DMLI ++E+FGPV + ++K +E I +N ++ GLAA +FT +L A
Sbjct: 381 FYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRA 440
Query: 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+ AL G V +N + PFGG KQSG GRE Y + YL++K V
Sbjct: 441 WRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-132
Identities = 188/479 (39%), Positives = 265/479 (55%), Gaps = 18/479 (3%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING FV SGKTF ++P G VI V E A +V+ AV+AAR A +GPW +MT ER
Sbjct: 5 INGAFV--ESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTVAER 61
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--- 186
+ ++ AD +ER D+ A E D GKP ++ ++P FR +A
Sbjct: 62 ADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF 121
Query: 187 -LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
+ P + +P+GV G I PWN PLL+ WKVGPALACGNT+V+K +E+TP +
Sbjct: 122 EMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A + ++++ G+P GV N+V G+GP +AG L H VD + FTG T TG +++ AA
Sbjct: 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD 241
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+KPV+ ELGGK+ IV D D D A + F N GQ C R +V ++D+FV
Sbjct: 242 G-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFV 300
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-------E 417
A A +G P GP I +E +K+L Y V+ GA + TGG
Sbjct: 301 AALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDA 360
Query: 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477
A G +++PT++TG+ D + +EIFGP I + +EVI +N + YGLAA V+
Sbjct: 361 L--AGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVW 418
Query: 478 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
T +L A+ + R + VG VW+N + + D PFGG K SG GRE G +SL Y ++ V
Sbjct: 419 TEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 390 bits (1004), Expect = e-131
Identities = 185/456 (40%), Positives = 263/456 (57%), Gaps = 9/456 (1%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
F L+P G V VA G +D RA++AA AF W T ER +I+L+ A+++ER
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLH 201
D++ L + G + A E T L R AG +++G T P+D P V ++
Sbjct: 59 RADDLIDLLIDEGGSTY-GKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
P+GV I P+N+PL++ KV ALA GNT+VLK +E+TP+ L +++++ EAGLP G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
V N+V+G G G L V + FTGST G+ + + A + +LK +TLELGGK+P I
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+D A A + F +QGQ C + SR V E VYD+FV+K A A K VGDP
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
GP I Q E+I + + V GAKL TGG+ G + +PTV T V DM I
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIF 353
Query: 442 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 501
++E FGPV S++ KD +E ++ +N ++YGL+A + T++L A L L G V IN
Sbjct: 354 REETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDP 413
Query: 502 DVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+ D A +PFGG K SG GRE G +S+ + ++K +
Sbjct: 414 TILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 390 bits (1003), Expect = e-130
Identities = 181/480 (37%), Positives = 258/480 (53%), Gaps = 17/480 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ V + + + +P +V+ V + E+ AV AAR AF W R
Sbjct: 35 LVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPP 90
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER++++LR A LL R E+AA + GK + + A +V YYA +++G
Sbjct: 91 EERARLLLRAAALLRRRRFELAAWMVLEVGKNWAE-ADADVAEAIDFLEYYAREMLRLRG 149
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ ++ P+GV I PWNFPL + A AL GNT+VLK AE TP+ A
Sbjct: 150 FPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIA 209
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 304
+ ++L EAGLPPGV+N + G G G L H +V +AFTGS G + + AAK
Sbjct: 210 AKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQ 269
Query: 305 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
LK V E+GGK+ IV EDAD+D+AAE + F QGQ C A SR VHESVYD
Sbjct: 270 PGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYD 329
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG- 420
+F+E+ VGDP + GP ID ++I +YI G G +L GGE L
Sbjct: 330 EFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLEL 388
Query: 421 -AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
A+GY+++PT+F V D +A++EIFGPV +++K KD DE ++ +N ++YGL GVF+
Sbjct: 389 AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSR 448
Query: 480 NLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 536
+ + R VG+++ N PFGG+K SG G + G L ++Q K V
Sbjct: 449 SPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 385 bits (990), Expect = e-129
Identities = 177/450 (39%), Positives = 269/450 (59%), Gaps = 6/450 (1%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
+P TG++I V + ++ A+ AA +AF W TA ERS ++ ++ +L+ + D+
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFKT--WRATTAKERSSLLRKWYNLMMENKDD 60
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPIG 205
+A L T +NGKP ++ A+ E+ ++A A ++ G T P+ + + +P+G
Sbjct: 61 LARLITLENGKPLKE-AKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVG 119
Query: 206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
V I PWNFP M K G ALA G T+V+K AEQTPLSAL +++L +AG+P GVLN+
Sbjct: 120 VCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179
Query: 266 VSG-YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
++G G L + V K++FTGST GKI+++ +A + +K V++ELGG +PFIV +
Sbjct: 180 ITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSAST-VKKVSMELGGNAPFIVFD 238
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D+A E A + F N GQ C +R +VH+ +YD+F +K K VG+ G+
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 444
QGP I+ + EK+ K+I V+ GAK+ TGG+R G + +PTV + V DML++K+E
Sbjct: 299 TQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEE 358
Query: 445 IFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 504
FGP+ + K+ D +EVI +N ++ GLAA F+ +L + AL G V IN +
Sbjct: 359 TFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLIS 418
Query: 505 DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534
+ PFGG KQSG GRE Y + YL+ K
Sbjct: 419 NVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 377 bits (969), Expect = e-126
Identities = 185/463 (39%), Positives = 269/463 (58%), Gaps = 16/463 (3%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+P G+VI V E+V A+ A KA D + AY+R KI+++ A+L+ER
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG-PYH----V 197
+E+A L T + GKP +QS + EV T RLF+ A A ++G T P D Y+
Sbjct: 59 RKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117
Query: 198 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
T+ EPIGV G I P+NFP +FA K+ PA+A GN++V+K + TPL+A+ ++K+L EAG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK--SNLKPVTLELG 315
LPPGV+N+V+GYG G + ++ +V+ ++FTGST G L +A+K K V LELG
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVG---LLIASKAGGTGKKVALELG 234
Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
G P IV +DAD+++A +A F N GQ C A R V E VYD+F++ K
Sbjct: 235 GSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLK 294
Query: 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
VGDP GP I E E++ + V+ G K+ GG+R G + PTV
Sbjct: 295 VGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDE--GSFFPPTVLENDT 352
Query: 436 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 495
DM++ K+E+FGPV I K KD +E ++ +N+++YGL A VFT++++ A + R L G
Sbjct: 353 PDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGG 412
Query: 496 VWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
V IN F +PFGG+K+SG GRE Y++ + K +V
Sbjct: 413 VVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-124
Identities = 171/479 (35%), Positives = 249/479 (51%), Gaps = 18/479 (3%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
+I G++V S G+TF + +P G+ I V EDV AV+AAR+AF E W ++ A
Sbjct: 2 VIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAPR 58
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R +I+ + + L + + + L + + GK EV + Y G + + GLT
Sbjct: 59 RGEIVRQIGEALRKKKEALGRLVSLEMGKIL-PEGLGEVQEMIDICDYAVGLSRMLYGLT 117
Query: 189 APADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P++ P H P+GV G I +NFP+ + W AL CGNT+V K +E TPL+A+
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177
Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
V+K+L E GLPPGV+N+V+G G G L V ++FTGST G+ V + A
Sbjct: 178 AVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ V LELGG + IV +DAD+D A +A GQ C R VHESVYD+F
Sbjct: 237 RRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GA 421
+E+ + +GDP G GP I+ EK L I G + TGG+R+ G
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGE 355
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
G Y++PT+ TGV DD I ++E F P+ ++K+ L+E I +N GL++ +FT +L
Sbjct: 356 PGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDL 415
Query: 482 DTANTLMRALRV--GSVWINCFDVFDAAI--PFGGYKQSGQGREKGSYSLSNYLQVKAV 536
A + G V +N A I FGG K++G GRE GS + Y++
Sbjct: 416 REAFRWLGPKGSDCGIVNVN-IPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 367 bits (945), Expect = e-122
Identities = 176/459 (38%), Positives = 244/459 (53%), Gaps = 12/459 (2%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+P TG+V+ V + +V AV+ AR A W + R++ +LR+ L H D
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRA--WAALGVEGRAQRLLRWKRALADHAD 58
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPADGPYHVQTL-H 201
E+A L + GKP A EV + + A A ++ + + P T+ +
Sbjct: 59 ELAELLHAETGKPRA-DAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEY 117
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
P GV G I PWN+PLL + PALA GN +VLK +E TPL +++ AG P G
Sbjct: 118 RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQG 177
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
VL +V+G G T GAAL VDK+AFTGS TG+ V+ AA+ L PV LELGGK P I
Sbjct: 178 VLQVVTGDGAT-GAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+++AA A + N GQ C + R +VHESVYD+FV + A A G
Sbjct: 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDI 294
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
G GP + Q + + +++ V GAK TGG R G + +PTV T V DM +
Sbjct: 295 GDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVM 354
Query: 442 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 501
++E FGPV ++ D DE I +N S+YGL+A VF+ +L A + R L G+V IN
Sbjct: 355 REETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDV 414
Query: 502 DVFDA--AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
+ A+PFGG K SG GR G+ L + + KA+
Sbjct: 415 LLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-119
Identities = 161/443 (36%), Positives = 222/443 (50%), Gaps = 23/443 (5%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
+ A+ A AF W + + ER+ ++ + ADLL DE+A L T + GKP + A+
Sbjct: 1 IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAE-AR 57
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
EV + RYYA + + A D +EP+GV I+PWNFP
Sbjct: 58 AEVEKCAWICRYYA---ENAEAFLADEPIETDAG-KAYVRYEPLGVVLGIMPWNFPF--- 110
Query: 221 AWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL-NIVSGYGPTAGA 275
W+V P L GNT++LK A P AL + +L EAG P GV N++
Sbjct: 111 -WQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE-- 167
Query: 276 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335
A+ + V + TGS G+ V A K NLK LELGG PFIV +DAD+DKA + A
Sbjct: 168 AIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTA 226
Query: 336 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395
N GQ C A R VHE VYD+F+EK VGDP GP +
Sbjct: 227 VKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLR 286
Query: 396 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
+++ + + V GA L GG+R G + PTV T V M +E+FGPV +++K
Sbjct: 287 DELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKV 346
Query: 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 515
KD +E I +N S +GL VFT +L+ A + R L G V+IN D +PFGG K+
Sbjct: 347 KDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKR 406
Query: 516 SGQGREKGSYSLSNYLQVKAVVT 538
SG GRE G + + ++ +K V
Sbjct: 407 SGYGRELGRFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-118
Identities = 183/470 (38%), Positives = 255/470 (54%), Gaps = 14/470 (2%)
Query: 72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSK 131
G++ D S +T L+P TG+ + + EDV+ A AA A E W ER++
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKE--WAATLPQERAE 58
Query: 132 IILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA 191
I+ + A +LE DEI ++G + A E + R A + +++G P+
Sbjct: 59 ILEKAAQILEERRDEIVEWLIRESGSTRIK-ANIEWGAAMAITREAATFPLRMEGRILPS 117
Query: 192 DGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-L 247
D P V EP+GV G I PWNFPL + V PALA GN +VLK A TP++ L
Sbjct: 118 DVPGKENRV--YREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGL 175
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++K+ EAGLP GVLN+V G G G A H ++FTGST G+ + +LA + +L
Sbjct: 176 LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HL 234
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K V LELGG +PF+V EDAD+D A A + F +QGQ C A +R VHE VYD+FVEK
Sbjct: 235 KKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKF 294
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 427
GDP GP I+ Q + +L I V+ GA L GGE A+G ++
Sbjct: 295 VERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE---AEGNVLE 351
Query: 428 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 487
PTV + V +DM IA++EIFGPV I+K D +E ++ +N ++YGL+ VFT +L+
Sbjct: 352 PTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQF 411
Query: 488 MRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
R + G IN V D +PFGG K SG GR G ++L + K +
Sbjct: 412 ARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 356 bits (916), Expect = e-118
Identities = 167/459 (36%), Positives = 252/459 (54%), Gaps = 11/459 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++DP TG+VI A+G + A++AAR+AFDE W R++++L AD E +
Sbjct: 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANA 59
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEP 203
+ +A L +NGK + A+ E+ RYYAG A G P G + + L EP
Sbjct: 60 ERLARLLALENGKILGE-ARFEISGAISELRYYAGLARTEAGRMIEPEPGSFSL-VLREP 117
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA-GLPPGV 262
+GVAG I+PWN P+++ + PALA G T+V+K A QT + ++L E LP GV
Sbjct: 118 MGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGV 177
Query: 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
+N+ + G A L + +VD ++FTGST TG+ + AA LK + LELGGK+P IV
Sbjct: 178 VNLFTESGSEGAAHLVASPDVDVISFTGSTATGR-AIMAAAAPTLKRLGLELGGKTPCIV 236
Query: 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK-ANALAMKRVVGDPFK 381
+DAD+D A AL GQ C AGSR V S+ D+ ++ A LA +V G
Sbjct: 237 FDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKV-GPGLD 295
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDM 438
GP ID +++ + + + GA++ G + AKG +++PT+ D
Sbjct: 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDA 355
Query: 439 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 498
I ++EIFGPV ++ + D E + +N + YGLAA V+T +L A + RA+R G+VWI
Sbjct: 356 DIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWI 415
Query: 499 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
N ++ A GGY+QSG GR G +L ++++ K +
Sbjct: 416 NDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 351 bits (904), Expect = e-115
Identities = 185/483 (38%), Positives = 254/483 (52%), Gaps = 37/483 (7%)
Query: 75 VDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
VD A+G T P TG+ + V A DV A + AR A + W ER+ ++L
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTE---VPMTTRLFRYYAGWADKIQGLTAPA 191
RF DL+ + +E+ L + GK + A E V +T R YYA A K L AP
Sbjct: 84 RFHDLVLENREELLDLVQLETGKA-RRHAFEEVLDVALTAR---YYARRAPK---LLAPR 136
Query: 192 D--GPYHVQT----LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G V T L +P GV G I PWN+PL + PAL GN +VLK QTPL+
Sbjct: 137 RRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT 196
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +LL+EAGLP + +V+G GP G AL + D L FTGST TG+++ + A
Sbjct: 197 ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-R 253
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
L +LELGGK+P IV +DAD+DKAA A A F N GQ C + R +VHES+YD+FV
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVR 313
Query: 366 K--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LG 420
A AM+ +G + G I Q E + ++ V GA + GG+ LG
Sbjct: 314 AFVAAVRAMR--LGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG 371
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
+ +PTV TGV DM +A++E FGPV S+ D+DE ++R+N + YGL A V+T +
Sbjct: 372 P--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGD 429
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAA-----IPFGGYKQSGQGREKGSYSLSNYLQVKA 535
+ +R G+V +N + + AA P GG K SG GR G+ L Y + +
Sbjct: 430 TARGRAIAARIRAGTVNVN--EGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQT 487
Query: 536 VVT 538
+ T
Sbjct: 488 IAT 490
|
Length = 524 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 347 bits (893), Expect = e-115
Identities = 165/439 (37%), Positives = 236/439 (53%), Gaps = 15/439 (3%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
D ++AV AA AF W + ER I+L+ ADLLE DE + G A
Sbjct: 1 DADQAVEAAAAAFPA--WSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWA 57
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAW 222
V + + R A +I G + P+D P + + EP+GV I PWN P+++
Sbjct: 58 GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALAS 279
+ LA GNT+VLK +E +P + + ++ HEAGLP GVLN+V+ P AL +
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177
Query: 280 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339
H V K+ FTGST G+I+ + AAK +LKPV LELGGK+P IV EDAD+D AA A +
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236
Query: 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399
F N GQ C + R VHES+ D+FVEK +K F G + G + + +++
Sbjct: 237 FLNSGQICMSTERIIVHESIADEFVEK-----LKAAAEKLFAGPVVLGSLVSAAAADRVK 291
Query: 400 KYIRSGVDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458
+ + + GAKL GG G + PT+ V DM I +E FGPV SI++ KD
Sbjct: 292 ELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDE 351
Query: 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSG 517
+E ++ +N S+YGL+A VFT +L A + + + G+V IN V D +P GG K SG
Sbjct: 352 EEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSG 411
Query: 518 QGREKGSYSLSNYLQVKAV 536
GR G + + + + K +
Sbjct: 412 YGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 345 bits (887), Expect = e-113
Identities = 177/481 (36%), Positives = 247/481 (51%), Gaps = 24/481 (4%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
LING++ +S SGKT P G+VI V A ++ A A A G WP M E
Sbjct: 5 LINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAG-RGWWPTMPLEE 62
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R + +FADLL+ + +E+A L W+ GK + A EV T R ++ G +
Sbjct: 63 RIDCLHKFADLLKENKEEVANLLMWEIGKTL-KDALKEVDRTIDYIRDTIEELKRLDGDS 121
Query: 189 APADGPYHVQTL-----HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
P D + EP+GV I P+N+PL + K+ PAL GNT+V K A Q
Sbjct: 122 LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGV 181
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
L + +++ H+AG P GV+N+V+G G G L +H +D ++FTGST G + +
Sbjct: 182 LLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP 241
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAA-ELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
K + LELGGK P IV DAD++ AA E+ AL ++ GQ C A R VHESV D+
Sbjct: 242 M---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESVADE 297
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
VE K VG P+ G+ P ID + + + I V GA + GG R G
Sbjct: 298 LVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREG-- 355
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482
G I PT+ V DM +A +E FGPV I++ D++E I+ +N S YGL A +FT +++
Sbjct: 356 GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDIN 415
Query: 483 TANTLMRALRVGSVWINCF-----DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
A L AL VG+V IN D F PF G K SG G + +L + + K +V
Sbjct: 416 KARKLADALEVGTVNINSKCQRGPDHF----PFLGRKDSGIGTQGIGDALRSMTRRKGIV 471
Query: 538 T 538
Sbjct: 472 I 472
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 343 bits (882), Expect = e-113
Identities = 177/469 (37%), Positives = 269/469 (57%), Gaps = 5/469 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +TA
Sbjct: 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 69
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ R+ +L+ H D++A L T + GKP + A+ E+ ++A +I G
Sbjct: 70 KERANILRRWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 128
Query: 187 LTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
T P + + +PIGV I PWNFP M K GPALA G T+VLK A QTP S
Sbjct: 129 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 188
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++ AK
Sbjct: 189 ALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 247
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F E
Sbjct: 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 307
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
K K +GD + G+ GP ID + K+ ++I ++ GA++ GG+ G +
Sbjct: 308 KLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNF 367
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485
+PT+ V + +AK+E FGP+ + ++KD +VI ++N +++GLAA + +L
Sbjct: 368 FQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVF 427
Query: 486 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534
+ AL G V IN + + PFGG K SG GRE Y + +YL++K
Sbjct: 428 RVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 344 bits (884), Expect = e-112
Identities = 167/483 (34%), Positives = 247/483 (51%), Gaps = 25/483 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ + + +++P +V+ V++ E +A+ AA +AF+ W + +
Sbjct: 39 LIIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFET--WKKWSP 94
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA----GWAD 182
+R++I+LR A ++ R E +A + GKP+ + A + YYA AD
Sbjct: 95 EDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAE-ADADTAEAIDFLEYYARQMLKLAD 153
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
+ P + H + + P+GV I PWNFP + A A+ GNT++LK A T
Sbjct: 154 GKPVESRPGE---HNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDT 210
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
P+ A ++L EAGLP GV+N V G G G L H + + FTGS G + + A
Sbjct: 211 PVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270
Query: 303 AKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
AK LK V E+GGK +V EDAD+D AAE + F GQ C A SR VHE
Sbjct: 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHE 330
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
VYD+ +EK L + VG+P GP I+ F+KI+ YI G + G +L GGE
Sbjct: 331 DVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEEG-RLVLGGE 388
Query: 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477
+KGY+I+PT+F V I ++EIFGPV + +K KD D ++ +N ++YGL V
Sbjct: 389 GDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVI 448
Query: 478 THNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS--YSLSNYLQV 533
++N + R VG+++ N C PFGG+ SG + G Y L +LQ
Sbjct: 449 SNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDY-LLLFLQA 507
Query: 534 KAV 536
K V
Sbjct: 508 KTV 510
|
Length = 514 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 341 bits (877), Expect = e-112
Identities = 183/476 (38%), Positives = 265/476 (55%), Gaps = 13/476 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+LLING+ V G+ P +P TG+VI +AE AE V+ AV AA AF E W + T
Sbjct: 3 KLLINGELVS-GEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R++ +L+ AD++E + A LE+ + GKP E+P +FR++AG A + G
Sbjct: 60 KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119
Query: 187 LTAPADGPY---HVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
L A G Y H + +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E T
Sbjct: 120 LAA---GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 176
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ +L
Sbjct: 177 PLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHT 235
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A S +K +ELGGK+P IV +DAD+D E F+N GQ C A R + +YD
Sbjct: 236 APS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDT 294
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGA 421
VEK A G P + GP E+++K + + G K+ TGGE+
Sbjct: 295 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKG 354
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
GYY PT+ G K D I + E+FGPV SI + D ++V+ +N SQYGLA+ V+T ++
Sbjct: 355 NGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDV 414
Query: 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
A+ L L+ G W+N + + +P GG K SG G++ Y L +Y V+ ++
Sbjct: 415 GRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = e-111
Identities = 176/457 (38%), Positives = 249/457 (54%), Gaps = 15/457 (3%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
+P G+VI V + D A++ AR + + +ER I+ R ADLL++ +E
Sbjct: 5 NPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKRAEE 62
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-----TLH 201
A + + GKP + A+ EV R A A++I+G P D T+
Sbjct: 63 FAKIIACEGGKPIKD-ARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIR 121
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
EP+GV I P+NFPL + A K+ PA+A G +VLK A +TPLSAL ++K+L EAG+P G
Sbjct: 122 EPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEG 181
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
VL +V+G G A A+ V L+FTGS G+ L A + K + LELGG +P I
Sbjct: 182 VLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGE---ALRANAGGKRIALELGGNAPVI 238
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+D A E F++ GQ C + R +VHE +YD+F+E A K VGDP
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
GP I E E++ +++ V+ GA+L GGER GA KPTV V D ++
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGA---LFKPTVLEDVPRDTKLS 355
Query: 442 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 501
+E FGPV I++Y D +E I+ +N++ YGL AG+FT +L+ A L VG V +N
Sbjct: 356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDS 415
Query: 502 DVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
F +PFGG K+SG GRE Y++ + K VV
Sbjct: 416 SAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-110
Identities = 167/431 (38%), Positives = 228/431 (52%), Gaps = 10/431 (2%)
Query: 91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL 150
G V+ V +A DV+RA + A A W ER+ ++ R ADLLE H DEIA
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAAQRA--WAATPPRERAAVLRRAADLLEEHADEIADW 58
Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQI 210
++G A EV AG + QG P+ P+GV G I
Sbjct: 59 IVRESGS-IRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVI 117
Query: 211 IPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV-SKLLHEAGLPPGVLNIVSGY 269
P+NFPL++ V PALA GN +VLK +TP+S V ++L EAGLP GVL+++ G
Sbjct: 118 SPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG- 176
Query: 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 329
G AG AL V ++FTGST G+ V + A + +LK V+LELGGK+ IV +DAD+D
Sbjct: 177 GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235
Query: 330 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389
AA + F +QGQ C A R VHESV D + K A A VGDP G + GP
Sbjct: 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPL 295
Query: 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPV 449
I++ Q +++ + V GA+LE GG G + +PTV +GVK M +EIFGPV
Sbjct: 296 INARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPV 352
Query: 450 QSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI- 508
+ + +E + +N ++YGL+AG+ + ++ A L LR G + IN V D
Sbjct: 353 APVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHN 412
Query: 509 PFGGYKQSGQG 519
PFGG SG G
Sbjct: 413 PFGGMGASGNG 423
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-110
Identities = 172/459 (37%), Positives = 243/459 (52%), Gaps = 19/459 (4%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+P TG+V+ V G E + A++ A +T Y+RS I+ + A LLE +
Sbjct: 4 RNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEARRE 58
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTL 200
E A L T ++G + + EV + R+ A A + G + D + TL
Sbjct: 59 EFARLITLESGLCL-KDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTL 117
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP+GV I P+N PL A K+ PA+A N IVLK +E+TPLSA+Y++ LL+EAGLPP
Sbjct: 118 REPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPP 177
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
+L++V+G G L +H +VD + FTG GK + AA + K LELGG P
Sbjct: 178 DMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGNDPL 234
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV +DAD+++AA LA + N GQ C A R VHESV D+FV+ + VVGDP
Sbjct: 235 IVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294
Query: 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 440
G ID E +I + + GA++ G +R GA PTV V D +
Sbjct: 295 DPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGA---LYAPTVLDHVPPDAEL 351
Query: 441 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 500
+E FGPV +++ KDLDE I SN++ YGL++GV T++LDT L+ L VG+V +N
Sbjct: 352 VTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNE 411
Query: 501 FDVFDAA-IPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 537
F + PFGG K SG G +E ++ VK
Sbjct: 412 VPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 333 bits (856), Expect = e-109
Identities = 172/468 (36%), Positives = 235/468 (50%), Gaps = 31/468 (6%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
P TG+ + + + DV A + AR A W ER+ + LRF DL+ DE
Sbjct: 2 APFTGEPLGELPQSTPADVEAAFARARAAQRA--WAARPFAERAAVFLRFHDLVLERRDE 59
Query: 147 IAALETWDNGK----PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT--- 199
+ L + GK FE+ V + R YYA A+++ G V T
Sbjct: 60 LLDLIQLETGKARRHAFEEVLD--VAIVAR---YYARRAERLLK-PRRRRGAIPVLTRTT 113
Query: 200 -LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
P GV G I PWN+PL + PAL GN +VLK QT L+AL+ +LL EAGL
Sbjct: 114 VNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGL 173
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P + +V+G G G A+ + D + FTGST TG++V + A L +LELGGK+
Sbjct: 174 PRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKN 230
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
P IV EDAD+DKAA A A F N GQ C + R +VHESVYD+FV + A +G
Sbjct: 231 PMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGA 290
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LGAKGYYIKPTVFTGVK 435
G G I Q +++ ++ V GA + GG LG Y+ +PTV TGV
Sbjct: 291 ALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGP--YFYEPTVLTGVT 348
Query: 436 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 495
+DM + +E FGPV SI + D DE I+ +N + YGL A V+T + + LR G+
Sbjct: 349 EDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGT 408
Query: 496 VWINCFDVFDAA-----IPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
V +N + + AA P GG K SG GR G+ L Y + + V
Sbjct: 409 VNVN--EGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 330 bits (848), Expect = e-108
Identities = 182/485 (37%), Positives = 267/485 (55%), Gaps = 15/485 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
++LLI+G+ V ++G TFPT++P T +V+ A+ A D++ A++AAR+AFDE W R T
Sbjct: 1 SRLLIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADK 183
A R + + + D L H +E+ L + G P AQ E P+ + A A+
Sbjct: 60 AL-RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDD--LGFAADLAES 116
Query: 184 IQ-----GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
G+ +P P E +GV G I PWNFP + K+GPALA GNT+VLK
Sbjct: 117 YAWTTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKP 176
Query: 239 AEQTPLSALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
A TP A + +L+ E PPGV+NIV+ GA LA VD ++FTGST TG+
Sbjct: 177 APDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRA 236
Query: 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
V+ AA + LK V LELGGKS FIV +DAD+ A +A + + + GQ C +R V
Sbjct: 237 VMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPR 295
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
+ YD+ V A A GDP G GP I + Q +++ Y+ V G + GG
Sbjct: 296 ARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGG 355
Query: 418 RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 475
R +G++++PTV G+ ++ +A++EIFGPV +++ + D+ ++ +N S YGL+
Sbjct: 356 RPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGT 415
Query: 476 VFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535
VF + + A + +R G+V +N + A PFGGYKQSG GRE G YL+ K
Sbjct: 416 VFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKL 475
Query: 536 VVTAL 540
+ TA
Sbjct: 476 IATAA 480
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 327 bits (842), Expect = e-107
Identities = 163/467 (34%), Positives = 235/467 (50%), Gaps = 25/467 (5%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L ING++V+S + + +P TG+VI V AE+V+ AV+AA+ AF W
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPA--WSATP 58
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R +++ +F LLE + DE+A L T ++GK A+ +V + + ++
Sbjct: 59 VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLAD-ARGDVLRGLEVVEFACSIPHLLK 117
Query: 186 GLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
G A G + +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P
Sbjct: 118 GEYLENVARG-IDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVP 176
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
+A+ +++LL EAGLP GVLN+V G G A AL H ++ ++F GST G+ + + AA
Sbjct: 177 GAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ K V G K+ +V DAD+++ A A F GQ C A S D++
Sbjct: 236 ANG-KRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEW 294
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---- 419
+ K A K VG G GP I E+I I SGV+ GAKL G +
Sbjct: 295 IPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPG 354
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
G ++ PT+ V DM I K+EIFGPV SI++ LDE I NA+ YG A +FT
Sbjct: 355 YENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTR 414
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAAIP-------FGGYKQSGQG 519
+ A R + G V IN IP FGG+K S G
Sbjct: 415 SGAAARKFQREVDAGMVGIN------VPIPVPLAFFSFGGWKGSFFG 455
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 323 bits (831), Expect = e-106
Identities = 149/396 (37%), Positives = 226/396 (57%), Gaps = 8/396 (2%)
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEP 203
EI+AL + GK +Q A+ EV T Y A WA + +G +D P ++
Sbjct: 13 SEISALIVEEGGKI-QQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRA 71
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV I+PWNFP + A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV
Sbjct: 72 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVF 131
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+V G G T G LA + +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV
Sbjct: 132 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVM 190
Query: 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKG 382
+DAD+D A + + N GQ C R +V + +YDQFV + AM+ V G+P +
Sbjct: 191 DDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQAVQFGNPAER 249
Query: 383 G-IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
I GP I++ E++ + + V+ GA++ GG+ + KGYY PT+ V+ +M I
Sbjct: 250 NDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIM 309
Query: 442 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 501
+E FGPV ++ + L+E I +N S YGL + ++T NL+ A ++ L+ G +IN
Sbjct: 310 HEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN-R 368
Query: 502 DVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAV 536
+ F+A F G+++SG G G + L YLQ + V
Sbjct: 369 ENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 325 bits (836), Expect = e-106
Identities = 158/453 (34%), Positives = 214/453 (47%), Gaps = 9/453 (1%)
Query: 88 PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
P G VI E V A+ AR A W + ER I+ R +LL + DEI
Sbjct: 3 PIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGV 206
A TW G+P Q+ E+ RY A++ + + P + EP+GV
Sbjct: 61 AEELTWQMGRPIAQAGG-EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGV 119
Query: 207 AGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266
I PWN+P L V PAL GN ++LK + QTPL + EAGLP GV ++
Sbjct: 120 VLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVL 179
Query: 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
T AAL + +D ++FTGS G+ + Q AA V LELGGK P V DA
Sbjct: 180 HLSHET-SAALIADPRIDHVSFTGSVAGGRAI-QRAAAGRFIKVGLELGGKDPAYVRPDA 237
Query: 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386
D+D AAE FFN GQ CC+ R +VHES+YD FVE A+ +GDP
Sbjct: 238 DLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTL 297
Query: 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKD 443
GP + + + + I + GA+ G A G Y+ PTV T V M + ++
Sbjct: 298 GPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMRE 357
Query: 444 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 503
E FGPV I+K K E I N S+YGL A V+T ++ A L L G+V++N D
Sbjct: 358 ETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDY 417
Query: 504 FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
D A+ + G K SG+G + K+
Sbjct: 418 LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 316 bits (813), Expect = e-103
Identities = 167/462 (36%), Positives = 232/462 (50%), Gaps = 18/462 (3%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+P TG+V+ VA +D+ A++AA KAF P + A+ R+ I+L LE
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-----YHV 197
+E+A + GKP + A+ EV FR A A +I G P D
Sbjct: 59 RFEELAETIVLEAGKPIKD-ARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117
Query: 198 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
PIG I P+NFPL + A KV PA+A G VLK A +TPLSAL + ++L E G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177
Query: 258 LPPGVLNIVSGYGPTAGAA-LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316
LP G +++ A L + + L+FTGS G + A K K V LELGG
Sbjct: 178 LPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232
Query: 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
+ IV DAD+D AA+ + F+ GQ C + R VH SVYD+F + A
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292
Query: 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 436
GDP GP I + E++ ++ VD GAKL TGG+R G ++PT+ V
Sbjct: 293 GDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPP 349
Query: 437 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 496
DM + +E+FGPV ++ Y D DE + N S++GL AGVFT +L+ A L VG V
Sbjct: 350 DMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGV 409
Query: 497 WINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
IN F +P+GG K SG GRE Y++ + + +V
Sbjct: 410 VINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLV 451
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 297 bits (763), Expect = 2e-95
Identities = 155/479 (32%), Positives = 232/479 (48%), Gaps = 44/479 (9%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
DP TG + V EDV+ A++AAR A E W + + ER K++ + + +E
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEE 59
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-------PADGPYHVQT 199
I + D GK ++ E+ + T +KI+ P P +
Sbjct: 60 ICRVACRDTGKTMVDASLGEI-LVT---------CEKIRWTLKHGEKALRPESRPGGLLM 109
Query: 200 LH-------EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY---- 248
+ EP+GV G I+ WN+P + AL GN IV+K +EQ S+ +
Sbjct: 110 FYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSI 169
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
+ + L G P ++ +V+ T AL SH +D + F GS GK V+ AA+S L
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LT 227
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
PV LELGGK P IV +DAD+D+ A + F + GQ C R VHE +YD+ +E
Sbjct: 228 PVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILT 287
Query: 369 ALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGY 424
G P G + G I +F+++ + + V+ GA+L GG+R +G+
Sbjct: 288 DRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGH 347
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484
Y PT+ V DM IA++E+FGPV ++K D +E ++ +N+++YGL A VF ++ A
Sbjct: 348 YFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRA 407
Query: 485 NTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR---EKGSYSLSNYLQVKAVVT 538
+ L G V IN F V +PFGG K SG GR E+G L N K+V
Sbjct: 408 RRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCN---PKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 296 bits (759), Expect = 3e-94
Identities = 166/480 (34%), Positives = 246/480 (51%), Gaps = 18/480 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+ING+ V++ + +++P +V+ V++ E A+ AA KAF+ W +
Sbjct: 35 LVINGERVETEN--KIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEA--WKKTDP 90
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-- 184
ER+ I+ + A ++ R E +AL + GKP+ + A EV YYA ++
Sbjct: 91 EERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNE-ADAEVAEAIDFMEYYARQMIELAK 149
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+G + Q ++ P GV I PWNFP + + GN +VLK AE P+
Sbjct: 150 GKPVNSREGETN-QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A ++L EAGLP GV+ V G G G L H + + FTGS G + + AAK
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268
Query: 305 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LK V E+GGK IV EDAD++ AA+ A + F GQ C AGSR VHE V
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+ VE+ + VG P + GP ID + F KI++YI G G +L +GG
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGD 387
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
+KGY+I PT+F V +A++EIFGPV + ++ D DE ++ +N ++YGL GV ++
Sbjct: 388 DSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISN 447
Query: 480 NLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAV 536
N D N VG+++ N PFGG+K SG + G L+ ++Q K V
Sbjct: 448 NRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 4e-86
Identities = 151/474 (31%), Positives = 226/474 (47%), Gaps = 40/474 (8%)
Query: 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
G ++ P G+ I V + ED + AA++AF E W + A +R +I+ +
Sbjct: 9 GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--WRDVPAPKRGEIVRQIG 66
Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHV 197
D L + + + L + + GK EV + + G + ++ GLT P++ P H
Sbjct: 67 DALRKKKEALGKLVSLEMGKIL-PEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHR 125
Query: 198 QTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL-- 252
+ E P+GV G I +NFP+ ++ W AL CGN +V K + TPL+A+ V+K+
Sbjct: 126 --MMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVA 183
Query: 253 --LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 310
L + GLP + ++V G G G AL V ++FTGST G+ V Q A
Sbjct: 184 RVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRS 241
Query: 311 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 370
LELGG + IV EDAD+D A +A GQ C R VHES+YD+ +E+
Sbjct: 242 LLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK- 300
Query: 371 AMKRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 429
A K+V +GDP G GP + L I G + GG+ + G Y++PT
Sbjct: 301 AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPT 360
Query: 430 VFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 489
+ G+ D I K+E F P+ +LK+ L+E I +N GL++ +FT +L A +
Sbjct: 361 IVEGLS-DAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLG 419
Query: 490 ALRVGS----VWINCFDVFDAAIP---------FGGYKQSGQGREKGSYSLSNY 530
GS V +N I FGG K++G GRE GS + Y
Sbjct: 420 PK--GSDCGIVNVN--------IGTSGAEIGGAFGGEKETGGGRESGSDAWKQY 463
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 268 bits (686), Expect = 5e-84
Identities = 160/462 (34%), Positives = 230/462 (49%), Gaps = 22/462 (4%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
T++P TG+ + ++V+ A++ A F + + T +R++ ADLLE
Sbjct: 5 TINPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEA 62
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PAD----GPYHVQ 198
D++AAL T + GK SA+ E + FRYYA + + L A PAD G
Sbjct: 63 DQVAALMTLEMGKTL-ASAKAEALKCAKGFRYYA---EHAEALLADEPADAAAVGASRAY 118
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLH 254
++P+GV ++PWNFPL W+V PAL GN +LK A P +ALY++ L
Sbjct: 119 VRYQPLGVVLAVMPWNFPL----WQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFR 174
Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 314
AG P G + G A A+ V TGS G+ V +A +K LEL
Sbjct: 175 RAGFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDE-IKKTVLEL 232
Query: 315 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
GG PFIV AD+D+AAE A A N GQ C A R VH VYD F EK A
Sbjct: 233 GGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAAL 292
Query: 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
VGDP GP + +++ K + V GA + GG+R G++ PTV T +
Sbjct: 293 RVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDI 352
Query: 435 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 494
DM + +E+FGPV S+ + D+DE I+ +NA+ +GL + +T + + L G
Sbjct: 353 TPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAG 412
Query: 495 SVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
V+IN V +PFGG K+SG GRE ++ + + +K V
Sbjct: 413 QVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 268 bits (686), Expect = 9e-84
Identities = 163/465 (35%), Positives = 237/465 (50%), Gaps = 25/465 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I G+ V + P G V+ V + +DV RA + A A+ P +T Y
Sbjct: 6 LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR----PTLTRY 58
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ERS I+ R A LL +EI+ L T ++G ++ + EV + + A A + G
Sbjct: 59 ERSAILDRAAALLAARKEEISDLITLESGLS-KKDSLYEVGRVADVLTFAAAEALRDDGQ 117
Query: 188 T-----APADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
P V T EP+ GV I P+N P+ A K+ PA+A N +V+K +E+
Sbjct: 118 IFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEK 177
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPLSALY++ +L+EAGLPP +L +V+G L ++ VD + FTG GK +
Sbjct: 178 TPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--- 234
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA++ + LELGG P IV EDAD+D+AA+LA + N GQ C A R V ESV D
Sbjct: 235 AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVAD 294
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+F E GDP + G ID + + GA+L G R GA
Sbjct: 295 RFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGA 354
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
PTV V M + ++E FGPV ++++ D+D+ I+ SN++ YGL++GV T+ L
Sbjct: 355 ---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRL 411
Query: 482 DTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKG 523
D + L+VG+V N ++V + PFGG K SG G ++G
Sbjct: 412 DYITRFIAELQVGTV--NVWEVPGYRLELTPFGGIKDSGLGYKEG 454
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 262 bits (672), Expect = 2e-81
Identities = 160/484 (33%), Positives = 252/484 (52%), Gaps = 23/484 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G++VD+ ++ P +V+ A+ + + A+ AA AF W
Sbjct: 21 LVIGGEWVDTKERMV--SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKT--WKDWPQ 76
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R++++L+ ADLL R E+ A T++ GK + + A +V RYYA A +++
Sbjct: 77 EDRARLLLKAADLLRRRRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRY 135
Query: 187 --LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ ++ + +G I PWNFP+ +F + +A GNT++ K AE +
Sbjct: 136 PAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVV 195
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
V ++ HEAG PPGV+ + G G GA L H + + FTGS TGK + + AA+
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255
Query: 305 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+ K + +E GGK+ IV E AD + E + F QGQ C A SR + +
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGA 315
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
Y+ +E+ A + VG P + G GP ID+EQ K+L YI G + G +L GG+RL
Sbjct: 316 YEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL 374
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD--EVIQRSNASQYGLAAGVF 477
+GY++ PTV V IA++EIFGPV S+++YKD D E ++ +N++ YGL GV+
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434
Query: 478 THNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQGREKGS-YSLSNYLQ 532
+ + R VG+++IN A+ PFGG+K SG + G + L +L+
Sbjct: 435 SRKREHLEEARREFHVGNLYIN--RKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLE 492
Query: 533 VKAV 536
+KAV
Sbjct: 493 MKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 252 bits (646), Expect = 3e-78
Identities = 146/433 (33%), Positives = 216/433 (49%), Gaps = 25/433 (5%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
V+ AV+AAR AF W ++ ER+ I+ RFA+LL+ + +E+A L + + GKP + A
Sbjct: 1 QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWE-A 57
Query: 164 QTEVP-------MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
QTEV ++ + + G + T A G ++ H P GV P+NFP
Sbjct: 58 QTEVAAMAGKIDISIKAYHERTG-----ERATPMAQGRAVLR--HRPHGVMAVFGPFNFP 110
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
+ + PAL GNT+V K +E TP A + +L EAGLPPGVLN+V G G G A
Sbjct: 111 GHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEA 169
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
LA+H +D L FTGS TG ++ + A K + LE+GG +P +V + AD+D AA L
Sbjct: 170 LAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIV 229
Query: 337 YALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395
+ F GQ C R V + V D F+E+ A + +G P GP I +
Sbjct: 230 QSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAA 289
Query: 396 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSIL 453
+ L + + G + ERL A ++ P + T D + +EIFGP+ +
Sbjct: 290 ARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVY 346
Query: 454 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGG 512
+Y D DE I +NA+++GL+AG+ + + + +R G V N + PFGG
Sbjct: 347 RYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGG 406
Query: 513 YKQSGQGREKGSY 525
SG R Y
Sbjct: 407 VGLSGNHRPSAYY 419
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 253 bits (648), Expect = 1e-77
Identities = 158/484 (32%), Positives = 234/484 (48%), Gaps = 43/484 (8%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ING+ ++ G P +DP I V+ +AEDV+ A++ A AF W
Sbjct: 36 IINGEETETGEGA--PVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG--WSATPVE 91
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER++I+ + ADLLE + E+ AL + GK A EV RYYA A ++
Sbjct: 92 ERAEILEKAADLLEANRGELIALAAAEAGKTLAD-ADAEVREAIDFCRYYAAQARELFSD 150
Query: 188 TAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ L GV I PWNFPL +F ++ ALA GNT++ K AEQTPL A
Sbjct: 151 PELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKS 305
+LLHEAG+P VL +V G G G AL +H +D + FTGST T K++ + LA +
Sbjct: 211 ARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERD 270
Query: 306 N-LKPVTLELGGKSPFIVCEDADVDKA-AELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ P+ E GGK+ IV A ++A ++ A F + GQ C A ++ E + ++F
Sbjct: 271 GPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEIAERF 329
Query: 364 VE--KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 419
+E K ++K VGDP+ GP ID + + + +L G L
Sbjct: 330 IEMLKGAMASLK--VGDPWDLSTDVGPLIDKPAGKLLRAHT--------ELMRGEAWLIA 379
Query: 420 -----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGL 472
GY++ P + V L E+FGP+ ++++K DLDE I+ NA+ YGL
Sbjct: 380 PAPLDDGNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGL 437
Query: 473 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQGREKGSYSLS 528
G+ + + + G+++IN AI PFGG+ SG G + G
Sbjct: 438 TLGIHSRDEREIEYWRERVEAGNLYINRNIT--GAIVGRQPFGGWGLSGTGPKAGGP--- 492
Query: 529 NYLQ 532
NYL
Sbjct: 493 NYLL 496
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 246 bits (630), Expect = 6e-76
Identities = 137/448 (30%), Positives = 209/448 (46%), Gaps = 41/448 (9%)
Query: 108 AVSAARKAFDEG-----PWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
V+ R+ F G W R + +L + +EI AAL D GKP +
Sbjct: 3 LVARLRETFLTGKTRSLEW-------RKAQLKALKRMLTENEEEIAAALYA-DLGKPPAE 54
Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217
+ TE+ + + W + P + EP+GV I PWN+PL
Sbjct: 55 AYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPL 114
Query: 218 -LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L A +G A+A GNT+VLK +E P ++ ++KL+ + P + +V G A A
Sbjct: 115 QLALAPLIG-AIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEGGVEVATAL 172
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
LA D + FTGS GKIV++ AAK +L PVTLELGGKSP IV +DA+++ AA
Sbjct: 173 LAEPF--DHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIA 229
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDS 392
+ F N GQ C A VHES+ D+ +E +K+ + + + ++ P I+
Sbjct: 230 WGKFLNAGQTCIAPDYVLVHESIKDELIE-----ELKKAIKEFYGEDPKESPDYGRIINE 284
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
F+++ + K+ GG+ + YI PT+ V D + ++EIFGP+ I
Sbjct: 285 RHFDRLASLL-----DDGKVVIGGQV-DKEERYIAPTILDDVSPDSPLMQEEIFGPILPI 338
Query: 453 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPF 510
L Y DLDE I+ N+ LA +F+ + ++ G V +N +PF
Sbjct: 339 LTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPF 398
Query: 511 GGYKQSGQGREKGSYSLSNYLQVKAVVT 538
GG SG G G + +K+V+
Sbjct: 399 GGVGNSGMGAYHGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 2e-72
Identities = 151/433 (34%), Positives = 211/433 (48%), Gaps = 34/433 (7%)
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
+A + A +A TA ER + R + +EI A D KP + TE
Sbjct: 8 QAHALALRAS--------TAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTE 59
Query: 167 V-PMTTRL---FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFA 221
+ P+ + + ++ W K + + P + +EP GV I PWN+P F
Sbjct: 60 ILPVLSEINHAIKHLKKWM-KPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYP---FN 115
Query: 222 WKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 278
GP A+A GNT +LK +E TP ++ ++K++ EA + + G A A L
Sbjct: 116 LAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLE 174
Query: 279 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 338
+ D + FTGS GKIV+ AAK +L VTLELGGKSP IV E AD+ KAA+ +
Sbjct: 175 --LPFDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWG 231
Query: 339 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQ 394
F N GQ C A FVHESV D FVE A +++ G + P ++
Sbjct: 232 KFLNAGQTCIAPDYVFVHESVKDAFVEHLKA-EIEKFYGK--DAARKASPDLARIVNDRH 288
Query: 395 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454
F+++ + V GAK+E GG+ A YI PTV T V DM I ++EIFGPV I+
Sbjct: 289 FDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIIT 347
Query: 455 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGG 512
Y+DLDEVI+ NA LA VF+ + N ++ G V +N + +PFGG
Sbjct: 348 YEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGG 407
Query: 513 YKQSGQGREKGSY 525
SG G G Y
Sbjct: 408 VNNSGIGSYHGVY 420
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 237 bits (605), Expect = 6e-72
Identities = 153/486 (31%), Positives = 230/486 (47%), Gaps = 26/486 (5%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
I G+F + ASG P +P T +V T VA ++V+ AV++AR+ F W + +
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R+ ++LR+ LL+ H DEIA L T ++GK A +V + + G ++G
Sbjct: 60 AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHS-DALGDVARGLEVVEHACGVNSLLKG 118
Query: 187 LTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
T+ V ++ +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P +
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A+ +++L EAG P GVLN+V G A L H +V ++F GST G+ + +
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
K V G K+ +V DAD D AA+ A + GQ C A S V D++V
Sbjct: 238 G-KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVP 295
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY- 424
+ A K +G G + GP I + +++ I G GA++ G GY
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYE 355
Query: 425 ---YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
++ PT+ V M ++EIFGPV +L+ L+E I NAS YG +FT +
Sbjct: 356 EGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDG 415
Query: 482 DTANTLMRALRVGSVWINCFDVFDAAIP-------FGGYKQS--GQGREKGSYSLSNYLQ 532
A + VG V +N IP F G+K S G G Y +
Sbjct: 416 AAARRFQHEIEVGQVGVN------VPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTR 469
Query: 533 VKAVVT 538
K V T
Sbjct: 470 GKTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 227 bits (579), Expect = 7e-68
Identities = 148/478 (30%), Positives = 221/478 (46%), Gaps = 31/478 (6%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+I + + P +P D++ V V A+ +A++AF W A
Sbjct: 41 IIGHSYKADGEAQ--PVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPT--WNATPAK 96
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + R ADLLE H E+ AL + GK +A EV RYYA + G
Sbjct: 97 ERAAKLDRLADLLELHMPELMALCVREAGKTI-HNAIAEVREAVDFCRYYAKQVRDVLG- 154
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
+ E GV I PWNFPL +F ++ ALA GNT++ K AEQT L A
Sbjct: 155 ----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAY 204
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+L+ EAG P G + ++ G G GAAL S + +AFTGST +++ Q A+
Sbjct: 205 RAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQRED 264
Query: 308 KPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
PV L E GG++ IV A ++ + F + GQ C A V E V D+ +
Sbjct: 265 APVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLT 324
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG---AKLETGGERLGAK 422
+ VG P GP ID+E + +L +I A+L R
Sbjct: 325 MIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQH 384
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHN 480
G ++ PT+F DD+ +E+FGPV +++YK +LD+++ + N + YGL GV +
Sbjct: 385 GTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRI 442
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQG-REKGSYSLSNYLQVK 534
T + + RVG+ ++N + A + PFGG SG G + G + L QV+
Sbjct: 443 ETTYRWIEKHARVGNCYVN-RNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 2e-67
Identities = 154/478 (32%), Positives = 214/478 (44%), Gaps = 53/478 (11%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHN 144
++P I V + +++A+ A F D W + A+ER I+ R ADL+E
Sbjct: 4 VNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEERA 61
Query: 145 DEIAALETWDNGKPF---------------------EQSAQTEVPMTTRLFRYYAGWADK 183
DE+A L + GKP Q E+PM
Sbjct: 62 DELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPM-------------- 107
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
GLT + G T EPIGV I +N PL + +V PA+A G +++K A TP
Sbjct: 108 --GLTPASAGRI-AFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATP 164
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
LS L LLHEAGLP G V A L + V +F GS G ++
Sbjct: 165 LSCLAFVDLLHEAGLPEGWCQAVPCENAVA-EKLVTDPRVAFFSFIGSARVGWML----- 218
Query: 304 KSNLKPVT---LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+S L P T LE GG +P IV AD+D F++ GQ C + R FV +
Sbjct: 219 RSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA 278
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D F ++ A A K VVGDP + GP I + +++ +++ V GA+L GG+RL
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLS 338
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
Y PTV D ++ EIFGPV + Y DLDE I ++N+ A VFT +
Sbjct: 339 DTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKD 396
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
LD A +R L +V +N F +PF G +QSG G Y++ + Q K V
Sbjct: 397 LDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 221 bits (567), Expect = 1e-66
Identities = 137/431 (31%), Positives = 201/431 (46%), Gaps = 39/431 (9%)
Query: 113 RKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA-ALETWDNGKPFEQSAQTEVPMTT 171
+ AF P P + ER + R LL + D +A A+ + ++ E+ +
Sbjct: 8 KAAFLANPPP--SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSI 65
Query: 172 RLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP- 226
++ W + P + ++P+GV G I+PWN+PL + +GP
Sbjct: 66 AGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYL---ALGPL 122
Query: 227 --ALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
ALA GN +++K +E TP SAL +++LL E + +V+G G AA S +
Sbjct: 123 IAALAAGNRVMIKPSEFTPRTSAL-LAELLAEY-FDEDEVAVVTG-GADVAAAF-SSLPF 178
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
D L FTGST G+ V++ AA+ NL PVTLELGGKSP I+ DAD+ KAAE + N
Sbjct: 179 DHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNA 237
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKIL 399
GQ C A V E ++FV A A A+ ++ + P I+ + ++
Sbjct: 238 GQTCVAPDYVLVPEDKLEEFVAAAKA-AVAKMYPT-----LADNPDYTSIINERHYARLQ 291
Query: 400 KYIRSGVDGGAKLET---GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ GA++ GE A + PT+ V DDM + ++EIFGP+ IL Y
Sbjct: 292 GLLEDARAKGARVIELNPAGEDFAATR-KLPPTLVLNVTDDMRVMQEEIFGPILPILTYD 350
Query: 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAA---IPFGG 512
LDE I NA LA F + + ++R G V IN D A +PFGG
Sbjct: 351 SLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN--DTLLHVAQDDLPFGG 408
Query: 513 YKQSGQGREKG 523
SG G G
Sbjct: 409 VGASGMGAYHG 419
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 4e-66
Identities = 158/474 (33%), Positives = 229/474 (48%), Gaps = 33/474 (6%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
++NG V A G+ P ++P D++ V E DV +A+ AA A W
Sbjct: 117 IVNGAPV--AGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPI--WSATPPA 172
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER+ I+ R ADL+E ++ L + GK +A EV RYYAG A D
Sbjct: 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTL-SNAIAEVREAVDFLRYYAGQARDTFGN 231
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
LT H P+G I PWNFPL +F ++ ALA GN+++ K AEQTPL A
Sbjct: 232 LT------------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIA 279
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+LLHEAG+PPGVL ++ G G T GAAL + V + FTGST +++ + AK
Sbjct: 280 AQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ 339
Query: 307 LKPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+P+ L E GG++ IV A ++ + F + GQ C A + E V D+ +
Sbjct: 340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRIL 399
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKG 423
+ VG+P + GP ID+E I K+I G + KG
Sbjct: 400 TMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKG 459
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNL 481
++ PT+ D L + E+FGPV +++YK +LDEVI + NA+ YGL GV T
Sbjct: 460 TFVAPTLIELENLDEL--QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRID 517
Query: 482 DTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGSYSLSNYLQ 532
+T + G++++N ++ A + PFGG SG G + G YL
Sbjct: 518 ETIAHVTERAHAGNLYVN-RNIVGAVVGVQPFGGEGLSGTGPKAGG---PLYLL 567
|
Length = 769 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 219 bits (560), Expect = 2e-65
Identities = 118/357 (33%), Positives = 175/357 (49%), Gaps = 36/357 (10%)
Query: 202 EPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP GV I PWN+P L A +G A+A GNT VLK +E TP ++ ++K++ E
Sbjct: 99 EPYGVVLIIAPWNYPFQLALAPLIG-AIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDE 156
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
+ +V G L D + FTGS GKIV++ AAK +L PVTLELGGKSP
Sbjct: 157 EYVAVVEGGVEENQELLDQKF--DYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPC 213
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV EDA++ AA+ + F N GQ C A VHESV ++F++ +K + +
Sbjct: 214 IVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK-----ELKEEIKKFY 268
Query: 381 KGGIQQGP---QIDSEQ-FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 436
+ P +I +E+ F+++ + +G K+ GG + YI+PT+ V
Sbjct: 269 GEDPLESPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-DRETLYIEPTILDNVTW 322
Query: 437 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 496
D + ++EIFGP+ +L Y LDE I+ + LA +F+ + ++ L G
Sbjct: 323 DDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGG 382
Query: 497 WINCFDVFDAAI-------PFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 546
IN D + PFGG SG G G YS + K+++ K W
Sbjct: 383 CIN-----DTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSIL---KKSTWF 431
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 219 bits (559), Expect = 5e-65
Identities = 154/479 (32%), Positives = 232/479 (48%), Gaps = 55/479 (11%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L ING ++ G+ F + +P +G+V+ + A V+ AV AAR AF W R++
Sbjct: 3 LWINGDWIA-GQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFE 59
Query: 128 ERSKIILRFADLLERHNDEIA---ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
ER I+ RFA LLE + +E+A A ET GKP ++A TEV +KI
Sbjct: 60 ERQAIVERFAALLEENKEELAEVIARET---GKPLWEAA-TEV----------TAMINKI 105
Query: 185 QGLTAPADGPYHVQT--------------LHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230
++ A YH +T H P GV P+NFP + + PAL
Sbjct: 106 -AISIQA---YHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 161
Query: 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
GNT+V K +E TP A KL +AGLP GVLN+V G G G ALA+H ++D L FTG
Sbjct: 162 GNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTG 220
Query: 291 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350
S TG ++ + A K + LE+GG +P ++ E AD+D A L + F + GQ C
Sbjct: 221 SANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCA 280
Query: 351 SRTFVHESVY-DQFVEKANALAMKRVVGDPFKGGIQQ-----GPQIDSEQFEKILKYIRS 404
R V + D F+ + A+A + VG + G I + + ++
Sbjct: 281 RRLLVPQGAQGDAFLARLVAVAKRLTVGRWD----AEPQPFMGAVISEQAAQGLVAAQAQ 336
Query: 405 GVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 462
+ G K +L A + P + TGV + + +E FGP+ +++Y D DE I
Sbjct: 337 LLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAI 393
Query: 463 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYKQSGQGR 520
+ +N +++GL+AG+ + + + + + +R G V W +A PFGG SG R
Sbjct: 394 RLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR 452
|
Length = 487 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 217 bits (554), Expect = 1e-64
Identities = 122/349 (34%), Positives = 178/349 (51%), Gaps = 29/349 (8%)
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
EP+GV I PWN+P+L+ + P A+A G T+VLK +E TP +A +++L+ +
Sbjct: 106 KEPLGVVLIIGPWNYPVLL---ALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY- 161
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
L P +V G P A L DK+ +TGS G+I+ + AAK +L PVTLELGGK
Sbjct: 162 LDPDAFQVVQGGVPETTALLEQKF--DKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGK 218
Query: 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
SP IV ++AD++ AA+ + F N GQ C A V SVYD+FVE +K+V+
Sbjct: 219 SPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVE-----ELKKVLD 273
Query: 378 DPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 433
+ + GG P ++ F ++ + + K+ GGE A +I PT+ +
Sbjct: 274 EFYPGGANASPDYTRIVNPRHFNRLKSLLDT---TKGKVVIGGEMDEAT-RFIPPTIVSD 329
Query: 434 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 493
V D + +E+FGPV I+K DLDE I+ N+ LA +FT + + ++ R
Sbjct: 330 VSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRS 389
Query: 494 GSVWINCFDVFDAA----IPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
G V IN D PFGG SG G G Y + + VV
Sbjct: 390 GGVVIN--DTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVVK 436
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 2e-64
Identities = 171/470 (36%), Positives = 241/470 (51%), Gaps = 45/470 (9%)
Query: 75 VDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
+ + G+ P + P V+ VA +AE V +A++AAR AF W R ER+ I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA--WSRTPVEERAAIL 613
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG----LTA 189
R ADLLE + E+ AL + GK Q A EV RYYA A ++ G L
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTL-QDAIAEVREAVDFCRYYAAQARRLFGAPEKLPG 672
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
P G + LH GV I PWNFPL +F +V ALA GNT++ K AEQTPL A
Sbjct: 673 P-TGESNELRLH-GRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEA 730
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKSNLK 308
KLLHEAG+P VL ++ G G T GAAL + + +AFTGST T +I+ + LAA+
Sbjct: 731 VKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG-P 789
Query: 309 PVTL--ELGGKSPFIVCEDA---------DVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
V L E GG++ IV D+ DV +A F + GQ C A FV E
Sbjct: 790 IVPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA-------FRSAGQRCSALRVLFVQE 840
Query: 358 SVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL--ET 414
+ D+ +E A+A + VGDP GP ID+E + +I + A+L +
Sbjct: 841 DIADRVIEMLKGAMA-ELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLLAQL 898
Query: 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGL 472
G+++ PT F D + + E+FGP+ +++YK DLD+VI NA+ YGL
Sbjct: 899 PLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGL 956
Query: 473 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQG 519
G+ + +TA+ + +RVG+V++N + A + PFGG SG G
Sbjct: 957 TLGIHSRIEETADRIADRVRVGNVYVN-RNQIGAVVGVQPFGGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 2e-62
Identities = 147/470 (31%), Positives = 228/470 (48%), Gaps = 25/470 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I+G++ G++F + +P T +V+ A A V AV+AAR AF W R++
Sbjct: 1 LFIDGKWRAGQ-GESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPA--WARLSLE 57
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV-PMTTRLFRYYAGWADKIQG 186
ER ++ RFA LLE + +A + + GKP ++ TEV M ++ + ++ G
Sbjct: 58 ERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKAYHER-TG 115
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ H P GV P+NFP + + PAL GNT+V K +E TP A
Sbjct: 116 ESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVA 175
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
KL +AGLP GVLN+V G G ALA+H ++D L FTGS+ TG ++ + A
Sbjct: 176 EETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRP 234
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVE 365
K + LE+GG +P IV E AD+D A L + F + GQ C R V + D F+
Sbjct: 235 EKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLA 294
Query: 366 KANALAMKRVVGD------PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
+ +A + VG PF G + I + +++L + G K +L
Sbjct: 295 RLVEVAERLTVGAWDAEPQPFMGAV-----ISLQAAQRLLAAQAKLLALGGKSLLAMRQL 349
Query: 420 GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477
+ P + TGV + + +E FGP+ +++Y D DE I +N +++GL+AG+
Sbjct: 350 DPGAALLTPGIIDVTGVAE---LPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLL 406
Query: 478 THNLDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYKQSGQGREKGSYS 526
+ + + + + +R G V W +A PFGG SG R Y+
Sbjct: 407 SDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYA 456
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (536), Expect = 5e-62
Identities = 137/461 (29%), Positives = 216/461 (46%), Gaps = 23/461 (4%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG+ ++ + A+D+ A+ A F + W R++ + L +
Sbjct: 11 SVNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARS 68
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT----- 199
+E+A + T + GKP Q A+ EV + L +YA G P V+
Sbjct: 69 EEMAQMITREMGKPINQ-ARAEVAKSANLCDWYAE-----HGPAMLKAEPTLVENQQAVI 122
Query: 200 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 259
+ P+G I+PWNFPL P L GN +LK A A ++++ +AG+P
Sbjct: 123 EYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIP 182
Query: 260 PGVLNIVSGYGPTAGAALASHMEVDK----LAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315
GV ++ A S M D + TGS G + A + LK LELG
Sbjct: 183 QGVYGWLN-----ADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELG 236
Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
G PFIV DAD++ A + A + N GQ C A R + E + F E+ A A
Sbjct: 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALK 296
Query: 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
+GDP GP + +++ + + + GA+L GGE++ G Y PTV V
Sbjct: 297 MGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVT 356
Query: 436 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 495
+M ++E+FGPV +I KD + ++ +N S++GL+A +FT + A + L G
Sbjct: 357 PEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGG 416
Query: 496 VWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
V+IN + DA + FGG K+SG GRE + L + ++ V
Sbjct: 417 VFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 219 bits (561), Expect = 9e-62
Identities = 158/475 (33%), Positives = 226/475 (47%), Gaps = 70/475 (14%)
Query: 76 DSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
G T P L+P DV+ V E AEDV RA++AA+ AF E W A ER+ I+
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILE 619
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
R ADL+E H E+ AL + GK +A EV RYYA Q
Sbjct: 620 RAADLMEAHMPELFALAVREAGKTL-ANAIAEVREAVDFLRYYAA-----QARRLLNGPG 673
Query: 195 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254
H+P+G I PWNFPL +F ++ AL GNT++ K AEQTPL A +LLH
Sbjct: 674 ------HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLH 727
Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-- 312
EAG+P L ++ G G T GAAL + + + FTGST +++ + AK + PV L
Sbjct: 728 EAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIA 787
Query: 313 ELGGKSPFIVCED---------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
E GG++ IV D ADV +A F + GQ C A + E V D+
Sbjct: 788 ETGGQNAMIV--DSSALPEQVVADVIASA-------FDSAGQRCSALRVLCLQEDVADRV 838
Query: 364 VEKANAL--AMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL- 419
+ L AM +GDP++ GP ID+E I +I + G +
Sbjct: 839 LT---MLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHI-------EAMRAAGRLVH 888
Query: 420 -------GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYK--DLDEVIQRSNAS 468
KG ++ PT+ + D+ + E+FGPV ++++K +LD VI NA+
Sbjct: 889 QLPLPAETEKGTFVAPTLIE-IDSISDL---EREVFGPVLHVVRFKADELDRVIDDINAT 944
Query: 469 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQG 519
YGL G+ + +T + +R G++++N + A+ PFGG SG G
Sbjct: 945 GYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNII--GAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (536), Expect = 1e-61
Identities = 157/517 (30%), Positives = 241/517 (46%), Gaps = 46/517 (8%)
Query: 51 AAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVS 110
A + D + +G++ S+SGK+ +P T V E+VN+A+
Sbjct: 1 MAGTGFFAEILDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAME 60
Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
+A+ A + W + ++R++++ + A +L+ H IA + KP + A TEV +
Sbjct: 61 SAKAA--QKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVVRS 117
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQ-------------TLHEPIGVAGQIIPWNFPL 217
L Y A +G+ +G + V T P+GV I P+N+P+
Sbjct: 118 GDLISYTAE-----EGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV 172
Query: 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 277
+ K+ PAL GN +VLK Q ++AL++ H AG P G+++ V+G G G L
Sbjct: 173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFL 232
Query: 278 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H V+ ++FTG T + ++ K+ + P+ +ELGGK IV EDAD+D AA
Sbjct: 233 TMHPGVNCISFTGGDTG----IAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIK 288
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397
F GQ C A V ESV D VEK NA K VG P + I E
Sbjct: 289 GGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP-----EDDCDITPVVSES 343
Query: 398 ILKYIRSGVDG----GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453
+I V GA +R +G I P + V+ DM IA +E FGPV ++
Sbjct: 344 SANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI 400
Query: 454 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-----DVFDAAI 508
+ ++E I NAS +GL VFT +++ A + A+ G+V IN D F
Sbjct: 401 RINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHF---- 456
Query: 509 PFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAW 545
PF G K SG G + + S++ +VK+ V L P++
Sbjct: 457 PFQGLKDSGIGSQGITNSINMMTKVKSTVINLPKPSY 493
|
Length = 496 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 200 bits (510), Expect = 9e-58
Identities = 140/475 (29%), Positives = 227/475 (47%), Gaps = 38/475 (8%)
Query: 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVN---RAVSAARKAFDEGPWPRMTAYERSKIIL 134
A+G +++P I V E ED RA A K W ++ A +R +I+
Sbjct: 31 ANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKI-----WMQVPAPKRGEIVR 85
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
+ D L D + L + + GK + EV + + G + ++ G P++ P
Sbjct: 86 QIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERP 144
Query: 195 YHVQT-LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL- 252
H+ + P+G+ G I +NFP + W AL CGN +V K A TPL + ++KL
Sbjct: 145 NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLV 204
Query: 253 ---LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
L + LP + G G G A+A + ++FTGS+ G +V Q +
Sbjct: 205 AEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV-QQTVNARFGK 262
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
LEL G + IV +DAD+ A +A GQ C R +HES+YD +E+
Sbjct: 263 CLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLT 322
Query: 370 LAMKRVVGDPFKGGIQQGP---QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI 426
+ + +GDP + G GP + FEK ++ I+S G K+ TGG + ++G ++
Sbjct: 323 VYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS---QGGKILTGGSAIESEGNFV 379
Query: 427 KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 486
+PT+ + D + K+E+FGPV ++K+K L+E I+ +N+ GL++ +FT N +T
Sbjct: 380 QPTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFK 438
Query: 487 LMRALRVGSVWINCFDVFDAAIP---------FGGYKQSGQGREKGSYSLSNYLQ 532
+G + +C + + IP FGG K +G GRE GS S Y++
Sbjct: 439 W-----IGPLGSDC-GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 1e-56
Identities = 127/416 (30%), Positives = 201/416 (48%), Gaps = 17/416 (4%)
Query: 129 RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQTEVPMTT----RLFRYYAGWADK 183
R + + +LE + E A+ D G+ ++ TEV +T L ++ +
Sbjct: 31 RKQQLRNLLRMLEENKQEFSEAVHK-DLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKP 89
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
+ T GP + EP+GV I WN+PL + + A+A GNT+VLK +E +P
Sbjct: 90 EKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSP 149
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
++ ++KLL + L P + ++ G L D + FTGS GK+V+Q AA
Sbjct: 150 HTSKLMAKLLTKY-LDPSYVRVIEGGVEVTTELLKEPF--DHIFFTGSPRVGKLVMQAAA 206
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ NL P TLELGGKSP IV + ++ AA + F N GQ C A VH S+ D+F
Sbjct: 207 E-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKF 265
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+E A A+K G+ K ++ +++ + I+ D G K+ GGE + +
Sbjct: 266 IE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGE-VDIEN 320
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
Y+ PT+ D + ++EIFGP+ IL Y+++DEV++ N+ LA F +
Sbjct: 321 KYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRH 380
Query: 484 ANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
++ G+V IN F + + +PFGG SG G G Y + K V+
Sbjct: 381 KELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 198 bits (504), Expect = 4e-56
Identities = 167/543 (30%), Positives = 256/543 (47%), Gaps = 25/543 (4%)
Query: 11 SRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLI 70
S S T+++ T+ R ++L R + S S++ + P PP + LI
Sbjct: 64 SSSTTTTTTTMLLRISGNNL-RPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPN----LI 118
Query: 71 NGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
G FV+S S ++P T +V++ V E+ AVSAA++AF W R
Sbjct: 119 GGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL--WRNTPITTRQ 176
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
+++L+F +L+ ++ D++A T + GK + S ++ + + G A G P
Sbjct: 177 RVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEYLP 235
Query: 191 -ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
++ EP+GV I P+NFP ++ W A+ CGNT +LK +E+ P +++ +
Sbjct: 236 NVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVIL 295
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
++L EAGLP GVLNIV G T A+ ++ ++F GS T G + AA K
Sbjct: 296 AELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KR 353
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHE--SVYDQFVEK 366
+ +G K+ +V DA++D A F GQ C A S FV + S D+ VE+
Sbjct: 354 IQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVER 413
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-- 424
A AL K G + GP I + E+I + I+SGVD GAKL G + GY
Sbjct: 414 AKAL--KVTCGSEPDADL--GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEK 469
Query: 425 --YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482
+I PT+ +GV DM K+EIFGPV ++ DE I N ++YG A +FT +
Sbjct: 470 GNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGA 529
Query: 483 TANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREK--GSYSLSNYLQVKAVVTA 539
A + G + IN V F G K S G G + + Q+K V
Sbjct: 530 AARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQK 589
Query: 540 LKN 542
K+
Sbjct: 590 QKD 592
|
Length = 604 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 2e-52
Identities = 147/438 (33%), Positives = 205/438 (46%), Gaps = 45/438 (10%)
Query: 108 AVSAARKAFDEGPWPRMTAYE-RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQT 165
AV AR+AF G + E R + + +LE + DEI AL D KP ++ +
Sbjct: 3 AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENEDEIVEALAK-DLRKPKFEAVLS 58
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-------HEPIGVAGQIIPWNFPL- 217
E+ + +Y + P ++ TL EP+GV I WN+PL
Sbjct: 59 EILLVKNEIKYAI---SNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQ 115
Query: 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN-----IVSGYGPT 272
L VG A+A GN +V+K +E +P +A KLL E L P L+ +V G G
Sbjct: 116 LTLVPLVG-AIAAGNCVVIKPSEVSPATA----KLLAE--LIPKYLDKECYPVVLG-GVE 167
Query: 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332
L D + +TGST+ GKIV+Q AAK +L PVTLELGGKSP V + D+D AA
Sbjct: 168 ETTELLKQ-RFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAA 225
Query: 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ F N GQ C A V ++FVE +K G+ K G I+
Sbjct: 226 RRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKK-TLKEFYGEDPKESPDYGRIIND 284
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
F+++ K + G K+ GG+ K YI PTV T VK + ++EIFGP+ I
Sbjct: 285 RHFQRLKKLLSGG-----KVAIGGQ-TDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPI 338
Query: 453 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---- 508
+ +LDE I+ N+ + LA VF++N N ++ G V +N D
Sbjct: 339 VTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN--DTIMHYTLDSL 396
Query: 509 PFGGYKQSGQGREKGSYS 526
PFGG SG G G YS
Sbjct: 397 PFGGVGNSGMGAYHGKYS 414
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 181 bits (462), Expect = 9e-51
Identities = 142/484 (29%), Positives = 209/484 (43%), Gaps = 78/484 (16%)
Query: 93 VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE-RHNDEIAALE 151
V+ +A V +A+ AA +A E W RM +R+ I L+ ADLL ++ E+ A
Sbjct: 59 VLATYHYADAALVEKAIEAALEARKE--WARMPFEDRAAIFLKAADLLSGKYRYELNAAT 116
Query: 152 TWDNGK-PFEQSAQTEVPMTTRL---FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA 207
GK + Q E+ L R+ +A+++ Y Q L P GV
Sbjct: 117 MLGQGKNVW----QAEIDAACELIDFLRFNVKYAEEL----------YAQQPLSSPAGVW 162
Query: 208 GQ------------IIPWNF----------PLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
+ + P+NF P LM GN ++ K ++ LS
Sbjct: 163 NRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALM-----------GNVVLWKPSDTAVLS 211
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKIVLQ 300
V K+L EAGLPPGV+N V G GP G + + + L FTGST T +I
Sbjct: 212 NYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGEN 271
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
L + E GGK+ +V ADVD F QGQ C A SR +V ES++
Sbjct: 272 LDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW 331
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERL 419
+ E+ + +GDP G ID + F++I YI + D A++ GG+
Sbjct: 332 PEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD 391
Query: 420 GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQR-SNASQYGLAA 474
+ GY+++PTV T K ++ +EIFGPV ++ Y D +E ++ S Y L
Sbjct: 392 DSVGYFVEPTVIETTDPKHKLM--TEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTG 449
Query: 475 GVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKGSYSLS 528
+F + ALR G+ +IN D A+ PFGG + SG + GS
Sbjct: 450 AIFAQDRKAIREATDALRNAAGNFYIN--DKPTGAVVGQQPFGGARASGTNDKAGS---P 504
Query: 529 NYLQ 532
L
Sbjct: 505 LNLL 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 6e-50
Identities = 145/476 (30%), Positives = 212/476 (44%), Gaps = 25/476 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ V + SG+ + P V+ E N+AV AA A E W +
Sbjct: 34 LVIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKE--WSLLPF 90
Query: 127 YERSKIILRFADLLE---RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
Y+R+ I L+ ADLL R EI A K Q+ V FR+ A +A +
Sbjct: 91 YDRAAIFLKAADLLSGPYRA--EILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARE 148
Query: 184 IQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
+ + +T + P+ G I P+NF + PAL GNT++ K ++
Sbjct: 149 LYEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTA 207
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKI 297
LS V ++L EAGLPPGV+N V G GP + + ++ + FTGST T ++
Sbjct: 208 MLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQV 267
Query: 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
L N + E GGK +V ADV+ F QGQ C A SR +V
Sbjct: 268 AQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPH 327
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET--G 415
S++ +F + A + VGDP G G ID + F KI+KYI + L G
Sbjct: 328 SLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAG 387
Query: 416 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQR-SNASQYGL 472
G+ + GY+++PTV + K+EIFGPV ++ Y D E++ + + YGL
Sbjct: 388 GKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGL 447
Query: 473 AAGVFTHNLDTANTLMRALR--VGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS 524
VF + D + LR G+ +IN PFGG + SG + G
Sbjct: 448 TGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGG 503
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 1e-46
Identities = 139/457 (30%), Positives = 202/457 (44%), Gaps = 48/457 (10%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILR-FADLLERHNDEI-AALETWDNGKPFEQS 162
R V R+ F G R + E K L+ L++ + D+I AAL D GKP +S
Sbjct: 1 APRLVRELRETFRSG---RTRSAEWRKSQLKGLLRLVDENEDDIFAALRQ-DLGKPSAES 56
Query: 163 AQTEVPMTTR--------LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWN 214
+ EV + L ++ A K T PA + + EP+GV I WN
Sbjct: 57 FRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKA----EIVSEPLGVVLVISAWN 112
Query: 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAG 274
FP L+ V A+A GN +VLK +E P ++ ++KL+ L + ++ G G
Sbjct: 113 FPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLI-PEYLDTKAIKVIEG-GVPET 170
Query: 275 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE- 333
AL + DK+ FTGS G+I++ AAK +L PVTLELGGK P IV D+ A
Sbjct: 171 TALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRR 228
Query: 334 --LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQG--P 388
+ N GQ C A V ES ++ A+K + F + +
Sbjct: 229 IAGGKWGC--NNGQACIAPDYVLVEESFAPTLID-----ALKNTLEKFFGENPKESKDLS 281
Query: 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGP 448
+I + + L + K+ GGER K YI+PT+ D I +EIFGP
Sbjct: 282 RIVNSHHFQRLSRLLDDPSVADKIVHGGER-DEKNLYIEPTILLDPPLDSSIMTEEIFGP 340
Query: 449 VQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI 508
+ I+ K ++E I+ N+ LAA VFT N + ++ G V N D +
Sbjct: 341 LLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFN-----DTVV 395
Query: 509 -------PFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
PFGG +SG G G +S + KAV+
Sbjct: 396 QYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 3e-46
Identities = 150/466 (32%), Positives = 217/466 (46%), Gaps = 64/466 (13%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145
DPR D++ +V E +V +A+ +A A P W ER+ I+ R ADL+E
Sbjct: 668 DPR--DIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILERAADLMEAQMQ 722
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQGLTAPADGPYHVQTLHEPI 204
+ L + GK F +A EV RYYAG D T H P+
Sbjct: 723 TLMGLLVREAGKTF-SNAIAEVREAVDFLRYYAGQVRDDFDNDT------------HRPL 769
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
G I PWNFPL +F +V ALA GN+++ K AEQTPL A ++L EAG+P GV+
Sbjct: 770 GPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQ 829
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ------LAAKSNLKPVTLELGGKS 318
++ G G T GAAL + V + FTGST ++ LQ L + P+ E GG++
Sbjct: 830 LLPGRGETVGAALVADARVRGVMFTGSTEVARL-LQRNLAGRLDPQGRPIPLIAETGGQN 888
Query: 319 PFIVCEDA-------DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
IV A DV +A F + GQ C A + + V D+ L
Sbjct: 889 AMIVDSSALTEQVVADVLASA-------FDSAGQRCSALRVLCLQDDVADR------TLK 935
Query: 372 MKR------VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK---LETGGERLGAK 422
M R +G+P + GP ID+E I ++I++ G
Sbjct: 936 MLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQS 995
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHN 480
G ++ PT+ D L K E+FGPV +++Y LDE+I++ NAS YGL GV T
Sbjct: 996 GTFVPPTLIELDSFDEL--KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRI 1053
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKG 523
+T + + VG++++N ++ A + PFGG SG G + G
Sbjct: 1054 DETIAQVTGSAHVGNLYVN-RNMVGAVVGVQPFGGEGLSGTGPKAG 1098
|
Length = 1318 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 140 bits (353), Expect = 4e-36
Identities = 128/444 (28%), Positives = 203/444 (45%), Gaps = 18/444 (4%)
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYE-RSKIILRFADLLERHNDEIAALETWDNGKPFE 160
A D + V+ R++FD+G YE R + + + + H EI A D GKP
Sbjct: 9 AADASILVTELRRSFDDGV---TRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL 65
Query: 161 QSAQTEVPM---TTRL-FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
+S+ EV + + +L + W + T+ P + + EP+GV I WN+P
Sbjct: 66 ESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYP 125
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L+ V A++ GN +VLK +E P S+ ++KLL E L + +V G A
Sbjct: 126 FLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL-EQYLDSSAVRVVEGAVTETTAL 184
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
L + DK+ +TGS+ G++++ AAK +L PV LELGGKSP +V D D+
Sbjct: 185 L--EQKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRII 241
Query: 337 YALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395
+ N GQ C + + + ++ A ++ G ++S F
Sbjct: 242 AGKWGCNNGQACISPDYILTTKEYAPKVID-AMKKELETFYGKNPMESKDMSRIVNSTHF 300
Query: 396 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
+++ K + + K+ GGE+ + I PT+ V D LI +EIFGP+ IL
Sbjct: 301 DRLSKLLDEK-EVSDKIVYGGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTL 358
Query: 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA--AIPFGGY 513
+L+E + LAA +FTHN + G + +N V A +PFGG
Sbjct: 359 NNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGV 418
Query: 514 KQSGQGREKGSYSLSNYLQVKAVV 537
+SG G G +S + KAV+
Sbjct: 419 GESGMGAYHGKFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 2e-32
Identities = 93/391 (23%), Positives = 157/391 (40%), Gaps = 31/391 (7%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
RA+ AA R+ +R+ + R L + +IAA GK + +
Sbjct: 1 PERALLAADI--STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAEN 58
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFA 221
R + ++ +I G Q H P G I +NFPL +
Sbjct: 59 ICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPL 118
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH 280
++ ALA GN +++K + + +LLH AG LPP + +++G G T AL H
Sbjct: 119 LQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLH 177
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYAL 339
+ FTGS+ + +LA + + LEL G + ++ DA VD A +
Sbjct: 178 PNPKMVLFTGSSRVAE---KLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDM 234
Query: 340 FFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398
GQ C A S FV E+ VEK AL +R + D G +Q + +
Sbjct: 235 TACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQ------TFTTLAM 288
Query: 399 LKYIRSGVDGGAKLETGGERLGAK------GYYIKPTVFTGVKDDMLIAK---DEIFGPV 449
+ ++ + G+ L G+ L G + +F + + + + +EIFGP
Sbjct: 289 IAHMEN--LLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPF 346
Query: 450 QSILKYKDLDE--VIQRSNASQYGLAAGVFT 478
+++YK V++ L A +++
Sbjct: 347 AIVVEYKKDQLALVLELLERMHGSLTAAIYS 377
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 1e-31
Identities = 123/469 (26%), Positives = 201/469 (42%), Gaps = 55/469 (11%)
Query: 98 AEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKI--ILRFADLLERHNDEIAALETWDN 155
E E + +V+ R+ ++ G R + +S++ +LR L + AL D
Sbjct: 1 EEAPGETLEGSVAELRETYESGR-TRSLEWRKSQLKGLLRL--LKDNEEAIFKALHQ-DL 56
Query: 156 GKPFEQSAQTEVPMTTRLFRY----YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQII 211
GK ++ + EV + T+ W + P + + EP+GV
Sbjct: 57 GKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFS 116
Query: 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP 271
WNFP+ + + A+A GN +VLK +E P ++ +++ + L + ++ G GP
Sbjct: 117 SWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANI-PKYLDSKAVKVIEG-GP 174
Query: 272 TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV-CEDADVDK 330
G L H + DK+ FTGS G+I++ AAK +L PV LELGGK P IV + D
Sbjct: 175 AVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDT 232
Query: 331 --------AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
+ A GQ C A V E +E + +K+ G+ +
Sbjct: 233 KVAVNRIVGGKWGSCA-----GQACIAIDYVLVEERFAPILIELLKST-IKKFFGENPRE 286
Query: 383 GIQQGPQIDSEQFEKILKYIR------SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 436
++ + F+++ ++ S V GG+ + K +I+PT+
Sbjct: 287 SKSMARILNKKHFQRLSNLLKDPRVAASIVHGGS--------IDEKKLFIEPTILLNPPL 338
Query: 437 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 496
D I +EIFGP+ I+ K +++ I N+ LA FT+N ++ GSV
Sbjct: 339 DSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSV 398
Query: 497 WINCFDVFDA-------AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
N DA ++PFGG +SG GR G YS + KAV+
Sbjct: 399 TFN-----DAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLR 442
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-25
Identities = 124/469 (26%), Positives = 183/469 (39%), Gaps = 76/469 (16%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-MTAYE 128
+ GQ+ +G D TG+V+ V+ E D AV+ AR+ GP R +T +E
Sbjct: 5 VAGQWHAG-TGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALTFHE 60
Query: 129 RSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
R+ ++ A L +++ AL D+ + T LF YA
Sbjct: 61 RAAMLKALAKYLMERKEDLYALSAATGATRRDSWIDIDGGIGT-------LF-AYASLGR 112
Query: 183 KIQGLTAPADGPYHVQTLHEPI----------------GVAGQIIPWNFPLLMFAWKVGP 226
+ + + V+ EP+ GVA I +NFP+ K P
Sbjct: 113 RE-----LPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAP 167
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDK 285
AL G +++K A T V K + E+G LP G L ++ G + G L E D
Sbjct: 168 ALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG---SVGDLLDHLGEQDV 224
Query: 286 LAFTGSTTTGKIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
+AFTGS T +L A N+ E + I+ DA + LF
Sbjct: 225 VAFTGSAATAA---KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPE----FDLFV 277
Query: 342 NQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ GQ C A R FV E+ D +E A K VVGDP G++ GP +
Sbjct: 278 KEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSR 337
Query: 393 EQFEKILKYI---RSG---VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD--- 443
EQ E + + + V GG KG + PT+ DD A
Sbjct: 338 EQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLC--DDPDAATAVHD 395
Query: 444 -EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 491
E FGPV +++ Y L E I+ + + L A V T++ A L+
Sbjct: 396 VEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-24
Identities = 109/446 (24%), Positives = 177/446 (39%), Gaps = 57/446 (12%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY-E 128
+ G++ SG P DP TG+ + V D+ A + AR+ G R Y +
Sbjct: 9 VAGRWQA-GSGAGTPLFDPVTGEELVRV-SATGLDLAAAFAFARE--QGGAALRALTYAQ 64
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R+ ++ +L+ + D + T N + ++ YYA +
Sbjct: 65 RAALLAAIVKVLQANRDAYYDIAT-ANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDAR 123
Query: 189 APADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
DG + Q + P GVA I +NFP K PAL G +++K
Sbjct: 124 LLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKP 183
Query: 239 AEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHM-EVDKLAFTGSTTTGK 296
A T + K + AG LP G L++V G + A L H+ D ++FTGS T
Sbjct: 184 ATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFTGSAETAA 239
Query: 297 I------VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ------- 343
+ V+Q + + N++ +L ++ DA A + LF +
Sbjct: 240 VLRSHPAVVQRSVRVNVEADSLNSA-----LLGPDAAPGSEA----FDLFVKEVVREMTV 290
Query: 344 --GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
GQ C A R FV E++YD E A K VG+P G++ GP + Q +
Sbjct: 291 KSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAG 350
Query: 402 IRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDM---LIAKDEIFGPVQSI 452
+ + + A++ G A + PT+ G D + E+FGPV ++
Sbjct: 351 L-AALRAQAEVLFDGGGFALVDADPAVAACVGPTLL-GASDPDAATAVHDVEVFGPVATL 408
Query: 453 LKYKDLDEVIQRSNASQYGLAAGVFT 478
L Y+D + + Q L A V++
Sbjct: 409 LPYRDAAHALALARRGQGSLVASVYS 434
|
Length = 521 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 94.5 bits (235), Expect = 3e-20
Identities = 132/505 (26%), Positives = 209/505 (41%), Gaps = 48/505 (9%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-MT 125
Q ++G++ + G+ P D TG+V+ V E DV AV+ AR+ GP R +T
Sbjct: 2 QSYLSGEWR-TGQGEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALT 57
Query: 126 AYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYAG 179
+ER++++ A L + + AL DN + T ++ R
Sbjct: 58 FHERARMLKALAQYLSERKEALYALAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPD 117
Query: 180 WADKIQGLTAP--ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
+ P DG + + + P GVA QI +NFP+ K PA G +
Sbjct: 118 ANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLA 177
Query: 237 KTAEQTPLSALYVSKLLHEAGL-PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295
K A T A + + + E+GL P G L ++ G +AG L D +AFTGS T
Sbjct: 178 KPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGDLLDHLDHRDVVAFTGSAATA 234
Query: 296 KIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYA------LFFNQGQ 345
+L A N+ E + I+ EDA D+ E +A L GQ
Sbjct: 235 D---RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEP-EFDLFAQEIVRELTIKAGQ 290
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C A R V +++ + ++ A K V+GDP + G+ GP + EQ + + +
Sbjct: 291 KCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAAL 350
Query: 406 VDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKD-EIFGPVQSILKYKDLDEVIQ 463
+ GA++ GG RL G + PT+ E FGPV + Y D E +
Sbjct: 351 LAAGAEVRLGGPGRL--DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAAR 408
Query: 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA--------IP---FGG 512
+ L A + T + + A + L ++ + DAA +P GG
Sbjct: 409 LAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGG 468
Query: 513 YKQSGQGREKGSY-SLSNYLQVKAV 536
++G G E G S+ +Y+Q A+
Sbjct: 469 PGRAGGGEELGGLRSVKHYMQRTAI 493
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 87.6 bits (218), Expect = 4e-18
Identities = 92/316 (29%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVL 263
GVA I +NFP+ K+ PA G ++K A T V +L+ E+G LP G L
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGAL 209
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
++ G +AG L D + FTGS T + +L A N+ + PF
Sbjct: 210 QLICG---SAGDLLDHLDGQDVVTFTGSAATAQ---KLRAHPNV------VANSVPFTA- 256
Query: 324 EDAD--------VDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEK 366
+AD D + LF + GQ C A R V ++ D +E
Sbjct: 257 -EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGA- 421
A K VVGDP G++ G EQ E + + + + + A++ GG E +GA
Sbjct: 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGAD 374
Query: 422 --KGYYIKPTVFTGVKDDMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 475
KG + PT+ DD L A E FGPV +++ Y DLDE I+ + + L A
Sbjct: 375 AEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVAS 432
Query: 476 VFTHNLDTANTLMRAL 491
+ T + + A L+
Sbjct: 433 LVTADPEVARELVLGA 448
|
Length = 675 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 8e-18
Identities = 117/437 (26%), Positives = 185/437 (42%), Gaps = 47/437 (10%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
L+ G++ +++ T LDP GD V + + +++N V + R+ G + E
Sbjct: 2 LVAGKWKGASNYTTL--LDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59
Query: 129 R----SKIILRFADLLERHNDE--IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
R + R A L + E A L K Q A EV +T + +AG D
Sbjct: 60 RYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQ-ALGEVVVTRKFLENFAG--D 116
Query: 183 KIQ----GLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235
+++ P D + Q P G I P+NFPL + A ++ AL GN +
Sbjct: 117 QVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPL 174
Query: 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295
LK + + +LLH G+P ++++ GPT L FTGS+
Sbjct: 175 LKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL-LEANPRMTLFTGSS--- 230
Query: 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCED-ADVDKAAELAHYALFFNQGQCCCAGSRTF 354
K+ +LA + + K V LE G I+ D +DVD A + GQ C A S F
Sbjct: 231 KVAERLALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILF 289
Query: 355 VHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKL 412
HE+ ++K ALA +R + D + GP + + E+IL ++ + GAK+
Sbjct: 290 AHENWVQAGILDKLKALAEQRKLED-----LTIGP-VLTWTTERILDHVDKLLAIPGAKV 343
Query: 413 ETGGERLGAK------GYYIKPTVFTGVKDDML-----IAKDEIFGPVQSILKYKD--LD 459
GG+ L G Y VF +++ + + E+FGP Q + +YKD L
Sbjct: 344 LFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLP 403
Query: 460 EVIQRSNASQYGLAAGV 476
V++ L A V
Sbjct: 404 LVLEALERMHAHLTAAV 420
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 84.1 bits (209), Expect = 3e-17
Identities = 106/432 (24%), Positives = 158/432 (36%), Gaps = 60/432 (13%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI---AALETWDNGKPFEQ 161
V+ A +AA AF+ + ++ R+ + AD +E DE+ A ET G P E
Sbjct: 1 VDAAAAAAAAAFES--YRALSPARRAAFLEAIADEIEALGDELVARAHAET---GLP-EA 54
Query: 162 SAQTEVPMTTRLFRYYA------GWADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIP 212
Q E+ TT R +A W D P P ++ + P+G
Sbjct: 55 RLQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGA 114
Query: 213 WNFPLLMFAWKVG-----PALACGNTIVLK-------TAEQTPLSALYVSKLLHEAGLPP 260
NFP A+ V ALA G +V+K T+E L A + L GLP
Sbjct: 115 SNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSE---LVARAIRAALRATGLPA 168
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLELGGKSP 319
GV +++ G G G AL H + + FTGS G+ + AA P ELG +P
Sbjct: 169 GVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228
Query: 320 FIVCEDADVDKAAELA---HYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRV 375
+ A ++ +A +L GQ C V D F+
Sbjct: 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAP 288
Query: 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
GI + + E + G L G G PT+F V
Sbjct: 289 AQTMLTPGIAEAYRQGVEA--------LAAAPGVRVLAGGAAAEGGNQA--APTLFK-VD 337
Query: 436 DDMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN--LDTANTLMR 489
+A E+FGP +++Y D E++ + A + L A + L A L+
Sbjct: 338 AAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLP 397
Query: 490 AL--RVGSVWIN 499
L + G + N
Sbjct: 398 VLERKAGRLLFN 409
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 3e-13
Identities = 61/257 (23%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL----------F 174
+R II A+ L +A+ + G + M
Sbjct: 14 HDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTE 73
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
R IQ + P +G +V+ PIGV I+P PL +A N
Sbjct: 74 RGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGIT-SALRGIATRNQC 130
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA----SHMEVDKLAFTG 290
+ + P + LL +A I+ Y P LA SH ++D + TG
Sbjct: 131 IFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATG 189
Query: 291 STTTGKIVLQLAAK-SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349
G+ + A K S PV G SP +V E AD ++A+ H + FF+Q C +
Sbjct: 190 ----GRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACAS 244
Query: 350 GSRTFVHESVYDQFVEK 366
+V + V D E+
Sbjct: 245 EQNLYVVDDVLDPLYEE 261
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 2e-06
Identities = 96/427 (22%), Positives = 161/427 (37%), Gaps = 89/427 (20%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
V+ AV+AA+ A + + + T +R KII + L + +E+A + E+
Sbjct: 4 ATVDDAVAAAKAAQKQ--YRKCTLADREKIIEAIREALLSNAEELAEMA-------VEE- 53
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQ----------TLHE--PIGVA 207
T + R DKI A+ G + TL E P GV
Sbjct: 54 --------TGMGRV----EDKIAKNHLAAEKTPGTEDLTTTAWSGDNGLTLVEYAPFGVI 101
Query: 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVL 263
G I P P LA GN +V + Y +L+++A G P ++
Sbjct: 102 GAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLV 161
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPF 320
V L +H +++ L TG G V++ A S K + G G P
Sbjct: 162 VTVEEPTIETTNELMAHPDINLLVVTG----GPAVVKAALSSGKKAI----GAGAGNPPV 213
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
+V E AD++KAA F+ C A +SV D + AM+R
Sbjct: 214 VVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIA-----AMQR------ 262
Query: 381 KGGIQQGPQIDSEQFEKIL--------------KYIRSGVDGGAKLETGGERLGAKGYYI 426
++ EQ E++L K++ G D L+ G + A I
Sbjct: 263 ----NGAYVLNDEQAEQLLEVVLLTNKGATPNKKWV--GKDASKILKAAGIEVPAD---I 313
Query: 427 KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTA 484
+ + KD + +E P+ +++ K+ DE I+ + ++G A + + N++
Sbjct: 314 RLIIVETDKDHPFVV-EEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENL 372
Query: 485 NTLMRAL 491
+ RA+
Sbjct: 373 TKMARAM 379
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 9/179 (5%)
Query: 192 DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSAL 247
D + EPIGV I P P +K +L N+I+ + + T +A
Sbjct: 84 DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+ + AG P ++ + L + L TG K AA S+
Sbjct: 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK-----AAYSSG 198
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
KP G +P ++ E AD+ +A + + F+ G C + V +SVYD+ +
Sbjct: 199 KPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 43.2 bits (103), Expect = 2e-04
Identities = 69/325 (21%), Positives = 126/325 (38%), Gaps = 56/325 (17%)
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSALYVSKLLHEAG 257
EP+GV +IP P +K AL N I+ + + + +A + + AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-- 315
P G++ + L H +VD + TG K AA S+ KP +G
Sbjct: 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK-----AAYSSGKPA---IGVG 205
Query: 316 -GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
G P + E AD+ +A + + F+ G C + V + +YD+ +KR
Sbjct: 206 PGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRA-----ELKR 260
Query: 375 VVGDPFKGGIQQGPQI-DSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI------- 426
+G + E+ EK+ K + D G L + +G I
Sbjct: 261 -----------RGAYFLNEEEKEKLEKAL---FDDGGTLN--PDIVGKSAQKIAELAGIE 304
Query: 427 --KPTVF-----TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLA---AG 475
+ T TGV + +++ E PV + + +D +E ++++ +YG A A
Sbjct: 305 VPEDTKVLVAEETGVGPEEPLSR-EKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAV 363
Query: 476 VFTHNLDTANTLMRALRVGSVWINC 500
+ +++ + + V + +N
Sbjct: 364 IHSNDEEVIEEFALRMPVSRILVNT 388
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 79/320 (24%), Positives = 118/320 (36%), Gaps = 67/320 (20%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
V+ AV+AA+ A + + + R +II + L H +E+A L E+
Sbjct: 36 ASVDDAVAAAKVAQQR--YQQKSLAMRQRIIDAIREALLPHAEELAELA-------VEE- 85
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQ----------TLHE--PIGVA 207
T + R DKI A A+ G + TL E P GV
Sbjct: 86 --------TGMGRV----EDKIAKNVAAAEKTPGVEDLTTEALTGDNGLTLIEYAPFGVI 133
Query: 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVL 263
G + P P LA GN++V +L +LL+EA G P ++
Sbjct: 134 GAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLV 193
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPF 320
V+ L H + L TG G V++ A KS K + G G P
Sbjct: 194 VTVAEPTIETAQRLMKHPGIALLVVTG----GPAVVKAAMKSGKKAI----GAGAGNPPV 245
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
+V E AD++KAA F+ C A V +SV D+ + M++
Sbjct: 246 VVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMR-----LMEK------ 294
Query: 381 KGGIQQGPQIDSEQFEKILK 400
+ +EQ EK+ K
Sbjct: 295 ----NGAVLLTAEQAEKLQK 310
|
Length = 465 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 213 WNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVS---KLLHEAGLPPGVLNIVSG 268
WN +FA +LA GN +++K L AL V ++L EAG P ++ + +
Sbjct: 208 WNTYPGLFA-----SLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAA- 261
Query: 269 YGPTAGAA--LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
+ P AA LA+ V + FTGS G+ + Q A ++ V E G + I+
Sbjct: 262 FDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQ---VYTEKAGVNTVIIESTD 318
Query: 327 DVDKAAELAHYALFFNQGQCCCA---------GSRTFVHESVYDQFVEKANALAMKRVVG 377
D ++L GQ C G RT YD+ V A A+ ++G
Sbjct: 319 DYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDE-VAADLATAIDGLLG 377
Query: 378 DPFK-----GGIQ 385
DP + G IQ
Sbjct: 378 DPARATAVLGAIQ 390
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 546 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.96 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.78 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.55 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.24 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.63 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.31 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.16 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.09 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.04 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.0 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.93 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.59 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.55 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 96.34 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.32 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 89.2 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 85.45 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-120 Score=931.18 Aligned_cols=484 Identities=61% Similarity=0.998 Sum_probs=472.4
Q ss_pred CCCcc-CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 009035 62 KVDYT-QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 62 ~~~~~-~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (546)
....+ ++||||+|+++.++++++++||+||+++++|+.++.+||+.||++|++||+.+.|++++..+|.++|+++++++
T Consensus 16 ~~~~~~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adli 95 (501)
T KOG2450|consen 16 EIQPTLGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLI 95 (501)
T ss_pred cccchhheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHH
Confidence 34444 89999999999999999999999999999999999999999999999999966799999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHH
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (546)
++++++|+.++++++|||+.+++..+++.+++.+|||+.|+++.++...+.......|+.++|+||++.|+|||||+.+.
T Consensus 96 e~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~ 175 (501)
T KOG2450|consen 96 EQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQ 175 (501)
T ss_pred HhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHH
Confidence 99999999999999999999999779999999999999999999888888888889999999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
.|+++|||++||+||+||++++|+|++.+++++.++|+|+||+|+|+|.|.+.|++|.+||+|++|+||||+.+|+.|++
T Consensus 176 awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~ 255 (501)
T KOG2450|consen 176 AWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIME 255 (501)
T ss_pred HHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh-cccCCC
Q 009035 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDP 379 (546)
Q Consensus 301 ~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~-~~vG~p 379 (546)
.++..++||+++|||||+|.||++|||+|.|++.++++.|+|+||+|++.+|+|||+++||+|++++++++++ +++|||
T Consensus 256 aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP 335 (501)
T KOG2450|consen 256 AAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDP 335 (501)
T ss_pred hhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCC
Confidence 9998889999999999999999999999999999999999999999999999999999999999999999966 999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
+++++++||+++..|++|+..||+.++++|+++++||.+.+++|+|+.|||+.++.++|+|++||+||||++|++|++.|
T Consensus 336 ~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~e 415 (501)
T KOG2450|consen 336 FDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEE 415 (501)
T ss_pred CCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHH
Confidence 99999999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|+|+++|++.|||+++|||+|.+++++++.++++|+||||++..+++.+||||+|+||+||+.|.+++.+||+.|+|+++
T Consensus 416 E~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~ 495 (501)
T KOG2450|consen 416 EVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVK 495 (501)
T ss_pred HHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 009035 540 LKNPAW 545 (546)
Q Consensus 540 ~~~~~~ 545 (546)
.+.++|
T Consensus 496 ~~~~~~ 501 (501)
T KOG2450|consen 496 LPQKNS 501 (501)
T ss_pred CCCCCC
Confidence 998876
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-116 Score=955.71 Aligned_cols=537 Identities=84% Similarity=1.332 Sum_probs=511.7
Q ss_pred CcccchhhhhcccccCCCc-cccccCCCchhhhHhHHhhhhcccccccccccccCCCCCCCCCCCccCceecCEeeeCCC
Q 009035 1 MAARRIPLLLSRSFTSSSP-TLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSAS 79 (546)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~ 79 (546)
||+||+|+|||||++++++ +++++|++++.+++.+ ||+| +.|++|+.+.+++.+.++++||||+|+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~ 71 (538)
T PLN02466 1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGRGIR------RFST---AAAAVEEPITPPVQVSYTQLLINGQFVDAAS 71 (538)
T ss_pred CCchHHHHHHHHHhhcccHHHhhhccccCCCCcccc------cccc---ccccccCcCCCccccccccceECCEEecCCC
Confidence 8999999999999977654 7888999999999999 9999 6466899999999999999999999998777
Q ss_pred CCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCCh
Q 009035 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF 159 (546)
Q Consensus 80 ~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 159 (546)
+++++++||.||+++++++.++.+|+++|+++|++||+.+.|+.++.++|.++|++++++|+++.++|++++++|+|||+
T Consensus 72 ~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 72 GKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 89999999999999999999999999999999999998556999999999999999999999999999999999999999
Q ss_pred hhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecC
Q 009035 160 EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239 (546)
Q Consensus 160 ~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 239 (546)
.+++..|+..+++.++||+.++++..+...+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 152 ~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs 231 (538)
T PLN02466 152 EQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECC
Confidence 99876699999999999999998887765554334456899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCc
Q 009035 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319 (546)
Q Consensus 240 ~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p 319 (546)
+.+|++++.+++++.++|+|+|++|+|+|.+.++++.|..||+||+|+||||+++|+.|++.+++.++||+++|+|||||
T Consensus 232 ~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp 311 (538)
T PLN02466 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSP 311 (538)
T ss_pred CCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCe
Confidence 99999999999999999999999999999888889999999999999999999999999999885478999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHH
Q 009035 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (546)
Q Consensus 320 ~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~ 399 (546)
+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|++++.++++|+|+++++++||+++.++++++.
T Consensus 312 ~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~ 391 (538)
T PLN02466 312 FIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKIL 391 (538)
T ss_pred EEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC
Q 009035 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479 (546)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~ 479 (546)
++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 392 ~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~ 471 (538)
T PLN02466 392 RYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQ 471 (538)
T ss_pred HHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 99999999999999999875557899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCCCCCCC
Q 009035 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 546 (546)
Q Consensus 480 d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~ 546 (546)
|.+++.++++++++|+||||+++..++.+||||+|.||+|+++|++|+++|++.|+|+++++||+|+
T Consensus 472 d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~~~~~ 538 (538)
T PLN02466 472 NLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL 538 (538)
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCCCCCC
Confidence 9999999999999999999998888888999999999999999999999999999999999999996
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-109 Score=811.31 Aligned_cols=471 Identities=39% Similarity=0.661 Sum_probs=453.8
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..+.||+|+|+++.++++|++.||++||+|+.++.++.+|.+.|+.+|.+||. .|+.++..+|.++|+++.++|.+|.
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~ 100 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK 100 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence 56889999999998899999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
|+|++++++|+|||+.|++. ||..+..+++||+.+++++.|...+.. ...+..+.++|+||+++|+|||||..+...+
T Consensus 101 ddLa~iiTlE~GKpL~eA~g-Ev~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK 179 (503)
T KOG2451|consen 101 DDLATIITLENGKPLGEAKG-EVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK 179 (503)
T ss_pred HHHHHHHhhhcCCchhhccc-eeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence 99999999999999999986 999999999999999999999987643 4566788999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC---CchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG---YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g---~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
..+||++||+||+||+++||++++.++++..+||+|+|++|+|++ ...+.|..|..+|+|++|+||||+.+||.+++
T Consensus 180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~ 259 (503)
T KOG2451|consen 180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA 259 (503)
T ss_pred HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence 999999999999999999999999999999999999999999996 35589999999999999999999999999999
Q ss_pred HHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 301 ~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
+++. .+|++.+||||+.|+||++|||+|.|++.....+|.++||.|.+++|+|||+++||+|+.+|.++++++++||.+
T Consensus 260 qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 260 QSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred hhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC-CCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
|+++++||||+..+++++..++++|+++|+++++||+...+ .++|++|||+.+|+++|.+..||+|||+.+|++|+|.|
T Consensus 339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdtee 418 (503)
T KOG2451|consen 339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEE 418 (503)
T ss_pred CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHH
Confidence 99999999999999999999999999999999999995444 45999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|+|+.+|+++.||++|+||+|..+..|++++|++|+|-+|.--..++..||||.|+||+||+++.||+++|+..|.+++.
T Consensus 419 Evi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig 498 (503)
T KOG2451|consen 419 EVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIG 498 (503)
T ss_pred HHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeec
Confidence 99999999999999999999999999999999999999999877888999999999999999999999999999998764
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-106 Score=870.74 Aligned_cols=486 Identities=57% Similarity=0.976 Sum_probs=460.0
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (546)
+.++..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.+.|+.++.++|.++|++++++|
T Consensus 16 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 95 (501)
T PLN02766 16 PEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLI 95 (501)
T ss_pred CCcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHH
Confidence 34445578999999987777899999999999999999999999999999999999854699999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHH
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (546)
++++++|++++++|+|||+.+++..|+..+++.++|++..+++..+...+.......++.++|+|||++|+|||||+...
T Consensus 96 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 175 (501)
T PLN02766 96 EEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMF 175 (501)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHH
Confidence 99999999999999999999887569999999999999988877665443333445678999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++..|+.||++|.|.||||+.+|+.|++
T Consensus 176 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 176 FMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 301 ~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
.++..+++|+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~ 335 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPF 335 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 98844799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
++++++||+++.++++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 336 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~de 415 (501)
T PLN02766 336 DPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEE 415 (501)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976545789999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
||+++|+++|||+++|||+|.+++.++++++++|+||||++...++.+||||+|.||+|+++|++++++||+.|+|+..+
T Consensus 416 ai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (501)
T PLN02766 416 AIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL 495 (501)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999999999998777788999999999999999999999999999999999
Q ss_pred CCCCCC
Q 009035 541 KNPAWL 546 (546)
Q Consensus 541 ~~~~~~ 546 (546)
-|++|+
T Consensus 496 ~~~~~~ 501 (501)
T PLN02766 496 YNSPWL 501 (501)
T ss_pred cccccC
Confidence 999996
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-106 Score=864.89 Aligned_cols=470 Identities=37% Similarity=0.658 Sum_probs=447.0
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|+++++
T Consensus 11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 88 (482)
T PRK11241 11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQD 88 (482)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3589999999876778999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
+|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.. .+...+++++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (482)
T PRK11241 89 DLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167 (482)
T ss_pred HHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence 9999999999999999875 999999999999999887766544332 23446789999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+||.|+||||+++|+.|++.++.
T Consensus 168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~ 247 (482)
T PRK11241 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK 247 (482)
T ss_pred HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999887
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus 248 -~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 326 (482)
T PRK11241 248 -DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV 326 (482)
T ss_pred -cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
++||++++++++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 406 (482)
T PRK11241 327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQ 406 (482)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999754346999999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+|+++|||++||||+|.++++++++++++|+||||++...++.+||||+|.||+|+++|.+|+++||+.|++++.
T Consensus 407 aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 407 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred hhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 999999999999999999999999999999999999876667789999999999999999999999999998764
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-105 Score=856.83 Aligned_cols=466 Identities=50% Similarity=0.818 Sum_probs=445.1
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|++..+ +++++||.||+++++++.++.+|+++|+++|+.||+ .|++++..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e 77 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE 77 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 5799999998755 899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|+.++++|+|||+.+++. |+..+++.++|++.+++++.+...+...+...++.++|+|||++|+|||||+++.+|+++|
T Consensus 78 la~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap 156 (472)
T COG1012 78 LAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP 156 (472)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence 999999999999999987 6999999999999999988877644444677899999999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|+.||+|++|+||||+.+|+.|++.+++ +
T Consensus 157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~ 235 (472)
T COG1012 157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-N 235 (472)
T ss_pred HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-c
Confidence 999999999999999999999999999999999999999999887799999999999999999999999999999997 8
Q ss_pred CcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh-cccCCCCCCCCc
Q 009035 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQ 385 (546)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~-~~vG~p~~~~~~ 385 (546)
+||+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++|||.|+.++
T Consensus 236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~ 314 (472)
T COG1012 236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD 314 (472)
T ss_pred CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 65 899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 465 (546)
+||+++.++++++.++|++++++|+.+++||+.. . |+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~-~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lA 392 (472)
T COG1012 315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP-G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELA 392 (472)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC-C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999833 3 9999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 466 N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~--~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
|+++|||+++|||+|..++.++++++++|+||||++. ...+.+||||+|.||+|+++|.+++++|++.|++.....
T Consensus 393 N~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 393 NDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 9999999999999999999999999999999999985 345679999999999999999999999999999987653
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-104 Score=862.06 Aligned_cols=478 Identities=31% Similarity=0.445 Sum_probs=448.2
Q ss_pred CCCCCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 009035 58 TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137 (546)
Q Consensus 58 ~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a 137 (546)
.-+......++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++
T Consensus 106 ~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~k~a 183 (604)
T PLN02419 106 TQPQMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQ 183 (604)
T ss_pred cCcccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHH
Confidence 333444566789999999876678899999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccch
Q 009035 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFP 216 (546)
Q Consensus 138 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P 216 (546)
++|++++++|+.++++|+|||+.+++. |+..+++.++||+.+++...+...+. ..+...++.++|+|||++|+|||||
T Consensus 184 ~~L~~~~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfP 262 (604)
T PLN02419 184 ELIRKNMDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFP 262 (604)
T ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccH
Confidence 999999999999999999999999885 99999999999999988777654432 2344568899999999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHH
Q 009035 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (546)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 296 (546)
+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+ +.++.|+.|++|++|+||||+.+|+
T Consensus 263 l~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~ 341 (604)
T PLN02419 263 AMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGM 341 (604)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHH
Confidence 999999999999999999999999999999999999999999999999999964 6788899999999999999999999
Q ss_pred HHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc
Q 009035 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (546)
Q Consensus 297 ~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v 376 (546)
.|++.++. +++|+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|||||++ +|+|+++|+++++++++
T Consensus 342 ~I~~~Aa~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~v 419 (604)
T PLN02419 342 HIYARAAA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKV 419 (604)
T ss_pred HHHHHHhc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhcc
Confidence 99999887 79999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc----CCCCceecceeeccCCCCCcccccccccceEEE
Q 009035 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452 (546)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v 452 (546)
|+|.|+++++||+++.++++++.++|++++++|+++++||... ..+|+|++|||+.+++++|.+++||+||||++|
T Consensus 420 G~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V 499 (604)
T PLN02419 420 TCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVC 499 (604)
T ss_pred CCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEE
Confidence 9999999999999999999999999999999999999999742 146999999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCC-CCCCCCCccCCCCCCCC--CcchHHHHHh
Q 009035 453 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD-VFDAAIPFGGYKQSGQG--REKGSYSLSN 529 (546)
Q Consensus 453 ~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~-~~~~~~pfgG~k~SG~g--~~~g~~~l~~ 529 (546)
++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.. ...+.+||||+|.||+| +++|.+++++
T Consensus 500 ~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ 579 (604)
T PLN02419 500 MQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDF 579 (604)
T ss_pred EecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999864 33467999999999999 7999999999
Q ss_pred hheeeEEEEeCC
Q 009035 530 YLQVKAVVTALK 541 (546)
Q Consensus 530 ~~~~k~v~~~~~ 541 (546)
|++.|+|+.+.+
T Consensus 580 ft~~K~v~~~~~ 591 (604)
T PLN02419 580 FTQIKLVTQKQK 591 (604)
T ss_pred hhCeEEEEEccC
Confidence 999999988764
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-103 Score=849.03 Aligned_cols=474 Identities=46% Similarity=0.829 Sum_probs=449.2
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.+.|+.+|..+|.++|++++++|+++.+
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 36899999998777789999999999999999999999999999999999984469999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC----CCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
+|++++++|+|||+.++...|+..+++.++||+.++++..+...+.. .....++.++|+|||++|+|||||+...+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 99999999999999998756999999999999999888776544321 22246789999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|++
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 88547899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC--CHH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLD 459 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~--~~~ 459 (546)
+++++||+++.++++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+ |++
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~ 405 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVD 405 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHH
Confidence 999999999999999999999999999999999997655578999999999999999999999999999999998 699
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||++||||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.++|++||+.|+|+++
T Consensus 406 eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 406 GVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-103 Score=845.24 Aligned_cols=474 Identities=79% Similarity=1.309 Sum_probs=450.8
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
++.++||||+|+.+.++++++++||+||++|++++.++.+|+++++++|++||+.+.|++++.++|.++|++++++|+++
T Consensus 2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 81 (476)
T cd07142 2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKH 81 (476)
T ss_pred CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHh
Confidence 56678999999987677899999999999999999999999999999999999844599999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++..|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 82 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 161 (476)
T cd07142 82 ADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK 161 (476)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence 99999999999999999887669999999999999998887766554333345678999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|..||++|.|+||||+.+|+.|++.++
T Consensus 162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa 241 (476)
T cd07142 162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA 241 (476)
T ss_pred HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|++++
T Consensus 242 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 321 (476)
T cd07142 242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKG 321 (476)
T ss_pred HcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 54789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|++|||+
T Consensus 322 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~ 401 (476)
T cd07142 322 VEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIK 401 (476)
T ss_pred CcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999987556799999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
++|+++|||+++|||+|.+++.++++++++|+||||+++..++.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 402 ~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 402 RANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 99999999999999999999999999999999999998888888999999999999999999999999999985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-102 Score=837.57 Aligned_cols=469 Identities=38% Similarity=0.668 Sum_probs=443.5
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
.++||||+|+.+ ++.+++++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++++
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ 78 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 367999999975 467899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
+|++++++|+|||+.++...|+..+++.++|++..++.+.+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 158 (472)
T TIGR03374 79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 158 (472)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence 9999999999999998865699999999999999887766543221 123456889999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||++|+|.||||+++|+.|++.++.
T Consensus 159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 237 (472)
T TIGR03374 159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP 237 (472)
T ss_pred HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999985 99999999999888899999999999999999999999999999887
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|++++.++++|+|.++++
T Consensus 238 -~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 238 -SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred -cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCC-CeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
++||+++..+++++.++|++++++| +++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 396 (472)
T TIGR03374 317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVN 396 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHH
Confidence 9999999999999999999999999 799999976545689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+++.+
T Consensus 397 ~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~~ 472 (472)
T TIGR03374 397 WANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK 472 (472)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEEC
Confidence 9999999999999999999999999999999999999877778899999999999999999999999999998753
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-102 Score=836.85 Aligned_cols=469 Identities=41% Similarity=0.696 Sum_probs=444.2
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (546)
+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+. .|++++.++|.++|+++++.|++++++|
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVS-AWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHh-hhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 689999998767788999999999999999999999999999999999982 3999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC------CCCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA------DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~------~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
++++++|+|||+.+++..|+..+++.++|++.++++..+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 99999999999999875699999999999999988766654321 112356789999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++. .+..|+.||+||+|+||||+++|+.|.+.
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 239 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQ 239 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999776 89999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ +++|+++|+||+||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.|
T Consensus 240 aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 318 (477)
T cd07113 240 AAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMD 318 (477)
T ss_pred HHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 887 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+++++||+++.++++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 319 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~dea 398 (477)
T cd07113 319 ESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEEL 398 (477)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999765446999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++..++.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 399 i~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 399 IQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999877778899999999999999999999999999999764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-102 Score=837.51 Aligned_cols=470 Identities=42% Similarity=0.691 Sum_probs=446.6
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.+
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIANKE 102 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999876678999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
+|++++++|+|||..+++. |+..+++.++|++..+++..+...+.. .+...+++++|+|||++|+|||||+.+.++++
T Consensus 103 ~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i 181 (498)
T PLN02278 103 DLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181 (498)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence 9999999999999999875 999999999999999888766544432 23456788999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+++|++.+.++.|+.||+||+|+||||+++|+.|++.+++
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 261 (498)
T PLN02278 182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261 (498)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999887889999999999999999999999999999887
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
++||+++|+|||||+||++|||+|.|++.|++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus 262 -~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~ 340 (498)
T PLN02278 262 -TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGV 340 (498)
T ss_pred -cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
++||+++..+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~ 420 (498)
T PLN02278 341 TQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAI 420 (498)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999764446899999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+|+++|||+++|||+|.+++++++++|++|+||||+.....+.+||||+|.||+|+++|++|+++||+.|+|+..
T Consensus 421 ~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 421 ANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 999999999999999999999999999999999999766667799999999999999999999999999998764
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-101 Score=835.22 Aligned_cols=477 Identities=61% Similarity=1.047 Sum_probs=452.5
Q ss_pred CCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHH
Q 009035 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l 140 (546)
.+.++++||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||+.+ .|+++|.++|.++|+++++.|
T Consensus 3 ~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l 82 (481)
T cd07141 3 EIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLI 82 (481)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHH
Confidence 4667789999999987778899999999999999999999999999999999999742 599999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHH
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (546)
+++.++|++++++|+|||+.++...|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+...
T Consensus 83 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 162 (481)
T cd07141 83 ERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMA 162 (481)
T ss_pred HHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHH
Confidence 99999999999999999997765569999999999999999888775544333445688999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+++..|+.|+++|.|+||||+.+|+.|++
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987788999999999999999999999999999
Q ss_pred HHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 301 ~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
.++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 322 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPF 322 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 88754789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
|+++++||+++..+++++.++|++++++|+++++||+..+..|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 323 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 402 (481)
T cd07141 323 DPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDE 402 (481)
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHH
Confidence 99999999999999999999999999999999999987556799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
||+++|+++|||+++|||+|.+++.++++++++|+||||+++..++.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 403 ai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 403 VIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred HHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 999999999999999999999999999999999999999987778889999999999999999999999999999875
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-101 Score=835.07 Aligned_cols=470 Identities=45% Similarity=0.797 Sum_probs=448.4
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++|.++
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL 79 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999877788999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|++++++|+|||+.++...|+..+++.++|++.+++...+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999987669999999999999988877665444334456788999999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.++++.|+.||++++|+||||+.+|+.|++.+++ +
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~ 237 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence 999999999999999999999999999996 99999999999888899999999999999999999999999999887 7
Q ss_pred CcceEeecCCcCcEEEecCC-----CHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 307 LKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dA-----Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+||+++|+|||||+||++|| |+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|+|
T Consensus 238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (480)
T cd07559 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD 317 (480)
T ss_pred CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+++++||+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 397 (480)
T cd07559 318 PETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKD 397 (480)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCC
Confidence 999999999999999999999999999999999997643 4699999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
++|||+++|+++|||+++|||+|.+++.++++++++|+||||+++..++.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 398 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 477 (480)
T cd07559 398 EEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNIL 477 (480)
T ss_pred HHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998777788999999999999999999999999999998
Q ss_pred EeC
Q 009035 538 TAL 540 (546)
Q Consensus 538 ~~~ 540 (546)
++|
T Consensus 478 ~~~ 480 (480)
T cd07559 478 VSY 480 (480)
T ss_pred EeC
Confidence 764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-101 Score=834.97 Aligned_cols=473 Identities=44% Similarity=0.767 Sum_probs=448.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
++.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++ .|+.+|.++|.++|++++++|+++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRER 82 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 345789999999876788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++..|+..+++.++|++.+++.+.+...+...+...+++++|+|||++|+|||||+...+++
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~ 162 (488)
T PRK13252 83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWK 162 (488)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHH
Confidence 99999999999999999987669999999999999998877665444333445688999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+. .++.|+.||++|.|+||||+++|+.|.+.++
T Consensus 163 ~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa 241 (488)
T PRK13252 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241 (488)
T ss_pred HHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998765 8999999999999999999999999999888
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++
T Consensus 242 ~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 242 A-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred h-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 7 799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
+++||+++.+++++++++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|++
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ 400 (488)
T PRK13252 321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDED 400 (488)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHH
Confidence 9999999999999999999999999999999996432 369999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.+++.++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 401 eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 401 EVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999999776677899999999999999999999999999999876
Q ss_pred C
Q 009035 540 L 540 (546)
Q Consensus 540 ~ 540 (546)
.
T Consensus 481 ~ 481 (488)
T PRK13252 481 M 481 (488)
T ss_pred C
Confidence 4
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-101 Score=829.92 Aligned_cols=469 Identities=45% Similarity=0.796 Sum_probs=445.8
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||. .|+.+|.++|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL 79 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 469999999877778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|++++++|+|||+.+++..|+..+++.++||+.++.+..+...+...+...+++++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999987669999999999999888776665433333445688999999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|.+.+++..|+.|+++|.|+||||+.+|+.|.+.+++ +
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~ 237 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K 237 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence 999999999999999999999999999985 99999999999888899999999999999999999999999999887 8
Q ss_pred CcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCcc
Q 009035 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386 (546)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~ 386 (546)
++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++
T Consensus 238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~ 317 (475)
T cd07117 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM 317 (475)
T ss_pred CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHH
Q 009035 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 462 (546)
Q Consensus 387 Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai 462 (546)
||+++.++++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||
T Consensus 318 gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai 397 (475)
T cd07117 318 GAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVI 397 (475)
T ss_pred cCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHH
Confidence 9999999999999999999999999999997532 368999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 463 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 463 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+++|+++|||+++|||+|.+++.++++++++|+||||+++..++.+||||+|.||+|+++|.+|+++||+.|++++.
T Consensus 398 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 398 DMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred HHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 99999999999999999999999999999999999999877788899999999999999999999999999999765
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-101 Score=829.48 Aligned_cols=474 Identities=43% Similarity=0.739 Sum_probs=448.9
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhc-----ccCCCCCCCHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-----DEGPWPRMTAYERSKIILRFA 137 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~-----~~~~W~~~~~~~R~~~L~~~a 137 (546)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|++++
T Consensus 5 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a 82 (503)
T PLN02467 5 VPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIA 82 (503)
T ss_pred cCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHH
Confidence 344578999999987677899999999999999999999999999999999999 6 899999999999999999
Q ss_pred HHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCccc---CCC-CCCceeeeeccceeEEEEcCc
Q 009035 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PAD-GPYHVQTLHEPIGVAGQIIPW 213 (546)
Q Consensus 138 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~---~~~-~~~~~~~~~~P~GVv~~i~p~ 213 (546)
++|++++++|++++++|+|||+.+++. |+..+++.++||+.+++++.+... ... .+...+++++|+|||++|+||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 161 (503)
T PLN02467 83 AKITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPW 161 (503)
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCC
Confidence 999999999999999999999999885 999999999999999988866532 111 133568899999999999999
Q ss_pred cchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCch
Q 009035 214 NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (546)
Q Consensus 214 n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 293 (546)
|||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.|++||.|+||||+.
T Consensus 162 N~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~ 241 (503)
T PLN02467 162 NYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA 241 (503)
T ss_pred ChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHH
Confidence 99999999999999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh
Q 009035 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (546)
Q Consensus 294 ~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~ 373 (546)
+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus 242 ~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 320 (503)
T PLN02467 242 TGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKN 320 (503)
T ss_pred HHHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999887 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEE
Q 009035 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 451 (546)
Q Consensus 374 ~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~ 451 (546)
+++|||.|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++
T Consensus 321 l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~ 400 (503)
T PLN02467 321 IKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLC 400 (503)
T ss_pred cCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEE
Confidence 99999999999999999999999999999999999999999997532 3689999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 009035 452 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 531 (546)
Q Consensus 452 v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~ 531 (546)
|++|+|.||||+++|+++|||+++|||+|.+++.++++++++|+||||+++..++.+||||+|.||+|+++|.+++++||
T Consensus 401 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft 480 (503)
T PLN02467 401 VKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYL 480 (503)
T ss_pred EEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999997766778999999999999999999999999
Q ss_pred eeeEEEEeC
Q 009035 532 QVKAVVTAL 540 (546)
Q Consensus 532 ~~k~v~~~~ 540 (546)
+.|+++..+
T Consensus 481 ~~k~i~~~~ 489 (503)
T PLN02467 481 SVKQVTKYI 489 (503)
T ss_pred CeEEEEEec
Confidence 999998864
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-101 Score=829.24 Aligned_cols=469 Identities=28% Similarity=0.487 Sum_probs=440.5
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
+..++||||+|+.+ +.+++++||.||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|+++
T Consensus 19 ~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
T PLN02315 19 RNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRAK 94 (508)
T ss_pred cccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhH
Confidence 45578999999864 67899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.+++ .|+..+++.++|++..++++.+...+.. .+...+..++|+|||++|+|||||+.++++
T Consensus 95 ~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 173 (508)
T PLN02315 95 LDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGW 173 (508)
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHH
Confidence 99999999999999999987 4999999999999998888766544432 234457789999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~----l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
++++||++||+||+|||+.+|+++.. +.+++.++|+|+|++|+++| +.+.+..|..||++|+|+||||+++|+.|
T Consensus 174 ~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v 252 (508)
T PLN02315 174 NACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV 252 (508)
T ss_pred HHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 99999999999999999999999887 67888999999999999998 77889999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+
T Consensus 253 ~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~ 331 (508)
T PLN02315 253 QQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGD 331 (508)
T ss_pred HHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 998887 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 332 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~ 410 (508)
T PLN02315 332 PLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTL 410 (508)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCH
Confidence 99999999999999999999999999999999999999865557999999999 59999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHHH--HhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLMR--ALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~--~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
||||+++|+++|||+++|||+|.++++++++ ++++|+||||+.+. ..+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 411 deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~ 490 (508)
T PLN02315 411 EEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEE
Confidence 9999999999999999999999999999985 79999999998654 34679999999999999999999999999999
Q ss_pred EEEeC
Q 009035 536 VVTAL 540 (546)
Q Consensus 536 v~~~~ 540 (546)
|+.++
T Consensus 491 v~~~~ 495 (508)
T PLN02315 491 CTINY 495 (508)
T ss_pred EEEec
Confidence 98765
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-100 Score=827.40 Aligned_cols=468 Identities=40% Similarity=0.676 Sum_probs=442.1
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~-W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
++||||+|+. ++++++++||.||+++++++.++.+|+++++++|++||. . |+++|.++|.++|++++++|+++.+
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 77 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD 77 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 5799999986 468899999999999999999999999999999999998 7 9999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC----CCCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
+|++++++|+|||..++...|+..+++.+++++..+++..+...+. ..+...+..++|+|||++|+|||||+...+
T Consensus 78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~ 157 (481)
T TIGR03216 78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT 157 (481)
T ss_pred HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence 9999999999999998865699999999999999887765544321 113356788999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCch-hHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+++|.+. +.++.|..||+||.|+||||+.+|+.|++
T Consensus 158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998665 58899999999999999999999999999
Q ss_pred HHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 301 ~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
.+++ +++|+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 238 ~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9887 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC-----CCCceecceeeccCCCCCcccccccccceEEEEEe
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~ 455 (546)
++++++||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999999997532 36999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 456 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
+|++|||+++|+++|||+++|||+|.+++.++++++++|+||||++...++.+||||+|.||+|+++|.+++++||+.|+
T Consensus 397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~ 476 (481)
T TIGR03216 397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTN 476 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEEe
Q 009035 536 VVTA 539 (546)
Q Consensus 536 v~~~ 539 (546)
|+.+
T Consensus 477 v~~~ 480 (481)
T TIGR03216 477 VCIK 480 (481)
T ss_pred EEEe
Confidence 9764
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-100 Score=824.60 Aligned_cols=473 Identities=54% Similarity=0.940 Sum_probs=447.9
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~-~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+.++.+++++||.||+++++++.++.+|+++|+++|++||.. .|+ .+|.++|.++|+++++.|++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~ 85 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL 85 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence 36799999998767788999999999999999999999999999999999972 499 9999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
++|++++++|+|||+.+....|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999976655699999999999999998776654433334456789999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+++..|..||++|.|+||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877889999999999999999999999999998885
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
.+++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
++||+++..+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|++|||++
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 405 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKR 405 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999865557899999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+|+++|||+++|||+|.+.+.++++++++|+||||+++...+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 406 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 406 ANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999999888788899999999999999999999999999999865
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-100 Score=824.06 Aligned_cols=468 Identities=43% Similarity=0.738 Sum_probs=441.2
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM 79 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999877788999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|+.++++|+|||+.++...|+..+++.++||+..+++..+...+...+...++.++|+|||++|+|||||+.+.++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999887569999999999999988776655433333445688999999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+.+..|+.||+||+|+||||+++|+.|.+.+++ +
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~ 237 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-N 237 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-C
Confidence 999999999999999999999999999998 99999999999878899999999999999999999999999999987 7
Q ss_pred CcceEeecCCcCcEEEecC------CCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 307 LKPVTLELGGKSPFIVCED------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 307 ~~pv~lelgG~~p~iV~~d------ADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
++|+++|+|||||+||++| ||+|.|++.++++. +|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (479)
T cd07116 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL 316 (479)
T ss_pred CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8999999999999999998 79999999999864 6999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
++++.+||+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++ +|.+++||+||||++|++|+
T Consensus 317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~ 395 (479)
T cd07116 317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFK 395 (479)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeC
Confidence 9999999999999999999999999999999999997532 368999999999874 99999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEE
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v 536 (546)
|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+++...+.+||||+|.||+|+++|.++|++||+.|++
T Consensus 396 ~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~ 475 (479)
T cd07116 396 DEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNL 475 (479)
T ss_pred CHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999999877777899999999999999999999999999999
Q ss_pred EEeC
Q 009035 537 VTAL 540 (546)
Q Consensus 537 ~~~~ 540 (546)
+++|
T Consensus 476 ~~~~ 479 (479)
T cd07116 476 LVSY 479 (479)
T ss_pred EEeC
Confidence 8754
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-100 Score=824.41 Aligned_cols=469 Identities=43% Similarity=0.747 Sum_probs=444.8
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++.+++++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 79 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE 79 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 469999999876678999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhh-HhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD-KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~-~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
|++++++|+|||+.+++ .|+..+++.++|++..++ ...+...+.. ....+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 99999999999999988 499999999999998887 3444433332 34567899999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+.++.|..|++||.|+||||+++|+.|++.++.
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~- 236 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD- 236 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999888888999999999999999999999999999887
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (488)
T TIGR02299 237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316 (488)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC-------CCCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-------~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
+||+++.++++++.++|++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 396 (488)
T TIGR02299 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDE 396 (488)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCH
Confidence 99999999999999999999999999999997532 25899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
+|||+++|+++|||++||||+|.++++++++++++|+||||+....++.+||||+|.||+|+++|.+++++||+.|+++.
T Consensus 397 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~ 476 (488)
T TIGR02299 397 EEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL 476 (488)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEE
Confidence 99999999999999999999999999999999999999999877777789999999999999999999999999999988
Q ss_pred eC
Q 009035 539 AL 540 (546)
Q Consensus 539 ~~ 540 (546)
++
T Consensus 477 ~~ 478 (488)
T TIGR02299 477 AL 478 (488)
T ss_pred ec
Confidence 76
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-99 Score=820.52 Aligned_cols=474 Identities=41% Similarity=0.716 Sum_probs=447.8
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.+.|+.+|..+|.++|++++++|+++.
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 98 (494)
T PRK09847 19 ENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHA 98 (494)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 34579999999877788999999999999999999999999999999999997446999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
++|++++++|+|||+.++...|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 99 ~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 178 (494)
T PRK09847 99 EELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKL 178 (494)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHH
Confidence 99999999999999988765699999999999999988887665443334456889999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.+.+..|+.|+++|.|+||||+.+|+.|.+.++.
T Consensus 179 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~ 258 (494)
T PRK09847 179 GPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGD 258 (494)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999998884
Q ss_pred cCCcceEeecCCcCcEEEecCC-CHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dA-Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
.+++|+++|+||+||+||++|+ |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 259 ~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 338 (494)
T PRK09847 259 SNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPA 338 (494)
T ss_pred hCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 4789999999999999999997 999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++| ++++||... ..+.|++|||+.+++++|++++||+||||++|++|+|++|||+
T Consensus 339 ~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 416 (494)
T PRK09847 339 TTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQ 416 (494)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHH
Confidence 99999999999999999999999999 999998753 3578999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
++|+++|||+++|||+|.+++.++++++++|+||||+++...+.+||||+|.||+|+++|.+++++||+.|+|++..
T Consensus 417 ~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 493 (494)
T PRK09847 417 LANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISL 493 (494)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999998777788999999999999999999999999999998754
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-99 Score=819.42 Aligned_cols=468 Identities=35% Similarity=0.519 Sum_probs=441.2
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||+||++|++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE 79 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999876678999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
|++++++|+|||+.+++. |+..+++.++|++..++...+...+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 158 (478)
T cd07085 80 LARLITLEHGKTLADARG-DVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP 158 (478)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 999999999999999875 99999999999998877766655432 2244578999999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..|+++|.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.|++.+++
T Consensus 159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~- 236 (478)
T cd07085 159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA- 236 (478)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999998 45678999999999999999999999999998887
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 316 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD 316 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+||+++.++++++.++|++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+|||
T Consensus 317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 396 (478)
T cd07085 317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEA 396 (478)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997532 36899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhheeeEEEE
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g--~~~g~~~l~~~~~~k~v~~ 538 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|.+++++||+.|+|+.
T Consensus 397 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~ 476 (478)
T cd07085 397 IAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTS 476 (478)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999987543 367899999999999 5789999999999999976
Q ss_pred e
Q 009035 539 A 539 (546)
Q Consensus 539 ~ 539 (546)
.
T Consensus 477 ~ 477 (478)
T cd07085 477 R 477 (478)
T ss_pred e
Confidence 5
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-99 Score=819.04 Aligned_cols=470 Identities=45% Similarity=0.780 Sum_probs=447.1
Q ss_pred eecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 009035 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (546)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (546)
||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||+++.|+.+|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 69999998766789999999999999999999999999999999999975569999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHh
Q 009035 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228 (546)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 228 (546)
+++++|+|||+.+++. |+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999886 999999999999999887666554433445678999999999999999999999999999999
Q ss_pred hcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCc
Q 009035 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308 (546)
Q Consensus 229 aaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~ 308 (546)
++||+||+|||+.+|+++.+++++|.++|+|+|++|++++++.+.++.|+.||++|+|.||||+++|+.|++.+++ +++
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~ 238 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVK 238 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999999999777789999999999999999999999999999887 789
Q ss_pred ceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 009035 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388 (546)
Q Consensus 309 pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gp 388 (546)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|.++++++||
T Consensus 239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp 318 (482)
T cd07119 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP 318 (482)
T ss_pred cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 389 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 398 (482)
T cd07119 319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRL 398 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHH
Confidence 99999999999999999999999999997532 26899999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+|+++|||+++|||+|.+.+.++++++++|+|+||+.+...+.+||||+|.||+|+++|++|+++||+.|+++.+.
T Consensus 399 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 399 ANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999999999999999999999999999997777788999999999999999999999999999998876
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-99 Score=818.12 Aligned_cols=472 Identities=64% Similarity=1.062 Sum_probs=447.7
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
.++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||....|+.+|.++|.++|+++++.|+++.+
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46799999998767789999999999999999999999999999999999993225599999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
+|++++++|+|||+.+....|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 163 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA 163 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence 99999999999998776666999999999999999887766654444455678999999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|..|+++|.|+||||+.+|+.|++.++..
T Consensus 164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~ 243 (476)
T cd07091 164 PALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243 (476)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999988865
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|.+++++
T Consensus 244 ~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~ 323 (476)
T cd07091 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTF 323 (476)
T ss_pred CCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 465 (546)
+||+++..+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++
T Consensus 324 ~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 403 (476)
T cd07091 324 QGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERA 403 (476)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHH
Confidence 99999999999999999999999999999998655678999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 466 N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|+++|||+++|||+|.+++.++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 404 n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 404 NDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999998888888999999999999999999999999999985
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-99 Score=818.83 Aligned_cols=471 Identities=52% Similarity=0.878 Sum_probs=445.4
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~-W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+.++.+++++||+||++|++++.++.+|+++++++|++||+ . |+.+|.++|.++|+++++.|+++.
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 85 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKNR 85 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3679999999876678899999999999999999999999999999999998 5 889999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
++|++++++|+|||..++...|+..+++.++|++.++++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 165 (484)
T cd07144 86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL 165 (484)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence 99999999999999877655599999999999999998886654443334456889999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|.+.+.++.|..||++|.|+||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~ 245 (484)
T cd07144 166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ 245 (484)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999887
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh-cccCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGG 383 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~-~~vG~p~~~~ 383 (546)
+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++++ +++|+|++++
T Consensus 246 -~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~ 324 (484)
T cd07144 246 -NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD 324 (484)
T ss_pred -cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999985 8999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC---CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
+++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|++|
T Consensus 325 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 404 (484)
T cd07144 325 TVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEE 404 (484)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHH
Confidence 9999999999999999999999999999999997543 3689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
||+++|+++|||+++|||+|.+++.++++++++|+||||+.+..++.+||||+|.||+|+++|.+++++||+.|+|+.+
T Consensus 405 ai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 405 AIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999999877778899999999999999999999999999999764
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-99 Score=817.87 Aligned_cols=469 Identities=39% Similarity=0.693 Sum_probs=444.7
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
.++||||+|+.+ ++++++++||.||++|++++.++.+|+++++++|++||+ .|++++.++|.++|+++++.|+++++
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 79 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD 79 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 467999999875 678999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
+|++++++|+|||+.++...|+..+++.+++++..++.+.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i 159 (475)
T PRK13473 80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL 159 (475)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence 9999999999999988865699999999999999888776543221 123346789999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+++..|+.|+++|.|+||||+++|+.|.+.++.
T Consensus 160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~ 238 (475)
T PRK13473 160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238 (475)
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999 99999999999888899999999999999999999999999999887
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 239 -~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 239 -SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCC-CeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
++||+++.++++++.++|+++.++| +++++||......|+|++|||+.+++++|.+++||+||||++|++|+|+||||+
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~ 397 (475)
T PRK13473 318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVR 397 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHH
Confidence 9999999999999999999999999 999999986544689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|++++.
T Consensus 398 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~ 473 (475)
T PRK13473 398 WANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVK 473 (475)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEe
Confidence 9999999999999999999999999999999999999877777899999999999999999999999999998764
|
|
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-99 Score=813.41 Aligned_cols=466 Identities=35% Similarity=0.600 Sum_probs=441.4
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (546)
+||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL 77 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999865 67899999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
++++++|+|||+.+++. |+..+++.++|++..++++.+...+.. .+...++.++|+|||++|+|||||+...++++++
T Consensus 78 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 78 GRLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred HHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 99999999999999885 999999999999999888776544322 2335678999999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
||++||+||+|||+.+|+++..+++++.++ |+|+|++|+++|++. .+..|..||++|.|+||||+++|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999998665 889999999999999999999999999998
Q ss_pred hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
++ +++|+++|+|||||+||++|||++.|++.|++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 236 a~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 314 (478)
T cd07086 236 AR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE 314 (478)
T ss_pred hc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 87 78999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC--CCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
++++||+++..+++++.++|++++++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 315 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~de 394 (478)
T cd07086 315 GTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEE 394 (478)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHH
Confidence 999999999999999999999999999999999976443 689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHH--hceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~--l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
||+++|+++|||+++|||+|.+++++++++ +++|+||||+.+. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 395 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~ 474 (478)
T cd07086 395 AIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCT 474 (478)
T ss_pred HHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEE
Confidence 999999999999999999999999999999 9999999998754 3468999999999999999999999999999998
Q ss_pred Ee
Q 009035 538 TA 539 (546)
Q Consensus 538 ~~ 539 (546)
++
T Consensus 475 ~~ 476 (478)
T cd07086 475 IN 476 (478)
T ss_pred Ee
Confidence 75
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-99 Score=818.18 Aligned_cols=474 Identities=30% Similarity=0.439 Sum_probs=440.7
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE- 141 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~- 141 (546)
...++||||+|+.+ ++.+++++||.| |+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|+
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~~ 106 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLSG 106 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHh
Confidence 45578999999975 567899999997 899999999999999999999999999 8999999999999999999999
Q ss_pred HcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCccc-CCCCCCceeeeeccc-eeEEEEcCccchHHH
Q 009035 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEPI-GVAGQIIPWNFPLLM 219 (546)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~-~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~ 219 (546)
+++++|++++++|+||++.+++..++..+++.++|++.+++++.+... ....+..+++.++|+ |||++|+|||||+..
T Consensus 107 ~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~ 186 (533)
T TIGR01236 107 PYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIA 186 (533)
T ss_pred hcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHH
Confidence 599999999999999999998764499999999999999887765433 222345578899999 999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
..+++++|| +||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|+
T Consensus 187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999 7999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHHhhcCCc------ceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh
Q 009035 300 QLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (546)
Q Consensus 300 ~~aa~~~~~------pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~ 373 (546)
+.+++ +++ ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 266 ~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE 344 (533)
T ss_pred HHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence 99887 666 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCC--CeEecCCcccCCCCceecceeeccCCCCCcccccccccceEE
Q 009035 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG--AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 451 (546)
Q Consensus 374 ~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~G--a~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~ 451 (546)
+++|+|.|+++++||+++.++++++.++|++++++| +++++||......|+|++|||+.+++++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 999999999999999999999999999999999987 799999976444689999999999999999999999999999
Q ss_pred EEEeCC--HHHHHHHH-HcCCCCceEEEEcCCHHHHHHHHHHhc--eeEEEEcCCCCC--CCCCCccCCCCCCCC-Ccch
Q 009035 452 ILKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKG 523 (546)
Q Consensus 452 v~~~~~--~~eai~~~-N~~~~gL~a~v~t~d~~~a~~~~~~l~--~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g 523 (546)
|++|+| ++|||+++ |+++|||+++|||+|.+++.+++++|+ +|+||||+.+.. .+.+||||+|.||+| +++|
T Consensus 425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g 504 (533)
T TIGR01236 425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGG 504 (533)
T ss_pred EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCC
Confidence 999998 49999999 889999999999999999999999977 999999976543 367899999999998 9999
Q ss_pred HHHHHhhheeeEEEEeCCC
Q 009035 524 SYSLSNYLQVKAVVTALKN 542 (546)
Q Consensus 524 ~~~l~~~~~~k~v~~~~~~ 542 (546)
.++|++|++.|++++..-.
T Consensus 505 ~~~l~~f~~~k~v~~~~~~ 523 (533)
T TIGR01236 505 PLNLLRWTSARSIKETFVP 523 (533)
T ss_pred HHHHHHhcceEEEEEEccc
Confidence 9999999999999876543
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-99 Score=807.74 Aligned_cols=455 Identities=28% Similarity=0.475 Sum_probs=429.7
Q ss_pred CCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCCh
Q 009035 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF 159 (546)
Q Consensus 80 ~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 159 (546)
.++++++||+||++|++++.++.+|+++++++|++||+ .|++++.++|.++|++++++|+++.++|++++++|+|||+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 83 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI 83 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence 36789999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred hhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecC
Q 009035 160 EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239 (546)
Q Consensus 160 ~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 239 (546)
.+++. |+..+++.++||+..+++..+.......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 84 ~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs 162 (462)
T PRK13968 84 NQARA-EVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA 162 (462)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 99875 99999999999998877664432222223456889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCc
Q 009035 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319 (546)
Q Consensus 240 ~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p 319 (546)
+.+|+++..+++++.++|+|+|++|+++|++.+. ..|+.||++|.|+||||+++|+.|++.++. ++||+++|+|||||
T Consensus 163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~-~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p 240 (462)
T PRK13968 163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGV-SQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDP 240 (462)
T ss_pred CcChHHHHHHHHHHHHcCcCcCcEEEEecCchhh-HHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCc
Confidence 9999999999999999999999999999866544 458899999999999999999999999887 89999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHH
Q 009035 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (546)
Q Consensus 320 ~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~ 399 (546)
+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.
T Consensus 241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~ 320 (462)
T PRK13968 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELH 320 (462)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC
Q 009035 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479 (546)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~ 479 (546)
+++++++.+|+++++||......|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 321 ~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~ 400 (462)
T PRK13968 321 HQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTT 400 (462)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcC
Confidence 99999999999999999764446899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 480 d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|.+.+.++++++++|+||||+.+..++.+||||+|.||+|+++|.+||++||+.|+|++.
T Consensus 401 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 401 DETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 999999999999999999999877778899999999999999999999999999999764
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-99 Score=812.36 Aligned_cols=465 Identities=42% Similarity=0.696 Sum_probs=439.8
Q ss_pred CceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
++||||+|+.+. ..++++||. ||+++++++.++.+|++++++.|++||+ .|++++.++|.++|+++++.|+++.+
T Consensus 2 ~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 77 (473)
T cd07097 2 RNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARKE 77 (473)
T ss_pred CceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 579999999763 347999999 5999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
+|++++++|+|||+.+++. |+..+++.++||+..+++..+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 78 ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i 156 (473)
T cd07097 78 ELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156 (473)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence 9999999999999999886 99999999999999888776654332 234557899999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++..|+.|+++++|.||||+.+|+.|++.+++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (473)
T cd07097 157 APALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAA 236 (473)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999878899999999999999999999999999999887
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 237 -~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 315 (473)
T cd07097 237 -RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGV 315 (473)
T ss_pred -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 462 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai 462 (546)
++|||++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||
T Consensus 316 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai 395 (473)
T cd07097 316 DIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEAL 395 (473)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHH
Confidence 999999999999999999999999999999997543 358999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC-CCCCCCccCCCCCCCC-CcchHHHHHhhheeeEEE
Q 009035 463 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 463 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~ 537 (546)
+++|+++|||+++|||+|.+++.++++++++|+||||+.+. ..+.+||||+|.||+| +++|.+++++||+.|+|+
T Consensus 396 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 396 AIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999999998654 3468999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-98 Score=810.31 Aligned_cols=463 Identities=44% Similarity=0.779 Sum_probs=440.5
Q ss_pred eecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 009035 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (546)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (546)
||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 78 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA 78 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999876678999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHh
Q 009035 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228 (546)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 228 (546)
+++++|+|||+.++...|+..+++.++|++..+++..+...+...+...+..++|+|||++|+|||||+...++++++||
T Consensus 79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 158 (467)
T TIGR01804 79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158 (467)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999998556999999999999999888766544333234568899999999999999999999999999999
Q ss_pred hcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCc
Q 009035 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308 (546)
Q Consensus 229 aaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~ 308 (546)
++||+||+|||+.+|+++..++++|.++|+|+|++|+++|.+.++++.|+.|+++|+|.||||+++|+.|.+.++. ++|
T Consensus 159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~ 237 (467)
T TIGR01804 159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLK 237 (467)
T ss_pred hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999999999778899999999999999999999999999999887 789
Q ss_pred ceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 009035 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388 (546)
Q Consensus 309 pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gp 388 (546)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 317 (467)
T TIGR01804 238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP 317 (467)
T ss_pred cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 389 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 318 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~ 397 (467)
T TIGR01804 318 LISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIAR 397 (467)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHH
Confidence 99999999999999999999999999997532 25899999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheee
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k 534 (546)
+|+++|||+++|||+|.+++.++++++++|+||||+++...+.+||||+|+||+|+++|.+++++||+.|
T Consensus 398 ~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 398 ANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9999999999999999999999999999999999998777778999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-98 Score=815.38 Aligned_cols=469 Identities=29% Similarity=0.433 Sum_probs=436.8
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH-
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER- 142 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~- 142 (546)
..++||||+|+.+ +.+++++||+| |+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++
T Consensus 32 ~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 107 (522)
T cd07123 32 EIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSGK 107 (522)
T ss_pred ccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhh
Confidence 3468999999874 57899999995 999999999999999999999999999 89999999999999999999996
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccc-eeEEEEcCccchHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVAGQIIPWNFPLLMF 220 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~ 220 (546)
++++|+.++++|+|||+.++...|+..+++.++|++.+++++.+...+. ..+...++.++|+ |||++|+|||||+...
T Consensus 108 ~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 108 YRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred CHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHH
Confidence 8999999999999999998866688899999999999888776543322 2244578899998 9999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
.++++||| +||+||+|||+.+|+++..|+++|.++|+|+|++|+++|++.+++..|+.|++|++|+||||+++|+.|++
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~ 266 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK 266 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 69999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhcCCc------ceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhc
Q 009035 301 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (546)
Q Consensus 301 ~aa~~~~~------pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~ 374 (546)
.++. +++ ++++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 267 ~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 345 (522)
T cd07123 267 QIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI 345 (522)
T ss_pred HHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence 9887 666 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhC-CCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEE
Q 009035 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453 (546)
Q Consensus 375 ~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~ 453 (546)
++|+|+|+++++||+++.++++++.++|++++++ |+++++||.....+|+|++|||+.+++++|++++||+||||++|+
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 425 (522)
T cd07123 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVY 425 (522)
T ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEE
Confidence 9999999999999999999999999999999999 999999997544468999999999999999999999999999999
Q ss_pred EeCC--HHHHHHHHHcCC-CCceEEEEcCCHHHHHHHHHHh--ceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHH
Q 009035 454 KYKD--LDEVIQRSNASQ-YGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSY 525 (546)
Q Consensus 454 ~~~~--~~eai~~~N~~~-~gL~a~v~t~d~~~a~~~~~~l--~~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g~~ 525 (546)
+|+| ++|||+++|++. |||++||||+|.+++.++++++ ++|+||||+.+.. .+.+||||+|.||+| +++|.+
T Consensus 426 ~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~ 505 (522)
T cd07123 426 VYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPL 505 (522)
T ss_pred EeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHH
Confidence 9984 799999999985 9999999999999999999997 5999999986543 357899999999996 999999
Q ss_pred HHHhhheeeEEEEe
Q 009035 526 SLSNYLQVKAVVTA 539 (546)
Q Consensus 526 ~l~~~~~~k~v~~~ 539 (546)
++++|++.|++++.
T Consensus 506 ~l~~~~~~k~~~~~ 519 (522)
T cd07123 506 NLLRWVSPRTIKET 519 (522)
T ss_pred HHHHhcceEEEEEe
Confidence 99999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-98 Score=807.45 Aligned_cols=464 Identities=31% Similarity=0.542 Sum_probs=434.1
Q ss_pred eecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 009035 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (546)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (546)
+|||+|+.+ +.+++++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 77 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG 77 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999984 47899999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHH
Q 009035 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (546)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (546)
+++++|+|||+.++.. |+..+++.++|++.+.+.+.+...+.. .+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 78 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 78 KLVSLEMGKILPEGLG-EVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 9999999999999874 999999999999988777665544322 23456788999999999999999999999999999
Q ss_pred hhcCCeEEEecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 228 LACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 228 LaaGN~VVlkps~~~p~t~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
|++||+||+|||+.+|+++..++++ |.++|+|+|++|+++|+ .+.++.|+.|++||+|.||||+++|+.|++.++
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999887766 46999999999999984 457899999999999999999999999999888
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++++
T Consensus 236 ~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred h-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.++++ |++++||+||||++|++|+|++|||+
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~ 393 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIA 393 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999986555689999999998776 99999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHH--hceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~--l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
++|+++|||+++|||+|.+++++++++ +++|+||||+.+. ..+.+||||+|.||+|+++|++++++|++.|++++.+
T Consensus 394 ~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 394 WNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 473 (474)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEec
Confidence 999999999999999999999999987 9999999998654 4578999999999999999999999999999987753
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-98 Score=813.98 Aligned_cols=467 Identities=38% Similarity=0.606 Sum_probs=442.2
Q ss_pred CceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
++||||+|+.+ +.+++++||+| |+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.+
T Consensus 34 ~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (512)
T cd07124 34 PLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRRRF 109 (512)
T ss_pred ceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 68999999973 57899999998 999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
+|++++++|+|||+.+++. |+..+++.++|++.++++..+...+...+...+++++|+|||++|+|||||+.+.+++++
T Consensus 110 ~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~ 188 (512)
T cd07124 110 ELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTT 188 (512)
T ss_pred HHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 9999999999999999886 999999999999999988865544433445678999999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.+.+..|..||++|.|+||||+.+|+.|++.++..
T Consensus 189 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~ 268 (512)
T cd07124 189 AALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKV 268 (512)
T ss_pred HHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999998863
Q ss_pred -----CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 306 -----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 306 -----~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.
T Consensus 269 ~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 348 (512)
T cd07124 269 QPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPE 348 (512)
T ss_pred cccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC--CCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
|+++++||++++.+++++.++|+++++ |+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 349 d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~ 427 (512)
T cd07124 349 DPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDF 427 (512)
T ss_pred CCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCH
Confidence 999999999999999999999999988 8999999976432 6899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhheeeE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKA 535 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~ 535 (546)
||||+++|+++|||+++|||+|.+.+.++++++++|+||||+.+. ..+.+||||+|.||+| +++|.+++++||+.|+
T Consensus 428 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~ 507 (512)
T cd07124 428 DEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKT 507 (512)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEE
Confidence 999999999999999999999999999999999999999998654 3357999999999999 8899999999999999
Q ss_pred EEEe
Q 009035 536 VVTA 539 (546)
Q Consensus 536 v~~~ 539 (546)
|+++
T Consensus 508 v~~~ 511 (512)
T cd07124 508 VTEN 511 (512)
T ss_pred EEEe
Confidence 9875
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-98 Score=803.62 Aligned_cols=451 Identities=34% Similarity=0.551 Sum_probs=428.6
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhh
Q 009035 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (546)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (546)
++++||.||+++++++.++.+|+++++++|++||. .|+.+|.++|.++|++++++|++++++|++++++|+|||+.++
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 80 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA 80 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence 78899999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred hhccchHHHHHHHHHHHHhhHhcCcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecC
Q 009035 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239 (546)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~a~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 239 (546)
.. |+..+++.++|++..+++..+..... ......++.++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus 81 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 81 KA-EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 75 99999999999999887765443211 123456889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCc
Q 009035 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319 (546)
Q Consensus 240 ~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p 319 (546)
+.+|+++.++++++.++|+|+|++|++++ +.+.+..|+.|+++++|+||||+++|+.|++.++. ++||+++|+|||||
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~ 237 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP 237 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence 99999999999999999999999999986 44567889999999999999999999999998887 89999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHH
Q 009035 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (546)
Q Consensus 320 ~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~ 399 (546)
+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||+++..+++++.
T Consensus 238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~ 317 (457)
T PRK09406 238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE 317 (457)
T ss_pred eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC
Q 009035 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479 (546)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~ 479 (546)
++|++++++|+++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+
T Consensus 318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 397 (457)
T PRK09406 318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTR 397 (457)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 99999999999999999875557999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 480 d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
|.+.+.++++++++|+||||+++..++.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 99999999999999999999988888889999999999999999999999999999864
|
|
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-98 Score=806.46 Aligned_cols=465 Identities=42% Similarity=0.706 Sum_probs=443.0
Q ss_pred eecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 009035 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (546)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (546)
||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.+|.++|.++|+++++.|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 78 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA 78 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999876788999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHH
Q 009035 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (546)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (546)
+++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus 79 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 79 KLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred HHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 9999999999999875 999999999999999887766544432 24467889999999999999999999999999999
Q ss_pred hhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCC
Q 009035 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (546)
Q Consensus 228 LaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 307 (546)
|++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+.++.|+.|+++|+|+||||+.+|+.|++.+++ ++
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~ 236 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NI 236 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999999999999877889999999999999999999999999999887 88
Q ss_pred cceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccc
Q 009035 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 387 (546)
Q Consensus 308 ~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~G 387 (546)
+|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC-CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009035 388 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 466 (546)
Q Consensus 388 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N 466 (546)
|+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|
T Consensus 317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 396 (468)
T cd07088 317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAN 396 (468)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHh
Confidence 999999999999999999999999999997543 4689999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 467 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 467 ~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+++|||+++|||+|.++++++++++++|+||||++....+..||||+|.||+|+++|++++++||+.|+|+
T Consensus 397 ~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 397 DSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999998766666799999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-98 Score=805.67 Aligned_cols=462 Identities=43% Similarity=0.686 Sum_probs=438.6
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (546)
+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l 78 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL 78 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999876778899999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHH
Q 009035 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (546)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (546)
++++++|+|||..+++..|+..+++.++|++..++++.+... ....++.++|+|||++|+|||||+.+.++++++|
T Consensus 79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999888756899999999999988876654321 2245778999999999999999999999999999
Q ss_pred hhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCC
Q 009035 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (546)
Q Consensus 228 LaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 307 (546)
|++||+||+|||+.+|+++.+++++|.++|+|+|++|+++|++.+++..|..||+++.|+||||+.+|+.|.+.++. ++
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~ 233 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TV 233 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999887 78
Q ss_pred cceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccc
Q 009035 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 387 (546)
Q Consensus 308 ~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~G 387 (546)
+|+++|+|||||+||++|||+|.|++.+++++|+++||.|++++|||||+++||+|+++|+++++++++|||.++++++|
T Consensus 234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 313 (466)
T cd07138 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG 313 (466)
T ss_pred CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC---CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 388 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 388 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
|+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 314 pli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 393 (466)
T cd07138 314 PLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAI 393 (466)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHH
Confidence 999999999999999999999999999996322 36899999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+|+++|||+++|||+|.+++.++++++++|+||||+.. .++.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 394 ~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 394 ANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999999999999864 5678999999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-98 Score=805.23 Aligned_cols=467 Identities=42% Similarity=0.707 Sum_probs=440.3
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (546)
+||||+|+.+.++++++++||+||++|++++.++.+|+++++++|++||+.+.|+.+|.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999876678899999999999999999999999999999999998545999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcc-cCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
++++++|+|||..++...|+..+++.++|++..+++..+.. .+...+...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 99999999999987766699999999999999887765432 22223455688999999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.|++++.|+||||+.+|+.|++.+++ +
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~ 238 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-R 238 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-c
Confidence 999999999999999999999999999999999999999998 56788999999999999999999999999999887 7
Q ss_pred CcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCcc
Q 009035 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386 (546)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~ 386 (546)
++|+++|+||+||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++
T Consensus 239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (471)
T cd07139 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI 318 (471)
T ss_pred CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 387 Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
||+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 398 (471)
T cd07139 319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI 398 (471)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHH
Confidence 9999999999999999999999999999997543 35899999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+|+++|||+++|||+|.+++.++++++++|+|+||+.+ .++.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 399 ~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999976 5678999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-97 Score=804.03 Aligned_cols=469 Identities=31% Similarity=0.469 Sum_probs=436.0
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
.+||||+|+.+ ++.+++++||.||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE 78 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence 36999999975 357899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|++++++|+|||+.+++. |+..+++.++|++.+..+..+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus 79 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 79 LAEVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 999999999999999875 9999999999998877666554433223445688999999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|+.||++|.|+||||+++|+.|++.++...
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999998 6678999999999999999999999999999877645
Q ss_pred CcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccch-HHHHHHHHHhhhhcccCCCC-CCCC
Q 009035 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPF-KGGI 384 (546)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~-d~f~~~L~~~~~~~~vG~p~-~~~~ 384 (546)
.+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|+ ++.+
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 678999999999999999999999999999999999999999999999999998 99999999999999999996 7889
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
++||+++.++++++.++|++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||||++
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~ 395 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRL 395 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999988755556899999999 69999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCCC
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 542 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~~ 542 (546)
+|+++|||+++|||+|.++++++++++++|+||||+... ..+.+||||+|.||+|+++|..+ .+|++.|+++..+..
T Consensus 396 ~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~~~ 473 (487)
T PRK09457 396 ANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLESDS 473 (487)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEeccc
Confidence 999999999999999999999999999999999998654 34679999999999999999555 559999999888644
|
|
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=801.83 Aligned_cols=461 Identities=38% Similarity=0.627 Sum_probs=437.3
Q ss_pred CEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHH
Q 009035 72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE 151 (546)
Q Consensus 72 G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 151 (546)
|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|+. .|+++|..+|.++|++++++|++++++|++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 78 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL 78 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 6788766678899999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhc
Q 009035 152 TWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230 (546)
Q Consensus 152 ~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 230 (546)
++|+|||+.++.. |+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.++++++||++
T Consensus 79 ~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 157 (465)
T cd07151 79 IRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL 157 (465)
T ss_pred HHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence 9999999999876 999999999999998887766544422 34457889999999999999999999999999999999
Q ss_pred CCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcc
Q 009035 231 GNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309 (546)
Q Consensus 231 GN~VVlkps~~~p~t~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~p 309 (546)
||+||+|||+.+|+++ ..+.+++.++|+|+|++|+++|++.+++..|+.||.+++|.||||+.+|+.|++.+++ +++|
T Consensus 158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~ 236 (465)
T cd07151 158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKK 236 (465)
T ss_pred CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCc
Confidence 9999999999999996 7899999999999999999999778899999999999999999999999999999887 8999
Q ss_pred eEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccC
Q 009035 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389 (546)
Q Consensus 310 v~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl 389 (546)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|.++++.+||+
T Consensus 237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 316 (465)
T cd07151 237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL 316 (465)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC
Q 009035 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 469 (546)
Q Consensus 390 ~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~ 469 (546)
++.++++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 317 i~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 393 (465)
T cd07151 317 INESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTE 393 (465)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCC
Confidence 99999999999999999999999999964 589999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 470 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 470 ~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|||+|.+++.++++++++|+||||+++.. .+.+||||+|.||+|+++|+++|++||+.|+++++
T Consensus 394 ~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 394 YGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred ccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999999999999999999999999999997654 36799999999999999999999999999998763
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-97 Score=803.28 Aligned_cols=469 Identities=42% Similarity=0.705 Sum_probs=443.4
Q ss_pred ceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
+||||+|+.+.++++++++||+| ++++++++.++.+|+++++++|++||. .|+.++.++|.++|++++++|+++.++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e 78 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE 78 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999876678999999999 689999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
|++++++|+|||+.+++. |+..+++.++|++...+++.+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus 79 la~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 157 (478)
T cd07131 79 LARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF 157 (478)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence 999999999999999875 999999999999998887766544322 233568999999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|.+.+.+..|+.||++|+|+||||+.+|+.|++.+++
T Consensus 158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~- 236 (478)
T cd07131 158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR- 236 (478)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999877789999999999999999999999999999887
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
+++|+++|+||+||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|++++.++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|+|+|||
T Consensus 317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea 396 (478)
T cd07131 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEA 396 (478)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997532 46899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhheeeEEEEe
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~~~ 539 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++.. .+.+||||+|.||+| +++|.+|+++||+.|+|+++
T Consensus 397 i~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 397 IEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 9999999999999999999999999999999999999997653 578999999999999 88999999999999999875
Q ss_pred C
Q 009035 540 L 540 (546)
Q Consensus 540 ~ 540 (546)
+
T Consensus 477 ~ 477 (478)
T cd07131 477 Y 477 (478)
T ss_pred C
Confidence 3
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=801.63 Aligned_cols=457 Identities=46% Similarity=0.768 Sum_probs=435.5
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
+.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.
T Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (480)
T cd07111 21 SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQKHQ 98 (480)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999999876678899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
++|++++++|+|||+.+++..|+..+++.+++++.+++...+ .+..++|+|||++|+|||||+.+.++++
T Consensus 99 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i 168 (480)
T cd07111 99 RLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKPVGVVGQIVPWNFPLLMLAWKI 168 (480)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccceecceEEEECCCccHHHHHHHHH
Confidence 999999999999999998766999999999999988765432 2345799999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ +.+..|+.|+++|.|+||||+.+|+.|.+.+++
T Consensus 169 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 169 CPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999865 678999999999999999999999999999887
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++
T Consensus 248 -~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 -TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred -cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
++||+++..+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 327 ~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 406 (480)
T cd07111 327 DMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVAL 406 (480)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHH
Confidence 99999999999999999999999999999998754457899999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
+|+++|||+++|||+|.+++.++++++++|+|+||+....++.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 407 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 407 ANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 99999999999999999999999999999999999987777889999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-98 Score=799.27 Aligned_cols=446 Identities=40% Similarity=0.689 Sum_probs=425.5
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||+++++++.++.+|++.++++|++||+ .|+.+|.++|.++|+++++.|+++.++|++++++|+|||+.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG 78 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 899999999999999999999999999999999999999999875
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCCh
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (546)
|+..+++.++|++.+.++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (448)
T TIGR01780 79 -EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP 157 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence 999999999999988887766544332 234557789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEE
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV 322 (546)
+++..+++++.++|+|+|++|+++|+ +.+.++.|+.||++++|+||||+.+|+.|++.++. ++||+++|+|||||+||
T Consensus 158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEE
Confidence 99999999999999999999999997 67889999999999999999999999999999887 78999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 009035 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (546)
Q Consensus 323 ~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i 402 (546)
++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.++|
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHH
Q 009035 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482 (546)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~ 482 (546)
++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~ 396 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA 396 (448)
T ss_pred HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 99999999999999765456899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheee
Q 009035 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534 (546)
Q Consensus 483 ~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k 534 (546)
+++++++++++|+||||++...++.+||||+|.||+|+++|.+++++||+.|
T Consensus 397 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 397 TIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 9999999999999999998777778999999999999999999999999976
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-97 Score=805.67 Aligned_cols=470 Identities=33% Similarity=0.541 Sum_probs=440.1
Q ss_pred CccCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
...++||||+|+.+ +.+++++||. ||+++++++.++.+|+++|++.|++||+ .|+++|.++|.++|++++++|++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 106 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMER 106 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 34468999999974 4579999999 5999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC-CCCCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
++++|++++++|+|||+.++.. |+..+++.++|++..+++..+...+ ...+...+++++|+|||++|+|||||+...+
T Consensus 107 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~ 185 (511)
T TIGR01237 107 RRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV 185 (511)
T ss_pred CHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence 9999999999999999999875 9999999999999998887654332 2234567889999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.+..|+.||+++.|.||||+.+|+.|++.
T Consensus 186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999878899999999999999999999999999998
Q ss_pred Hhh-----cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc
Q 009035 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (546)
Q Consensus 302 aa~-----~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v 376 (546)
++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 873 378999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
|+|.++++++||+++.++++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 999999999999999999999999999999998 7888887544568999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC--CCCCCccCCCCCCCCC-cchHHHHHhhhee
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR-EKGSYSLSNYLQV 533 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g~-~~g~~~l~~~~~~ 533 (546)
|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++.. .+.+||||+|.||+|+ ++|.+++++||+.
T Consensus 425 ~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~ 504 (511)
T TIGR01237 425 DFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQP 504 (511)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcce
Confidence 999999999999999999999999999999999999999999987543 3568999999999995 7999999999999
Q ss_pred eEEEEe
Q 009035 534 KAVVTA 539 (546)
Q Consensus 534 k~v~~~ 539 (546)
|+|+++
T Consensus 505 k~v~~~ 510 (511)
T TIGR01237 505 KTVTEN 510 (511)
T ss_pred EEEEEe
Confidence 999764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-96 Score=796.18 Aligned_cols=467 Identities=32% Similarity=0.481 Sum_probs=439.7
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||.||++|++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE 79 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999876778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
|+++++.|+|||+.++.. |+..+++.++|++..++.+.+...+.. .+...+.+++|+|||++|+|||||+.+.+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 80 IAELITAEHGKTHSDALG-DVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred HHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 999999999999999875 999999999999988887766554322 334567899999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|.+.++.
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~- 236 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA- 236 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999998 45678899999999999999999999999998877
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~ 315 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE 315 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc--C--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+||+++.++++++.++|++++++|+++++||... . .+|+|++|||+.+++++|.+++||+||||++|++|+|++||
T Consensus 316 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ea 395 (477)
T TIGR01722 316 MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEA 395 (477)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHH
Confidence 9999999999999999999999999999999752 1 35899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhheeeEEEE
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g--~~~g~~~l~~~~~~k~v~~ 538 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+.... .+.+||||+|.||+| +++|.+++++||+.|++++
T Consensus 396 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~ 475 (477)
T TIGR01722 396 IALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTT 475 (477)
T ss_pred HHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEE
Confidence 9999999999999999999999999999999999999985443 367899999999999 5889999999999999987
Q ss_pred e
Q 009035 539 A 539 (546)
Q Consensus 539 ~ 539 (546)
+
T Consensus 476 ~ 476 (477)
T TIGR01722 476 R 476 (477)
T ss_pred e
Confidence 5
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-96 Score=794.36 Aligned_cols=459 Identities=34% Similarity=0.523 Sum_probs=430.6
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++|+. .++..+|.++|++++++|+++.++
T Consensus 5 ~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~~e 77 (472)
T TIGR03250 5 ALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARKEE 77 (472)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhHHH
Confidence 6799999986 357899999999999999999999999999999988754 689999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC-----CCCCCceeeeeccc-eeEEEEcCccchHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMF 220 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~-----~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~ 220 (546)
|++++++|+|||+.+++. |+..+++.++|++..+.+..+...+ ...+...++.++|+ |||++|+|||||+...
T Consensus 78 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~ 156 (472)
T TIGR03250 78 ISDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQV 156 (472)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHH
Confidence 999999999999999875 9999999999999988776654332 11133567899998 9999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.+.+..|+.||+++.|.||||+.+|+.|++
T Consensus 157 ~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 157 AHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977888999999999999999999999999998
Q ss_pred HHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 301 ~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 237 ~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 313 (472)
T TIGR03250 237 RAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313 (472)
T ss_pred Hhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCC
Confidence 764 58999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
++++++||+++.+++++++++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 314 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 390 (472)
T TIGR03250 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDD 390 (472)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHH
Confidence 99999999999999999999999999999999999964 589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCC-CCCCccCCCCCCCC-CcchHHHHHhhheeeEEEE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~-~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~~ 538 (546)
||+++|+++|||+++|||+|.+++.++++++++|+||||+.+... +.+||||+|.||+| +++|.+++++||+.|+++.
T Consensus 391 ai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~ 470 (472)
T TIGR03250 391 AIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSL 470 (472)
T ss_pred HHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999999876544 45899999999999 6788999999999999976
Q ss_pred e
Q 009035 539 A 539 (546)
Q Consensus 539 ~ 539 (546)
+
T Consensus 471 ~ 471 (472)
T TIGR03250 471 P 471 (472)
T ss_pred e
Confidence 5
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-97 Score=791.14 Aligned_cols=450 Identities=36% Similarity=0.604 Sum_probs=427.8
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||+++++++.++.+|+++|++.|++||..+.|+. +..+|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999998434998 9999999999999999999999999999999999999886
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChH
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (546)
|+..+++.++||+.++++..+...+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 80 -Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 -EISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 9999999999999998887665443333456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEe
Q 009035 245 SALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (546)
Q Consensus 245 t~~~l~~~l~~-aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~ 323 (546)
++..+++++.+ +|+|+|++|+++|.+.++++.|+.||+++.|.||||+.+|+.|++.++. ++||+++|+||+||+||+
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~ 237 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF 237 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEEC
Confidence 99999999999 7999999999999888899999999999999999999999999999887 789999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 009035 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (546)
Q Consensus 324 ~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~ 403 (546)
+|+|+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..++++++++|+
T Consensus 238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 317 (455)
T cd07120 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE 317 (455)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEecCCcccC---CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCC
Q 009035 404 SGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480 (546)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~---~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d 480 (546)
+++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d 397 (455)
T cd07120 318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRD 397 (455)
T ss_pred HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999886433 268999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 481 ~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
.+.++++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 398 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 398 LARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 999999999999999999998877788999999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-96 Score=801.83 Aligned_cols=468 Identities=34% Similarity=0.561 Sum_probs=438.0
Q ss_pred ccCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+.+ +.+++++||+ ||++|++++.++.+|+++++++|++||+ .|++++.++|.++|++++++|+++
T Consensus 36 ~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 111 (514)
T PRK03137 36 DYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRRR 111 (514)
T ss_pred ccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence 3468999999974 5789999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCc-ccCCCCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.+++. |+..+++.++||+..+++.... ......+...+++++|+|||++|+|||||+...++
T Consensus 112 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 112 KHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 999999999999999999885 9999999999999988776422 22222345678999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.+.++.|+.|+++++|+||||+.+|+.|++.+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 270 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998788999999999999999999999999999988
Q ss_pred hhc-----CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccC
Q 009035 303 AKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (546)
Q Consensus 303 a~~-----~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG 377 (546)
+.. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 271 a~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g 350 (514)
T PRK03137 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVG 350 (514)
T ss_pred hcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCC
Confidence 752 579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+|.++. ++||+++..+++++.++|++++++ +++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 351 ~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 428 (514)
T PRK03137 351 NPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKD 428 (514)
T ss_pred CCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCC
Confidence 999998 999999999999999999999887 699999976555799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhheee
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 534 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k 534 (546)
++|||+++|+++|||+++|||+|.++++++++++++|+||||+.+.. .+.+||||+|.||+| +++|.+++++||+.|
T Consensus 429 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k 508 (514)
T PRK03137 429 FDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAK 508 (514)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEE
Confidence 99999999999999999999999999999999999999999986543 356899999999999 699999999999999
Q ss_pred EEEEe
Q 009035 535 AVVTA 539 (546)
Q Consensus 535 ~v~~~ 539 (546)
+|++.
T Consensus 509 ~v~~~ 513 (514)
T PRK03137 509 TVSEM 513 (514)
T ss_pred EEEEe
Confidence 98753
|
|
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-97 Score=797.81 Aligned_cols=461 Identities=27% Similarity=0.330 Sum_probs=420.4
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
++||||+|+.+. +++++++||.||+++++++.++ +|+++|+++|++| |+ .|+++|..+|.++|++++++|+++++
T Consensus 2 ~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~ 77 (513)
T cd07128 2 QSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE 77 (513)
T ss_pred ceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999864 6789999999999999999875 8999999999997 67 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcC--------cccCCCC-C-Cceeeeecc-ceeEEEEcCcc
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--------LTAPADG-P-YHVQTLHEP-IGVAGQIIPWN 214 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~--------~~~~~~~-~-~~~~~~~~P-~GVv~~i~p~n 214 (546)
+|+++ ++|+|||+.+++. |+..+++.++||+.++++..+ ...+... + ...++.++| +|||++|+|||
T Consensus 78 ~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 155 (513)
T cd07128 78 DLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN 155 (513)
T ss_pred HHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence 99996 8999999999875 999999999999999877642 2222211 1 235678999 59999999999
Q ss_pred chHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCch
Q 009035 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (546)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 293 (546)
||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.+++..| +.+|+|.||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999998654444433 5789999999999
Q ss_pred HHHHHHHHHh-hcCCcceEeecCCcCcEEEecCCC-----HHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHH
Q 009035 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (546)
Q Consensus 294 ~g~~i~~~aa-~~~~~pv~lelgG~~p~iV~~dAD-----l~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L 367 (546)
+|+.|++.++ ..+++|+++|||||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 9999999863 337899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc-------CCCCceecceeeccCCCC--C
Q 009035 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKDD--M 438 (546)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptv~~~v~~~--~ 438 (546)
+++++++++|+|+++++++|||++..+++++.++|+++++. +++++||... ..+|+|++|||+.+++++ |
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 9999999652 136899999999988874 8
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhc--eeEEEEcCCCC---------CCCC
Q 009035 439 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV---------FDAA 507 (546)
Q Consensus 439 ~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~--~g~V~iN~~~~---------~~~~ 507 (546)
.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++++|+ +|+||||+.++ ..+.
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~ 471 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQ 471 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCC
Confidence 999999999999999999999999999999999999999999999999999997 99999998642 2467
Q ss_pred CCccCCCCCCCCCc-chHHHHHhhheeeEEE
Q 009035 508 IPFGGYKQSGQGRE-KGSYSLSNYLQVKAVV 537 (546)
Q Consensus 508 ~pfgG~k~SG~g~~-~g~~~l~~~~~~k~v~ 537 (546)
+||||+|.||+|++ +|.+++++|++.|+|.
T Consensus 472 ~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 472 LVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 89999999999999 4799999999999974
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-96 Score=798.90 Aligned_cols=470 Identities=33% Similarity=0.562 Sum_probs=440.7
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (546)
+...++||||+|+.+ +.+++++||. ||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+
T Consensus 16 ~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 91 (500)
T cd07083 16 GRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADLLR 91 (500)
T ss_pred cccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 345578999999974 5679999997 6999999999999999999999999999 8999999999999999999999
Q ss_pred HcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCccc--CCCCCCceeeeeccceeEEEEcCccchHHH
Q 009035 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (546)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (546)
++.++|++++++|+|||+.++.. |+..+++.++||+.++.+..+... +...+...++.++|+|||++|+|||||+.+
T Consensus 92 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 170 (500)
T cd07083 92 RRRRELIATLTYEVGKNWVEAID-DVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAI 170 (500)
T ss_pred hCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHH
Confidence 99999999999999999998764 999999999999999887765432 222345578889999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.+.+..|+.|+++|+|+||||+.+|+.|.
T Consensus 171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~ 250 (500)
T cd07083 171 FTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIY 250 (500)
T ss_pred HHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhcCC------cceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh
Q 009035 300 QLAAKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (546)
Q Consensus 300 ~~aa~~~~------~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~ 373 (546)
+.+++ ++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.+
T Consensus 251 ~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 329 (500)
T cd07083 251 EAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAER 329 (500)
T ss_pred HHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHc
Confidence 99887 54 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEE
Q 009035 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453 (546)
Q Consensus 374 ~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~ 453 (546)
+++|+|.++++++||+++.++++++.++|+++++.| ++++||......|+|++|||+.+++++|++++||+||||++|+
T Consensus 330 ~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~ 408 (500)
T cd07083 330 LSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVI 408 (500)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEE
Confidence 999999999999999999999999999999999887 8999997655568999999999999999999999999999999
Q ss_pred EeC--CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCC--CCCCccCCCCCCCC-CcchHHHHH
Q 009035 454 KYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLS 528 (546)
Q Consensus 454 ~~~--~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~--~~~pfgG~k~SG~g-~~~g~~~l~ 528 (546)
+|+ |++|||+++|+++|||+++|||+|.+++.++++++++|+||||+.+... +.+||||+|.||+| +++|.++++
T Consensus 409 ~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~ 488 (500)
T cd07083 409 RYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLR 488 (500)
T ss_pred EeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHH
Confidence 999 9999999999999999999999999999999999999999999875533 56899999999999 689999999
Q ss_pred hhheeeEEEEe
Q 009035 529 NYLQVKAVVTA 539 (546)
Q Consensus 529 ~~~~~k~v~~~ 539 (546)
+||+.|++++.
T Consensus 489 ~~~~~k~~~~~ 499 (500)
T cd07083 489 RFLEMKAVAER 499 (500)
T ss_pred HhhheeEEEEc
Confidence 99999998764
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-96 Score=793.57 Aligned_cols=469 Identities=32% Similarity=0.463 Sum_probs=437.1
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
...++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~ 91 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH 91 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 445789999999876778999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCc--ccC-----CC-CCCceeeeeccceeEEEEcCccc
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TAP-----AD-GPYHVQTLHEPIGVAGQIIPWNF 215 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~--~~~-----~~-~~~~~~~~~~P~GVv~~i~p~n~ 215 (546)
+++|++++++|+|||+.++.. |+..+++.++|++..+.+..+. ..+ .. .+...+++++|+|||++|+||||
T Consensus 92 ~~el~~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~ 170 (496)
T PLN00412 92 KAPIAECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY 170 (496)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence 999999999999999999874 9999999999999876655322 111 11 12245688999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHH
Q 009035 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (546)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 295 (546)
|+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|..||+|+.|.|||| .+|
T Consensus 171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g 249 (496)
T PLN00412 171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249 (496)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999977789999999999999999999 999
Q ss_pred HHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcc
Q 009035 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (546)
Q Consensus 296 ~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~ 375 (546)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++++++
T Consensus 250 ~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 250 IAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 99998764 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEe
Q 009035 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455 (546)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~ 455 (546)
+|+|.+ ++++||+++.++++++.++|++++++|+++++||+. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 999987 789999999999999999999999999999997753 6899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheee
Q 009035 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534 (546)
Q Consensus 456 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k 534 (546)
+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||++... .+.+||||+|.||+|+++|.+|+++||+.|
T Consensus 403 ~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k 482 (496)
T PLN00412 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVK 482 (496)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceE
Confidence 9999999999999999999999999999999999999999999997643 357999999999999999999999999999
Q ss_pred EEEEeCCCC
Q 009035 535 AVVTALKNP 543 (546)
Q Consensus 535 ~v~~~~~~~ 543 (546)
+++.++..+
T Consensus 483 ~i~~~~~~~ 491 (496)
T PLN00412 483 STVINLPKP 491 (496)
T ss_pred EEEEecCCC
Confidence 998876443
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-96 Score=791.18 Aligned_cols=450 Identities=41% Similarity=0.689 Sum_probs=428.7
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||+++++++.++.+|++++++.|++||+ .|+.+|..+|.++|+++++.|+++.++|++++++|+|||+.++..
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLG 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999999 899999999999999999999999999999999999999999864
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChH
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (546)
|+..+++.++|++.+.+.+.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 -ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~ 157 (456)
T cd07107 79 -DVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence 9999999999999988777766555444455788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 245 t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
++..+++++.++ +|+|++|+++|++.+.++.|+.||++++|+||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~ 235 (456)
T cd07107 158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFP 235 (456)
T ss_pred HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECC
Confidence 999999999995 99999999999877789999999999999999999999999999887 7999999999999999999
Q ss_pred CCCHHHHHHHHHHHH-hccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (546)
Q Consensus 325 dADl~~a~~~i~~~~-f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~ 403 (546)
|||+|.|++.+++++ |.|+||.|++++|||||+++||+|+++|++++.++++|+|.++++++||+++..++++++++|+
T Consensus 236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~ 315 (456)
T cd07107 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYID 315 (456)
T ss_pred CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHH
Confidence 999999999999995 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC
Q 009035 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479 (546)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~ 479 (546)
+++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~ 395 (456)
T cd07107 316 SAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTN 395 (456)
T ss_pred HHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECC
Confidence 99999999999997532 35899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 480 d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|.++++++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 396 DISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999877778899999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-96 Score=789.71 Aligned_cols=457 Identities=50% Similarity=0.852 Sum_probs=433.7
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChh
Q 009035 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (546)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (546)
++++++||.||++|++++.++.+|++++++.|++||+.+.|+.+|.++|.++|++++++|+++.++|++++++|+|||+.
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 46899999999999999999999999999999999984459999999999999999999999999999999999999999
Q ss_pred hhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCC
Q 009035 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (546)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 240 (546)
++...|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~ 161 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE 161 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence 88656999999999999999888766544433344577899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcE
Q 009035 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (546)
Q Consensus 241 ~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~ 320 (546)
.+|+++..+++++.++|+|+|++|+++|++.+.++.|..|++++.|.||||+++|+.|++.++..++||+++|+||+||+
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~ 241 (462)
T cd07112 162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN 241 (462)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence 99999999999999999999999999998888999999999999999999999999999988854789999999999999
Q ss_pred EEecCC-CHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHH
Q 009035 321 IVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (546)
Q Consensus 321 iV~~dA-Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~ 399 (546)
||++|+ |++.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++||+++.++++++.
T Consensus 242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 321 (462)
T cd07112 242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVL 321 (462)
T ss_pred EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 400 KYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||+++||
T Consensus 322 ~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 401 (462)
T cd07112 322 GYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVW 401 (462)
T ss_pred HHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEE
Confidence 999999999999999997532 358999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|+|.+.+.++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 402 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 402 TSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred cCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 999999999999999999999998777788999999999999999999999999999985
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-96 Score=790.72 Aligned_cols=466 Identities=30% Similarity=0.458 Sum_probs=433.2
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (546)
+||||+|+.+ ++++++++||.||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL 77 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4899999875 468899999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHH
Q 009035 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (546)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (546)
++++++|+|||..++.. |+..+++.++|++....+..+.......+...++.++|+|||++|+|||||+...++++++|
T Consensus 78 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 78 ARVIARETGKPLWETRT-EVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999875 99999999999888776665543322223456788999999999999999999999999999
Q ss_pred hhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCC
Q 009035 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (546)
Q Consensus 228 LaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 307 (546)
|++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|+.||++|+|+||||+++|+.|++.++....
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999998 56789999999999999999999999999998776457
Q ss_pred cceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccch-HHHHHHHHHhhhhcccCCC-CCCCCc
Q 009035 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDP-FKGGIQ 385 (546)
Q Consensus 308 ~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~-d~f~~~L~~~~~~~~vG~p-~~~~~~ 385 (546)
+++++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||++++ |+|+++|++.++++++|+| .+++++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 88999999999999999999999999999999999999999999999999985 9999999999999999997 578899
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 465 (546)
+||+++..+++++.++|++++++|+++++||...+..|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++
T Consensus 316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~ 394 (484)
T TIGR03240 316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIA 394 (484)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999988754556899999999 689999999999999999999999999999999
Q ss_pred HcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 466 N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|+++|||+++|||+|.++++++++++++|+||||+... ..+.+||||+|.||+|+++|.++++ |++.|++++++
T Consensus 395 n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 395 NNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 99999999999999999999999999999999998654 3467899999999999999977766 99999999886
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-96 Score=786.14 Aligned_cols=450 Identities=47% Similarity=0.789 Sum_probs=428.7
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhc
Q 009035 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (546)
Q Consensus 86 ~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (546)
+||+||++|++++.++.+|++++++.|++||+.+.|+++|.++|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARG- 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence 5899999999999999999999999999999854699999999999999999999999999999999999999999875
Q ss_pred cchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChH
Q 009035 166 EVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (546)
Q Consensus 166 ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (546)
|+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~ 160 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG 160 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 99999999999999887776654332 23345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 245 t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
++..++++|.++|+|+|++|++++++.++++.|+.|+++|.|.||||+++|+.|.+.++. +++|+++|+|||||+||++
T Consensus 161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~ 239 (454)
T cd07118 161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFA 239 (454)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECC
Confidence 999999999999999999999999877889999999999999999999999999999887 7899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 325 dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
|||++.|++.+++++|+++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++
T Consensus 240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 319 (454)
T cd07118 240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA 319 (454)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEecCCcccC-CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHH
Q 009035 405 GVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483 (546)
Q Consensus 405 a~~~Ga~v~~gg~~~~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~ 483 (546)
++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~ 399 (454)
T cd07118 320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDT 399 (454)
T ss_pred HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHH
Confidence 9999999999997644 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 484 a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+.++++++++|+|+||++...++.+||||+|.||+|+++|++++++||+.|+++
T Consensus 400 ~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 400 ALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999998877888999999999999999999999999999975
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-96 Score=787.29 Aligned_cols=449 Identities=41% Similarity=0.673 Sum_probs=426.8
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhh
Q 009035 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (546)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (546)
++++||.||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS 78 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 46889999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred hhccchHHHHHHHHHHHHhhHhcCcccCCCC-----CCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEe
Q 009035 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADG-----PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (546)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (546)
+. |+..+++.++|++.+++.+.+...+.+. +...+..++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K 157 (456)
T cd07145 79 RV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157 (456)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 86 9999999999999888776665433221 33467889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCc
Q 009035 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (546)
Q Consensus 238 ps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (546)
||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++++|.||||+.+|+.|++.+++ +++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~ 236 (456)
T cd07145 158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGS 236 (456)
T ss_pred CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCC
Confidence 9999999999999999999999999999999888899999999999999999999999999999887 789999999999
Q ss_pred CcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHH
Q 009035 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (546)
Q Consensus 318 ~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (546)
||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..++++
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
+.++|++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 394 (456)
T cd07145 317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF 394 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999753 38999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~~-~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|+|.+.+.++++++++|+||||+.+... +.+||||+|.||+|+++|++||++|++.|+|+
T Consensus 395 t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 395 TNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence 9999999999999999999999876543 57999999999999999999999999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-96 Score=785.46 Aligned_cols=452 Identities=51% Similarity=0.910 Sum_probs=432.8
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||+++++++.++.+|++++++.|++||. .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ 78 (453)
T cd07115 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARR 78 (453)
T ss_pred CCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 369999999999999999999999999999999 899999999999999999999999999999999999999999876
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChH
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (546)
.|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 ~ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~ 158 (453)
T cd07115 79 LDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPL 158 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 69999999999999998887665544444556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 245 t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
++..+.+++.++|+|+|++++++|++.++++.|+.|+++|.|+||||+.+|+.|++.++. ++||+++|+||++|+||++
T Consensus 159 ~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~ 237 (453)
T cd07115 159 SALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFA 237 (453)
T ss_pred HHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECC
Confidence 999999999999999999999999877889999999999999999999999999999887 7899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 325 dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++.++++++.++|++
T Consensus 238 dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (453)
T cd07115 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDV 317 (453)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHH
Q 009035 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484 (546)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a 484 (546)
++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 318 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~ 397 (453)
T cd07115 318 GREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRA 397 (453)
T ss_pred HHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHH
Confidence 99999999999976444689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 485 ~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+++++++++|+|+||+++.+++.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus 398 ~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 398 HRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999999999888888899999999999999999999999999999765
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-96 Score=786.70 Aligned_cols=451 Identities=45% Similarity=0.783 Sum_probs=430.3
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||++|++++.++.+|++++++.|++||. .|+++|..+|.++|+++++.|+++.++|++++++|+|||+.+++.
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV 78 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 899999999999999999999999999999999999999988875
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChH
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (546)
|+..+++.++|++.+++++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~ 157 (457)
T cd07090 79 -DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence 9999999999999998887665544444566789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 245 t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
++..+.+++.++|+|+|++|++++++ +.+..|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECC
Confidence 99999999999999999999999854 588999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 325 dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
|||+|.|++.+++++|.++||.|+++++||||+++||+|+++|+++++++++|+|+++++++||+++.++++++.++|++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEecCCcccC-----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC
Q 009035 405 GVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479 (546)
Q Consensus 405 a~~~Ga~v~~gg~~~~-----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~ 479 (546)
++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~ 395 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR 395 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcC
Confidence 9999999999997532 35899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 480 d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|.+.++++++++++|+||||+.+..++.+||||+|.||+|+++|.+++++||+.|+++..+
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 456 (457)
T cd07090 396 DLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM 456 (457)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEeC
Confidence 9999999999999999999998777788999999999999999999999999999998765
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-96 Score=786.12 Aligned_cols=449 Identities=46% Similarity=0.798 Sum_probs=427.5
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|+++++.|+++.++|++++++|+|||+.++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999875
Q ss_pred ccchHHHHHHHHHHHHhhHhcC---cccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCC
Q 009035 165 TEVPMTTRLFRYYAGWADKIQG---LTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~---~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 240 (546)
|+..+++.++|++..++++.. ...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 157 (456)
T cd07110 79 -DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 999999999999998887643 222222 244578899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcE
Q 009035 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (546)
Q Consensus 241 ~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~ 320 (546)
.+|+++..+++++.++|+|+|++|+|+|.+.+.+..|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+
T Consensus 158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~ 236 (456)
T cd07110 158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236 (456)
T ss_pred cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCee
Confidence 9999999999999999999999999999888889999999999999999999999999999887 789999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHH
Q 009035 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400 (546)
Q Consensus 321 iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~ 400 (546)
||++|||+|.|++.+++++|+++||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++.++++++.+
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEc
Q 009035 401 YIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 478 (546)
Q Consensus 401 ~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t 478 (546)
++++++.+|+++++||.... ..|+|+.|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 396 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVIS 396 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999997643 4689999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 479 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 479 ~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+|.++++++++++++|+||||+.+...+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 397 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 397 RDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999998767788999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=784.00 Aligned_cols=450 Identities=41% Similarity=0.651 Sum_probs=428.4
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 163 (546)
++||+||++|++++.++.+|+++++++|++||+ .|+ ++|..+|.++|++++++|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~ 78 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR 78 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 479999999999999999999999999999999 899 99999999999999999999999999999999999997776
Q ss_pred hccchHHHHHHHHHHHHhhHhcCccc-CCC----CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEec
Q 009035 164 QTEVPMTTRLFRYYAGWADKIQGLTA-PAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (546)
Q Consensus 164 ~~ev~~~~~~l~~~a~~a~~~~~~~~-~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (546)
..|+..+++.++|++..+++..+... +.. .+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 158 (459)
T cd07089 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP 158 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 66999999999999998887655432 221 2456789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcC
Q 009035 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (546)
Q Consensus 239 s~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (546)
|+.+|+++..+.++|.++|+|+|++|+++|++++++..|..||+++.|.||||+.+|+.|++.+++ ++||+++|+||||
T Consensus 159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n 237 (459)
T cd07089 159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKS 237 (459)
T ss_pred CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCC
Confidence 999999999999999999999999999999888889999999999999999999999999999887 7899999999999
Q ss_pred cEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHH
Q 009035 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (546)
Q Consensus 319 p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~ 398 (546)
|+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEE
Q 009035 399 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 476 (546)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v 476 (546)
.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v 397 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGV 397 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEE
Confidence 9999999999999999997543 36899999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 477 FTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 477 ~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
||+|.++++++++++++|+||||+....++.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 398 ~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 398 WSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred EcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 9999999999999999999999998877888999999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-95 Score=792.42 Aligned_cols=467 Identities=36% Similarity=0.547 Sum_probs=436.7
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
...+|.|.| +.++++++++||+||+++++++.++.+|+++++++|++|++ .|+++|.++|.++|+++++.|+++.+
T Consensus 19 ~~~~~~~~~--~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 94 (524)
T PRK09407 19 LRRLTARVD--GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLENRE 94 (524)
T ss_pred HHHHHhhcC--CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHH
Confidence 346787777 44678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC-C--CCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-A--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
+|++++++|+|||+.++.. |+..++..++|++..+++..+.... . ......+..++|+|||++|+|||||+...++
T Consensus 95 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~ 173 (524)
T PRK09407 95 ELLDLVQLETGKARRHAFE-EVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVS 173 (524)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHH
Confidence 9999999999999998875 9999999999999988776543321 1 1124578899999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.| +|.|+||||+++|+.|++.+
T Consensus 174 ~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~a 251 (524)
T PRK09407 174 DAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQA 251 (524)
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888889999876 78999999999999999998
Q ss_pred hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 252 a~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 330 (524)
T PRK09407 252 GR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDY 330 (524)
T ss_pred Hh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 87 78999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC-CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
++++||+++.++++++.+++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+|||
T Consensus 331 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~dea 410 (524)
T PRK09407 331 SADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEA 410 (524)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHH
Confidence 99999999999999999999999999999999997432 35799999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC---CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~---~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
|+++|+++|||+++|||+|.+++.++++++++|+||||+... .++.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 411 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 490 (524)
T PRK09407 411 VERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIAT 490 (524)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEE
Confidence 999999999999999999999999999999999999998654 45678999999999999999999999999999987
Q ss_pred eC
Q 009035 539 AL 540 (546)
Q Consensus 539 ~~ 540 (546)
..
T Consensus 491 ~~ 492 (524)
T PRK09407 491 QR 492 (524)
T ss_pred cc
Confidence 64
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-95 Score=779.81 Aligned_cols=431 Identities=28% Similarity=0.406 Sum_probs=402.1
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHH
Q 009035 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (546)
Q Consensus 100 ~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 179 (546)
....|+++++++|++||. .|++++..+|.++|++++++|++|.|+|+++++.|+|||+.++...|+..+++.++|+++
T Consensus 7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999 899999999999999999999999999999999999999998876799999999999999
Q ss_pred HhhHhcCc----ccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHH
Q 009035 180 WADKIQGL----TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE 255 (546)
Q Consensus 180 ~a~~~~~~----~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~ 255 (546)
.+++..+. ..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~ 164 (484)
T PLN02174 85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ 164 (484)
T ss_pred HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 88766552 21222234568999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHH
Q 009035 256 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335 (546)
Q Consensus 256 aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i 335 (546)
++|+|++|+++|. .+.+..|+. +++|+|+||||+.+|+.|++.+++ +++|+++|||||||+||++|||++.|++.+
T Consensus 165 -~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 165 -YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred -hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 6999999999984 445667776 899999999999999999999987 899999999999999999999999999999
Q ss_pred HHHHh-ccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEec
Q 009035 336 HYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (546)
Q Consensus 336 ~~~~f-~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 414 (546)
++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||+++..+++++.++|+++ ++|+++++
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~ 318 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY 318 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence 99999 69999999999999999999999999999999999999988 89999999999999999999997 78999999
Q ss_pred CCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhcee
Q 009035 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 494 (546)
Q Consensus 415 gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g 494 (546)
||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 319 GG~~-~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG 397 (484)
T PLN02174 319 GGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAG 397 (484)
T ss_pred CCCc-CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcc
Confidence 9975 346899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCC--CCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 495 SVWINCFDVFD--AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 495 ~V~iN~~~~~~--~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+||||++.... +.+||||+|.||+|+++|.+++++||+.|+|+.+
T Consensus 398 ~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 398 GIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred eEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 99999875543 6789999999999999999999999999999875
|
|
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-95 Score=782.03 Aligned_cols=448 Identities=45% Similarity=0.749 Sum_probs=426.0
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 163 (546)
++||+||++|++++.++.+|++++++.|++||+ .|. .+|.++|.++|+++++.|+++.++|++++++|+|||+.+++
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 78 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR 78 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence 479999999999999999999999999999999 776 99999999999999999999999999999999999999987
Q ss_pred hccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCCh
Q 009035 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (546)
Q Consensus 164 ~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (546)
. |+..+++.++|++.+.++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 ~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (454)
T cd07109 79 A-DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP 157 (454)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 5 999999999999998888776555443455678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEe
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~ 323 (546)
+++..+++++.++|+|+|++|+++|.+.+.++.|+.|+++|.|.||||+.+|+.|.+.+++ ++||+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~ 236 (454)
T cd07109 158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEEC
Confidence 9999999999999999999999999778889999999999999999999999999999887 789999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 009035 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (546)
Q Consensus 324 ~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~ 403 (546)
+|||++.|++.+++++|+++||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||+++.++++++.++|+
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~ 315 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 689999999999999999999
Q ss_pred HHHhCCCeEecCCcccC---CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCC
Q 009035 404 SGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480 (546)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~---~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d 480 (546)
+++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d 395 (454)
T cd07109 316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRD 395 (454)
T ss_pred HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCC
Confidence 99999999999987532 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhceeEEEEcCCC-CCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 481 LDTANTLMRALRVGSVWINCFD-VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 481 ~~~a~~~~~~l~~g~V~iN~~~-~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
.+.+.++++++++|+|+||++. ..++.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 396 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 396 GDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999976 45678999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-96 Score=794.09 Aligned_cols=458 Identities=50% Similarity=0.799 Sum_probs=434.5
Q ss_pred eeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHH
Q 009035 74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW 153 (546)
Q Consensus 74 ~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~ 153 (546)
|+++.+ ++++++||.||++|++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 77 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL 77 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence 777755 7799999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred hcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCe
Q 009035 154 DNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233 (546)
Q Consensus 154 e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 233 (546)
|+|||+.+++. |+..+++.++|++.+++++.+...+.+.+...++.++|+|||++|+|||||+...++++++||++||+
T Consensus 78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 156 (462)
T PF00171_consen 78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT 156 (462)
T ss_dssp HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence 99999999987 99999999999999999987766555567789999999999999999999999999999999999999
Q ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEee
Q 009035 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313 (546)
Q Consensus 234 VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~le 313 (546)
||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++..|+.||+++.|.||||+++|+.|.+.+++ +++|+++|
T Consensus 157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~le 235 (462)
T PF00171_consen 157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLE 235 (462)
T ss_dssp EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEE
T ss_pred ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-cccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999886 78999999
Q ss_pred cCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHH
Q 009035 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 393 (546)
Q Consensus 314 lgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~ 393 (546)
+||+||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++.+
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCeEecCC---cccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCC
Q 009035 394 QFEKILKYIRSGVDGGAKLETGG---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 470 (546)
Q Consensus 394 ~~~~~~~~i~~a~~~Ga~v~~gg---~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~ 470 (546)
+++++.++|++++++|+++++|| ......|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 395 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEY 395 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSE
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCC
Confidence 99999999999999999999999 334568999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCC-CCccCCCCCCCCCcchHHHHHhhheeeEE
Q 009035 471 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 536 (546)
Q Consensus 471 gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~-~pfgG~k~SG~g~~~g~~~l~~~~~~k~v 536 (546)
||+++|||+|.+.++++++++++|+||||+++..+.. +||||+|.||+|+++|.+|+++||+.|+|
T Consensus 396 gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 396 GLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp ESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred CceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 9999999999999999999999999999999776655 59999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-95 Score=779.38 Aligned_cols=446 Identities=32% Similarity=0.468 Sum_probs=420.7
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhh
Q 009035 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (546)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~-W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (546)
+++||.||+++++++.++.+|+++++++|++||+ . |+.+|.++|.++|++++++|+++.++|++++++|+|||+.++
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 79 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA 79 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5789999999999999999999999999999998 6 567999999999999999999999999999999999999998
Q ss_pred hhccchHHHHHHHHHHHHhhHhcCcccCCC-----CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEe
Q 009035 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (546)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (546)
.. |+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 80 ~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK 158 (455)
T cd07148 80 KV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158 (455)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence 75 999999999999998887766533321 234568899999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCc
Q 009035 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (546)
Q Consensus 238 ps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (546)
||+.+|+++..+++++.++|+|+|++|+++++ .+.++.|+.||++|.|+||||+++|+.|++.++. .+|+++|+|||
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~--~~~~~lElGG~ 235 (455)
T cd07148 159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP--GTRCALEHGGA 235 (455)
T ss_pred CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc--CCcEEEecCCC
Confidence 99999999999999999999999999999985 4678999999999999999999999999998875 48999999999
Q ss_pred CcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHH
Q 009035 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (546)
Q Consensus 318 ~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (546)
||+||++|||+|.|++.|++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||+++..++++
T Consensus 236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 315 (455)
T cd07148 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDR 315 (455)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
+.++|++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 316 ~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~ 393 (455)
T cd07148 316 VEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVF 393 (455)
T ss_pred HHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999753 47899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~~-~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|+|.+++.++++++++|+||||+++.+. +.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 394 t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 394 TKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 9999999999999999999999876544 46899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-95 Score=781.33 Aligned_cols=448 Identities=41% Similarity=0.668 Sum_probs=428.2
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhh
Q 009035 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (546)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (546)
++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA 78 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 46789999999999999999999999999999999 8999999999999999999999999999999999999999988
Q ss_pred hhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCC
Q 009035 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (546)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 241 (546)
.. |+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 157 (451)
T cd07150 79 WF-ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE 157 (451)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 75 999999999999999888766554433 3456789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEE
Q 009035 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (546)
Q Consensus 242 ~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~i 321 (546)
+|+++..+++++.++|+|+|++|+++|.+.+.+..|..|+++|+|+||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~i 236 (451)
T cd07150 158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236 (451)
T ss_pred CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeE
Confidence 999999999999999999999999999778899999999999999999999999999999887 7899999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 009035 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (546)
Q Consensus 322 V~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~ 401 (546)
|++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++.++++++.++
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 316 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ 316 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCH
Q 009035 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481 (546)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 481 (546)
|++++++|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 99999999999999864 489999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 482 DTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 482 ~~a~~~~~~l~~g~V~iN~~~~~~-~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
++++++++++++|+||||+++... +.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 394 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 394 QRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred HHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 999999999999999999986544 67999999999999999999999999999985
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-95 Score=804.26 Aligned_cols=462 Identities=25% Similarity=0.334 Sum_probs=421.4
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
++||||+|+.+. +++++++||.||+++++++.++ +|+++|+++|++| |+ .|+++|..+|.++|++++++|+++++
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 77 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE 77 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999863 5789999999999999999998 6999999999996 88 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhc--------CcccCCC--CCCceeeeeccc-eeEEEEcCcc
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~--------~~~~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (546)
+|++ +++|+|||+.+++. |+..+++.++||+.++++.. +...+.. .+...++.++|+ |||++|+|||
T Consensus 78 ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 78 ALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred HHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence 9999 59999999999875 99999999999999887632 3333321 123468899998 9999999999
Q ss_pred chHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCch
Q 009035 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (546)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 293 (546)
||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+++|.. +..+..++++|+|+||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 9999999999853 23333347789999999999
Q ss_pred HHHHHHHHHh-hcCCcceEeecCCcCcEEEecCCC-----HHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHH
Q 009035 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (546)
Q Consensus 294 ~g~~i~~~aa-~~~~~pv~lelgG~~p~iV~~dAD-----l~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L 367 (546)
+|+.|++.++ ..+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l 312 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL 312 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence 9999998753 237899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCC-cccccccc
Q 009035 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM-LIAKDEIF 446 (546)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~-~i~~eE~f 446 (546)
+++++++++|+|.++++++||+++.++++++.++|++++++|+++++||... ..|+|++|||+.+++++| .+++||+|
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999999999999999999999999999999999999999999999999753 358999999999998886 79999999
Q ss_pred cceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh--ceeEEEE-cCC-------C-CCCCCCCccCCCC
Q 009035 447 GPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWI-NCF-------D-VFDAAIPFGGYKQ 515 (546)
Q Consensus 447 gPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l--~~g~V~i-N~~-------~-~~~~~~pfgG~k~ 515 (546)
|||++|++|+|.+|||+++|+++|||++||||+|.+.+++++++| ++|+||| |.. . ...+.+||||+|.
T Consensus 392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~ 471 (663)
T TIGR02278 392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR 471 (663)
T ss_pred CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999 8999999 641 1 1235789999999
Q ss_pred CCCCCc-chHHHHHhhheeeEEEE
Q 009035 516 SGQGRE-KGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 516 SG~g~~-~g~~~l~~~~~~k~v~~ 538 (546)
||+|++ +|.+++++|++.|+|..
T Consensus 472 SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 472 AGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CcCCCccchHHHHHHhceeEEEEc
Confidence 999999 57899999999999865
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-95 Score=778.54 Aligned_cols=445 Identities=42% Similarity=0.702 Sum_probs=422.7
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||+++++++.++.+|++++++.|++||+ .|++++..+|.++|++++++|+++.++|++++++|+|||+.++..
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF 78 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 899999999999999999999999999999999999999998876
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChH
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (546)
|+..+++.+++++.... .+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 -ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 155 (446)
T cd07106 79 -EVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL 155 (446)
T ss_pred -HHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999988763 222222223456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 245 t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
++..+++++.++ +|+|++|+++| +.+.+..|..|+++|.|+||||+.+|+.|.+.++. +++|+++|+|||||+||++
T Consensus 156 ~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 156 CTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECC
Confidence 999999999996 99999999998 45688999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 325 dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++.++++++.++|++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHH
Q 009035 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484 (546)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a 484 (546)
++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 392 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999999986555689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 485 ~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+++++++++|+||||+++..++.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 393 ~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 393 EAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 99999999999999998878889999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-95 Score=778.16 Aligned_cols=447 Identities=37% Similarity=0.559 Sum_probs=420.8
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhc
Q 009035 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (546)
Q Consensus 86 ~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (546)
.||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+||++.++..
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~- 77 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFE- 77 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH-
Confidence 38999999999999999999999999999999 899999999999999999999999999999999999999998864
Q ss_pred cchHHHHHHHHHHHHhhHhcCccc-C--CCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCC
Q 009035 166 EVPMTTRLFRYYAGWADKIQGLTA-P--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242 (546)
Q Consensus 166 ev~~~~~~l~~~a~~a~~~~~~~~-~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 242 (546)
|+..+++.++|++..+.+...... + .......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~ 157 (454)
T cd07101 78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 999999999999998877654332 1 1123456889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEE
Q 009035 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (546)
Q Consensus 243 p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV 322 (546)
|+++..+.+++.++|+|+|++|+++|.+.+.++.|+.| ++.|+||||+++|+.|++.+++ +++|+++|+||+||+||
T Consensus 158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV 234 (454)
T cd07101 158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIV 234 (454)
T ss_pred hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEE
Confidence 99999999999999999999999999888899999986 5899999999999999999887 78999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 009035 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (546)
Q Consensus 323 ~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i 402 (546)
++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++.++++++.++|
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCeEecCCccc-CCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCH
Q 009035 403 RSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481 (546)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~-~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 481 (546)
++++++|+++++||... +..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (454)
T cd07101 315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG 394 (454)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 99999999999998643 23579999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeEEEEcCCCC---CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 482 DTANTLMRALRVGSVWINCFDV---FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 482 ~~a~~~~~~l~~g~V~iN~~~~---~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
+++.++++++++|+||||++.. .++.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 395 ~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 395 ARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 9999999999999999998644 45678999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-94 Score=784.60 Aligned_cols=466 Identities=32% Similarity=0.473 Sum_probs=435.7
Q ss_pred CceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
-.||+|+|+. ++++++++||.| |+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 34 ~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 109 (518)
T cd07125 34 IPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANRG 109 (518)
T ss_pred CceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3489999983 578999999999 999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcc-cCCCCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
+|++++++|+|||+.+++. |+..+++.+++++..+++..+.. .+...+...++.++|+|||++|+|||||+...++++
T Consensus 110 ~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i 188 (518)
T cd07125 110 ELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQI 188 (518)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHH
Confidence 9999999999999999875 99999999999999888765442 333335567899999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.|+++|.|+||||+++|+.|++.+++
T Consensus 189 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~ 268 (518)
T cd07125 189 AAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAE 268 (518)
T ss_pred HHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999998875
Q ss_pred c--CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 305 S--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 305 ~--~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
+ .++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|++++.++++|+|.++
T Consensus 269 ~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 348 (518)
T cd07125 269 RDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDL 348 (518)
T ss_pred ccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCC
Confidence 2 37899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC--CHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDE 460 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~--~~~e 460 (546)
++++||+++.++++++.++|+++++ ++++++||......|+|++|||+.++ +|.+++||+||||++|++|+ |+||
T Consensus 349 ~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~de 425 (518)
T cd07125 349 STDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDE 425 (518)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHH
Confidence 9999999999999999999999987 46899988753336999999999888 89999999999999999999 9999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC--CCCCCccCCCCCCCCC-cchHHHHHhhheeeEEE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR-EKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g~-~~g~~~l~~~~~~k~v~ 537 (546)
||+++|+++|||+++|||+|.+.++++++++++|+||||+.+.. .+.+||||+|.||+|+ ++|.+++++||+.|+++
T Consensus 426 Ai~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~ 505 (518)
T cd07125 426 AIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVS 505 (518)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999987653 3578999999999995 78899999999999998
Q ss_pred EeC
Q 009035 538 TAL 540 (546)
Q Consensus 538 ~~~ 540 (546)
+++
T Consensus 506 ~~~ 508 (518)
T cd07125 506 LNT 508 (518)
T ss_pred EEc
Confidence 875
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-95 Score=783.50 Aligned_cols=464 Identities=25% Similarity=0.333 Sum_probs=419.7
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~-~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+ ++.+++++||+||+++++++. +.+|+++|+++|++|+ + .|+++|..+|.++|++++++|++++
T Consensus 5 ~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~~ 80 (521)
T PRK11903 5 LANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQANR 80 (521)
T ss_pred hhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357999999975 357899999999999999997 8899999999999995 7 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC---------CCCceeeeecc-ceeEEEEcCcc
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---------GPYHVQTLHEP-IGVAGQIIPWN 214 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~---------~~~~~~~~~~P-~GVv~~i~p~n 214 (546)
++|++++++|+|||+.+++. |+..+++.++||+.+++.+.+...... .....++.++| +|||++|+|||
T Consensus 81 ~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 159 (521)
T PRK11903 81 DAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFN 159 (521)
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcc
Confidence 99999999999999999886 999999999999999877654322111 12234677899 69999999999
Q ss_pred chHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCch
Q 009035 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (546)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 293 (546)
||+.+.++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|.+.+++..| +++|+|+||||++
T Consensus 160 ~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~ 236 (521)
T PRK11903 160 FPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAE 236 (521)
T ss_pred hHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999998766665544 7899999999999
Q ss_pred HHHHHHHHHh-hcCCcceEeecCCcCcEEEecCCC-----HHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHH
Q 009035 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (546)
Q Consensus 294 ~g~~i~~~aa-~~~~~pv~lelgG~~p~iV~~dAD-----l~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L 367 (546)
+|+.|++.++ ..+++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 237 ~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L 316 (521)
T PRK11903 237 TAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEAL 316 (521)
T ss_pred HHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHH
Confidence 9999999753 337899999999999999999999 5999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc------CCCCceecceeeccCCC--CCc
Q 009035 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKD--DML 439 (546)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptv~~~v~~--~~~ 439 (546)
+++++++++|+|+++++++|||++..+++++.++|+.. .+|+++++||... ...|+|++|||+.++++ +|.
T Consensus 317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~ 395 (521)
T PRK11903 317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATA 395 (521)
T ss_pred HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccch
Confidence 99999999999999999999999999999999999964 5799999999652 13589999999987654 478
Q ss_pred ccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh--ceeEEEEcCCCC---------CCCCC
Q 009035 440 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV---------FDAAI 508 (546)
Q Consensus 440 i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l--~~g~V~iN~~~~---------~~~~~ 508 (546)
+++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++++| ++|+||||+.+. ..+.+
T Consensus 396 i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~ 475 (521)
T PRK11903 396 VHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQS 475 (521)
T ss_pred HHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999 999999997532 34678
Q ss_pred CccCCCCCCCCCcc-hHHHHHhhheeeEEEE
Q 009035 509 PFGGYKQSGQGREK-GSYSLSNYLQVKAVVT 538 (546)
Q Consensus 509 pfgG~k~SG~g~~~-g~~~l~~~~~~k~v~~ 538 (546)
||||+|.||+|+++ |.+++++||+.|++..
T Consensus 476 PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 476 LHGGPGRAGGGEELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence 99999999999995 5899999999887753
|
|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-94 Score=777.59 Aligned_cols=463 Identities=36% Similarity=0.526 Sum_probs=438.6
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM-TAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~-~~~~R~~~L~~~a~~l~~~~~ 145 (546)
++||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++||+ .|+++ +.++|.++|++++++|+++++
T Consensus 3 ~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~~ 79 (473)
T cd07082 3 KYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENKE 79 (473)
T ss_pred CceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999865 68999999999999999999999999999999999999 89988 999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-----CCCceeeeeccceeEEEEcCccchHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (546)
+|++++++|+|||+.++.. |+..+++.++|++...+++.+...+.. .+...+.+++|+|||++|+|||||+...
T Consensus 80 el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 158 (473)
T cd07082 80 EVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLT 158 (473)
T ss_pred HHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHH
Confidence 9999999999999999875 999999999999998887766543322 2445688999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
++++++||++||+||+|||+.+|+++..|.+++.++|+|+|+++++++.+.++++.|..|+++|.|+||||+++|+.|.+
T Consensus 159 ~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 238 (473)
T cd07082 159 VSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK 238 (473)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888999999999999999999999999998
Q ss_pred HHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 301 ~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
.++ ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.
T Consensus 239 ~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~ 315 (473)
T cd07082 239 QHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPW 315 (473)
T ss_pred HhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 865 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
++++++||+++.++++++.+++++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 316 ~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 393 (473)
T cd07082 316 DNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEE 393 (473)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHH
Confidence 999999999999999999999999999999999999753 389999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~-~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
||+++|+++|||+++|||+|.+.+.++++++++|+||||+++... +.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 394 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 394 AIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 999999999999999999999999999999999999999976544 468999999999999999999999999999875
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-94 Score=775.57 Aligned_cols=451 Identities=47% Similarity=0.813 Sum_probs=429.3
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||++|++++.++.+|+++++++|++|++++.|+.+|.++|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 47999999999999999999999999999999744699999999999999999999999999999999999999999876
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCCh
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (546)
|+..+++.+++++.+.+++.+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 -ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p 159 (457)
T cd07114 81 -QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP 159 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence 999999999999998887766544433 345678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEe
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~ 323 (546)
+++..|+++|.++|+|+|++|++++++.+.+..|..|++++.|+||||+++|+.|++.+++ ++||+++|+||+||+||+
T Consensus 160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 238 (457)
T cd07114 160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF 238 (457)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEEC
Confidence 9999999999999999999999999877899999999999999999999999999999887 789999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 009035 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (546)
Q Consensus 324 ~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~ 403 (546)
+|||++.|++.|++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++.++++++.++|+
T Consensus 239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (457)
T cd07114 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA 318 (457)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC
Q 009035 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479 (546)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~ 479 (546)
+++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~ 398 (457)
T cd07114 319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTR 398 (457)
T ss_pred HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECC
Confidence 99999999999997543 35899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 480 d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|.+.++++++++++|+|+||+.+..++.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 399 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 399 DLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999998877888999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-94 Score=776.80 Aligned_cols=446 Identities=39% Similarity=0.630 Sum_probs=424.9
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhh
Q 009035 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (546)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (546)
++++||.||+++++++.++.+|++++++.|++|++ .|+++|..+|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 78 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 36789999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred hhccchHHHHHHHHHHHHhhHhcCcccCCC-----CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEe
Q 009035 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (546)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (546)
+. |+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~K 157 (453)
T cd07094 79 RV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLK 157 (453)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEE
Confidence 75 999999999999998888766544322 244567889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCc
Q 009035 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (546)
Q Consensus 238 ps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (546)
||+.+|+++..+++++.++|+|+|++++++|++.++++.|+.||++|.|+||||+++|+.|.+.+ +++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk 234 (453)
T cd07094 158 PASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCC
Confidence 99999999999999999999999999999998888899999999999999999999999999987 478999999999
Q ss_pred CcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHH
Q 009035 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (546)
Q Consensus 318 ~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (546)
||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..++++
T Consensus 235 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 314 (453)
T cd07094 235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAER 314 (453)
T ss_pred CceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
+.++|++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++|||
T Consensus 315 ~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 391 (453)
T cd07094 315 VERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIF 391 (453)
T ss_pred HHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEE
Confidence 999999999999999999864 58999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|+|.+++.++++++++|+||||+++.. .+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 392 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 392 TRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 999999999999999999999998654 468999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-94 Score=772.43 Aligned_cols=447 Identities=35% Similarity=0.541 Sum_probs=425.5
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhc
Q 009035 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (546)
Q Consensus 86 ~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (546)
+||.||+++++++.++.+|++++++.|++||+ .|++++..+|.++|++++++|+++.++|++++++|+|||..+++.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~- 77 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGG- 77 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHH-
Confidence 58999999999999999999999999999999 999999999999999999999999999999999999999999874
Q ss_pred cchHHHHHHHHHHHHhhHhcCcc-cCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChH
Q 009035 166 EVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (546)
Q Consensus 166 ev~~~~~~l~~~a~~a~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (546)
|+..+++.++|++..+++..+.. .+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 157 (452)
T cd07102 78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 99999999999999887665443 23334556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 245 t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
++..|.++|.++|+|+|++|++++++ +.+..|+.||+|+.|.||||+++|+.|++.++. +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~ 235 (452)
T cd07102 158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP 235 (452)
T ss_pred HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcC
Confidence 99999999999999999999999966 789999999999999999999999999998886 7899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 325 dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
|||+|.|++.+++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.++|++
T Consensus 236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~ 315 (452)
T cd07102 236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD 315 (452)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEecCCccc---CCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCH
Q 009035 405 GVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481 (546)
Q Consensus 405 a~~~Ga~v~~gg~~~---~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 481 (546)
++++|+++++||... +..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 395 (452)
T cd07102 316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDI 395 (452)
T ss_pred HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999753 24689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 482 ~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+++.++++++++|+||||++...++.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 396 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 396 ARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 99999999999999999998777778999999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-94 Score=803.28 Aligned_cols=466 Identities=25% Similarity=0.335 Sum_probs=421.3
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLE 141 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (546)
+.+.++||||+|+.+ ++.+++++||.||+++++++.++ +|+++|+++|++| |+ .|+++|..+|+++|++++++|+
T Consensus 2 ~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l~ 77 (675)
T PRK11563 2 MQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYLL 77 (675)
T ss_pred CccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHHH
Confidence 344578999999986 46789999999999999999987 6999999999998 67 8999999999999999999999
Q ss_pred HcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhc--------CcccCCCC-C-Cceeeeeccc-eeEEEE
Q 009035 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPADG-P-YHVQTLHEPI-GVAGQI 210 (546)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~--------~~~~~~~~-~-~~~~~~~~P~-GVv~~i 210 (546)
++.++|++ +++|+|||+.+++. |+..+++.++||+.++++.. +...+... + ...++.++|+ |||++|
T Consensus 78 ~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I 155 (675)
T PRK11563 78 ERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHI 155 (675)
T ss_pred HhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEE
Confidence 99999998 58999999999886 99999999999999886643 33222211 1 2257888997 999999
Q ss_pred cCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCccEEEec
Q 009035 211 IPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289 (546)
Q Consensus 211 ~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ft 289 (546)
+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+++|++. ..+..++.+++|.||
T Consensus 156 ~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FT 232 (675)
T PRK11563 156 NAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFT 232 (675)
T ss_pred CCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999 99999999998532 334444689999999
Q ss_pred CCchHHHHHHHHHh-hcCCcceEeecCCcCcEEEecCCC-----HHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHH
Q 009035 290 GSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363 (546)
Q Consensus 290 Gs~~~g~~i~~~aa-~~~~~pv~lelgG~~p~iV~~dAD-----l~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f 363 (546)
||+++|+.|++.++ ..+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+|||+++||+|
T Consensus 233 GS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f 312 (675)
T PRK11563 233 GSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAV 312 (675)
T ss_pred CcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHH
Confidence 99999999998632 337999999999999999999995 999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc-------CCCCceecceeeccCCC
Q 009035 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKD 436 (546)
Q Consensus 364 ~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptv~~~v~~ 436 (546)
+++|+++++++++|+|+++++++|||++.++++++.++|++++++ +++++||... ..+|+|++|||+.++++
T Consensus 313 ~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~ 391 (675)
T PRK11563 313 IEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDP 391 (675)
T ss_pred HHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCc
Confidence 999999999999999999999999999999999999999999999 9999999631 13699999999999998
Q ss_pred --CCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhc--eeEEEEcCCCC--------C
Q 009035 437 --DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV--------F 504 (546)
Q Consensus 437 --~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~--~g~V~iN~~~~--------~ 504 (546)
++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++|+ +|+||||+.+. .
T Consensus 392 ~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~ 471 (675)
T PRK11563 392 LEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGS 471 (675)
T ss_pred hhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCC
Confidence 57999999999999999999999999999999999999999999999999999997 99999997531 1
Q ss_pred -CCCCCccCCCCCCCCCc-chHHHHHhhheeeEEEE
Q 009035 505 -DAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 505 -~~~~pfgG~k~SG~g~~-~g~~~l~~~~~~k~v~~ 538 (546)
.+.+||||+|.||+|++ +|.+++++|++.|++..
T Consensus 472 ~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 472 PLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CCcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 25789999999999999 56999999999999865
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-94 Score=774.04 Aligned_cols=451 Identities=32% Similarity=0.485 Sum_probs=422.5
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCC-CEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTG-DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg-e~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+. ++.+++++||.|+ ++|++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|+++
T Consensus 37 ~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~ 112 (500)
T TIGR01238 37 QAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLELH 112 (500)
T ss_pred ecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhH
Confidence 458899999987 5788999999996 89999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.++.. |+..+++.++|++..+++..+ ...++|+|||++|+|||||+...+++
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~~~~ 180 (500)
T TIGR01238 113 MPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIFTGQ 180 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999875 999999999999988765432 13689999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+.+..|+.|+++|.|+||||+.+|+.|++.++
T Consensus 181 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa 260 (500)
T TIGR01238 181 ISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA 260 (500)
T ss_pred HHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999999998
Q ss_pred hcCC---cceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 304 KSNL---KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 304 ~~~~---~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
+ ++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 261 ~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~ 339 (500)
T TIGR01238 261 Q-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH 339 (500)
T ss_pred h-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence 7 44 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCc---ccCCCCceecceeeccCCCCCcccccccccceEEEEEeC-
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE---RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK- 456 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~---~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~- 456 (546)
++++++||+++.++++++.++|+++++.|++++.++. ....+|+|++|||+.+ ++|.+++||+||||++|++|+
T Consensus 340 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~ 417 (500)
T TIGR01238 340 LLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKA 417 (500)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCC
Confidence 9999999999999999999999999999999874432 1224699999999973 688999999999999999998
Q ss_pred -CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhe
Q 009035 457 -DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQ 532 (546)
Q Consensus 457 -~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g~~~l~~~~~ 532 (546)
++||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.... .+.+||||+|.||+| +++|.+++++|++
T Consensus 418 ~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~ 497 (500)
T TIGR01238 418 RELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQ 497 (500)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHh
Confidence 799999999999999999999999999999999999999999986543 245799999999999 8999999999999
Q ss_pred ee
Q 009035 533 VK 534 (546)
Q Consensus 533 ~k 534 (546)
.|
T Consensus 498 ~k 499 (500)
T TIGR01238 498 VQ 499 (500)
T ss_pred hc
Confidence 87
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-94 Score=770.55 Aligned_cols=446 Identities=37% Similarity=0.580 Sum_probs=420.8
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhh
Q 009035 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (546)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (546)
++++||.||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++++++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 46889999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred hhccchHHHHHHHHHHHHhhHhcCcccCCC-----CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEe
Q 009035 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (546)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (546)
+. |+..++..++|++..+.+..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 79 RG-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 86 999999999999988776654432211 234567889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCc
Q 009035 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (546)
Q Consensus 238 ps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (546)
||+.+|+++.+|+++|.++|+|+|++|+++++ .+.+..|+.|+++|.|+||||+.+|+.|.+.++. +|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~ 233 (452)
T cd07147 158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGN 233 (452)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCC
Confidence 99999999999999999999999999999985 4678899999999999999999999999997753 6999999999
Q ss_pred CcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHH
Q 009035 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (546)
Q Consensus 318 ~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (546)
||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|++++.++++|+|.++++++||+++..++++
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 313 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER 313 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
+.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 314 ~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~ 390 (452)
T cd07147 314 VEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVF 390 (452)
T ss_pred HHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 999999999999999999874 48999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
|+|.++++++++++++|+||||+.+.. .+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 391 t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 391 TRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 999999999999999999999987654 4678999999999999999999999999999863
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-93 Score=769.20 Aligned_cols=446 Identities=39% Similarity=0.594 Sum_probs=421.8
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhc
Q 009035 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (546)
Q Consensus 86 ~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (546)
+||.||+++++++.++.+|+++++++|++||+ .|++++.++|.++|+++++.|++++++|++++++|+|||+.++..
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~- 77 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGL- 77 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-
Confidence 48999999999999999999999999999999 899999999999999999999999999999999999999997664
Q ss_pred cchHHHHHHHHHHHHhhHhcCcc-cC-C--CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCC
Q 009035 166 EVPMTTRLFRYYAGWADKIQGLT-AP-A--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (546)
Q Consensus 166 ev~~~~~~l~~~a~~a~~~~~~~-~~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 241 (546)
|+..+++.++|++..+.+..+.. .+ . ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~ 157 (453)
T cd07099 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999999887765432 22 1 13456788999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEE
Q 009035 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (546)
Q Consensus 242 ~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~i 321 (546)
+|+++..|++++.++|+|+|++|+++|++ +.+..|+.| .+|.|+||||+++|+.|.+.+++ +++|+++|+||+||+|
T Consensus 158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i 234 (453)
T cd07099 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234 (453)
T ss_pred chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence 99999999999999999999999999966 678889887 59999999999999999999887 7899999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 009035 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (546)
Q Consensus 322 V~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~ 401 (546)
|++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||+++..+++++.++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~ 314 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH 314 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCH
Q 009035 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481 (546)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 481 (546)
|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (453)
T cd07099 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDL 394 (453)
T ss_pred HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCH
Confidence 99999999999999976434789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 482 DTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 482 ~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
++++++++++++|+||||+... ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 395 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 395 ARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 9999999999999999998754 3578999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-93 Score=767.43 Aligned_cols=448 Identities=43% Similarity=0.711 Sum_probs=425.4
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||++|++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 78 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD 78 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence 479999999999999999999999999999999 899999999999999999999999999999999999999977665
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCCh
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (546)
.|+..+++.+++++..++.+.+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 158 (450)
T cd07092 79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 699999999999998887765543221 1233567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEe
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~ 323 (546)
+++..|.++|.+ |+|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+||+||+||+
T Consensus 159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~ 236 (450)
T cd07092 159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVF 236 (450)
T ss_pred HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEEC
Confidence 999999999999 999999999999777789999999999999999999999999999887 789999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 009035 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (546)
Q Consensus 324 ~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~ 403 (546)
+|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++.++++++.++|+
T Consensus 237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~ 316 (450)
T cd07092 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE 316 (450)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHH
Q 009035 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483 (546)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~ 483 (546)
++. +|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 317 ~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~ 395 (450)
T cd07092 317 RAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGR 395 (450)
T ss_pred HHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 998 9999999998655579999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 484 a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 396 ~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 396 AMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 999999999999999998777888999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-93 Score=767.55 Aligned_cols=448 Identities=45% Similarity=0.738 Sum_probs=424.3
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCCh-hhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF-EQSA 163 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~ 163 (546)
++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||+ .+++
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~ 78 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR 78 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence 479999999999999999999999999999999 9999999999999999999999999999999999999997 5776
Q ss_pred hccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCCh
Q 009035 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (546)
Q Consensus 164 ~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (546)
.|+..+++.++|++.++.++.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 157 (457)
T cd07108 79 -PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 4999999999999998877766654433344567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEe
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~ 323 (546)
+++..+.+++.++ +|+|++|+++|++.+.++.|..|+++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~ 235 (457)
T cd07108 158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF 235 (457)
T ss_pred HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEEC
Confidence 9999999999996 99999999999878889999999999999999999999999999887 789999999999999999
Q ss_pred cCCCHHHHHHHHHHH-HhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 009035 324 EDADVDKAAELAHYA-LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (546)
Q Consensus 324 ~dADl~~a~~~i~~~-~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i 402 (546)
+|||++.|++.++++ .|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|
T Consensus 236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i 315 (457)
T cd07108 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYI 315 (457)
T ss_pred CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999 5999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh-CCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 403 RSGVD-GGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 403 ~~a~~-~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
+++++ +|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 316 ~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vf 395 (457)
T cd07108 316 DLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVW 395 (457)
T ss_pred HHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEE
Confidence 99998 9999999997542 468999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHH-HHhhheeeEEE
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAVV 537 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~-l~~~~~~k~v~ 537 (546)
|+|.++++++++++++|+|+||++...++.+||||+|.||+|+++|.++ +++||+.|+++
T Consensus 396 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 396 TRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred cCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 9999999999999999999999987777889999999999999999976 79999999985
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-93 Score=763.70 Aligned_cols=439 Identities=38% Similarity=0.612 Sum_probs=417.2
Q ss_pred CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHH
Q 009035 91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170 (546)
Q Consensus 91 ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 170 (546)
|++|++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~ 77 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAA 77 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHH
Confidence 689999999999999999999999999 899999999999999999999999999999999999999998875 99999
Q ss_pred HHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHH-HHH
Q 009035 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYV 249 (546)
Q Consensus 171 ~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~-~~l 249 (546)
++.+++++.++++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++ ..+
T Consensus 78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l 157 (443)
T cd07152 78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI 157 (443)
T ss_pred HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence 9999999988776655544433455678899999999999999999999999999999999999999999999996 789
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHH
Q 009035 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 329 (546)
Q Consensus 250 ~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~ 329 (546)
.++|.++|+|+|++|+++| +.+.+..|+.|+++|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHH
Confidence 9999999999999999998 56789999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCC
Q 009035 330 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 409 (546)
Q Consensus 330 ~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~G 409 (546)
.|++.+++++|+|+||.|++++|||||+++||+|+++|++++.++++|+|.++++++||+++..+++++.++|++++++|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHH
Q 009035 410 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 489 (546)
Q Consensus 410 a~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~ 489 (546)
+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++
T Consensus 316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 999999974 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhceeEEEEcCCCCCC-CCCCccCCCCCCCC-CcchHHHHHhhheeeEEE
Q 009035 490 ALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 490 ~l~~g~V~iN~~~~~~-~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~ 537 (546)
++++|+||||+++..+ +.+||||+|.||+| +++|+++|++||+.|+++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 9999999999876654 67999999999999 889999999999999975
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-93 Score=764.72 Aligned_cols=450 Identities=33% Similarity=0.557 Sum_probs=419.9
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhc
Q 009035 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (546)
Q Consensus 86 ~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (546)
+||.||++|++++.++.+|+++++++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+|||+.+++..
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 78 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG 78 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 58999999999999999999999999999999 9999999999999999999999999999999999999999998767
Q ss_pred cchHHHHHHHHHHHHhhHhcCc-ccCCC---CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCC
Q 009035 166 EVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (546)
Q Consensus 166 ev~~~~~~l~~~a~~a~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 241 (546)
|+..+++.++|++..+++.... ..+.. .+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus 79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 158 (465)
T cd07098 79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ 158 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999998877654322 22211 1234678899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCc
Q 009035 242 TPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (546)
Q Consensus 242 ~p~t~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (546)
+|+++..++++ |.++|+|+|++|+++|++ +.+..|+.|++|+.|.||||+.+|+.|.+.+++ +++|+++|+||+
T Consensus 159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~ 236 (465)
T cd07098 159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK 236 (465)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence 99999876655 468999999999999965 789999999999999999999999999999887 789999999999
Q ss_pred CcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHH
Q 009035 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (546)
Q Consensus 318 ~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (546)
||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|++++.++++|+|+++++++||+++.+++++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCce
Q 009035 398 ILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 473 (546)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~ 473 (546)
+.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLs 396 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLG 396 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999986532 35899999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 474 AGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 474 a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++|||+|.+++.++++++++|.||||.+++ ..+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus 397 a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 397 ASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 999999999999999999999999998653 346899999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-92 Score=761.34 Aligned_cols=449 Identities=45% Similarity=0.726 Sum_probs=429.3
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||++|++++.++.+|++++++.|++|++ .|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 78 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG 78 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 899999999999999999999999999999999999999999875
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCCh
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (546)
|+..+++.++|++..+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 157 (451)
T cd07103 79 -EVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP 157 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 999999999999988877766554432 345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEe
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~ 323 (546)
+++..+.++|.++|+|+|++|++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEC
Confidence 9999999999999999999999999777888999999999999999999999999999887 789999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 009035 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (546)
Q Consensus 324 ~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~ 403 (546)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++++
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~ 316 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE 316 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHH
Q 009035 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483 (546)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~ 483 (546)
+++++|+++++||......|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 396 (451)
T cd07103 317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR 396 (451)
T ss_pred HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 99999999999997654478999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 484 a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
++++++++++|+|+||+++..++.+||||+|.||+|+++|++++++||+.|+++
T Consensus 397 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 397 AWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 999999999999999998877788999999999999999999999999999874
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-92 Score=758.02 Aligned_cols=442 Identities=38% Similarity=0.584 Sum_probs=416.5
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhh
Q 009035 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (546)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 163 (546)
+++||+||+++++++.++.+|+++++++|+++ |+.+|..+|.++|+++++.|++++++|++++++|+|||+.++.
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~-----~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 76 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY-----RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR 76 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 57899999999999999999999999999764 7789999999999999999999999999999999999999987
Q ss_pred hccchHHHHHHHHHHHHhhHhcCcccCCC-----CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEec
Q 009035 164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (546)
Q Consensus 164 ~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (546)
. |+..+++.++|++..+.+..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 77 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 155 (451)
T cd07146 77 Y-EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155 (451)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5 999999999999988876655433321 2345678999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcC
Q 009035 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (546)
Q Consensus 239 s~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (546)
|+.+|+++..+.+++.++|+|+|++|+++|++.+++..|+.|+++|.|+||||+.+|+.|.+.++ ++++++|+||||
T Consensus 156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~ 232 (451)
T cd07146 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND 232 (451)
T ss_pred CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence 99999999999999999999999999999987889999999999999999999999999998764 579999999999
Q ss_pred cEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHH
Q 009035 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (546)
Q Consensus 319 p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~ 398 (546)
|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|++++.++++|+|.|+++++||+++..+++++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEc
Q 009035 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 478 (546)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t 478 (546)
.+++++++++|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 389 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999964 589999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCC-CCcchHHHHHhhheeeEEE
Q 009035 479 HNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQ-GREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 479 ~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~-g~~~g~~~l~~~~~~k~v~ 537 (546)
+|.++++++++++++|+||||+.+.. .+.+||||+|.||+ |+++|++|+++||+.|+++
T Consensus 390 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 390 NDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99999999999999999999987554 36799999999995 8999999999999999985
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-93 Score=757.60 Aligned_cols=427 Identities=37% Similarity=0.585 Sum_probs=405.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHh
Q 009035 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (546)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~ 184 (546)
+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||+.+++. |+..+++.++|++..+++.
T Consensus 1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~ 77 (429)
T cd07100 1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAF 77 (429)
T ss_pred CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4789999999999 899999999999999999999999999999999999999999975 9999999999999998876
Q ss_pred cCc-ccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 009035 185 QGL-TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263 (546)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv 263 (546)
... ..+.+ +...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++.++|+|+|++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv 156 (429)
T cd07100 78 LADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF 156 (429)
T ss_pred cCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence 443 23322 4457889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccC
Q 009035 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343 (546)
Q Consensus 264 ~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~ 343 (546)
|+++|++ +.+..|+.|++++.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 9999955 467889999999999999999999999999887 88999999999999999999999999999999999999
Q ss_pred CCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCC
Q 009035 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423 (546)
Q Consensus 344 GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g 423 (546)
||.|++++|||||+++||+|+++|++++.++++|+|+|+++++||+++..+++++.++|++++++|+++++||...+..|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997654468
Q ss_pred ceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC
Q 009035 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 503 (546)
Q Consensus 424 ~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~ 503 (546)
+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+||||++..
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 504 FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 504 ~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
.++.+||||+|.||+|+++|++++++||+.|+++
T Consensus 395 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 395 SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 7788999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-92 Score=760.61 Aligned_cols=450 Identities=46% Similarity=0.826 Sum_probs=428.7
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
++||.||+++++++.++.+|++++++.|++|+. .|+++|.++|.++|++++++|++++++|++++++|+||+..+++.
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ 78 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART 78 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 369999999999999999999999999999999 999999999999999999999999999999999999999988876
Q ss_pred ccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChH
Q 009035 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (546)
Q Consensus 165 ~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (546)
.|+..+++.+++++....+..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~ 158 (455)
T cd07093 79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL 158 (455)
T ss_pred HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence 79999999999999887775554444444556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 245 t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
++..+.++|.++|+|+|++|+++|.+.+.+..|+.|++++.|+||||+.+|+.|.+.+++ +++|+++|+||+||+||++
T Consensus 159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~ 237 (455)
T cd07093 159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237 (455)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECC
Confidence 999999999999999999999999878899999999999999999999999999999987 7899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 325 dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++.++++++.++|++
T Consensus 238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (455)
T cd07093 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVEL 317 (455)
T ss_pred CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCC
Q 009035 405 GVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480 (546)
Q Consensus 405 a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d 480 (546)
++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||+++|||+|
T Consensus 318 a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d 397 (455)
T cd07093 318 ARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRD 397 (455)
T ss_pred HHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999999999997543 358999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 481 ~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
.+.++++++++++|+|+||++...++.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 398 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 398 LGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 999999999999999999998777788999999999999999999999999999985
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-91 Score=754.13 Aligned_cols=446 Identities=43% Similarity=0.672 Sum_probs=421.7
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhh
Q 009035 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (546)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (546)
|+++||.||+++++++.++.+|+++++++|++|+. .|+++|.++|.++|+++++.|+++.++|++++++|+|||..++
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence 46789999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred hhccchHHHHHHHHHHHHhhHhcCcccCCC-----CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEe
Q 009035 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (546)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (546)
.. |+..+++.++|++..+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K 157 (453)
T cd07149 79 RK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157 (453)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 75 999999999999988776655433321 123457889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCc
Q 009035 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (546)
Q Consensus 238 ps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (546)
||+.+|+++..|.+++.++|+|+|++|+++|++.+++..|+.|+++|+|+||||+++|+.|++.++ ++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk 234 (453)
T cd07149 158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCC
Confidence 999999999999999999999999999999977778999999999999999999999999998763 68999999999
Q ss_pred CcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHH
Q 009035 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (546)
Q Consensus 318 ~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (546)
||+||++|+|++.|++.+++++|+++||.|+++++||||++++|+|+++|++++..+++|+|.++++++||+++..++++
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 314 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER 314 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
+.++|++++.+|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~ 391 (453)
T cd07149 315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF 391 (453)
T ss_pred HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 999999999999999999864 47999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|+|.+++.++++++++|+||||+.+.. .+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 392 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 392 TNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 999999999999999999999987654 467899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-90 Score=742.97 Aligned_cols=432 Identities=27% Similarity=0.386 Sum_probs=403.0
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHH
Q 009035 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (546)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (546)
.+..+|+++++++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++|++
T Consensus 2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~ 79 (484)
T PLN02203 2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL 79 (484)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999 89999999999999999999999999999999999999999986569999999999999
Q ss_pred HHhhHhcCcc---cCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH
Q 009035 179 GWADKIQGLT---APA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (546)
Q Consensus 179 ~~a~~~~~~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~ 254 (546)
+..++..+.. .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~ 159 (484)
T PLN02203 80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP 159 (484)
T ss_pred HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 8877664431 121 123457899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec---CCCHHHH
Q 009035 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE---DADVDKA 331 (546)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~---dADl~~a 331 (546)
++ +|+|++|+++| +.+++..|..|+ +|.|+||||+++|+.|++.++. +++|+++|+|||||+||++ |||+|.|
T Consensus 160 ~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 160 KY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred Hh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence 96 99999999998 778999999994 9999999999999999999887 8999999999999999997 6999999
Q ss_pred HHHHHHHHhc-cCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCC
Q 009035 332 AELAHYALFF-NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 410 (546)
Q Consensus 332 ~~~i~~~~f~-~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga 410 (546)
++.+++++|. |+||.|++++|+|||++++|+|+++|++++.++++|+|.++ +++||+++.++++++.++|+++++. +
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~ 313 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A 313 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 9999999996 89999999999999999999999999999999999999986 6899999999999999999999887 7
Q ss_pred eEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHH
Q 009035 411 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 490 (546)
Q Consensus 411 ~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~ 490 (546)
++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++.+++++
T Consensus 314 ~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~ 392 (484)
T PLN02203 314 SIVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSE 392 (484)
T ss_pred eEEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 88888864 34699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 491 LRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 491 l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+++|+||||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|+..
T Consensus 393 l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~ 443 (484)
T PLN02203 393 TSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRR 443 (484)
T ss_pred CCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEc
Confidence 9999999998744 346799999999999999999999999999999876
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-90 Score=732.33 Aligned_cols=406 Identities=35% Similarity=0.608 Sum_probs=385.4
Q ss_pred HHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEc
Q 009035 133 ILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQII 211 (546)
Q Consensus 133 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~ 211 (546)
|++++++|++++++|++++++|+|||+.++.. |+..+++.++|++.+++...+...+.. .+...++.++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 57899999999999999999999999999885 999999999999999887766443322 2345788999999999999
Q ss_pred CccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCC
Q 009035 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 291 (546)
Q Consensus 212 p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs 291 (546)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.|+++|+|+||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred chHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhh
Q 009035 292 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371 (546)
Q Consensus 292 ~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~ 371 (546)
+.+|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 9999999998887 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCC-CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceE
Q 009035 372 MKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 450 (546)
Q Consensus 372 ~~~~vG~p~~~-~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl 450 (546)
+++++|+|.++ ++++|||++.++++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 99999999999999999999999999999999998655578999999999999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 009035 451 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 530 (546)
Q Consensus 451 ~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~ 530 (546)
+|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+||||++....+..||||+|.||+|+++|.+|+++|
T Consensus 319 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f 398 (409)
T PRK10090 319 PVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 398 (409)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877666789999999999999999999999
Q ss_pred heeeEEEEeC
Q 009035 531 LQVKAVVTAL 540 (546)
Q Consensus 531 ~~~k~v~~~~ 540 (546)
|+.|++++.+
T Consensus 399 ~~~k~v~~~~ 408 (409)
T PRK10090 399 LQTQVVYLQS 408 (409)
T ss_pred cceEEEEEec
Confidence 9999997754
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-90 Score=738.82 Aligned_cols=427 Identities=33% Similarity=0.490 Sum_probs=399.7
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhH
Q 009035 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (546)
Q Consensus 104 dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~ 183 (546)
|++++++.|++||+ .|+.+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.++|++....+
T Consensus 1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~ 77 (431)
T cd07095 1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHE 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 899999999999999999999999999999999999999999875 999999999999988777
Q ss_pred hcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 009035 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263 (546)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv 263 (546)
..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~ 157 (431)
T cd07095 78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL 157 (431)
T ss_pred hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence 66544332334567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccC
Q 009035 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343 (546)
Q Consensus 264 ~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~ 343 (546)
|+++| +.+.+..|++|+++|.|+||||+++|+.|++.++.+.++++++|+|||||+||++|||+|.|++.+++++|+|+
T Consensus 158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 236 (431)
T cd07095 158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236 (431)
T ss_pred eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence 99998 45788999999999999999999999999998776467999999999999999999999999999999999999
Q ss_pred CCcccCCCeEEEccc-chHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCC
Q 009035 344 GQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (546)
Q Consensus 344 GQ~C~a~~~v~V~~~-v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (546)
||.|++++|||||++ +||+|+++|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||...+.+
T Consensus 237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~ 316 (431)
T cd07095 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG 316 (431)
T ss_pred CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999765567
Q ss_pred CceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCC
Q 009035 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 502 (546)
Q Consensus 423 g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~ 502 (546)
|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|+||||+.+
T Consensus 317 g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~ 395 (431)
T cd07095 317 TAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPT 395 (431)
T ss_pred CeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999 6899999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred C-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEE
Q 009035 503 V-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536 (546)
Q Consensus 503 ~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v 536 (546)
. ..+.+||||+|.||+|+++|.++++ |++.|++
T Consensus 396 ~~~~~~~PfGG~k~SG~G~~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 396 TGASSTAPFGGVGLSGNHRPSAYYAAD-YCAYPVA 429 (431)
T ss_pred CCCCCCCCCCCcccccCCCCChHHHHH-HHhhhhc
Confidence 4 3456899999999999999999999 5555543
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-90 Score=788.11 Aligned_cols=462 Identities=35% Similarity=0.519 Sum_probs=431.4
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCC-EEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGD-VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge-~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
+.+||| ++.+++++||+|++ +|++++.++.+|+++|+++|++||+ .|+.+|..+|+++|++++++|+++++
T Consensus 554 ~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~~~ 625 (1038)
T PRK11904 554 GPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEANRA 625 (1038)
T ss_pred cceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 456777 45789999999988 9999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcc--cCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
+|+.++++|+|||+.++.. |+..+++.++||+..+++..+.. .+...+..++..++|+|||++|+|||||+.+++++
T Consensus 626 eL~~l~~~E~GK~~~~a~~-EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~ 704 (1038)
T PRK11904 626 ELIALCVREAGKTLQDAIA-EVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQ 704 (1038)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHH
Confidence 9999999999999999875 99999999999999998876542 34445677889999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+++|+++..+++++.++|+|+|++|+++|++.+++..|+.||+|+.|.||||+++|+.|.+.++
T Consensus 705 i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A 784 (1038)
T PRK11904 705 VAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLA 784 (1038)
T ss_pred HHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999888
Q ss_pred hc--CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 304 KS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 304 ~~--~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
.+ .++|+++|+|||||+||++|||+|.|++.+++++|.++||.|+++++||||+++||+|+++|+++++++++|+|.+
T Consensus 785 ~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d 864 (1038)
T PRK11904 785 ARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRL 864 (1038)
T ss_pred hccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCccc
Confidence 63 2689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeC--C
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--D 457 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~--~ 457 (546)
+++++||+++..+++++.++|+++++ |+++++||...+ .+|+|+.|||+.. +++.+++||+||||++|++|+ +
T Consensus 865 ~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ 941 (1038)
T PRK11904 865 LSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASD 941 (1038)
T ss_pred ccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCC
Confidence 99999999999999999999999876 899999997543 3599999999963 677889999999999999997 6
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhheee
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 534 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k 534 (546)
++|+|+++|+++|||+++|||+|.+++.++++++++|+||||+.++. ....||||+|.||+| +.+|+++|++|++.|
T Consensus 942 ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~k 1021 (1038)
T PRK11904 942 LDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEK 1021 (1038)
T ss_pred HHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceE
Confidence 99999999999999999999999999999999999999999987553 345799999999999 689999999999999
Q ss_pred EEEEeC
Q 009035 535 AVVTAL 540 (546)
Q Consensus 535 ~v~~~~ 540 (546)
+|+++.
T Consensus 1022 tv~~~~ 1027 (1038)
T PRK11904 1022 TVTVNT 1027 (1038)
T ss_pred EEEEcc
Confidence 998763
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-90 Score=737.04 Aligned_cols=445 Identities=25% Similarity=0.308 Sum_probs=403.3
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW--PRMTAYER----SKIILRFADLLE 141 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W--~~~~~~~R----~~~L~~~a~~l~ 141 (546)
+||||+|+.+ +++++++||.||+++++++.++.+|+++|+++|++||+ .| +.++..+| .++|.++++.|+
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~ 76 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR 76 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence 4799999874 47899999999999999999999999999999999999 67 66889999 899999999999
Q ss_pred Hc--HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCccc--CC-CCCCceeeeeccceeEEEEcCccch
Q 009035 142 RH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PA-DGPYHVQTLHEPIGVAGQIIPWNFP 216 (546)
Q Consensus 142 ~~--~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~--~~-~~~~~~~~~~~P~GVv~~i~p~n~P 216 (546)
++ .++|++++++|+|||+.+++. |+..+++.++||++..++..+... +. ..+...+++++|+|||++|+|||||
T Consensus 77 ~~~~~~~la~~~~~e~GK~~~~a~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 77 KPEVEDFFARLIQRVAPKSDAQALG-EVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence 98 499999999999999999875 999999999999998877655442 21 1244578999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHH
Q 009035 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (546)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 296 (546)
+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.+ +..|+.|+++++|+||||+++|+
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr 234 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE 234 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999997665 45578899999999999999999
Q ss_pred HHHHHHhhcCCcceEeecCCcCcEEEecCC-CHHHHHHHHHHHHhccCCCcccCCCeEEEcccc-hHHHHHHHHHhhhhc
Q 009035 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKR 374 (546)
Q Consensus 297 ~i~~~aa~~~~~pv~lelgG~~p~iV~~dA-Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v-~d~f~~~L~~~~~~~ 374 (546)
.|...++ +++.+|+||+||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++
T Consensus 235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~ 310 (489)
T cd07126 235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR 310 (489)
T ss_pred HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence 9987765 4689999999999999999 999999999999999999999999999999995 699999999999999
Q ss_pred ccCCCCCCCCccccCCCHHHHHHHHHHHHHHHh-CCCeEecCCcccCC----CC-ceecceeecc------CCCCCcccc
Q 009035 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGA----KG-YYIKPTVFTG------VKDDMLIAK 442 (546)
Q Consensus 375 ~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~----~g-~~~~Ptv~~~------v~~~~~i~~ 442 (546)
++|+ +++||+++.. .+++.++|+++++ +|+++++||...+. .+ .|++|||+.. ++++|++++
T Consensus 311 ~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~ 384 (489)
T cd07126 311 KLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVT 384 (489)
T ss_pred ccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHh
Confidence 9875 4899999998 9999999999997 89999999976432 23 3899999842 578999999
Q ss_pred cccccceEEEEEeCC--HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeE--EEEcCCCCCCCC----CCccCCC
Q 009035 443 DEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS--VWINCFDVFDAA----IPFGGYK 514 (546)
Q Consensus 443 eE~fgPvl~v~~~~~--~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~--V~iN~~~~~~~~----~pfgG~k 514 (546)
||+||||++|++|+| ++|||+++|+++|||++||||+|.++++++++++++|+ |+||+.++..+. .||||+|
T Consensus 385 eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k 464 (489)
T cd07126 385 TEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPR 464 (489)
T ss_pred CCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCc
Confidence 999999999999999 99999999999999999999999999999999999999 669987765544 9999999
Q ss_pred CCCCCCcchHHHHH
Q 009035 515 QSGQGREKGSYSLS 528 (546)
Q Consensus 515 ~SG~g~~~g~~~l~ 528 (546)
.||+|+++...-+-
T Consensus 465 ~sg~g~~~~~~~~~ 478 (489)
T cd07126 465 GAGIGTPEAIRLVW 478 (489)
T ss_pred ccCCCCHhHHHhhh
Confidence 99999987665443
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-90 Score=735.77 Aligned_cols=427 Identities=30% Similarity=0.407 Sum_probs=399.0
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHH
Q 009035 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (546)
Q Consensus 100 ~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 179 (546)
.+.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++||+.
T Consensus 2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 578999999999999999 899999999999999999999999999999999999999998875699999999999999
Q ss_pred HhhHhcCcccCCC-----CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH
Q 009035 180 WADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (546)
Q Consensus 180 ~a~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~ 254 (546)
.++++.....+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~ 159 (436)
T cd07135 80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP 159 (436)
T ss_pred HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence 8876543322211 13456889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHH
Q 009035 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (546)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~ 334 (546)
+ |+|+|++|+++|.+.+.+ .|+.|+ +|.|+||||+.+|+.|++.++. +++|+++|+||+||+||++|||+|.|++.
T Consensus 160 ~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 160 K-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred H-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 9 699999999998766655 588899 9999999999999999998887 78999999999999999999999999999
Q ss_pred HHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEec
Q 009035 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (546)
Q Consensus 335 i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 414 (546)
+++++|.++||.|++++|||||+++||+|+++|+++++++++|+| ++++++||+++.++++++.++|+++ |+++++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~ 311 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI 311 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999986 889999
Q ss_pred CCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhcee
Q 009035 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 494 (546)
Q Consensus 415 gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g 494 (546)
||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|
T Consensus 312 gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g 390 (436)
T cd07135 312 GGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSG 390 (436)
T ss_pred CCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcC
Confidence 99764 37899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 495 SVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 495 ~V~iN~~~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+||||+.+. .++.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus 391 ~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 391 GVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred eEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 999998654 3578999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-89 Score=734.42 Aligned_cols=427 Identities=41% Similarity=0.655 Sum_probs=406.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhH
Q 009035 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (546)
Q Consensus 104 dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~ 183 (546)
|++++++.|++|++ .|+.++..+|.++|+++++.|++++++|++++++|+||++.++.. |+..+++.+++++.+.++
T Consensus 1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (431)
T cd07104 1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRR 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 58899999999999 899999999999999999999999999999999999999998875 999999999999998877
Q ss_pred hcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHH-HHHHHHHHHHcCCCCC
Q 009035 184 IQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPG 261 (546)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t-~~~l~~~l~~aGlP~g 261 (546)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..|.+++.++|+|+|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g 157 (431)
T cd07104 78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG 157 (431)
T ss_pred hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence 665544433 34567899999999999999999999999999999999999999999999998 5789999999999999
Q ss_pred cEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhc
Q 009035 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341 (546)
Q Consensus 262 vv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~ 341 (546)
++|++++++.+++..|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+||+||+||++|||++.|++.|++++|+
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 236 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 9999999888899999999999999999999999999999887 899999999999999999999999999999999999
Q ss_pred cCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC
Q 009035 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (546)
Q Consensus 342 ~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (546)
|+||.|+++++||||++++|+|+++|++++..+++|+|.++++.+||+++..+++++.+++++++++|+++++||..
T Consensus 237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--- 313 (431)
T cd07104 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--- 313 (431)
T ss_pred cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCC
Q 009035 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 501 (546)
Q Consensus 422 ~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~ 501 (546)
.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC-CCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 502 DVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 502 ~~~~-~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+..+ +.+||||+|.||+|+++|++++++||+.|+++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 7654 78999999999999999999999999999985
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-89 Score=730.52 Aligned_cols=420 Identities=30% Similarity=0.458 Sum_probs=391.9
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcC
Q 009035 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (546)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~ 186 (546)
+.+++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.++|++..+++..+
T Consensus 2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (449)
T cd07136 2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK 79 (449)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56889999999 8999999999999999999999999999999999999999998766999999999999998877654
Q ss_pred c-ccCCC---CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 009035 187 L-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (546)
Q Consensus 187 ~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gv 262 (546)
. ..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv 158 (449)
T cd07136 80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY 158 (449)
T ss_pred CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence 3 22211 2345788999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhcc
Q 009035 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (546)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~ 342 (546)
+|+++| +.+.+..|+.|+ ||+|+||||+++|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 999998 556788888775 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred CCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCC
Q 009035 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (546)
Q Consensus 343 ~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (546)
+||.|++++|||||+++||+|+++|+++++++++|+|.+ .+++||+++..+++++.++|+++ ++++||.. +.+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~-~~~ 308 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-DRE 308 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCc-CCC
Confidence 999999999999999999999999999999999999997 89999999999999999999863 89999975 336
Q ss_pred CceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCC
Q 009035 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 502 (546)
Q Consensus 423 g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~ 502 (546)
|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.+
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~ 388 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTI 388 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred C--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 503 V--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 503 ~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
. ..+.+||||+|.||+|+++|.+++++||+.|+|+.+
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 389 MHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred ccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 4 347899999999999999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-89 Score=730.98 Aligned_cols=425 Identities=38% Similarity=0.613 Sum_probs=399.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhH
Q 009035 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (546)
Q Consensus 104 dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~ 183 (546)
|+++++++|++||+ .|++++.++|.++|++++++|+++.++|++++++|+|||+.++.. |+..+++.++|++...++
T Consensus 1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (432)
T cd07105 1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQ 77 (432)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 899999999999999999999999999999999999999877765 999999999999998877
Q ss_pred hcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 009035 184 IQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (546)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gv 262 (546)
..+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv 157 (432)
T cd07105 78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV 157 (432)
T ss_pred hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence 644443322 3445688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCC---chhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHH
Q 009035 263 LNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339 (546)
Q Consensus 263 v~vv~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~ 339 (546)
+|+++|. +.+++..|+.||++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++
T Consensus 158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999974 34578999999999999999999999999999887 8999999999999999999999999999999999
Q ss_pred hccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc
Q 009035 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419 (546)
Q Consensus 340 f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 419 (546)
|+|+||.|+++++||||+++||+|+++|++++.++++| ++++||+++..+++++.++|++++++|+++++||...
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999998 6899999999999999999999999999999999754
Q ss_pred C-CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEE
Q 009035 420 G-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 498 (546)
Q Consensus 420 ~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~i 498 (546)
. ..|+|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|+|||
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~v 391 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHI 391 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence 2 468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 499 NCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 499 N~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|+++.. .+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 392 N~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 392 NGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 997654 478999999999999999999999999999986
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-89 Score=726.46 Aligned_cols=422 Identities=31% Similarity=0.447 Sum_probs=392.6
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcC
Q 009035 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (546)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~ 186 (546)
+++++|++||. .|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++|++....+..+
T Consensus 3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 80 (432)
T cd07137 3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA 80 (432)
T ss_pred HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999 8999999999999999999999999999999999999999888656999999999999988766443
Q ss_pred cc---cCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 009035 187 LT---APA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (546)
Q Consensus 187 ~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gv 262 (546)
.. .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv 159 (432)
T cd07137 81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA 159 (432)
T ss_pred CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 21 111 12234678999999999999999999999999999999999999999999999999999999995 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHh-c
Q 009035 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-F 341 (546)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f-~ 341 (546)
+|+++| +.+.+..|+.| .+++|+||||+.+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++| +
T Consensus 160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 999999 56678889887 69999999999999999999887 78999999999999999999999999999999999 5
Q ss_pred cCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC
Q 009035 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (546)
Q Consensus 342 ~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (546)
|+||.|++++|+|||++++|+|+++|+++++++++|+| ++++++||+++.++++++.++|++++. |+++++||.. +.
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-~~ 313 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-DE 313 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-CC
Confidence 99999999999999999999999999999999999999 569999999999999999999999998 8999999875 34
Q ss_pred CCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCC
Q 009035 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 501 (546)
Q Consensus 422 ~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~ 501 (546)
+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 393 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDT 393 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 502 DV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 502 ~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 394 VVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred cccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 54 3477999999999999999999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-89 Score=734.28 Aligned_cols=431 Identities=29% Similarity=0.440 Sum_probs=400.0
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHH
Q 009035 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (546)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (546)
..+.+|++++++.|++||. .|+.++.++|.++|++++++|++|.++|++++++|+|||..++...|+..+++.++|+.
T Consensus 3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~ 80 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL 80 (493)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999 89999999999999999999999999999999999999999987779999999999998
Q ss_pred HHhhHhcCcc-cCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH
Q 009035 179 GWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (546)
Q Consensus 179 ~~a~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~ 254 (546)
...++..... ... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~ 160 (493)
T PTZ00381 81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT 160 (493)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence 8766543322 111 123457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHH
Q 009035 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (546)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~ 334 (546)
++ +|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.
T Consensus 161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 96 99999999998 677888899887 9999999999999999999887 89999999999999999999999999999
Q ss_pred HHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEec
Q 009035 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (546)
Q Consensus 335 i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 414 (546)
+++++|.|+||.|++++++|||++++|+|+++|++.++++. |++.++++++||+++.++++++.++|+ ++|+++++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~ 312 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence 99999999999999999999999999999999999999985 777788999999999999999999996 46899999
Q ss_pred CCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhcee
Q 009035 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 494 (546)
Q Consensus 415 gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g 494 (546)
||.. +..++|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|
T Consensus 313 gG~~-~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG 391 (493)
T PTZ00381 313 GGEV-DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSG 391 (493)
T ss_pred CCCc-CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 9975 346889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 495 SVWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 495 ~V~iN~~~--~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+|+||+.. ...+.+||||+|.||+|+++|.+|+++||+.|+|+.+.
T Consensus 392 ~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 392 AVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred eEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 99999864 34578999999999999999999999999999998774
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-88 Score=720.94 Aligned_cols=423 Identities=30% Similarity=0.427 Sum_probs=391.5
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCC-hhhhhhccchHHHHHHHHHHHHhhHhc
Q 009035 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP-FEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (546)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~~~ev~~~~~~l~~~a~~a~~~~ 185 (546)
..+++|++||+ .|+++|..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.++|++..+.+..
T Consensus 2 ~~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~ 79 (434)
T cd07133 2 ALLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWM 79 (434)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35788999999 899999999999999999999999999999999999985 567655699999999999998877654
Q ss_pred Cccc-CCC---CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCC
Q 009035 186 GLTA-PAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261 (546)
Q Consensus 186 ~~~~-~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~g 261 (546)
+... ... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++++++ +|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g 158 (434)
T cd07133 80 KPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDED 158 (434)
T ss_pred CCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcC
Confidence 4322 111 2345688999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred cEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhc
Q 009035 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341 (546)
Q Consensus 262 vv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~ 341 (546)
++|+++| +.++++.|..|+ +|.|+||||+.+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|+
T Consensus 159 ~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~ 235 (434)
T cd07133 159 EVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL 235 (434)
T ss_pred eEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhc
Confidence 9999998 557888888765 9999999999999999999887 889999999999999999999999999999999999
Q ss_pred cCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC-
Q 009035 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG- 420 (546)
Q Consensus 342 ~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~- 420 (546)
|+||.|++++|||||++++|+|+++|+++++++++|+ ++++++||+++.++++++.++|++++++|+++++||....
T Consensus 236 ~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 313 (434)
T cd07133 236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED 313 (434)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcC
Confidence 9999999999999999999999999999999999986 4788999999999999999999999999999999987543
Q ss_pred -CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEc
Q 009035 421 -AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 499 (546)
Q Consensus 421 -~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN 499 (546)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||
T Consensus 314 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN 393 (434)
T cd07133 314 FAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN 393 (434)
T ss_pred CCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 500 CFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 500 ~~~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
++.. .++.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 394 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 394 DTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 8753 4478999999999999999999999999999974
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-87 Score=716.02 Aligned_cols=424 Identities=34% Similarity=0.460 Sum_probs=396.1
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcC
Q 009035 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (546)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~ 186 (546)
+++++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||+.+++..|+..+++.+++++....+..+
T Consensus 2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 79 (433)
T cd07134 2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK 79 (433)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57889999999 8999999999999999999999999999999999999999988656999999999999987655433
Q ss_pred cc-cCCC---CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 009035 187 LT-APAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (546)
Q Consensus 187 ~~-~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gv 262 (546)
.. .+.+ .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~ 158 (433)
T cd07134 80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE 158 (433)
T ss_pred CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence 21 2111 2445789999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhcc
Q 009035 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (546)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~ 342 (546)
+++++| +.+.+..|+.|+ ++.|.||||+.+|+.|++.+++ +++|+++|+||+||+||++|||++.|++.+++++|++
T Consensus 159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 999999 557888999997 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred CCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCC-CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC
Q 009035 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (546)
Q Consensus 343 ~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p-~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (546)
+||.|+++++||||++++|+|+++|++++..++.|+| .++++++||+++..+++++.++|++++++|+++++||.. +.
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~-~~ 314 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-DA 314 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc-CC
Confidence 9999999999999999999999999999999988887 889999999999999999999999999999999999975 34
Q ss_pred CCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCC
Q 009035 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 501 (546)
Q Consensus 422 ~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~ 501 (546)
.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.||||++
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 394 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDV 394 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 502 DV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 502 ~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+. ..+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 395 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 395 VLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 54 3478999999999999999999999999999975
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-87 Score=774.88 Aligned_cols=448 Identities=31% Similarity=0.486 Sum_probs=417.4
Q ss_pred ceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
..|+|+. .++.+++++||.| +++|++++.++.+|++.|+++|++||+ .|+.+|..+|+++|++++++|++++++
T Consensus 649 p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~~~e 723 (1318)
T PRK11809 649 PMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQMQT 723 (1318)
T ss_pred CcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 3567732 2467899999998 899999999999999999999999998 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|+.++++|+|||+.++.. ||..+++.+|||+..++... ....++|+|||++|+|||||+.++++++++
T Consensus 724 L~~l~~~EaGKt~~~A~~-EV~eaidflryyA~~a~~~~-----------~~~~~~PlGVV~~IsPWNFPlai~~g~iaa 791 (1318)
T PRK11809 724 LMGLLVREAGKTFSNAIA-EVREAVDFLRYYAGQVRDDF-----------DNDTHRPLGPVVCISPWNFPLAIFTGQVAA 791 (1318)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc-----------CCceeecccEEEEECCCccHHHHHHHHHHH
Confidence 999999999999999875 99999999999998875421 124689999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||++||+++..++++|.++|+|+|++|+++|.+.+++..|+.||+|++|+||||+++|+.|.+.+++ +
T Consensus 792 ALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~-~ 870 (1318)
T PRK11809 792 ALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAG-R 870 (1318)
T ss_pred HHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhh-h
Confidence 999999999999999999999999999999999999999999888999999999999999999999999999999886 3
Q ss_pred C------cceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCC
Q 009035 307 L------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 307 ~------~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
+ +|+++|+||+||+||++|||+|.|++.+++++|.++||.|++++++|||++++|+|++.|+++++++++|+|.
T Consensus 871 l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~ 950 (1318)
T PRK11809 871 LDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPD 950 (1318)
T ss_pred cccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 3 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC---CCCceecceeeccCCCCCcccccccccceEEEEEeC-
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK- 456 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~- 456 (546)
+.++++||+++.++++++.++|++++++|++++.|+.... ..|+|++|||+.. +++.++++|+||||++|++|+
T Consensus 951 ~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~ 1028 (1318)
T PRK11809 951 RLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNR 1028 (1318)
T ss_pred cccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCC
Confidence 9999999999999999999999999999999998875422 4699999999974 668889999999999999996
Q ss_pred -CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCC--CCCCccCCCCCCCC-CcchHHHHHhhhe
Q 009035 457 -DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLSNYLQ 532 (546)
Q Consensus 457 -~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~--~~~pfgG~k~SG~g-~~~g~~~l~~~~~ 532 (546)
+++|+|+++|+++|||+++|||+|.+++.++++++++|+||||+..+.. ..+||||+|.||+| +.+|+++|++|++
T Consensus 1029 ~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~ 1108 (1318)
T PRK11809 1029 NQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLA 1108 (1318)
T ss_pred CCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999865432 45799999999999 5899999999999
Q ss_pred eeE
Q 009035 533 VKA 535 (546)
Q Consensus 533 ~k~ 535 (546)
.+.
T Consensus 1109 ~~~ 1111 (1318)
T PRK11809 1109 TRP 1111 (1318)
T ss_pred cCC
Confidence 873
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=768.91 Aligned_cols=454 Identities=33% Similarity=0.519 Sum_probs=422.3
Q ss_pred CceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
+.+|+|+... +.+++++||.| +++|++++.++.+|+++|++.|++||+ .|+.+|.++|+++|++++++|+++++
T Consensus 556 ~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~~~ 630 (1208)
T PRK11905 556 APLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAHMP 630 (1208)
T ss_pred cceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 3466665442 46789999999 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
+|+.++++|+||++.++.. |+..+++.++||+..+++..+ ...++|+|||++|+|||||+.+++++++
T Consensus 631 eL~~l~~~E~GKt~~ea~~-Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~ 698 (1208)
T PRK11905 631 ELFALAVREAGKTLANAIA-EVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIA 698 (1208)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHH
Confidence 9999999999999999865 999999999999998766532 2457899999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+++|+++..++++|.++|+|+|++|+|+|++.+++..|+.||+|++|+||||+++|+.|.+.++.+
T Consensus 699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~ 778 (1208)
T PRK11905 699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKR 778 (1208)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999998873
Q ss_pred --CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 306 --NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 306 --~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
..+|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|||.+.+
T Consensus 779 ~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~ 858 (1208)
T PRK11905 779 SGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLS 858 (1208)
T ss_pred cCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhcc
Confidence 258999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC-CCCceecceeeccCCCCCcccccccccceEEEEEeC--CHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDE 460 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~--~~~e 460 (546)
+++||+++.++++++.++|+++++.|+.++.|+.... .+|+|+.|||+. + +++.++++|+||||++|++|+ +++|
T Consensus 859 t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dlde 936 (1208)
T PRK11905 859 TDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDR 936 (1208)
T ss_pred CCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHH
Confidence 9999999999999999999999999998887764322 469999999997 3 678899999999999999997 7999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCC--CCCCccCCCCCCCC-CcchHHHHHhhheeeEEE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~--~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~ 537 (546)
+|+++|+++|||+++|||+|.++++++.+++++|+||||+..+.. ...||||+|.||+| +.+|+++|++|++.|+++
T Consensus 937 aI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~ 1016 (1208)
T PRK11905 937 VIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTP 1016 (1208)
T ss_pred HHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceee
Confidence 999999999999999999999999999999999999999876533 45799999999999 599999999999999987
Q ss_pred Ee
Q 009035 538 TA 539 (546)
Q Consensus 538 ~~ 539 (546)
+.
T Consensus 1017 ~~ 1018 (1208)
T PRK11905 1017 IP 1018 (1208)
T ss_pred cc
Confidence 54
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-86 Score=709.19 Aligned_cols=422 Identities=31% Similarity=0.430 Sum_probs=388.8
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcC
Q 009035 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (546)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~ 186 (546)
+|+++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++|++..+++...
T Consensus 2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (443)
T cd07132 2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK 79 (443)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 58899999999 9999999999999999999999999999999999999999998766999999999999988776643
Q ss_pred cccCC----CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 009035 187 LTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (546)
Q Consensus 187 ~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gv 262 (546)
...+. ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv 158 (443)
T cd07132 80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC 158 (443)
T ss_pred CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence 32211 11235788999999999999999999999999999999999999999999999999999999986 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhcc
Q 009035 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (546)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~ 342 (546)
+|++++.+.+ +..|+. ++||.|.||||+++|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.+
T Consensus 159 ~~vv~g~~~~-~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 159 YPVVLGGVEE-TTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred EEEEeCCHHH-HHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 9999995544 556665 589999999999999999998877 7899999999999999999999999999999999999
Q ss_pred CCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCC
Q 009035 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (546)
Q Consensus 343 ~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (546)
+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||+++.++++++.+++++ +++++||.. +..
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~-~~~ 308 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQT-DEK 308 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCcc-CCC
Confidence 9999999999999999999999999999999999988 789999999999999999999974 488899875 346
Q ss_pred CceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCC
Q 009035 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 502 (546)
Q Consensus 423 g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~ 502 (546)
|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|+||||++.
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~ 388 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTI 388 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CC--CCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 503 VF--DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 503 ~~--~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
.. .+.+||||+|.||+|+++|.+|+++|++.|+++.+.+
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 389 MHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred cccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccc
Confidence 43 3679999999999999999999999999999987653
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-85 Score=697.13 Aligned_cols=418 Identities=32% Similarity=0.473 Sum_probs=386.5
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcC
Q 009035 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (546)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~ 186 (546)
+++++|++||+ .|+++|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++|++..+++..+
T Consensus 2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~ 79 (426)
T cd07087 2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK 79 (426)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999 8999999999999999999999999999999999999998877666999999999999988776543
Q ss_pred cc-c--CC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 009035 187 LT-A--PA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (546)
Q Consensus 187 ~~-~--~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gv 262 (546)
.. . +. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.+ |+|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv 158 (426)
T cd07087 80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA 158 (426)
T ss_pred CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence 22 1 11 1234578899999999999999999999999999999999999999999999999999999999 699999
Q ss_pred EEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhcc
Q 009035 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (546)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~ 342 (546)
+|+++|+ .+.+..|+.|+ ++.|+||||+++|+.|.+.++. ++||+++|+|||||+||++|||+|.|++.+++++|.+
T Consensus 159 ~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 159 VAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 9999984 45688999998 9999999999999999998887 7899999999999999999999999999999999999
Q ss_pred CCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCC
Q 009035 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (546)
Q Consensus 343 ~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (546)
+||.|+++++||||++++|+|+++|++++++++.|+| ++.+++||+++.++++++.++++++ ++++||.. +..
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~-~~~ 308 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV-DKE 308 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-CCC
Confidence 9999999999999999999999999999999986666 5789999999999999999999865 78888865 346
Q ss_pred CceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCC
Q 009035 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 502 (546)
Q Consensus 423 g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~ 502 (546)
|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|+||||+++
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 388 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVL 388 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred C--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 503 V--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 503 ~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 389 LHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 3 4478999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-85 Score=654.81 Aligned_cols=453 Identities=42% Similarity=0.788 Sum_probs=429.9
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
+.||+|+|+++++++|++++||.|+.+|++++.++..||++|+.+|+.||+.|.|+++++.+|.+.|.++++++++|.++
T Consensus 423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee 502 (881)
T KOG2452|consen 423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE 502 (881)
T ss_pred hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC----CCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
|+.++++|.|--+..+....+...++.+|||++|.+++.|.++|.. ....+.+.++|+|||++|+|||||+.++.|
T Consensus 503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw 582 (881)
T KOG2452|consen 503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW 582 (881)
T ss_pred hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence 9999999999877777777899999999999999999999998853 234567899999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
+.+.+|++- ...+++ -.|++|+++|+|.-+|+.|..||+|++|-||||+++|+.|++.+
T Consensus 583 k~aaclaa~--------------~~k~~e-------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 583 KTAACLAAQ--------------VLKFAE-------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHHHHH--------------Hhhhhh-------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 999999642 111222 14899999999999999999999999999999999999999999
Q ss_pred hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
+.++.|.|.+|+||++|+||+.|||+++|+.....+.|++.|..|.+..|+||..++.|+|+.++++.++++++|+|+|.
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr 721 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDR 721 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccc
Confidence 99899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC--CHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDE 460 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~--~~~e 460 (546)
+++.||+-..+++.++.+|++.++..||++.|||++....|.|++|||++++.++|.+..||-||||+.|.+|+ |+|+
T Consensus 722 ~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~ 801 (881)
T KOG2452|consen 722 DTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDA 801 (881)
T ss_pred cccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996 5889
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+++++|++++||+++|||+|...+.+++++|.+|+|+||.+.-.+...||||+|.||+|...|..+|.+|.+.|+|++.|
T Consensus 802 vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~ey 881 (881)
T KOG2452|consen 802 VLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFEY 881 (881)
T ss_pred HHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEeeC
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999998754
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-81 Score=673.59 Aligned_cols=415 Identities=23% Similarity=0.340 Sum_probs=376.3
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHh
Q 009035 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (546)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~ 184 (546)
+++|++.|++||+ .|+++|..+|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|++..+++.
T Consensus 1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~ 77 (454)
T cd07129 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREG 77 (454)
T ss_pred ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999 89999999999999999999999999999999999999998877 49999999999999877643
Q ss_pred c--CcccCC-------CCCCceeeeeccceeEEEEcCccchHHH--HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHH
Q 009035 185 Q--GLTAPA-------DGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253 (546)
Q Consensus 185 ~--~~~~~~-------~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l 253 (546)
. +..... ..+...+++++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|+++.++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~ 157 (454)
T cd07129 78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI 157 (454)
T ss_pred CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 2 221110 1123457889999999999999999988 4589999999999999999999999999998876
Q ss_pred H----HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc-CCcceEeecCCcCcEEEecCC--
Q 009035 254 H----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDA-- 326 (546)
Q Consensus 254 ~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~-~~~pv~lelgG~~p~iV~~dA-- 326 (546)
. ++|+|+|++|+|+|++.+.+..|+.|++|++|+||||+.+|+.|++.++++ ++||+++|+|||||+||++|+
T Consensus 158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~ 237 (454)
T cd07129 158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA 237 (454)
T ss_pred HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence 4 889999999999997777999999999999999999999999999988863 589999999999999999999
Q ss_pred -CHHHHHHHHHHHHhccCCCcccCCCeEEEccc-chHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 327 -DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 327 -Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~-v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
|+|.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++| |++++.+.++..++|++
T Consensus 238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEA 307 (454)
T ss_pred HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 9999999999999987754 67777888888999999
Q ss_pred HHhC-CCeEecCCcccCCCCceecceeeccCC---CCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCC
Q 009035 405 GVDG-GAKLETGGERLGAKGYYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480 (546)
Q Consensus 405 a~~~-Ga~v~~gg~~~~~~g~~~~Ptv~~~v~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d 480 (546)
++++ |+++++||... .+|+|++|||+...+ ++|++++||+||||++|++|+|.||+|+++|+++|||+++|||+|
T Consensus 308 a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d 386 (454)
T cd07129 308 LAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEE 386 (454)
T ss_pred HHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccC
Confidence 9998 99999999753 468999999998655 689999999999999999999999999999999999999999999
Q ss_pred --HHHHHHHHHHh--ceeEEEEcCCCCCC---CCCCccC-CCCCCCCCc--chHHHHHhhhee
Q 009035 481 --LDTANTLMRAL--RVGSVWINCFDVFD---AAIPFGG-YKQSGQGRE--KGSYSLSNYLQV 533 (546)
Q Consensus 481 --~~~a~~~~~~l--~~g~V~iN~~~~~~---~~~pfgG-~k~SG~g~~--~g~~~l~~~~~~ 533 (546)
.+++++++++| ++|+||||+++... +.+|||| +|.||+|++ +|.+++++||++
T Consensus 387 ~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 387 DDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred chHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 89999999999 69999999865432 4899999 999999999 799999999997
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=663.74 Aligned_cols=428 Identities=51% Similarity=0.843 Sum_probs=404.8
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhc
Q 009035 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (546)
Q Consensus 106 ~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~ 185 (546)
+++++.|++|++ .|+.++.++|.++|+++++.|.++.++|++++++|+||++.+... |+..+++.+++++..+++..
T Consensus 1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~-ei~~~i~~l~~~~~~~~~~~ 77 (432)
T cd07078 1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALG-EVARAADTFRYYAGLARRLH 77 (432)
T ss_pred CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 368899999999 999999999999999999999999999999999999999887764 99999999999998887765
Q ss_pred Cccc-CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEE
Q 009035 186 GLTA-PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264 (546)
Q Consensus 186 ~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~ 264 (546)
+... +...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~ 157 (432)
T cd07078 78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN 157 (432)
T ss_pred CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence 5432 223456678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCC
Q 009035 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (546)
Q Consensus 265 vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~G 344 (546)
++++++++++..|..|+++|.|.||||..+++.|.+.+++ +++|+++|+||++++||++|+|++.+++.+++++|.++|
T Consensus 158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 9999777788999999999999999999999999999987 789999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC-CC
Q 009035 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KG 423 (546)
Q Consensus 345 Q~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g 423 (546)
|.|+++++||||++++|+|+++|++++.++++|+|+++++++||++++++++++.++|+++.+.|+++++||..... .|
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g 316 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG 316 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999875432 58
Q ss_pred ceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC
Q 009035 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 503 (546)
Q Consensus 424 ~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~ 503 (546)
+|++|||+.+++++++++++|+||||++|++|+|++|||+++|+.++||+++|||+|.+.+++++.++++|+|+||+.+.
T Consensus 317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~ 396 (432)
T cd07078 317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSV 396 (432)
T ss_pred cEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred C-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 504 F-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 504 ~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
. .+.+||||.|.||+|+++|++++++|++.|+++
T Consensus 397 ~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 397 GAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 6 788999999999999999999999999999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-81 Score=666.73 Aligned_cols=414 Identities=24% Similarity=0.271 Sum_probs=375.0
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhc
Q 009035 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (546)
Q Consensus 106 ~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~ 185 (546)
++|+++|++||. .|+++|..+|.++|+++++.|++++++|++++++|+|||+ +.. .|+..+++.++||+..++...
T Consensus 2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~ 77 (442)
T cd07084 2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYR 77 (442)
T ss_pred hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcc
Confidence 679999999999 8999999999999999999999999999999999999999 555 499999999999998876532
Q ss_pred --Cccc---CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCC-C
Q 009035 186 --GLTA---PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL-P 259 (546)
Q Consensus 186 --~~~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGl-P 259 (546)
+... +.......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+ |
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P 157 (442)
T cd07084 78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157 (442)
T ss_pred ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence 2111 111134568899999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCC-CHHHHHHHHHHH
Q 009035 260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYA 338 (546)
Q Consensus 260 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dA-Dl~~a~~~i~~~ 338 (546)
+|++++++|+++ .+..|+.|++++.|+||||+++|+.|++.++. +|+++|+||+||+||++|| |+|.+++.++++
T Consensus 158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 999999999776 88999999999999999999999999998764 7999999999999999999 699999999999
Q ss_pred HhccCCCcccCCCeEEEccc-chHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhC-CCeEecCC
Q 009035 339 LFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG 416 (546)
Q Consensus 339 ~f~~~GQ~C~a~~~v~V~~~-v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg 416 (546)
+|.|+||.|++++|||||++ ++|+|+++|+++++++++| ++.+||+++. ++.++|+++.+. |+++++||
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCC
Confidence 99999999999999999999 9999999999999999998 6889998765 456667777777 59999999
Q ss_pred cccC------CCCceecceeeccCCCCC---cccccccccceEEEEEeCC--HHHHHHHHHcCCCCceEEEEcCCHHHHH
Q 009035 417 ERLG------AKGYYIKPTVFTGVKDDM---LIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTAN 485 (546)
Q Consensus 417 ~~~~------~~g~~~~Ptv~~~v~~~~---~i~~eE~fgPvl~v~~~~~--~~eai~~~N~~~~gL~a~v~t~d~~~a~ 485 (546)
.... ..|+|++|||+.+++++| ++++||+||||++|++|+| ++|+|+++|+++|||+++|||+|.+.++
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 384 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQ 384 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHH
Confidence 7521 258999999999999997 9999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHh-ceeEEEEcCC-C-CCCCCCCccC-CCCCCCCCcc-hHHHHHhhheeeEE
Q 009035 486 TLMRAL-RVGSVWINCF-D-VFDAAIPFGG-YKQSGQGREK-GSYSLSNYLQVKAV 536 (546)
Q Consensus 486 ~~~~~l-~~g~V~iN~~-~-~~~~~~pfgG-~k~SG~g~~~-g~~~l~~~~~~k~v 536 (546)
++++++ ++|+||||++ + ...+..|||| .|.||+|++. |.+++++||+...+
T Consensus 385 ~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 385 ELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 999999 9999999976 3 3445677777 8899999996 99999999998654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-82 Score=616.77 Aligned_cols=458 Identities=31% Similarity=0.528 Sum_probs=426.8
Q ss_pred CCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCC
Q 009035 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (546)
Q Consensus 78 ~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 157 (546)
.+.++++++.|.||+.++.++.-++.|+++.|..|++|++ .|.+.+...|.++|+.+.+.+-+|.|.+++..++|+||
T Consensus 61 ~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGK 138 (583)
T KOG2454|consen 61 QSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGK 138 (583)
T ss_pred CCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCc
Confidence 3457899999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhccchHHHHHHHHHHHHhhHh-cCcccCCC---CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCe
Q 009035 158 PFEQSAQTEVPMTTRLFRYYAGWADKI-QGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233 (546)
Q Consensus 158 ~~~~a~~~ev~~~~~~l~~~a~~a~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 233 (546)
++.++..+||-.+++.+.|.....++- .....|.. .-...++.++|+||++.|.|||||+..++.+++.||.+||+
T Consensus 139 TmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNa 218 (583)
T KOG2454|consen 139 TMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNA 218 (583)
T ss_pred hhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCe
Confidence 999999999999999999887655432 22222211 11235789999999999999999999999999999999999
Q ss_pred EEEecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcc
Q 009035 234 IVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309 (546)
Q Consensus 234 VVlkps~~~p~t~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~p 309 (546)
+|+|-|+.+.++.....++ |+..|-|+++++++++. ++.++.|.+|+.++.+.|.||+.+++.|++.+++ .++|
T Consensus 219 IVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LTP 296 (583)
T KOG2454|consen 219 IVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLTP 296 (583)
T ss_pred EEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcCc
Confidence 9999999999998766655 45559999999999995 5789999999999999999999999999999998 8999
Q ss_pred eEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccC
Q 009035 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389 (546)
Q Consensus 310 v~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl 389 (546)
+++|||||+++||++|+|++..+..++++.|..+||.|...+|++||+++||.|+..|.+++..++.|.|.-..++||+|
T Consensus 297 v~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm 376 (583)
T KOG2454|consen 297 VTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAM 376 (583)
T ss_pred EEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009035 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465 (546)
Q Consensus 390 ~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 465 (546)
++..+++.++.+|++|+++||+++.||.+.+ ..|.|++||++.+++++|+|++||.||||++|+++++.|++|+++
T Consensus 377 ~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lA 456 (583)
T KOG2454|consen 377 CSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLA 456 (583)
T ss_pred hhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhc
Confidence 9999999999999999999999999998643 579999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 466 N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~-~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|+++|||+++||+.|..+.++++.+|++|.|.||++..+. .++||||+|.||+||+.|.+||+..++.|+|...
T Consensus 457 N~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 457 NDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred cCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 9999999999999999999999999999999999987755 6799999999999999999999999999999554
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-80 Score=666.64 Aligned_cols=428 Identities=20% Similarity=0.259 Sum_probs=371.6
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhh
Q 009035 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (546)
Q Consensus 85 v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (546)
=+||+|++++++++.++. ++++++|++||+ .|++++..+|.++|++++++|+++.++|++++++|+|||+.++..
T Consensus 69 e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e 143 (551)
T TIGR02288 69 ERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQ 143 (551)
T ss_pred ccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHh
Confidence 358999999999999985 899999999999 899999999999999999999999999999999999999988742
Q ss_pred -c---cchHHHHHHHHHHHHhhHhcCccc---CCC-CC---CceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCe
Q 009035 165 -T---EVPMTTRLFRYYAGWADKIQGLTA---PAD-GP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233 (546)
Q Consensus 165 -~---ev~~~~~~l~~~a~~a~~~~~~~~---~~~-~~---~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 233 (546)
+ ++...++.++|++....++.+... +.. .+ ...+..++|+|||++|+|||||+++.++++++||++||+
T Consensus 144 ~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~ 223 (551)
T TIGR02288 144 AGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNP 223 (551)
T ss_pred ccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCe
Confidence 1 667889999999988877766533 211 11 122347899999999999999999999999999999999
Q ss_pred EEEecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCc
Q 009035 234 IVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308 (546)
Q Consensus 234 VVlkps~~~p~t~~----~l~~~l~~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~ 308 (546)
||+|||+.+|+++. .+.+++.++|+|+|+||++++. +.++++.|+.||+|++|.||||+++|+.|.+.++. +
T Consensus 224 VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~---~ 300 (551)
T TIGR02288 224 VLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ---A 300 (551)
T ss_pred EEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc---C
Confidence 99999999999765 5679999999999999999985 77899999999999999999999999999988753 7
Q ss_pred ceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEccc---------chHHHHHHHHHhhhhcccCCC
Q 009035 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALAMKRVVGDP 379 (546)
Q Consensus 309 pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~---------v~d~f~~~L~~~~~~~~vG~p 379 (546)
++++|+|||||+||++|+|+|.+++.+++++|.|+||.|++++|+|||++ +||+|+++|++++.++ +|||
T Consensus 301 ~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp 379 (551)
T TIGR02288 301 QVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDP 379 (551)
T ss_pred cEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCc
Confidence 89999999999999999999999999999999999999999999999999 7999999999999999 9999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc---CCCC-ceecceeeccCCCCCcccccccccceEEEEEe
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKG-YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~---~~~g-~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~ 455 (546)
.++.+++||+++.++++++ +++++.| ++++||... ...| +|++|||+....++|++++||+||||++|++|
T Consensus 380 ~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~ 454 (551)
T TIGR02288 380 ARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAV 454 (551)
T ss_pred ccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEE
Confidence 9999999999999999995 5566778 566666432 1135 68899999544459999999999999999999
Q ss_pred CCHHHHHHHHHcC--CCC-ceEEEEcCCHHHHHHHHHHh----------ceeEEEEcCCCCCCCCCCccCCCCCCCCC-c
Q 009035 456 KDLDEVIQRSNAS--QYG-LAAGVFTHNLDTANTLMRAL----------RVGSVWINCFDVFDAAIPFGGYKQSGQGR-E 521 (546)
Q Consensus 456 ~~~~eai~~~N~~--~~g-L~a~v~t~d~~~a~~~~~~l----------~~g~V~iN~~~~~~~~~pfgG~k~SG~g~-~ 521 (546)
+|.||||+++|++ +|| |+++|||+|.++++++.+++ ++|.|+||.. .||++.+.||..- .
T Consensus 455 ~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg~n~~a 528 (551)
T TIGR02288 455 DDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS------AAFSDFHGTGGNPAA 528 (551)
T ss_pred CCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC------CCCCCCCCCCCCCcc
Confidence 9999999999998 566 99999999999999999999 7777777763 4577777777552 3
Q ss_pred chHHHHHhhhe
Q 009035 522 KGSYSLSNYLQ 532 (546)
Q Consensus 522 ~g~~~l~~~~~ 532 (546)
+..+.--.|..
T Consensus 529 ~~~~~~~~~~~ 539 (551)
T TIGR02288 529 NASLSDGAFVA 539 (551)
T ss_pred CCcccchhhhh
Confidence 33344334443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-78 Score=656.09 Aligned_cols=444 Identities=19% Similarity=0.222 Sum_probs=389.8
Q ss_pred CCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcC
Q 009035 77 SASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156 (546)
Q Consensus 77 ~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 156 (546)
+.++++.+++||+|++++++++.+ |+++++++|++|++ .|++++..+|.++|++++++|++++++|++++++|+|
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G 135 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG 135 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence 446788999999999999999887 89999999999999 8999999999999999999999999999999999999
Q ss_pred CChhhhhhc----cchHHHHHHHHHHHHhhHhcCcccC---CC----CCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 157 KPFEQSAQT----EVPMTTRLFRYYAGWADKIQGLTAP---AD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 157 k~~~~a~~~----ev~~~~~~l~~~a~~a~~~~~~~~~---~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
|++.++... |++.+++.++|+..+..++.+.... .. ........++|+||+++|+|||||+++.+.+++
T Consensus 136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~ 215 (549)
T cd07127 136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF 215 (549)
T ss_pred CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence 999877532 6999999999999888776543221 00 111224578999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 226 PALACGNTIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~----~l~~~l~~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
+||++||+||+|||+.+|+++. .+.++|.++|+|+|+||++++. +.++++.|+.||+|++|.||||+.+|+.|.+
T Consensus 216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~ 295 (549)
T cd07127 216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA 295 (549)
T ss_pred HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999864 4668999999999999999985 4678999999999999999999999999999
Q ss_pred HHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEccc---------chHHHHHHHHHhh
Q 009035 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALA 371 (546)
Q Consensus 301 ~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~---------v~d~f~~~L~~~~ 371 (546)
.++. +|+++|+|||||+||++|+|++.+++.+++++|.++||.|++++|||||++ +||+|+++|++++
T Consensus 296 ~a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~ 372 (549)
T cd07127 296 NARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI 372 (549)
T ss_pred Hhcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence 8864 799999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred hhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc---CCCC-ceecceeeccCCCCCccccccccc
Q 009035 372 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKG-YYIKPTVFTGVKDDMLIAKDEIFG 447 (546)
Q Consensus 372 ~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~---~~~g-~~~~Ptv~~~v~~~~~i~~eE~fg 447 (546)
+++ +|||.+..+++||+++.++++++.+ +++.|+ +++||... +..| +|++|||+..++++|++++||+||
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG 446 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG 446 (549)
T ss_pred HHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence 999 9999999999999999999999865 445565 77777643 1234 466999999888999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHcCC--C-CceEEEEcCCHHHHHHHHHHh-cee-EEEEcCCCCCCCC--CCccCCCCCCCC-
Q 009035 448 PVQSILKYKDLDEVIQRSNASQ--Y-GLAAGVFTHNLDTANTLMRAL-RVG-SVWINCFDVFDAA--IPFGGYKQSGQG- 519 (546)
Q Consensus 448 Pvl~v~~~~~~~eai~~~N~~~--~-gL~a~v~t~d~~~a~~~~~~l-~~g-~V~iN~~~~~~~~--~pfgG~k~SG~g- 519 (546)
||++|++|+|.+|+|+++|++. + ||+++|||+|.+.++++.+++ ++| +++||+......+ .||||.+.||..
T Consensus 447 PVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~ 526 (549)
T cd07127 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP 526 (549)
T ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc
Confidence 9999999999999999999984 4 699999999999999999995 555 9999975544444 459999999977
Q ss_pred CcchHHHHHhhheee
Q 009035 520 REKGSYSLSNYLQVK 534 (546)
Q Consensus 520 ~~~g~~~l~~~~~~k 534 (546)
..+..+..-.|...+
T Consensus 527 ~a~~~~~~~~fv~~r 541 (549)
T cd07127 527 AANAALTDGAFVANR 541 (549)
T ss_pred ccccccchhhhhhcc
Confidence 456666666666544
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-80 Score=653.33 Aligned_cols=397 Identities=22% Similarity=0.242 Sum_probs=350.9
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHh
Q 009035 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181 (546)
Q Consensus 102 ~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a 181 (546)
-+|+++|+++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||+.++. ++.++|++...
T Consensus 3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~ 73 (429)
T cd07121 3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT 73 (429)
T ss_pred hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence 3789999999999999 89999999999999999999999999999999999999987653 45566665422
Q ss_pred hHhcCcc-c-C---CCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH--
Q 009035 182 DKIQGLT-A-P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH-- 254 (546)
Q Consensus 182 ~~~~~~~-~-~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~-- 254 (546)
.+.. . + ...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..++++++
T Consensus 74 ---~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~ 150 (429)
T cd07121 74 ---PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKA 150 (429)
T ss_pred ---CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHH
Confidence 1111 1 1 1122345788999999999999999999999999999999999999999999999999998874
Q ss_pred --HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHH
Q 009035 255 --EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332 (546)
Q Consensus 255 --~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~ 332 (546)
++|+|+|++|++++.+.+.++.|++||+||+|+||||+.+|+.|++. .||+++|+|||||+||++|||+|.|+
T Consensus 151 ~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa 225 (429)
T cd07121 151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAA 225 (429)
T ss_pred HHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHH
Confidence 78999999999998777889999999999999999999999999874 48999999999999999999999999
Q ss_pred HHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhC--CC
Q 009035 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG--GA 410 (546)
Q Consensus 333 ~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~--Ga 410 (546)
+.|++++|+|+||.|++++|||||+++||+|+++|++. . .++++.++++++.++|+++.+. |+
T Consensus 226 ~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga 290 (429)
T cd07121 226 RDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPN 290 (429)
T ss_pred HHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCcccc
Confidence 99999999999999999999999999999999999885 1 1478999999999999999864 79
Q ss_pred eEecCCccc---CCCCceec---ceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCc--eEEEEcCCHH
Q 009035 411 KLETGGERL---GAKGYYIK---PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLD 482 (546)
Q Consensus 411 ~v~~gg~~~---~~~g~~~~---Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL--~a~v~t~d~~ 482 (546)
++++||... +..|+|++ |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+
T Consensus 291 ~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~ 370 (429)
T cd07121 291 KKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVE 370 (429)
T ss_pred ccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHH
Confidence 999988641 22578877 499999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCC--CCcchHHHHHhhheeeEE
Q 009035 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ--GREKGSYSLSNYLQVKAV 536 (546)
Q Consensus 483 ~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~--g~~~g~~~l~~~~~~k~v 536 (546)
+++++++++++|+||||+++. +.+||||+|.|++ |...| +|+ +.+|++
T Consensus 371 ~a~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~ 420 (429)
T cd07121 371 NLTKMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTF 420 (429)
T ss_pred HHHHHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcC-cCc---cChhhh
Confidence 999999999999999998654 6799999999998 65555 554 444444
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-78 Score=639.26 Aligned_cols=408 Identities=18% Similarity=0.217 Sum_probs=348.6
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHH--HHHHHHHHhh
Q 009035 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR--LFRYYAGWAD 182 (546)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~--~l~~~a~~a~ 182 (546)
+++|+++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+|||+.+++. ++..... ..++++.
T Consensus 1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~--- 74 (439)
T cd07081 1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD--- 74 (439)
T ss_pred CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---
Confidence 4789999999999 899999999999999999999999999999999999999988864 4544433 2333332
Q ss_pred HhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH----HcCC
Q 009035 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGL 258 (546)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~----~aGl 258 (546)
...+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 222222233223456889999999999999999999999999999999999999999999999998888875 7799
Q ss_pred CCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHH
Q 009035 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 338 (546)
Q Consensus 259 P~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~ 338 (546)
|+|++|+|++.+.+.++.|+.||+|++|+||||++ +++.+++ ++||+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999987778999999999999999999987 4555555 789999999999999999999999999999999
Q ss_pred HhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCc-
Q 009035 339 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE- 417 (546)
Q Consensus 339 ~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~- 417 (546)
+|+|+||.|++.+|+|||+++||+|+++|.++. ||+++.++++++.++|+++.+.|++++.|+.
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~ 294 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY 294 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence 999999999999999999999999999998853 8999999999999999999999998754432
Q ss_pred c-cCCCCceecce---eeccCC--CCCcccccccccceEEEEEeCCHHHHHHHHHcC----CCCceEEEEcCC---HHHH
Q 009035 418 R-LGAKGYYIKPT---VFTGVK--DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHN---LDTA 484 (546)
Q Consensus 418 ~-~~~~g~~~~Pt---v~~~v~--~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~----~~gL~a~v~t~d---~~~a 484 (546)
. ....|+|++|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+++
T Consensus 295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a 374 (439)
T cd07081 295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENM 374 (439)
T ss_pred HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHH
Confidence 1 11358999998 998888 999999999999999999999999999999965 799999999999 9999
Q ss_pred HHHHHHhceeEEEEcCCCCCC---CCCCccCCCCCCCC--C---cchH--HHHHhhheeeEEEE
Q 009035 485 NTLMRALRVGSVWINCFDVFD---AAIPFGGYKQSGQG--R---EKGS--YSLSNYLQVKAVVT 538 (546)
Q Consensus 485 ~~~~~~l~~g~V~iN~~~~~~---~~~pfgG~k~SG~g--~---~~g~--~~l~~~~~~k~v~~ 538 (546)
+++++++++|+||||..+.+. -.--|||++.+-+| . .+.. -+.++|++.|.|..
T Consensus 375 ~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 375 NQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999999999765222 22356676655322 2 2222 24778888887754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-77 Score=640.64 Aligned_cols=407 Identities=21% Similarity=0.212 Sum_probs=353.3
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHH
Q 009035 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (546)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (546)
....+|++++++.|++||. .|+.++.++|.++|+++++.|+++.++|++++++|+||++.+++. ..++++.
T Consensus 32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~ 102 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA 102 (465)
T ss_pred ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence 3457899999999999999 899999999999999999999999999999999999999887652 3345555
Q ss_pred HHhhH---hcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH-
Q 009035 179 GWADK---IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (546)
Q Consensus 179 ~~a~~---~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~- 254 (546)
..... ....... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 103 ~~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 103 EKTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred HHhccccccccCccc-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 44321 1111111 122346788899999999999999999999999999999999999999999999999998876
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHH
Q 009035 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (546)
Q Consensus 255 ---~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a 331 (546)
++|+|+|++|++++.+.+.++.|++||+||+|+||||+++|+.|++ ..+|+++|+|||||+||++|||+|.|
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence 6899999999999877788999999999999999999999999987 25899999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCe
Q 009035 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (546)
Q Consensus 332 ~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~ 411 (546)
++.|++++|+|+||.|++++|||||+++||+|+++|+++. +|+++..+++++.++++++.+++++
T Consensus 257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~ 321 (465)
T PRK15398 257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNK 321 (465)
T ss_pred HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccch
Confidence 9999999999999999999999999999999999998851 2799999999999999965545667
Q ss_pred EecCCcc---cCCCCcee---cceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCc--eEEEEcCCHHH
Q 009035 412 LETGGER---LGAKGYYI---KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDT 483 (546)
Q Consensus 412 v~~gg~~---~~~~g~~~---~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL--~a~v~t~d~~~ 483 (546)
++.||.. .+..|+|+ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++
T Consensus 322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~ 401 (465)
T PRK15398 322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDN 401 (465)
T ss_pred hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHH
Confidence 7777643 12246666 4799999999999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 484 a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++++++++++|+||||+++. +.+||||+|.|.+.. +|+.| ...|..|+++.+
T Consensus 402 a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 402 LNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHHHHhCCceEEEECCCCc--cccCcCCCCCceeee-cccCC-CCccchhhhhhh
Confidence 99999999999999998643 679999999998522 26666 666666665543
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-77 Score=588.84 Aligned_cols=423 Identities=28% Similarity=0.420 Sum_probs=384.1
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHh
Q 009035 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (546)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~ 184 (546)
+++.++.+|.+|.+| +.-|.+.|.+.|+++...+++|.+++.+++..|.+|+..++...|+...++.++|+....++.
T Consensus 4 ~~~~v~~~R~~F~sG--rtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w 81 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSG--RTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW 81 (477)
T ss_pred HHHHHHHHHHHHhcC--CcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 445588999999954 899999999999999999999999999999999999999998889999999999887655433
Q ss_pred c-CcccC---CCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCC
Q 009035 185 Q-GLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260 (546)
Q Consensus 185 ~-~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~ 260 (546)
. ....+ ..-....+++.+|+|||++|+|||||+.+.+.++++||+|||+||+|||+.+|.++..|++++-+. +++
T Consensus 82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~ 160 (477)
T KOG2456|consen 82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ 160 (477)
T ss_pred ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence 2 22222 122346789999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHh
Q 009035 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340 (546)
Q Consensus 261 gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f 340 (546)
+.+.||.|.-++.+ .|+.| +.|.|.||||+.+|+.|+.++++ +++||+||||||||++|++|+|++-+++.|+|+++
T Consensus 161 ~~~~VV~Ggv~ETt-~LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 161 DLIRVVNGGVPETT-ELLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred ceEEEecCCCchHH-HHHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 99999999555554 55555 89999999999999999999998 99999999999999999999999999999999999
Q ss_pred ccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC
Q 009035 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (546)
Q Consensus 341 ~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 420 (546)
.|+||.|.++++|+++.+++++++++++..++++ .|...+++.+++-+++..+++|+...+++- .+++.||.. +
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~-d 311 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES-D 311 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc-c
Confidence 9999999999999999999999999999988775 688888999999999999999999998742 578889985 4
Q ss_pred CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcC
Q 009035 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 500 (546)
Q Consensus 421 ~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~ 500 (546)
....|++|||+.+|++++++|+||+||||++|+.+++++|+|+.+|+.+-.|++|+||+|.+...|+.+++.+|.|.+|+
T Consensus 312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND 391 (477)
T KOG2456|consen 312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVND 391 (477)
T ss_pred hhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecc
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C--CCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 501 F--DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 501 ~--~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
. +..-..+||||++.||+|++||++|++.|++.|++..+
T Consensus 392 ~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 392 VIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred eEEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 5 33446899999999999999999999999999998654
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-76 Score=626.56 Aligned_cols=388 Identities=21% Similarity=0.254 Sum_probs=341.6
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChh----hhhh-------ccchHH
Q 009035 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (546)
Q Consensus 102 ~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~ 170 (546)
.+|+++++++|++||+ .|+++|..+|.++|+++++.|++|.++|++++++|+||+.. ++.. .|+..+
T Consensus 3 ~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~ 80 (417)
T PRK00197 3 MEYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI 80 (417)
T ss_pred hhHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHH
Confidence 3689999999999999 89999999999999999999999999999999988777642 3321 378889
Q ss_pred HHHHHHHHHHhhHhcCcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHH
Q 009035 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (546)
Q Consensus 171 ~~~l~~~a~~a~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~ 247 (546)
++.++|++.+++.. +...+. +.+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~ 157 (417)
T PRK00197 81 AEGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNR 157 (417)
T ss_pred HHHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHH
Confidence 99999999887643 333322 22335788999999999999985 4 778899999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCc-hhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEE
Q 009035 248 YVSKLL----HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (546)
Q Consensus 248 ~l~~~l----~~aGlP~gvv~vv~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV 322 (546)
++++++ .++|+|+|++|++++.+ ++.++.|..|+++|+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 158 ~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV 233 (417)
T PRK00197 158 ALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYV 233 (417)
T ss_pred HHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEE
Confidence 998875 68999999999999644 55788899999999999999999999998753 5899999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 009035 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (546)
Q Consensus 323 ~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i 402 (546)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++++++
T Consensus 234 ~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 287 (417)
T PRK00197 234 DESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE------------------------- 287 (417)
T ss_pred eCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999876532
Q ss_pred HHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHH
Q 009035 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482 (546)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~ 482 (546)
++ |+... .+ |+ |||+ +++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 288 ---------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~ 350 (417)
T PRK00197 288 ---------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYA 350 (417)
T ss_pred ---------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHH
Confidence 12 11110 12 33 9998 578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhheeeEEEEeCC
Q 009035 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 483 ~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g----~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
+++++++++++|+||||+++...+..||||.|.||+| +++|.+++++||+.|++++.+.
T Consensus 351 ~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~ 413 (417)
T PRK00197 351 AAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDG 413 (417)
T ss_pred HHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECCC
Confidence 9999999999999999998776778899999999999 9999999999999999987543
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-76 Score=625.11 Aligned_cols=381 Identities=20% Similarity=0.247 Sum_probs=336.1
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChh----hhh-------hccchHHHHHHH
Q 009035 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSA-------QTEVPMTTRLFR 175 (546)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~-------~~ev~~~~~~l~ 175 (546)
..+++|++||. .|+++|.++|.++|+++++.|++++++|+++++.|+||+.. ++. ..|+..+++.++
T Consensus 2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~ 79 (406)
T cd07079 2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR 79 (406)
T ss_pred hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence 56888999999 89999999999999999999999999999999777666643 222 138899999999
Q ss_pred HHHHHhhHhcCcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHH
Q 009035 176 YYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL 252 (546)
Q Consensus 176 ~~a~~a~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~ 252 (546)
+++...+. .+...+. +.+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..++++
T Consensus 80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~ 156 (406)
T cd07079 80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI 156 (406)
T ss_pred HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence 99876543 2333221 2233567899999999999996 56 67889999999999999999999999999999998
Q ss_pred HH----HcCCCCCcEEEEeCCch-hHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCC
Q 009035 253 LH----EAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 327 (546)
Q Consensus 253 l~----~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dAD 327 (546)
+. ++|+|+|++|++++.+. +.++.|..||++|+|+||||+++|+.|++.+ ++|+++|||||||+||++|||
T Consensus 157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD 232 (406)
T cd07079 157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence 87 89999999999998544 6788899999999999999999999998765 589999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHh
Q 009035 328 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 407 (546)
Q Consensus 328 l~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~ 407 (546)
+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~---------------------------------- 277 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE---------------------------------- 277 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------
Confidence 99999999999999999 9999999999999999999999997764
Q ss_pred CCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHH
Q 009035 408 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 487 (546)
Q Consensus 408 ~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~ 487 (546)
.|++++.|+.. ..|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 278 ~ga~~~~g~~~----~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~ 349 (406)
T cd07079 278 AGVELRGDEET----LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERF 349 (406)
T ss_pred CCCEEecCHHH----HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHH
Confidence 25665533321 1478888 689999999999999999999999999999999999999999999999999999
Q ss_pred HHHhceeEEEEcCCCCCCCCCCccCCCCCCC----CCcchHHHHHhhheeeEEEEe
Q 009035 488 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQ----GREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 488 ~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~----g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++++++|+||||+++...+..||||.|.||+ |+++|.+++++||+.|+++..
T Consensus 350 ~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~ 405 (406)
T cd07079 350 LREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG 405 (406)
T ss_pred HHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence 9999999999999877667789999999998 999999999999999998753
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-75 Score=651.07 Aligned_cols=381 Identities=20% Similarity=0.240 Sum_probs=342.8
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHH------HHhcC--CChhhhh---hccchHHH
Q 009035 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE------TWDNG--KPFEQSA---QTEVPMTT 171 (546)
Q Consensus 103 ~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a~---~~ev~~~~ 171 (546)
+++++++++|++||+ .|+++|..+|.++|++++++|+++.++|++++ ++|+| ||+.++. ..|+..++
T Consensus 294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~ 371 (718)
T PLN02418 294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA 371 (718)
T ss_pred HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence 469999999999999 89999999999999999999999999999996 77999 8887764 34999999
Q ss_pred HHHHHHHHHhhHhcCcccC---CCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHH
Q 009035 172 RLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248 (546)
Q Consensus 172 ~~l~~~a~~a~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~ 248 (546)
+.++||+.+ .+..+...+ ...+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.||+++..
T Consensus 372 ~~~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~ 448 (718)
T PLN02418 372 ASIRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI 448 (718)
T ss_pred HHHHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence 999999988 344444433 222334678999999999999999 99999 999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCc----EEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 249 VSKLLHEAGLPPGV----LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 249 l~~~l~~aGlP~gv----v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
|++++.++ +|+|+ +|+++| +.++++.|..||+|++|+||||+..+ .+.++. ++||+++|+|||+|+||++
T Consensus 449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~i---~~~aa~-~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKLV---SQIKAS-TKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHHH---HHHHHh-cCCCEEEeCCCcceEEEeC
Confidence 99999999 99996 999998 66889999999999999999999644 444554 6899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 325 dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
|||+|.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence 999999999999999999 9999999999999999997 2 35889999
Q ss_pred HHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHH
Q 009035 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484 (546)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a 484 (546)
++++|+++ +||.+.. | ++. + ++|++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.+++
T Consensus 569 a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a 637 (718)
T PLN02418 569 LRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVA 637 (718)
T ss_pred HHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHH
Confidence 99999999 6886432 4 233 3 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCC--CCcc--hHHHHHhhheeeEEEEe
Q 009035 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ--GREK--GSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 485 ~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~--g~~~--g~~~l~~~~~~k~v~~~ 539 (546)
.++++++++|+||||+++.+.+..||||+|.||+ ||++ |++||++||+.|+|+..
T Consensus 638 ~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 638 EIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred HHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 9999999999999999877677889999999999 9875 99999999999999765
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-75 Score=617.28 Aligned_cols=409 Identities=19% Similarity=0.267 Sum_probs=352.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHH-HHHHHHHHhhH
Q 009035 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR-LFRYYAGWADK 183 (546)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~-~l~~~a~~a~~ 183 (546)
+++|+++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||+.+++..|+..+++ .++|++.. +
T Consensus 1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~ 76 (436)
T cd07122 1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K 76 (436)
T ss_pred ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence 4789999999999 89999999999999999999999999999999999999999887557777787 78888853 2
Q ss_pred hcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH----HcCCC
Q 009035 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLP 259 (546)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~----~aGlP 259 (546)
..+.. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|
T Consensus 77 ~~g~~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P 155 (436)
T cd07122 77 TVGVI-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP 155 (436)
T ss_pred ceeee-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence 32222 11223456889999999999999999999999999999999999999999999999999888765 78999
Q ss_pred CCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHH
Q 009035 260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339 (546)
Q Consensus 260 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~ 339 (546)
+|++|+++|.+.+.+..|++||+||+|+||||+++++ .++. +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus 156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~ 230 (436)
T cd07122 156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK 230 (436)
T ss_pred chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence 9999999997788899999999999999999999764 3344 6899999999999999999999999999999999
Q ss_pred hccCCCcccCCCeEEEcccchHHHHHHHHHhhhhc-------ccCCC-CCCCCccccCCCHHHHHHHHHHHHHHHhCCCe
Q 009035 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR-------VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (546)
Q Consensus 340 f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~-------~vG~p-~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~ 411 (546)
|+|+||.|++++|||||+++||+|+++|+++...+ ++|++ .++++.+||+++..+.+++.+++..++..|++
T Consensus 231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~ 310 (436)
T cd07122 231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTK 310 (436)
T ss_pred hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCe
Confidence 99999999999999999999999999999998877 89998 46788999999999998888888777777777
Q ss_pred EecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC----CCCceEEEEcCCHHHHHHH
Q 009035 412 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHNLDTANTL 487 (546)
Q Consensus 412 v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~----~~gL~a~v~t~d~~~a~~~ 487 (546)
++.++ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||+++|||+|.++++++
T Consensus 311 vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~ 375 (436)
T cd07122 311 VLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEF 375 (436)
T ss_pred EEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHH
Confidence 77555 45778899987 56799999999999999999999997 8999999999999999999
Q ss_pred HHHhceeEEEEcCCCCCC-CCCCcc--------CCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 488 MRALRVGSVWINCFDVFD-AAIPFG--------GYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 488 ~~~l~~g~V~iN~~~~~~-~~~pfg--------G~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
++++++|+||||+++.+. ...-++ |.+..|.+...+.-+.++|++.++|..
T Consensus 376 ~~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 376 ALRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred HhhCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 999999999999876522 111111 122223334445566788888888743
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-74 Score=617.91 Aligned_cols=416 Identities=17% Similarity=0.170 Sum_probs=362.8
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHH
Q 009035 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (546)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (546)
..+.+|+++++++|++||+ .|++++.++|.++|++++++|++++++|++++++|+||+..+.+..+.......+.+++
T Consensus 4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~ 81 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI 81 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999 89999999999999999999999999999999999999988765322333555555554
Q ss_pred HHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHH----HHHH
Q 009035 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLH 254 (546)
Q Consensus 179 ~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~----~~l~ 254 (546)
...+. .+. ...+.+...+.+++|+|||++|+|||||+....+++++||++||+||+|||+.+|.++..++ +++.
T Consensus 82 ~~~~~-~G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~ 159 (488)
T TIGR02518 82 KDMKT-IGI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE 159 (488)
T ss_pred hhCcc-cce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 43222 232 22233445688999999999999999999999999999999999999999999999999854 5558
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHH
Q 009035 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (546)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~ 334 (546)
++|+|+|++|++++.+.+.+..|+.||+||+|+||||+.+++.+ .. .++|+++|+|||+|+||++|||+|.|++.
T Consensus 160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~ 234 (488)
T TIGR02518 160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----YS-SGTPAIGVGPGNGPAYIERTANVKKAVRD 234 (488)
T ss_pred HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence 99999999999998888899999999999999999999976543 33 67999999999999999999999999999
Q ss_pred HHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHh-------hhhcccCCC-CCCCCccccCCCHHHHHHHHHHHHHHH
Q 009035 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL-------AMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGV 406 (546)
Q Consensus 335 i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~-------~~~~~vG~p-~~~~~~~Gpl~~~~~~~~~~~~i~~a~ 406 (546)
+++++|+|+||.|++.+|||||+++||+|+++|+++ .+.+++|+| +++++++||+++.++++++.++++.++
T Consensus 235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av 314 (488)
T TIGR02518 235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTV 314 (488)
T ss_pred HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcccc
Confidence 999999999999999999999999999999999998 899999996 678999999999999999999999999
Q ss_pred hCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHc----CCCCceEEEEcCCHH
Q 009035 407 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVFTHNLD 482 (546)
Q Consensus 407 ~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~----~~~gL~a~v~t~d~~ 482 (546)
.+|+++++||.. .+.++|++ .+|+||||++|++|+|+||||+++|+ ++|||+++|||+|.+
T Consensus 315 ~~gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~ 379 (488)
T TIGR02518 315 PEDAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKD 379 (488)
T ss_pred CCCCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHH
Confidence 999999999852 24677776 79999999999999999999999988 689999999999999
Q ss_pred HHHHHHHHhceeEEEEcCCCC---------CCCC--CCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 483 TANTLMRALRVGSVWINCFDV---------FDAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 483 ~a~~~~~~l~~g~V~iN~~~~---------~~~~--~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
++++|++++++|+||||++.. +.+. +-||+++.++.. .+-+++++++.|.|..+.+
T Consensus 380 ~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~~ 446 (488)
T TIGR02518 380 IVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGVR 446 (488)
T ss_pred HHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEeccc
Confidence 999999999999999996432 2222 226666666655 3899999999999988763
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-74 Score=586.58 Aligned_cols=449 Identities=33% Similarity=0.520 Sum_probs=409.3
Q ss_pred ceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
-.++|+.+. .|+..+++||.+ .+++++|..++.+|+++|++.|..|+. .|..+|+.+|+.+|++++++|+.+..+
T Consensus 116 p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~~ 191 (769)
T COG4230 116 PIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP--IWSATPPAERAAILERAADLMEAQMPQ 191 (769)
T ss_pred cccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 367777765 578899999997 578899999999999999999999988 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|..++++|.||++..+.. ||.+++++||||+.+++.-.+ ...++|+|++++|+|||||+.++..+++.
T Consensus 192 L~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g-----------~~~~~~~G~vVcISPWNFPLAIFtGqiaA 259 (769)
T COG4230 192 LMGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFG-----------NLTHRPLGPVVCISPWNFPLAIFTGQIAA 259 (769)
T ss_pred HHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccC-----------ccccCCCCcEEEECCCCchHHHHHhHHHH
Confidence 999999999999999876 999999999999998765222 14578999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+|+-||.++||+.+..-+++++|+|+|++++|+++|+|+++|..|..++++++|+||||+++++.|.+..+++.
T Consensus 260 AL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~ 339 (769)
T COG4230 260 ALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ 339 (769)
T ss_pred HHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988755
Q ss_pred --CcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 307 --LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 307 --~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
..|++.|.||-|.+||+.+|--++++..++.|+|..+||.|.+...+|+++++.|..++.|+-.+..+++|+|..-.+
T Consensus 340 g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~t 419 (769)
T COG4230 340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTT 419 (769)
T ss_pred CCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceec
Confidence 467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeC--CHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDE 460 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~--~~~e 460 (546)
++||+|+.+..+.+.++|+..+..|=.+.. -.... .+|.|+.||++.--. -.-++.|+||||+-|++|+ ++++
T Consensus 420 DVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q-~~~~~~~q~GtFv~Ptl~El~~--~~eL~rEVFGPVLHVvRy~~~~l~~ 496 (769)
T COG4230 420 DVGPVIDAEAKANIEKHIQTMRSKGRLVHQ-AAAPNSLQKGTFVAPTLIELEN--LDELQREVFGPVLHVVRYKRDELDE 496 (769)
T ss_pred cccccccHHHHHHHHHHHHHHHhcccchhh-ccCCCccCCceeeCceeEEcCC--HHHHHHHhccceeEEEEecHHHHHH
Confidence 999999999999999999999888744432 22222 479999999996322 2334789999999999995 7999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhheeeE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKA 535 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~ 535 (546)
.|+-+|.++|||+.+|+|+-.+++.++.+++++|++|||.-.. .---.||||.+.||.| +.+|+..|..|+..+.
T Consensus 497 vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p 574 (769)
T COG4230 497 VIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP 574 (769)
T ss_pred HHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999998543 2245899999999999 6899999999986544
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-74 Score=655.50 Aligned_cols=425 Identities=18% Similarity=0.275 Sum_probs=371.7
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHH
Q 009035 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (546)
Q Consensus 96 ~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 175 (546)
.....+.+|+++++++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||+.+++..++..+.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~ 82 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY 82 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 3457889999999999999999 89999999999999999999999999999999999999998876434444444444
Q ss_pred HHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH-
Q 009035 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (546)
Q Consensus 176 ~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~- 254 (546)
++.. .++..+. .+.+.....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 83 ~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~ 160 (862)
T PRK13805 83 NSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD 160 (862)
T ss_pred HHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence 4432 1222222 222224456889999999999999999999999999999999999999999999999999888865
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHH
Q 009035 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (546)
Q Consensus 255 ---~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a 331 (546)
++|+|+|+||++++.+.+.++.|+.|++||+|+||||+.+++ .++. +++|+++|+|||+|+||++|||++.|
T Consensus 161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~~-~~~pv~~e~gGk~p~iV~~dADl~~A 235 (862)
T PRK13805 161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVK----AAYS-SGKPALGVGAGNVPAYIDKTADIKRA 235 (862)
T ss_pred HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHH----HHHh-cCCCeEEECCCCCeEEEeCCCCHHHH
Confidence 689999999999987788999999999999999999998654 3444 78999999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCe
Q 009035 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (546)
Q Consensus 332 ~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~ 411 (546)
++.|++++|+|+||.|+++++||||+++||+|+++|+++ .+|+++.++++++.++|+++++.|+.
T Consensus 236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~---------------g~~l~~~~~~~~v~~~i~~a~~~~~~ 300 (862)
T PRK13805 236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH---------------GAYFLNKKELKKLEKFIFGKENGALN 300 (862)
T ss_pred HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh---------------CCeeCCHHHHHHHHHHHhhccCCCcC
Confidence 999999999999999999999999999999999999885 26899999999999999988766554
Q ss_pred E-ecCCccc---CCCCceeccee------eccCCCCCcccccccccceEEEEEeCCHHHHHHHHHc----CCCCceEEEE
Q 009035 412 L-ETGGERL---GAKGYYIKPTV------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVF 477 (546)
Q Consensus 412 v-~~gg~~~---~~~g~~~~Ptv------~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~----~~~gL~a~v~ 477 (546)
. +.||... ...|+|++||+ +.+++++|++++ |+||||++|++|+|+||||+++|+ ++|||+++||
T Consensus 301 ~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~ 379 (862)
T PRK13805 301 ADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIY 379 (862)
T ss_pred ccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 2 4466421 23588999997 778999999887 799999999999999999999988 4899999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCC----------CCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCCCCCCC
Q 009035 478 THNLDTANTLMRALRVGSVWINCFD----------VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 546 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~----------~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~ 546 (546)
|+|.++++++++++++|+||||.++ .+.+.+|||| |.||+|+.+|+.|+++|++.|+|..+...+-||
T Consensus 380 t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 380 TNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred CCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 9999999999999999999999875 3668899997 999999999999999999999999888777775
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-72 Score=553.94 Aligned_cols=469 Identities=26% Similarity=0.404 Sum_probs=430.2
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE- 141 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~- 141 (546)
...+..|||+.+... ..+...+|.+ +.+++++..++.++++.|+++|.+|+. .|..+|..+|.+|+++.|++++
T Consensus 58 ~evP~vIg~~~v~t~--~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlist 133 (561)
T KOG2455|consen 58 LEVPLVIGDKEVYTN--DEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIST 133 (561)
T ss_pred eeccEEECCeeeecC--CcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhcc
Confidence 456789999999854 4578889987 678999999999999999999999988 9999999999999999999999
Q ss_pred HcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccc-eeEEEEcCccchHHH
Q 009035 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVAGQIIPWNFPLLM 219 (546)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~-GVv~~i~p~n~P~~~ 219 (546)
+++-+|....+...||+..++...-+.+.++.+|+.+..+.++....... ..+..+...++|+ |.|..|+||||-...
T Consensus 134 kyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~ 213 (561)
T KOG2455|consen 134 KYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIG 213 (561)
T ss_pred hHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeec
Confidence 78888888899999999999876447788999999999998887765443 4566788889999 999999999999998
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
.....+||| +||+|++|||..+.++..++.++|+|||+|+|++|+||++++..++.+..+|++.++-||||+.+-+.+.
T Consensus 214 gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lw 292 (561)
T KOG2455|consen 214 GNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLW 292 (561)
T ss_pred cccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHH
Confidence 888889998 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC------CcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh
Q 009035 300 QLAAKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (546)
Q Consensus 300 ~~aa~~~------~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~ 373 (546)
+..++ + ..+++.|+||||.-+|+++||++.++...++++|-++||.|.+.+|+||+++.++.+.+.|.+...+
T Consensus 293 k~V~~-n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q 371 (561)
T KOG2455|consen 293 KKVGE-NVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQ 371 (561)
T ss_pred HHHHh-hhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhh
Confidence 98876 3 3578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-CCCCCccccCCCHHHHHHHHHHHHHHHhC-CCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEE
Q 009035 374 RVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 451 (546)
Q Consensus 374 ~~vG~p-~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~ 451 (546)
+++||| .|.++.+||+|+.+.|+|++++|++|+.. -.++++||+.+++.|+|+.|||+..-+|..+++.||+||||++
T Consensus 372 ~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLs 451 (561)
T KOG2455|consen 372 LKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLS 451 (561)
T ss_pred cccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeE
Confidence 999998 88899999999999999999999999854 4789999999999999999999999999999999999999999
Q ss_pred EEEeC--CHHHHHHHH-HcCCCCceEEEEcCCHHHHHHHHHHhc--eeEEEEcCCCCCC--CCCCccCCCCCCCC-Ccch
Q 009035 452 ILKYK--DLDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFD--AAIPFGGYKQSGQG-REKG 523 (546)
Q Consensus 452 v~~~~--~~~eai~~~-N~~~~gL~a~v~t~d~~~a~~~~~~l~--~g~V~iN~~~~~~--~~~pfgG~k~SG~g-~~~g 523 (546)
|..|+ +++|+++++ |.++|||+.+||++|.+.+.+..+.|+ +|+.|||+.++.. ...||||.++||.. ..+|
T Consensus 452 VyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGg 531 (561)
T KOG2455|consen 452 VYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGG 531 (561)
T ss_pred EEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCC
Confidence 99996 488999999 889999999999999999999999986 8999999976643 57899999999976 6899
Q ss_pred HHHHHhhheeeEEEE
Q 009035 524 SYSLSNYLQVKAVVT 538 (546)
Q Consensus 524 ~~~l~~~~~~k~v~~ 538 (546)
++-+..|+.+.++-.
T Consensus 532 p~~l~RwtSp~~ikE 546 (561)
T KOG2455|consen 532 PHYLLRWTSPLSIKE 546 (561)
T ss_pred ceEEEeecCcchhhh
Confidence 999999999877643
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-71 Score=582.85 Aligned_cols=374 Identities=19% Similarity=0.184 Sum_probs=337.8
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhh----------hccchHHHHHHHHHHH
Q 009035 110 SAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA----------QTEVPMTTRLFRYYAG 179 (546)
Q Consensus 110 ~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~----------~~ev~~~~~~l~~~a~ 179 (546)
++|++||+ .|+++|..+|.++|+++++.|++++++|+++++.|+||++.+.. ..|+..+++.+++++.
T Consensus 1 ~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~ 78 (397)
T cd07077 1 ESAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITA 78 (397)
T ss_pred ChHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 35788999 89999999999999999999999999999999999999965432 1278889999999987
Q ss_pred HhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHc---
Q 009035 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA--- 256 (546)
Q Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~a--- 256 (546)
...+..+...+. ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 79 ~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~ 155 (397)
T cd07077 79 SVGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAA 155 (397)
T ss_pred hcCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhc
Confidence 665554433332 2357899999999999999999999 9999999999999999999999999999999999987
Q ss_pred CCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHH
Q 009035 257 GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336 (546)
Q Consensus 257 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~ 336 (546)
|+|+++++++++.+.+.+..|+.|+++|+|+||||+++++.+.+.+. .+|+++|+||++|+||++|||++.|++.++
T Consensus 156 g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~ 232 (397)
T cd07077 156 HGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVH 232 (397)
T ss_pred CCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHH
Confidence 99999999999877789999999999999999999999999988663 589999999999999999999999999999
Q ss_pred HHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCC
Q 009035 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416 (546)
Q Consensus 337 ~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg 416 (546)
+++|+| ||.|+++++||||+++||+|+++|++++.. .|++++.||
T Consensus 233 ~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~ 277 (397)
T cd07077 233 DSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQET 277 (397)
T ss_pred HhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCc
Confidence 999999 999999999999999999999999997753 577777776
Q ss_pred cccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHH----HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhc
Q 009035 417 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD----EVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 492 (546)
Q Consensus 417 ~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~----eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~ 492 (546)
+ ++|+.|| ++|.+++||+||||++|++|+|++ +|++++|+++|||+++|||+|.+++++++++++
T Consensus 278 ~-----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~ 346 (397)
T cd07077 278 K-----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYID 346 (397)
T ss_pred e-----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCC
Confidence 3 4677786 788999999999999999999996 666688999999999999999999999999999
Q ss_pred eeEEEEcCCCCCC--CCCCccCCC--CCCCCCcch-HHHHHhhheeeEEE
Q 009035 493 VGSVWINCFDVFD--AAIPFGGYK--QSGQGREKG-SYSLSNYLQVKAVV 537 (546)
Q Consensus 493 ~g~V~iN~~~~~~--~~~pfgG~k--~SG~g~~~g-~~~l~~~~~~k~v~ 537 (546)
+|+||||+..... ..+||||.| .||+|+++| .+++++|++.|+|+
T Consensus 347 ~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 347 TASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 9999999876654 678999999 899999999 99999999999985
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-69 Score=605.24 Aligned_cols=379 Identities=18% Similarity=0.206 Sum_probs=330.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhc---------------cch
Q 009035 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT---------------EVP 168 (546)
Q Consensus 104 dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~---------------ev~ 168 (546)
+++..+++|++||. .|+.+|.++|.++|++++++|+++.++|+ .++||++.+++.. |+.
T Consensus 287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~ 360 (715)
T TIGR01092 287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS 360 (715)
T ss_pred HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence 48888999999999 89999999999999999999999999986 4888888876532 367
Q ss_pred HHHHHHHHHHHHhhHhcCcccC---CCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHH
Q 009035 169 MTTRLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245 (546)
Q Consensus 169 ~~~~~l~~~a~~a~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t 245 (546)
.+++.+++++.. .+..+...+ ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|++
T Consensus 361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t 437 (715)
T TIGR01092 361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS 437 (715)
T ss_pred HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence 788888888873 333333332 122334578999999999999999 9999 5899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC----cEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEE
Q 009035 246 ALYVSKLLHEAGLPPG----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (546)
Q Consensus 246 ~~~l~~~l~~aGlP~g----vv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~i 321 (546)
+..|++++.++ +|+| +++++++ +++.++.|..|+++|+|+||||+.+|+.|++.++ +|+++|+|||||+|
T Consensus 438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i 511 (715)
T TIGR01092 438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence 99999999999 9987 6899985 5778889999999999999999999999998763 89999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 009035 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (546)
Q Consensus 322 V~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~ 401 (546)
|++|||++.|++.+..+.|.+ ||.|++++|||||+++||+ | .+.++
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~ 557 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDL 557 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHH
Confidence 999999999987777776655 9999999999999999985 0 25677
Q ss_pred HHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCH
Q 009035 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481 (546)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 481 (546)
++.++++|++++ ||.... .|+. ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 558 v~~~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~ 628 (715)
T TIGR01092 558 IDMLRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDE 628 (715)
T ss_pred HHHHHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCH
Confidence 888888999985 775421 2432 1357899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCC----cchHHHHHhhheeeEEEEeC
Q 009035 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR----EKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 482 ~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~----~~g~~~l~~~~~~k~v~~~~ 540 (546)
++++++++++++|.||||+++.+.+.+||||+|.||+|+ ++|++++++||+.|+|+...
T Consensus 629 ~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 629 NVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred HHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 999999999999999999987667788999999999995 48999999999999998764
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-69 Score=563.38 Aligned_cols=363 Identities=54% Similarity=0.861 Sum_probs=343.4
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC
Q 009035 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190 (546)
Q Consensus 111 ~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~ 190 (546)
+|++++. .|+.++.++|.++|+++++.|.++.++|++++++|+|||+.++.. |+..+++.++|++.+.++..+...+
T Consensus 2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~ 78 (367)
T cd06534 2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELP 78 (367)
T ss_pred hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5788888 899999999999999999999999999999999999999998775 9999999999999988777653322
Q ss_pred -CCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009035 191 -ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (546)
Q Consensus 191 -~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~ 269 (546)
...+...+++++|+|||++|.|||+|+...++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++++++++
T Consensus 79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~ 158 (367)
T cd06534 79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG 158 (367)
T ss_pred ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence 2345668899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccC
Q 009035 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349 (546)
Q Consensus 270 ~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a 349 (546)
+++.+..|..|+++|.|+||||+++++.|.+.+++ +++|+++|+||+|++||++|+|++.|++.+++++|.++||.|++
T Consensus 159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 77789999999999999999999999999999887 68999999999999999999999999999999999999999999
Q ss_pred CCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecce
Q 009035 350 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 429 (546)
Q Consensus 350 ~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Pt 429 (546)
+++||||++++|+|+++|+ |
T Consensus 238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t 257 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T 257 (367)
T ss_pred CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence 9999999999999999997 6
Q ss_pred eeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCC
Q 009035 430 VFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAI 508 (546)
Q Consensus 430 v~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~ 508 (546)
|+.+++++++++++|+||||++|++|++++|+|+++|++++||+++|||+|.+.+++++.++++|+|+||+.+.. .+.+
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~ 337 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEA 337 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 777888899999999999999999999999999999999999999999999999999999999999999998877 7889
Q ss_pred CccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 509 PFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 509 pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
||||.|.||+|+++|++++++|++.|+++
T Consensus 338 pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 338 PFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 99999999999999999999999999974
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-69 Score=567.77 Aligned_cols=373 Identities=19% Similarity=0.203 Sum_probs=321.1
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHH------HHHhcCCCh------hhhhhccchHHHHHHHHHHH
Q 009035 112 ARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL------ETWDNGKPF------EQSAQTEVPMTTRLFRYYAG 179 (546)
Q Consensus 112 A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~~ev~~~~~~l~~~a~ 179 (546)
|++||+ .|+++|..+|.++|++++++|+++.++|+++ +++|+|||. .++. .|+..+++.++||+.
T Consensus 1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~ 77 (398)
T TIGR00407 1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIE 77 (398)
T ss_pred ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhc
Confidence 467888 8999999999999999999999999999999 999999993 2233 489999999999998
Q ss_pred HhhHhcCcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHH----
Q 009035 180 WADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL---- 252 (546)
Q Consensus 180 ~a~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~---- 252 (546)
.++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++++
T Consensus 78 ~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~a 154 (398)
T TIGR00407 78 LADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDA 154 (398)
T ss_pred CCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHH
Confidence 88654 443332 23456788999999999999997 6 67889999999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEeCCc-hhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHH
Q 009035 253 LHEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (546)
Q Consensus 253 l~~aGlP~gvv~vv~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a 331 (546)
+.++|+|+|++|+|++.+ ++.++.|..||+||+|+||||+.+++.+++. ..+|+++|+|||||+||++|||+|.|
T Consensus 155 l~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~A 230 (398)
T TIGR00407 155 LAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKA 230 (398)
T ss_pred HHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHH
Confidence 559999999999999754 4578899999999999999999999988764 45799999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCe
Q 009035 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (546)
Q Consensus 332 ~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~ 411 (546)
++.+++++|++ ||.|++++|+|||+++||+|+++|++++.++++ .+++ .+.+.+++..
T Consensus 231 a~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~------- 288 (398)
T TIGR00407 231 IKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL------- 288 (398)
T ss_pred HHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc-------
Confidence 99999999975 999999999999999999999999999987543 1221 1333333321
Q ss_pred EecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh
Q 009035 412 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 491 (546)
Q Consensus 412 v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 491 (546)
|| ||++ ..+|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++
T Consensus 289 ---g~-----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i 351 (398)
T TIGR00407 289 ---GP-----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGV 351 (398)
T ss_pred ---cC-----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhC
Confidence 11 3554 233789999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEcCCCCCCCCCCccCCCC-----CCCCCcchHHHHHhhheee
Q 009035 492 RVGSVWINCFDVFDAAIPFGGYKQ-----SGQGREKGSYSLSNYLQVK 534 (546)
Q Consensus 492 ~~g~V~iN~~~~~~~~~pfgG~k~-----SG~g~~~g~~~l~~~~~~k 534 (546)
++|+||||+++.+.+..||| .+. ++.....|+.+++.||..|
T Consensus 352 ~~G~v~iN~~~~~~~~~pfG-~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 352 DSAAVYHNASTRFTDGFRFG-FGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred CeeEEEEeCCCCcCCCcccc-cceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999999998888888997 332 2345678999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-70 Score=526.39 Aligned_cols=467 Identities=29% Similarity=0.501 Sum_probs=434.3
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (546)
-..+|+|-. +|..+..++|++.++|+++..++.+|-+.+++.|++|.+ .|-.+|+..|.++.+++.|.|+...+.|
T Consensus 22 gvy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~l 97 (507)
T KOG2453|consen 22 GVYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNL 97 (507)
T ss_pred ceeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHH
Confidence 356779954 788999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCC-CceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
-+++++|+||-+.+.- .|+++-++.++|..++.+.+.+...|...+ +.....|.|+|+|++|+.+|||....-|.-..
T Consensus 98 g~lvslemgkilaegv-gevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnai 176 (507)
T KOG2453|consen 98 GKLVSLEMGKILAEGV-GEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAI 176 (507)
T ss_pred hhhhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchh
Confidence 9999999999998875 599999999999999999999998887654 44566899999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHH----HHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 227 ALACGNTIVLKTAEQTPLSALYV----SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l----~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
||.+||+|++||++.+|+++... .+.|.+-.+|++......| +.+.++++..+.++..+.||||+++++.+.+..
T Consensus 177 aMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~v 255 (507)
T KOG2453|consen 177 AMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQV 255 (507)
T ss_pred hhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHH
Confidence 99999999999999999988654 4556666899999999988 788999999999999999999999999999988
Q ss_pred hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
.+ +..+..+||||+|+.||.+|||+..++...++++...+||.|+...|++||+++||+.+++|+....++++|+|+|+
T Consensus 256 qa-rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ 334 (507)
T KOG2453|consen 256 QA-RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDS 334 (507)
T ss_pred HH-HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCC
Confidence 77 45678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 462 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai 462 (546)
++-+|||.+.+...+.+.-|+++++.|.+++.||+..+.+|+|++|||++ ...|.++..+|.|.||+.|.+|.+++||+
T Consensus 335 ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ 413 (507)
T KOG2453|consen 335 NTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAI 413 (507)
T ss_pred CceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhh
Confidence 99999999999999999999999999999999999888999999999997 88999999999999999999999999999
Q ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHH--hceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 463 QRSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 463 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~--l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+.-|+-+.||+.+|||.|...+-|..-- -++|.|.||-++.. .-.-.|||-|..|.||+.|.+++++|++..+.+++
T Consensus 414 ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctin 493 (507)
T KOG2453|consen 414 AINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTIN 493 (507)
T ss_pred eeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeee
Confidence 9999999999999999999999888854 48999999986542 23457999999999999999999999999999998
Q ss_pred CCC
Q 009035 540 LKN 542 (546)
Q Consensus 540 ~~~ 542 (546)
|.+
T Consensus 494 ysk 496 (507)
T KOG2453|consen 494 YSK 496 (507)
T ss_pred ccc
Confidence 854
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=309.78 Aligned_cols=361 Identities=17% Similarity=0.143 Sum_probs=254.5
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH----HcHHHHHHHHHHhcCCChhhhhhccchHHHHHHH--
Q 009035 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE----RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR-- 175 (546)
Q Consensus 102 ~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~----~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~-- 175 (546)
..++++..+..+...+ ....++.++..+++.++++.+. ..+.+..+.+..-+|.+...... .+......++
T Consensus 4 ~~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~-a~~~l~~~~~r~ 80 (422)
T cd07080 4 APDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLRE-GLKRLMALFRRE 80 (422)
T ss_pred HHHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHH-HHHHHHHHcCHH
Confidence 3445555554444333 4567888888888888887774 34455566666667776443322 3333333332
Q ss_pred HHHHH-hhHhcCc-cc--CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHH
Q 009035 176 YYAGW-ADKIQGL-TA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251 (546)
Q Consensus 176 ~~a~~-a~~~~~~-~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~ 251 (546)
..... .+++... .+ ....+...++.++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..|.+
T Consensus 81 ~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~ 159 (422)
T cd07080 81 NLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR 159 (422)
T ss_pred HHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence 11111 1111100 00 0111345678999999999999999999 799999999999999999999999999999999
Q ss_pred HHHHcCCCC----CcEEEE--eCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCc-EEEec
Q 009035 252 LLHEAGLPP----GVLNIV--SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP-FIVCE 324 (546)
Q Consensus 252 ~l~~aGlP~----gvv~vv--~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p-~iV~~ 324 (546)
+|.++ +|+ +.++++ +|.++++++.|..++ |.|+||||+++++.|++.++. + +.++|+|||++ +|+.+
T Consensus 160 ~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~ 233 (422)
T cd07080 160 SLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDR 233 (422)
T ss_pred HHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecH
Confidence 99999 787 888888 465666889999886 999999999999999998875 4 56999999955 55555
Q ss_pred CC----CHHHHHHHHHHHHhccCCCcccCCCeEEEcccc---hHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHH
Q 009035 325 DA----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV---YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (546)
Q Consensus 325 dA----Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v---~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (546)
++ |++.+++.+++++|.++||.|.|+++||||+++ +++|.++|.++++++.-..|... + +.+...+
T Consensus 234 ~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~------~-~~~~~~~ 306 (422)
T cd07080 234 EALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALS------L-SAAESAK 306 (422)
T ss_pred HhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCC------C-CHHHHHH
Confidence 58 999999999999999999999999999999999 99999999999988754333221 1 3344444
Q ss_pred HHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
+...-..+...+...... .+. .-||+..-.+. + .....+=.+.|.++++++|++..++. |--|+++|
T Consensus 307 ~~~~r~~~~~~~~~~~~~----~~~----~~~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~ 373 (422)
T cd07080 307 IARARLEAEFYELKGGVS----RDL----GWTVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLA 373 (422)
T ss_pred HHHHHHHHHHHHHhcCCC----CCC----CeEEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEee
Confidence 443333222222211111 111 22444332222 1 11466778899999999999999986 77799999
Q ss_pred cCCHHHHHHHHHHhce
Q 009035 478 THNLDTANTLMRALRV 493 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~ 493 (546)
..+.+. .++++++..
T Consensus 374 ~~~~~~-~~~~~~l~~ 388 (422)
T cd07080 374 PSPAEL-AELADALAA 388 (422)
T ss_pred cChhhH-HHHHHHHHH
Confidence 988877 788888753
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=287.26 Aligned_cols=385 Identities=20% Similarity=0.247 Sum_probs=304.4
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHh------cCCChhhhhh-----ccchHHH
Q 009035 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWD------NGKPFEQSAQ-----TEVPMTT 171 (546)
Q Consensus 103 ~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e------~Gk~~~~a~~-----~ev~~~~ 171 (546)
.++.+..+.|++|.. ....++..+|.+.|..+++.|+++.++|.++..+| +|.+-..... ..+...+
T Consensus 3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma 80 (417)
T COG0014 3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMA 80 (417)
T ss_pred hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHH
Confidence 456778888999988 89999999999999999999999999999888776 3433211100 0233344
Q ss_pred HHHHHHHHHhhHhcCccc--CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHH
Q 009035 172 RLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (546)
Q Consensus 172 ~~l~~~a~~a~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l 249 (546)
+.++..+.+.+.+..... ..+.+...+..+.|+||+++| |..-........+.||++||+||||.+..+..+...|
T Consensus 81 ~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai 158 (417)
T COG0014 81 DGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAI 158 (417)
T ss_pred HHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHH
Confidence 444444444443322111 134677889999999999999 7777777888888999999999999999999999988
Q ss_pred HHHHH----HcCCCCCcEEEEeCCch-hHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEec
Q 009035 250 SKLLH----EAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (546)
Q Consensus 250 ~~~l~----~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~ 324 (546)
.++++ ++|+|++.||+++..++ ++.+.|.....||.|+..||....+.|.+.+ -.||+-.+-|+|.++|++
T Consensus 159 ~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyvd~ 234 (417)
T COG0014 159 VEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYVDE 234 (417)
T ss_pred HHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEecc
Confidence 87655 66999999999997544 4555566677899999999999888886654 379999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 009035 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (546)
Q Consensus 325 dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~ 404 (546)
+||+|.|...++.++....+ .|++.+.++||+.+.++|+.+|.+.+..
T Consensus 235 ~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~------------------------------- 282 (417)
T COG0014 235 SADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQE------------------------------- 282 (417)
T ss_pred cCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHh-------------------------------
Confidence 99999999999999999998 9999999999999999999999886652
Q ss_pred HHhCCCeEecCCcccCCCCceecceeecc--CCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHH
Q 009035 405 GVDGGAKLETGGERLGAKGYYIKPTVFTG--VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482 (546)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~--v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~ 482 (546)
.|.++........ ++.+ .+....-+..|...+++.|..+++++|||+++|....+++-+|.|+|..
T Consensus 283 ---~gvelr~d~~~~~---------~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~ 350 (417)
T COG0014 283 ---AGVELRGDAEALA---------LLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYA 350 (417)
T ss_pred ---cCeEEEcCHHHHH---------hccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHH
Confidence 2333332221100 1111 2233344678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhceeEEEEcCCCCCCCCCCccC---CCCC-CCCCcchHHHHHhhheeeEEEEe
Q 009035 483 TANTLMRALRVGSVWINCFDVFDAAIPFGG---YKQS-GQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 483 ~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG---~k~S-G~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
.+++|...+++..||||..+.|..+.-||= ++.| ...+..|+-||+++|..|.++..
T Consensus 351 ~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G 411 (417)
T COG0014 351 NAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG 411 (417)
T ss_pred HHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence 999999999999999999999887766652 2222 34577899999999999998764
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=232.03 Aligned_cols=381 Identities=20% Similarity=0.215 Sum_probs=293.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHH------hcCCChhhhhhcc-----chHHHHH
Q 009035 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTE-----VPMTTRL 173 (546)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~------e~Gk~~~~a~~~e-----v~~~~~~ 173 (546)
+++..+.||++++ ..+.++.++|.++|.+++++|+.+..++..+... +.|.....-.... +......
T Consensus 2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHH
Confidence 4566778899988 8999999999999999999999887776654433 4553322211111 2222223
Q ss_pred HHHHHHHhhHhcCccc---CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHH
Q 009035 174 FRYYAGWADKIQGLTA---PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 250 (546)
Q Consensus 174 l~~~a~~a~~~~~~~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~ 250 (546)
++..+. .....|... ...++..-+....|+||.++| |....-.+..-.+.|++.||.+++|....+..+...|.
T Consensus 80 ~~~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~ 156 (433)
T KOG4165|consen 80 LRQIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH 156 (433)
T ss_pred HHHHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence 333333 111122221 134566778899999999999 66666666666778999999999999999999999999
Q ss_pred HHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCC
Q 009035 251 KLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326 (546)
Q Consensus 251 ~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dA 326 (546)
++.++| |.|.+.++++.. .+++.+.|.....||.|+..||+...+.|... ..+||.-+-.|.+.++|++||
T Consensus 157 ~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 157 KLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEecccc
Confidence 888877 678999999987 67888888888899999999999998888654 348999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCcccCCCeEEEccc-chHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHH
Q 009035 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405 (546)
Q Consensus 327 Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~-v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a 405 (546)
|+++|.+.+..+++.+.. .|++...+++|++ ....|++.|...+.
T Consensus 232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~--------------------------------- 277 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK--------------------------------- 277 (433)
T ss_pred CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------
Confidence 999999999999988876 8999999999998 34556655544332
Q ss_pred HhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHH
Q 009035 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 485 (546)
Q Consensus 406 ~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~ 485 (546)
.+|.++.+|.+ ...-..| -+|+..-++.|.-.-.++|-.+++.++||+.+|..+.+++-.|.|+|...++
T Consensus 278 -~~gVtl~agpk-l~~~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae 347 (433)
T KOG4165|consen 278 -EEGVTLHAGPK-LAALLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAE 347 (433)
T ss_pred -hcCeEEecChh-HHhhcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHH
Confidence 45666655443 2111111 1455566778888889999999999999999999999999999999999999
Q ss_pred HHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhheeeEEEEe
Q 009035 486 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 486 ~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g----~~~g~~~l~~~~~~k~v~~~ 539 (546)
+|.+.+++..|+.|..+.|..++-||=--+-|+. +..|+.|++-.+.+|++...
T Consensus 348 ~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 348 HFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred HHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 9999999999999999999988888633344432 46799999999999998665
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-15 Score=160.22 Aligned_cols=374 Identities=18% Similarity=0.179 Sum_probs=239.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHc--HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHH--HHhh-HhcCcccCCC---CC
Q 009035 123 RMTAYERSKIILRFADLLERH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA--GWAD-KIQGLTAPAD---GP 194 (546)
Q Consensus 123 ~~~~~~R~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a--~~a~-~~~~~~~~~~---~~ 194 (546)
.+|.++..++|.++++.+... .....+.+..-+|.+....+. +.....+++.-. ...+ ++ +.....+ ..
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~--l~~~~~~~~r~~L~~~l~~el-~~~~~Ld~~~~~ 78 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY--LEALMRWFRRENLERKLEREL-GNPESLDGWVPR 78 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH--HHHHHHhcCHHHHHHHHHHhc-CCHhHhhccccc
Confidence 467777777777777777642 222555566667766544321 222222221110 0011 11 1111011 11
Q ss_pred CceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCC----CcEEEE--eC
Q 009035 195 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--SG 268 (546)
Q Consensus 195 ~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~----gvv~vv--~g 268 (546)
...+..+.|+|++++|.|.|-|+..+. .++.+|++||..|+|.|...|.++..|.+.|.+. .|. ..+.++ ++
T Consensus 79 ~~~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~ 156 (399)
T PF05893_consen 79 GDGYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPG 156 (399)
T ss_pred ccchhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecC
Confidence 226788999999999999999997666 5777899999999999999999999999999887 554 345666 45
Q ss_pred CchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCccc
Q 009035 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348 (546)
Q Consensus 269 ~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~ 348 (546)
.+.++.+.+.. ..|.|+.+||.++.+.|.+... ..++.+....-.+-.+|..+++++.+++.++.-.+...+|.|.
T Consensus 157 ~d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCs 232 (399)
T PF05893_consen 157 GDEELEEALSQ--QADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACS 232 (399)
T ss_pred CchHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccC
Confidence 56677777764 5899999999999999988443 3455666666677788888889999999999999999999999
Q ss_pred CCCeEEEc---ccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH-----HHHhCCCeEecCCcccC
Q 009035 349 AGSRTFVH---ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR-----SGVDGGAKLETGGERLG 420 (546)
Q Consensus 349 a~~~v~V~---~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~-----~a~~~Ga~v~~gg~~~~ 420 (546)
|++.|||. +.-.++|.++|.+.+.+..---|... .+......+....+ .+...+..+..+...
T Consensus 233 Sp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-- 303 (399)
T PF05893_consen 233 SPQVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN-- 303 (399)
T ss_pred CCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC--
Confidence 99999999 33468888888777765421111111 12222222322222 244444445422221
Q ss_pred CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEc
Q 009035 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWIN 499 (546)
Q Consensus 421 ~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN 499 (546)
..||+....+ ......++=.+.|.++++++|++..+|....=-|++++... .....+++.+ ..|.--|
T Consensus 304 ------~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri- 372 (399)
T PF05893_consen 304 ------SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI- 372 (399)
T ss_pred ------CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee-
Confidence 2355543221 12334556789999999999999999988542378887654 5566666644 4553333
Q ss_pred CCCCCCCCCCccCCCCCCCC-CcchHHHHHhhhee
Q 009035 500 CFDVFDAAIPFGGYKQSGQG-REKGSYSLSNYLQV 533 (546)
Q Consensus 500 ~~~~~~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~ 533 (546)
.|.|-+-.--.| ..-|.+.|.+|+++
T Consensus 373 --------v~~G~m~~~~~g~~hDG~~~L~~lvRw 399 (399)
T PF05893_consen 373 --------VPLGQMLDFDPGWPHDGMYPLRRLVRW 399 (399)
T ss_pred --------CCCCcCCCCCCCCCcCCHhHHHHHhCC
Confidence 233322211111 34567888888763
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.9e-15 Score=126.28 Aligned_cols=144 Identities=26% Similarity=0.283 Sum_probs=120.3
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcc----cCCCCceecceeeccCC
Q 009035 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGYYIKPTVFTGVK 435 (546)
Q Consensus 360 ~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~----~~~~g~~~~Ptv~~~v~ 435 (546)
.....+.|+++++.+++-+...++++. .+..+++.++|++ .+...|.. ....|+|..||++. |+
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS------~~~~~~r~~yl~~ya~~~f~~~tiLs-vt 75 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQS------EDPLDGRFIYLPGYAEGNFVGPTILS-VT 75 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcC------cCccCCceEEeeccccCCcccceEEE-ec
Confidence 466778888999999998888888887 5666777777775 13333321 12578999999998 99
Q ss_pred CCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCC-CCCCCCCCccCCC
Q 009035 436 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYK 514 (546)
Q Consensus 436 ~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~-~~~~~~~pfgG~k 514 (546)
|+|.++.||+||||+..+.-.+++|+|..+|+++||-...|||.+.++++.+.+..++|.|.+|.. +...+...|.|-+
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999985 4444556676654
Q ss_pred C
Q 009035 515 Q 515 (546)
Q Consensus 515 ~ 515 (546)
.
T Consensus 156 ~ 156 (157)
T KOG2449|consen 156 K 156 (157)
T ss_pred C
Confidence 3
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-10 Score=109.16 Aligned_cols=203 Identities=18% Similarity=0.226 Sum_probs=143.8
Q ss_pred CcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHH
Q 009035 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (546)
Q Consensus 318 ~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (546)
+-+||++|.|++.|+..++.++-.--| ..+.-.|+|||++.|+|+++++.+++.+ ++.+. +...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~va-----~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQVA-----NHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chhhc-----cCcHHHH
Confidence 347999999999999999999865544 4566779999999999999999988643 33222 2233555
Q ss_pred HHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC--CCCceEE
Q 009035 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS--QYGLAAG 475 (546)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~--~~gL~a~ 475 (546)
..+.++ .-+++++.+... ..-..-.|.++.+++.... - .--.+|+++..|++..||++++++. +|+ +.+
T Consensus 73 sl~~i~---~l~~~~I~~~~~--~~~~~aSPilV~d~~h~~f--g-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVs 143 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFE--NVPPPASPILVCDFTHSYF--G-DGPTGVITLHTFRTPKEAIELCAKETLPFD-SVS 143 (215)
T ss_pred HHHHHH---hcCCeEEEeccc--CCCCCCCCEEEcCCCHHHc--C-CCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEE
Confidence 555554 568899887432 1223447888887665421 2 2445899999999999999999976 455 999
Q ss_pred EEcCCHHHHHHHHHHhceeEEEEcCCCC-CCCCCCccCCCCCCC--CCcchHHHHHhhheeeEEEEeCCC
Q 009035 476 VFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQ--GREKGSYSLSNYLQVKAVVTALKN 542 (546)
Q Consensus 476 v~t~d~~~a~~~~~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~--g~~~g~~~l~~~~~~k~v~~~~~~ 542 (546)
||++-.+.+-+++.+|++..+||||... ..|-.++-..+..-- -+..=.+.|..+-+.|.|+.++..
T Consensus 144 iW~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~~~~~~~~v~i~~gyHYE~l~~~~~~k~IVFP~~~ 213 (215)
T PF07368_consen 144 IWNEKLASAYELAARLPCDTFYINCFNVDLSPIMPFFAARKNDVLIANGYHYETLTIGGKRKIIVFPIGT 213 (215)
T ss_pred EeCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhhhhcCCceEEEECCeeEEEEEECCeEEEEEEeccc
Confidence 9999999999999999999999999754 445555443332210 011112345566677887777654
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.2e-07 Score=109.90 Aligned_cols=110 Identities=17% Similarity=0.088 Sum_probs=88.1
Q ss_pred ccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 009035 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (546)
Q Consensus 188 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~ 267 (546)
.+|.++|..+..+..|+|++++|+||| ..++.+++.||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~- 1129 (1208)
T PRK11905 1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI- 1129 (1208)
T ss_pred cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc-
Confidence 457788999999999999999999999 557889999999999999999998752 22 23676656555
Q ss_pred CCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCC--cceEeec
Q 009035 268 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLEL 314 (546)
Q Consensus 268 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~--~pv~lel 314 (546)
.++..+..+++++.|.|+|++++.+.|.+..+++.+ .|++.|.
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 234567788899999999999999999999988653 4444444
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.14 Score=53.90 Aligned_cols=262 Identities=18% Similarity=0.209 Sum_probs=123.0
Q ss_pred CCCceeeeeccceeEEEEcCc-cchHH-HHHHHHHHHhhcCCeEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 009035 193 GPYHVQTLHEPIGVAGQIIPW-NFPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g 268 (546)
.|......+.|+--|++..|. .+|+. +.+...+||-.+|..=|+ -|+...-.....+.-..+.+|..+ +--+ |
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G 172 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G 172 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE---
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c
Confidence 355567889999999999993 34442 234457899999976554 443332222333444556667753 2223 2
Q ss_pred CchhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEee-cCCcCc--EEEecCCCHHHHHHHHHHHHhc
Q 009035 269 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE-LGGKSP--FIVCEDADVDKAAELAHYALFF 341 (546)
Q Consensus 269 ~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~le-lgG~~p--~iV~~dADl~~a~~~i~~~~f~ 341 (546)
|...-.+|. .-|+||+|+=.|..=+..+=...... |-.. +-|.+= +|-+++||.+..+..++.-+=+
T Consensus 173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~-----V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH 246 (412)
T PF00815_consen 173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGD-----VGIDMIAGPSEVLVIADETANPEFVAADLLAQAEH 246 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS------EES------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCC-----cccCCCCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence 444434444 24899999988886543321111111 1111 123333 3445678999987777665544
Q ss_pred cCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC
Q 009035 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (546)
Q Consensus 342 ~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (546)
... .+.++|..+ +++.++..+.+.+.--. +... +.++.+.+
T Consensus 247 d~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~-----------l~r~-------~i~~~sl~-------------- 287 (412)
T PF00815_consen 247 DPD-----AQAVLVTTS--EELAEAVEAEVERQLEE-----------LPRR-------EIAEKSLE-------------- 287 (412)
T ss_dssp -TT------EEEEEES---HHHHHHHHHHHHHHHTT------------TTH-------HHHHHHHT--------------
T ss_pred CCC-----CceEEEECC--HHHHHHHHHHHHHHHHh-----------CCch-------HHHHHHHH--------------
Confidence 433 233566555 44444444433321100 0000 11121111
Q ss_pred CCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEcC
Q 009035 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 500 (546)
Q Consensus 422 ~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN~ 500 (546)
+ -.++.++|++||++++|..-.= ...|.++|.. .+..++ .+|.|++..
T Consensus 288 ------------------------~---g~ii~~~~l~ea~~~~N~~APE-HLel~~~~~~---~~~~~i~~AGaiFlG~ 336 (412)
T PF00815_consen 288 ------------------------N---GAIIVVDSLEEAIELANEYAPE-HLELQVEDPE---ELLEKIRNAGAIFLGE 336 (412)
T ss_dssp ------------------------T----EEEE-SSHHHHHHHHHHH--S-EEEEESTTHH---HHGGG--S-SEEEEST
T ss_pred ------------------------C---CeEEEECCHHHHHHHHHHhhHH-HHHHHHcCHH---HHHHHhhccChhhcCC
Confidence 1 1455789999999999986444 6788899864 566666 599999998
Q ss_pred CCC---------CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 501 FDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 501 ~~~---------~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
++. .++-+|- +|.+|+.|.-+.+.|++..++..
T Consensus 337 ~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 378 (412)
T PF00815_consen 337 YTPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISVQR 378 (412)
T ss_dssp T--HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEEEE
T ss_pred CCCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeEEE
Confidence 653 1123454 45677888888999999877643
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.27 Score=51.48 Aligned_cols=266 Identities=20% Similarity=0.253 Sum_probs=147.2
Q ss_pred CCCceeeeeccceeEEEEcC---ccchHHHHHHHHHHHhhcCCeEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 009035 193 GPYHVQTLHEPIGVAGQIIP---WNFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN~VVl--kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~ 267 (546)
.|......+.|+--|++..| .-||-..++ ...||-.+|+.=|+ -|....- ....+.-..+.+|+.+ ++. +
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~-v- 180 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK-V- 180 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-c-
Confidence 45667889999999999999 566665555 46789999986543 4444321 1222222334445443 111 1
Q ss_pred CCchhHHHHHHcC----CCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEE-ecCCCHHHHHHHHHHHHhcc
Q 009035 268 GYGPTAGAALASH----MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV-CEDADVDKAAELAHYALFFN 342 (546)
Q Consensus 268 g~~~~~~~~L~~~----~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV-~~dADl~~a~~~i~~~~f~~ 342 (546)
| |...-.+|.-. +.||+|+=.|..=+.- ++..-. +..-+=+.-|-..-+|| ++++|.+..+..++.-+=+.
T Consensus 181 G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVta--AKr~v~-g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd 256 (425)
T COG0141 181 G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTA--AKRLVS-GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHD 256 (425)
T ss_pred c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHH--HHHHhh-CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcC
Confidence 2 44444555544 8899999888865422 111111 11222222233333444 44589998877666554443
Q ss_pred CCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCC
Q 009035 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (546)
Q Consensus 343 ~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (546)
. ..+.|+|..+ ++|.++..+.+.+..- ...+ .+.+.++..
T Consensus 257 ~-----~a~aiLvT~s--~~la~~v~~~v~~~l~-----------------~l~~-~ei~~~~l~--------------- 296 (425)
T COG0141 257 P-----DAQAILVTDS--EELAEAVEAAVERQLE-----------------TLPR-AEIARKALE--------------- 296 (425)
T ss_pred C-----CceEEEEeCc--HHHHHHHHHHHHHHHH-----------------hccH-HHHHHHHHH---------------
Confidence 2 2444666555 5555555554433110 0000 111111110
Q ss_pred CceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEcCC
Q 009035 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF 501 (546)
Q Consensus 423 g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN~~ 501 (546)
-|| .|+.++|++|+++++|..-.= ..-|.++|+. .+..++ ++|.|+++.+
T Consensus 297 ----------------------~~g---~iilv~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nAGsIFlG~~ 347 (425)
T COG0141 297 ----------------------NYG---AIILVDDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNAGSIFLGHY 347 (425)
T ss_pred ----------------------hCC---eEEEECCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhcccceeeecCC
Confidence 111 456779999999999986443 5678888865 566666 5999999987
Q ss_pred CCCCCCCCccC----CCCCCCCCcchHHHHHhhheeeEE
Q 009035 502 DVFDAAIPFGG----YKQSGQGREKGSYSLSNYLQVKAV 536 (546)
Q Consensus 502 ~~~~~~~pfgG----~k~SG~g~~~g~~~l~~~~~~k~v 536 (546)
+.....==..| ...+|+-|..+.-++..|++.-++
T Consensus 348 sPe~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv 386 (425)
T COG0141 348 SPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTV 386 (425)
T ss_pred CCccccccccCCCccCCCCccchhcCCccHHHhhhHHHH
Confidence 54210000111 234566677777777777776543
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.53 Score=49.77 Aligned_cols=266 Identities=17% Similarity=0.187 Sum_probs=146.4
Q ss_pred CCCceeeeeccceeEEEEcCc-cchHH-HHHHHHHHHhhcCCeEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 009035 193 GPYHVQTLHEPIGVAGQIIPW-NFPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g 268 (546)
.|......+.|+--|++..|. .+|+. +.+...+||-.+|+.=|+ -|+.........|+ ..+.+|+.+ |..-
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e----Iy~v 179 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE----IYVL 179 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe----ehhc
Confidence 345566789999999999995 44442 234467899999987554 44432112233333 446666653 2222
Q ss_pred CchhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEeec-CCcCc-E-EEecCCCHHHHHHHHHHHHhc
Q 009035 269 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP-F-IVCEDADVDKAAELAHYALFF 341 (546)
Q Consensus 269 ~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lel-gG~~p-~-iV~~dADl~~a~~~i~~~~f~ 341 (546)
.|...-.+|. +-|+||+|+=.|..=+.- ++.... + .|-..+ -|.+= + |-+++||.+..+..++.-+=+
T Consensus 180 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-g--~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 254 (426)
T PRK12447 180 GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAE--AKRQLF-G--RVGIDLFAGPTETLVIADDTADPELVATDLLGQAEH 254 (426)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhc-C--ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 2444334443 357899999888865432 111111 1 121111 23333 3 334458999887766655544
Q ss_pred cCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC
Q 009035 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (546)
Q Consensus 342 ~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (546)
... .+.++|..+ +++.++..+.+.++--. + .. .+.++.++++
T Consensus 255 d~~-----a~~iLvT~s--~~la~~V~~~v~~ql~~-----------l-~r------~~i~~~sl~~------------- 296 (426)
T PRK12447 255 GPN-----SPAVLITTS--RKLAEEVLAEIERLLAI-----------L-PT------ADVASAAWRD------------- 296 (426)
T ss_pred CCC-----CceEEEECC--HHHHHHHHHHHHHHHHh-----------C-CH------HHHHHHHHHh-------------
Confidence 332 334555444 34444443333321000 0 00 0122222211
Q ss_pred CCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEcC
Q 009035 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 500 (546)
Q Consensus 422 ~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN~ 500 (546)
+| .|+-++|++||++++|..-.= ..-|.++|. ..+..++ ++|.|++..
T Consensus 297 ------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG~ 345 (426)
T PRK12447 297 ------------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYGALFLGE 345 (426)
T ss_pred ------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceeccCC
Confidence 11 345679999999999986443 456888886 4666677 599999987
Q ss_pred CCC--CCCCC--CccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 501 FDV--FDAAI--PFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 501 ~~~--~~~~~--pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
++. +..++ |=.=...+|.+|..+.-+++.|++..++.
T Consensus 346 ~sp~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 346 RTNVAYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred CCchhhhhcccCCCcccCCCcceeecCCCcHHHhccceeEE
Confidence 643 11111 11113356778888888899998887664
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.58 Score=49.51 Aligned_cols=267 Identities=20% Similarity=0.256 Sum_probs=147.2
Q ss_pred CCCceeeeeccceeEEEEcCc---cchHHHHHHHHHHHhhcCCeEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 009035 193 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVl--kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~ 267 (546)
.|......+.|+--|++..|. -||-..+ ...+||-.+|..=|+ -|+.........| -..+.+|..+ |..
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvL-M~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL-~AA~~~Gv~e----Iy~ 183 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPSSVL-MNAIPAKVAGVKEIVMVTPPPDGEINPAIL-AAAALAGVDE----VYK 183 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchHHHH-HhhcchhhcCCCeEEEEeCCCCCCCCHHHH-HHHHHcCCCe----eec
Confidence 345566789999999999996 3554444 457899999986554 4443111222223 3446666653 222
Q ss_pred CCchhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCc-EEE-ecCCCHHHHHHHHHHHHhc
Q 009035 268 GYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP-FIV-CEDADVDKAAELAHYALFF 341 (546)
Q Consensus 268 g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p-~iV-~~dADl~~a~~~i~~~~f~ 341 (546)
-.|...-.+|. +-|+||+|+=.|..=+.. ++..-. +..-+=+ +.|.+= +|| +++||.+..+..++.-+=+
T Consensus 184 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-g~V~ID~-~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 259 (425)
T PRK00877 184 VGGAQAIAALAYGTESIPKVDKIVGPGNIYVTA--AKRLVF-GVVGIDM-IAGPSEILVIADETADPDFVAADLLSQAEH 259 (425)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHHc-CCcCcCC-CCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 22444444444 357899999888865432 111111 1111111 123333 333 4458999887766655544
Q ss_pred cCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC
Q 009035 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (546)
Q Consensus 342 ~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (546)
... .+.++|..+ +++.++..+.+.+..-- + .| .+.+++++++
T Consensus 260 d~~-----a~aiLvT~s--~~la~~V~~~v~~ql~~-----------l------~r-~~ia~~sl~~------------- 301 (425)
T PRK00877 260 DPD-----AQSILVTTS--EELAEAVAAEVERQLAT-----------L------PR-AEIARASLEG------------- 301 (425)
T ss_pred CCC-----CcEEEEECC--HHHHHHHHHHHHHHHHh-----------C------Ch-HHHHHHHHHh-------------
Confidence 332 334555444 34444443333221000 0 00 0112222111
Q ss_pred CCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEcC
Q 009035 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 500 (546)
Q Consensus 422 ~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN~ 500 (546)
+| .|+.++|+|||++++|..-.= ..-|.++|.. .+..++ ++|.|++..
T Consensus 302 ------------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFlG~ 350 (425)
T PRK00877 302 ------------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAGAIFLGP 350 (425)
T ss_pred ------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccCC
Confidence 11 345679999999999986443 5568888864 566666 699999987
Q ss_pred CCC--CCCCC--CccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 501 FDV--FDAAI--PFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 501 ~~~--~~~~~--pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
++. +..++ |=.=...+|..|+.+.-+++.|++..++..
T Consensus 351 ~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~~~ 392 (425)
T PRK00877 351 YTPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSVIE 392 (425)
T ss_pred CCchhhhhcccCCCcccCCCcceeecCCccHHHhccceeEEE
Confidence 643 11111 111133567788888889999998877643
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.61 Score=49.10 Aligned_cols=266 Identities=14% Similarity=0.139 Sum_probs=145.8
Q ss_pred CCCceeeeeccceeEEEEcCc-cchHH-HHHHHHHHHhhcCCeEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 009035 193 GPYHVQTLHEPIGVAGQIIPW-NFPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g 268 (546)
.+......+.|+--|++..|. .+|+. +++...+||-.+|+.=|+ -|+.........|+ ..+.+|..+ |..-
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e----Iy~i 174 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLA-ACYITQVNQ----VFQV 174 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-HHHHcCCCe----eecc
Confidence 345566789999999999995 44443 234457899999987654 34332112222232 445666653 2221
Q ss_pred CchhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCc--EEEecCCCHHHHHHHHHHHHhcc
Q 009035 269 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP--FIVCEDADVDKAAELAHYALFFN 342 (546)
Q Consensus 269 ~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p--~iV~~dADl~~a~~~i~~~~f~~ 342 (546)
.|...-.+|. +-|+||+|+=.|..=+.. ++.... +..-+=+ .-|.+= +|-+++||.+..+..++.-+=+.
T Consensus 175 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-g~V~ID~-~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd 250 (416)
T PRK13770 175 GGAQSIAALTYGTETIPKVDKIVGPGNQFVAY--AKKYLF-GQVGIDQ-IAGPTEIALIIDETADLDAIVYDVFAQAEHD 250 (416)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhc-CCcCcCC-CCCCceeEEEecCCCCHHHHHHHHHHHhccC
Confidence 2444334443 357899999888765432 111111 1111111 123332 33355689998877666554333
Q ss_pred CCCcccCCCeEEEccc--chHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC
Q 009035 343 QGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (546)
Q Consensus 343 ~GQ~C~a~~~v~V~~~--v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 420 (546)
.. .+.++|..+ +.++..+.+.+.+..+. . .+.++.++++
T Consensus 251 ~~-----a~~iLvT~s~~la~~V~~ev~~ql~~lp---------------r-------~~i~~~al~~------------ 291 (416)
T PRK13770 251 EL-----ARTYVISEDAQVLKDLESRIAKALPNVD---------------R-------YDIVSKSIAN------------ 291 (416)
T ss_pred CC-----CcEEEEeCCHHHHHHHHHHHHHHHHhCC---------------h-------HHHHHHHHHh------------
Confidence 32 334555444 33444444433333211 0 0112222211
Q ss_pred CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEc
Q 009035 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWIN 499 (546)
Q Consensus 421 ~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN 499 (546)
+| .|+-++|+|||++++|..-.= ..-|.++|. ..+..++ ++|.|++.
T Consensus 292 -------------------------~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG 339 (416)
T PRK13770 292 -------------------------QH---YLIHASNFDEACHVMNTIAPE-HASIQTVNP---QPYIEKVKYVGALFIG 339 (416)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhCCEeceeccC
Confidence 11 345679999999999986544 456888886 4666777 58999998
Q ss_pred CCCC--CCCCC--CccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 500 CFDV--FDAAI--PFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 500 ~~~~--~~~~~--pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
.++. +..+. |=.=...+|..|..+.-+++.|++..++..
T Consensus 340 ~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 382 (416)
T PRK13770 340 HYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVIH 382 (416)
T ss_pred CCCchhhhccccCCCCcCCCCcceeccCCCcHHHeecceeeEE
Confidence 7643 11110 111133456777777788888988877643
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.69 Score=48.43 Aligned_cols=264 Identities=19% Similarity=0.192 Sum_probs=147.7
Q ss_pred CCCceeeeeccceeEEEEcCc-c--chHHHHHHHHHHHhhcCCeEEE--ecCCC-ChHHHHHHHHHHHHcCCCCCcEEEE
Q 009035 193 GPYHVQTLHEPIGVAGQIIPW-N--FPLLMFAWKVGPALACGNTIVL--KTAEQ-TPLSALYVSKLLHEAGLPPGVLNIV 266 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~-n--~P~~~~~~~l~~ALaaGN~VVl--kps~~-~p~t~~~l~~~l~~aGlP~gvv~vv 266 (546)
.+......+.|+--|++..|. . ||-.. +...+||-.+|+.=|+ -|+.. .......|+ ..+.+|..+ +.
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStv-LM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e----Iy 151 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTV-LMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE----VY 151 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHH-HHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe----eh
Confidence 455667899999999999996 3 44444 4457799999987554 44322 112223333 446667664 22
Q ss_pred eCCchhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEeec-CCcCc--EEEecCCCHHHHHHHHHHHH
Q 009035 267 SGYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYAL 339 (546)
Q Consensus 267 ~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lel-gG~~p--~iV~~dADl~~a~~~i~~~~ 339 (546)
.-.|...-.+|. +-|+||+|+=.|..=+.. ++..-. + .|-..+ -|.+= +|-+++||.+..+..++.-+
T Consensus 152 ~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~--AK~~v~-g--~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQA 226 (393)
T TIGR00069 152 KVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTA--AKKLVF-G--DVGIDMPAGPSEVLVIADETANPEFVAADLLSQA 226 (393)
T ss_pred hcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhc-C--ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 222444434443 357899999888865432 111111 1 121111 23333 33345589998777666554
Q ss_pred hccCCCcccCCCeEEEccc--chHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCc
Q 009035 340 FFNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417 (546)
Q Consensus 340 f~~~GQ~C~a~~~v~V~~~--v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~ 417 (546)
=+... .+.++|..+ +.++..+.+.+.+..+. + .+.+++++++
T Consensus 227 EHd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~al~~--------- 270 (393)
T TIGR00069 227 EHDPD-----AQAILVTTSEELAEAVQEEIERQLATLP----------------R------REIARKSLED--------- 270 (393)
T ss_pred ccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHh---------
Confidence 33322 334555444 33444444444333211 0 0122222211
Q ss_pred ccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEE
Q 009035 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSV 496 (546)
Q Consensus 418 ~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V 496 (546)
+| .|+.++|++||++++|..-.= ..-|.++|. ..+..++ ++|.|
T Consensus 271 ----------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p---~~~l~~I~nAGai 315 (393)
T TIGR00069 271 ----------------------------NG---AIILVDDLEEAIEISNDYAPE-HLELQTKNP---EELLPKIRNAGSI 315 (393)
T ss_pred ----------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhcCcccee
Confidence 11 345679999999999986443 456788886 4666666 59999
Q ss_pred EEcCCCC--CCCCC--CccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 497 WINCFDV--FDAAI--PFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 497 ~iN~~~~--~~~~~--pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
++..++. +..++ |=.=...+|.+|+.+.-+++.|++..++..
T Consensus 316 FlG~~tp~a~GDY~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~~ 361 (393)
T TIGR00069 316 FLGPYTPEAAGDYAAGPNHVLPTGGTARFYSGLSVLDFLKRITVQR 361 (393)
T ss_pred ccCCCCchhhhhccCCCCcccCCCcceeecCCccHHHhccceeEEE
Confidence 9987653 11111 111133556788888888999998877653
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0064 Score=72.96 Aligned_cols=104 Identities=13% Similarity=0.047 Sum_probs=78.3
Q ss_pred ccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 009035 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (546)
Q Consensus 188 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~ 267 (546)
.+|.+.|+.+.....|+|+|+++.+-. ...+.+++.+|++||.+|+..++. ....+ +++|+.+.+.+.
T Consensus 1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~------~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1172 LLPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRALV------AALPAAVQARIQ 1239 (1318)
T ss_pred cCCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHHHH------HhccHHHHhHhh
Confidence 467788999999999999999998743 257889999999999998864433 22222 469998888763
Q ss_pred CCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCC
Q 009035 268 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (546)
Q Consensus 268 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 307 (546)
-. . ........++.|.|.|..+..+.+.+..+++.+
T Consensus 1240 ~~---~-~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809 1240 LA---K-DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred hc---c-ccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence 21 1 122233569999999999999999999888653
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=1.2 Score=46.18 Aligned_cols=255 Identities=15% Similarity=0.137 Sum_probs=141.4
Q ss_pred CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchh
Q 009035 193 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPT 272 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~ 272 (546)
.+......+.|+--|++..|.-||-. .+....||-.+|+.=|+--+|-.......|+ ..+.+|..+ +..-.|..
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pSt-vLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-aa~~~Gv~e----Iy~vGGAQ 156 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVST-LVMLAVPARAAGVEEIYVVTPPRGVTGELLA-VAKELGVKG----VLAIGGPH 156 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHHH-HHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-HHHHcCCCe----eecccCHH
Confidence 45556778999999999999655543 4456789999998765433221112223333 456666653 22222444
Q ss_pred HHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCe
Q 009035 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352 (546)
Q Consensus 273 ~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~ 352 (546)
.-.++...-+||+|+=.|..=+..+ +..-. +..-+=+--|-.--+||.+++|.+..+..++.-+=+.. . .+.
T Consensus 157 AIAa~a~gt~VDkIvGPGN~yV~~A--K~~v~-g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~----~-a~~ 228 (368)
T PRK13769 157 GLAYAVFHMGVDMVAGPGGLYVQAA--KYVLS-QYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP----T-SFA 228 (368)
T ss_pred HHHHHhcCCCcCEEECCCcHHHHHH--HHHHh-CCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC----C-CcE
Confidence 4445555458999998888654321 11111 11111112233444566666888777665554443322 2 344
Q ss_pred EEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeec
Q 009035 353 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT 432 (546)
Q Consensus 353 v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~ 432 (546)
++|..+ .++.++..+.+++. +.+ . + |.
T Consensus 229 iLvT~s--~~la~~V~~~v~~~---------------------------~~~-----~-------~----~~-------- 255 (368)
T PRK13769 229 YLLSTD--AELLKAAEEIYRRE---------------------------RTS-----S-------M----GP-------- 255 (368)
T ss_pred EEEECC--HHHHHHHHHHHHHH---------------------------HHh-----c-------C----CC--------
Confidence 555554 45555554444320 000 0 0 00
Q ss_pred cCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEcCCCCCCCCC--C
Q 009035 433 GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVFDAAI--P 509 (546)
Q Consensus 433 ~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN~~~~~~~~~--p 509 (546)
..|+.++|++||++++|..-.= ...|.+. +.+..++ ++|.|+++.+..+..+. |
T Consensus 256 -----------------~~iivv~~leeai~~~N~~APE-HLel~~~-----~~~~~~i~nAGsiFl~~p~a~GDY~aGp 312 (368)
T PRK13769 256 -----------------LEVRKVAGVEEAVRFIDEIAPE-HLEVWGR-----REVAYRVRNVGAVSVNMPSPYLDYVAGI 312 (368)
T ss_pred -----------------CeEEEECCHHHHHHHHHhhChH-heEeeCc-----HHHHhhCCccCChhcCCchhhhccccCC
Confidence 2567889999999999986443 3333442 2255566 59999996532222111 1
Q ss_pred ccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 510 FGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 510 fgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
=.=...+|.+|..|.-++..|++..++.
T Consensus 313 NHvLPT~G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 313 SHVLPTGGTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred CCcCCCCcceeccCCCcHHHcccceeEE
Confidence 1113345677888888888888877654
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=96.34 E-value=1.7 Score=45.58 Aligned_cols=269 Identities=17% Similarity=0.158 Sum_probs=144.1
Q ss_pred CCCceeeeeccceeEEEEcCcc-chHH-HHHHHHHHHhhcCCeEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 009035 193 GPYHVQTLHEPIGVAGQIIPWN-FPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~n-~P~~-~~~~~l~~ALaaGN~VVl--kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g 268 (546)
.+......+.|+--|++..|.- +|+. +.+...+||-.+|+.=|+ -|+...-.....+.-..+.+|..+ +..-
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e----iy~v 157 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE----IYKV 157 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE----Eecc
Confidence 4566778999999999999963 4443 234457899999987554 444321111122222345556553 2222
Q ss_pred CchhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCc--EEEecCCCHHHHHHHHHHHHhcc
Q 009035 269 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP--FIVCEDADVDKAAELAHYALFFN 342 (546)
Q Consensus 269 ~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p--~iV~~dADl~~a~~~i~~~~f~~ 342 (546)
.|...-.+|. +.|.||+|+=.|..=+..+ +..-. +..-+=+ .-|.+= +|.++.||.+..+..++.-+=+.
T Consensus 158 GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v~-g~V~ID~-~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~ 233 (390)
T cd06572 158 GGAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLVS-GDVGIDM-PAGPSEVLVIADETANPEFVAADLLSQAEHD 233 (390)
T ss_pred CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHhc-CCcCccC-CCCCceEEEEeCCCCCHHHHHHHHHhhhccC
Confidence 2444444444 3688999998887654321 11111 1111111 123332 33345589988776666544333
Q ss_pred CCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCC
Q 009035 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (546)
Q Consensus 343 ~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (546)
. ..+.++|..+ .++.++..+.+.+..-.-| .. +.++....+
T Consensus 234 ~-----~a~aiLvT~s--~~la~~V~~~v~~ql~~l~-----------r~-------~~~~~~~~~-------------- 274 (390)
T cd06572 234 P-----DSQAILVTTS--EELAEAVEEEVERQLAELP-----------RR-------EIAAKSLLD-------------- 274 (390)
T ss_pred C-----CCeEEEEECC--HHHHHHHHHHHHHHHHhCC-----------cH-------HHHHHHHHh--------------
Confidence 2 1334555554 3444444333332100000 00 011111110
Q ss_pred CceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEcCC
Q 009035 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF 501 (546)
Q Consensus 423 g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN~~ 501 (546)
+ -.|+.++|++|+++++|..-.= ..-|.++|.. .+..++ ++|.|++..+
T Consensus 275 -----------------------~---g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGsiFlG~~ 324 (390)
T cd06572 275 -----------------------Y---GAIILVDDLEEAIELANEYAPE-HLELQTEDPE---ELLEKIRNAGSIFLGPY 324 (390)
T ss_pred -----------------------C---CEEEEECCHHHHHHHHHhhchh-hheeHhcCHH---HHHhhCccceEEeecCC
Confidence 1 1355679999999999986443 5677888865 466666 6999999986
Q ss_pred CCC--CCC--CCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 502 DVF--DAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 502 ~~~--~~~--~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
+.. ..+ -|=+=...+|..|..+.-+++.|++..++..
T Consensus 325 tp~a~GDY~aGpNHvLPT~G~Ar~~sgL~v~~F~K~~s~~~ 365 (390)
T cd06572 325 TPEALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKRITVQE 365 (390)
T ss_pred CchhhhccccCCCCccCCCcceeecCCCCHHHheecceeEE
Confidence 431 111 0111123456677777788888988877643
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.32 E-value=1.9 Score=45.79 Aligned_cols=266 Identities=18% Similarity=0.184 Sum_probs=146.1
Q ss_pred CCCceeeeeccceeEEEEcCc---cchHHHHHHHHHHHhhcCCeEEE--ecCCC-ChHHHHHHHHHHHHcCCCCCcEEEE
Q 009035 193 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQ-TPLSALYVSKLLHEAGLPPGVLNIV 266 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVl--kps~~-~p~t~~~l~~~l~~aGlP~gvv~vv 266 (546)
.|......+.|+.-|++..|. -||-.. +...+||-.+|..=|+ -|+.. .......|+ ..+.+|+.+ |.
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e----Iy 183 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTA-LMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH----IL 183 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHH-HHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe----ee
Confidence 345567889999999999996 344444 4457899999986544 44422 112233333 456677664 22
Q ss_pred eCCchhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcc--eEeec-CCcCcEE--EecCCCHHHHHHHHHH
Q 009035 267 SGYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP--VTLEL-GGKSPFI--VCEDADVDKAAELAHY 337 (546)
Q Consensus 267 ~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~p--v~lel-gG~~p~i--V~~dADl~~a~~~i~~ 337 (546)
.-.|...-.+|. +-|+||+|+=.|..=+.. ++.... + .+ |-..+ -|.+=++ -+++||.+.++..++.
T Consensus 184 ~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-G-~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLa 259 (431)
T PLN02926 184 KAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTA--AKMILQ-N-SEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLS 259 (431)
T ss_pred ccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHH--HHHHhh-C-CCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 222444444443 357899999888865432 111111 1 10 21111 2333333 3445899988776665
Q ss_pred HHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCc
Q 009035 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417 (546)
Q Consensus 338 ~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~ 417 (546)
-+=+... .+.++|..+ .++.++..+.+.++-- + + .+ .+.++.+.+
T Consensus 260 QAEHdp~-----a~aiLvT~s--~~la~~V~~~v~~ql~--------~---l-~r------~~i~~~sl~---------- 304 (431)
T PLN02926 260 QAEHGPD-----SQVVLVAVG--DVDLDAIEEEVEKQCQ--------S---L-PR------GEIASKALG---------- 304 (431)
T ss_pred HhccCCC-----CcEEEEECC--HHHHHHHHHHHHHHHH--------h---C-Ch------HHHHHHHHH----------
Confidence 5544332 334555554 3444444333322100 0 0 00 011111111
Q ss_pred ccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEE
Q 009035 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSV 496 (546)
Q Consensus 418 ~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V 496 (546)
- -.|+.++|++||++++|..-.= ..-|.++|. +.+..++ ++|.|
T Consensus 305 ------------------------------~-g~iivv~~l~ea~~~~N~~APE-HLei~~~~~---~~~l~~i~nAGai 349 (431)
T PLN02926 305 ------------------------------H-SFIVVARDMAEAISFSNLYAPE-HLIVNVEDA---ESWLDKIDNAGSV 349 (431)
T ss_pred ------------------------------C-CEEEEECCHHHHHHHHHhhChH-hheehhcCH---HHHHhhcCcccee
Confidence 1 1456789999999999986443 456888886 4666666 59999
Q ss_pred EEcCCCC--CCCCC--CccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 497 WINCFDV--FDAAI--PFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 497 ~iN~~~~--~~~~~--pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
++..++. +..+. |=.=...+|.+|..|.-++..|++..++..
T Consensus 350 FlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 395 (431)
T PLN02926 350 FLGRWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 395 (431)
T ss_pred ccCCCCchhhhccccCcCcccCCCcceeecCCCcHHHhcceeeEEE
Confidence 9987543 11111 111133456778888888999998877643
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=89.20 E-value=0.11 Score=55.25 Aligned_cols=113 Identities=13% Similarity=0.093 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEE---EEEeCCHHHHHHHHH
Q 009035 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS---ILKYKDLDEVIQRSN 466 (546)
Q Consensus 390 ~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~---v~~~~~~~eai~~~N 466 (546)
.+..++.+++..+.+.++++..++...+.. +.|.++.++...+++...+.++ .|++..- .....+..+.+.+.+
T Consensus 79 ~~~~~R~~~L~~~Adlie~~~~~lA~~E~~-d~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~ 155 (501)
T KOG2450|consen 79 RDAAERGRLLRKLADLIEQDADVLAALEVL-DNGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTR 155 (501)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHhhhccc-ccCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEec
Confidence 356788999999999999988888777643 4678888888778877766665 5555442 234456667888899
Q ss_pred cCCCCceEEEEcCC---HHHHHHHHHHhceeEEEEcCCCCCC
Q 009035 467 ASQYGLAAGVFTHN---LDTANTLMRALRVGSVWINCFDVFD 505 (546)
Q Consensus 467 ~~~~gL~a~v~t~d---~~~a~~~~~~l~~g~V~iN~~~~~~ 505 (546)
..+.|-.+.|--.| .-.+.+++-+|.+|+++||-+....
T Consensus 156 ~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~t 197 (501)
T KOG2450|consen 156 REPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQT 197 (501)
T ss_pred CCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCC
Confidence 99999655555555 4677889999999999999875443
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.45 E-value=7.1 Score=42.43 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=73.8
Q ss_pred cCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 009035 189 APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (546)
Q Consensus 189 ~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g 268 (546)
++.+.+..++....|.|-|+++.+ +....+.+++.+|++||.+++-+... ++.++. .+|.++-..+.-
T Consensus 629 LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~-------~aa~~~--~l~~~v~~~~~~ 696 (769)
T COG4230 629 LPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSG-------LAALLK--DLPSAVASRIQV 696 (769)
T ss_pred cCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcch-------HHHHHH--hchhhhhhheee
Confidence 456678899999999999999854 56778888999999999999865433 222222 256554333322
Q ss_pred CchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecC
Q 009035 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (546)
Q Consensus 269 ~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelg 315 (546)
.++. ...-.++.+.|.|..+..+.+.+..+.+ ..|++.-.+
T Consensus 697 ~~~~-----~~~~~~~~vl~~gd~~~~r~~~~~iA~~-~Gpiv~~~~ 737 (769)
T COG4230 697 AKDW-----TADIPFDAVLFHGDSDRLRALCEAIAAR-DGPIVSVQG 737 (769)
T ss_pred ccch-----hhccceeeEEecCCHHHHHHHHHHHhcC-CCCeEEeec
Confidence 1221 2223578999999999999999877763 345554443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 546 | ||||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-170 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-169 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-169 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-168 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-168 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-168 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-168 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-167 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-166 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-166 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-164 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-159 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-152 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-120 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-119 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-119 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-119 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-118 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-118 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-111 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 1e-111 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-110 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-110 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-110 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-106 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 1e-99 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 2e-95 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 6e-94 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 7e-94 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-93 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-93 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 3e-93 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 2e-90 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 5e-89 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 4e-88 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-87 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-87 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-83 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 2e-82 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 3e-82 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 4e-81 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-79 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 7e-79 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-78 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 3e-78 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 2e-74 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 7e-74 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 7e-72 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 3e-71 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 5e-70 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-66 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-66 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-63 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 7e-62 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 2e-59 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 2e-58 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 4e-58 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 2e-57 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-57 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-57 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 5e-56 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 6e-56 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-55 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 3e-55 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 7e-55 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-51 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 8e-51 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-50 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 9e-50 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 1e-49 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-49 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 1e-48 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 3e-46 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 3e-44 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-42 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 2e-41 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 8e-37 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-34 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 3e-34 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 7e-34 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-32 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-31 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 2e-31 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-31 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-31 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 1e-18 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 1e-18 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 1e-18 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 2e-18 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 2e-17 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 4e-13 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 6e-08 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 4e-05 |
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 890 bits (2303), Expect = 0.0
Identities = 289/495 (58%), Positives = 357/495 (72%), Gaps = 4/495 (0%)
Query: 50 AAAAEDPITPPVK---VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
+AAA + P + V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV+
Sbjct: 1 SAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVD 60
Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+AV AAR AF G PW RM A R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 61 KAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLV 120
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+G
Sbjct: 121 DLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK
Sbjct: 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDK 240
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQ
Sbjct: 241 VAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 300
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G
Sbjct: 301 CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTG 360
Query: 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+
Sbjct: 361 KQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRA 420
Query: 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 525
N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y
Sbjct: 421 NNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEY 480
Query: 526 SLSNYLQVKAVVTAL 540
L Y +VK V +
Sbjct: 481 GLQAYTEVKTVTVKV 495
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 890 bits (2302), Expect = 0.0
Identities = 271/499 (54%), Positives = 351/499 (70%), Gaps = 3/499 (0%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
SS+A ++ YT++ IN ++ S SGK FP +P T + + V EG+ EDV+
Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61
Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+AV AAR+AF G PW M A ER +++ + ADL+ER +A +E + GK F +
Sbjct: 62 KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ + RY AGWADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+G
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PAL+CGNT+V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK
Sbjct: 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDK 241
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
+AFTGST GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQ
Sbjct: 242 VAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
CC A SR FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG
Sbjct: 302 CCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESG 361
Query: 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465
GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+
Sbjct: 362 KKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRA 421
Query: 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 525
N + YGL+AG+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y
Sbjct: 422 NNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEY 481
Query: 526 SLSNYLQVKAVVTAL--KN 542
Y +VK V + KN
Sbjct: 482 GFHEYTEVKTVTIKISQKN 500
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 875 bits (2264), Expect = 0.0
Identities = 205/502 (40%), Positives = 315/502 (62%), Gaps = 9/502 (1%)
Query: 44 STASSAAAAAEDPITPPVKVDY---TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
+ K+ QL I G+FVD+ KT+ T++P G VI V+
Sbjct: 12 GEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLA 71
Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
+ DV++AV+AA++AF+ G W ++ A +R +++ R AD++E+H +E+A +E D G +
Sbjct: 72 QVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYT 131
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP----YHVQTLHEPIGVAGQIIPWNFP 216
+ +T V M+ + FRY+AGW DKIQG T P + T EP+GV G +IPWN+P
Sbjct: 132 LALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYP 191
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L+M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G
Sbjct: 192 LMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQR 251
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
L+ H +V K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++
Sbjct: 252 LSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGM 311
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396
++FFN+G+ C A R FV ES+++QFV+K K +G+P + GPQ
Sbjct: 312 SSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLR 371
Query: 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
K+++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 372 KLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431
Query: 457 --DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 514
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+K
Sbjct: 432 DGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFK 491
Query: 515 QSGQGREKGSYSLSNYLQVKAV 536
QSG G++ G +L+ YL++K V
Sbjct: 492 QSGFGKDLGEAALNEYLRIKTV 513
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 860 bits (2225), Expect = 0.0
Identities = 185/506 (36%), Positives = 279/506 (55%), Gaps = 7/506 (1%)
Query: 45 TASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAED 104
+ + +K + I+G++V+SA+ T ++P +VI V+EG ED
Sbjct: 12 DLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKED 71
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
RA+ AAR+AF+ G W + TA R K + AD ++ H + +A LET D GK E+ +
Sbjct: 72 AERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEE-SY 130
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223
++ +F Y+AG ADK G + P + + EP+GV QI PWN+PLL +WK
Sbjct: 131 ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190
Query: 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
+ PALA G ++V+K +E TPL+ + V +L+ E G P G +N++ G G G ++ H EV
Sbjct: 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
D ++FTG TGK +++ AA +N+ + LELGGK+P I+ +DAD + A + A +F+
Sbjct: 251 DLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHA 309
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
GQ C AGSR V S+ D+F + K +G+ F + GP I +E KI Y+
Sbjct: 310 GQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMD 369
Query: 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459
GA + GG+R G + +PTV T M I ++E+FGPV ++ ++
Sbjct: 370 VAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQ 429
Query: 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 519
E IQ +N S YGLA VF+ ++ A + L++G+VWIN F + A P+GGYKQSG G
Sbjct: 430 EAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIG 489
Query: 520 REKGSYSLSNYLQVKAVVTALKNPAW 545
RE G L YL K ++T
Sbjct: 490 RELGKEGLEEYLVSKHILTNTNPQLV 515
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 859 bits (2221), Expect = 0.0
Identities = 211/506 (41%), Positives = 298/506 (58%), Gaps = 7/506 (1%)
Query: 46 ASSAAAAAEDPITPPVKVD-YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAE 103
+ A D P +++ Q+L++G+ VD+ASG T + P G+V+ E A+
Sbjct: 2 VMLSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASAD 61
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV +AV+AARKAFD GPWPRM+ ERS+++ + ADL+ +E+A +E+ + GKP Q A
Sbjct: 62 DVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQ-A 120
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
+ E+ L+ Y AG A ++G T G L EP+GV G I PWNFP ++ +
Sbjct: 121 RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
+V A+ G T+VLK +E T +++ +++L EAG+P GV N+V+GYG AG LA
Sbjct: 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPN 240
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
VD +AFTGS G + ++AA+ +K V LELGGK P IV DAD+D AA+ Y ++ N
Sbjct: 241 VDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHN 299
Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402
GQCC +GSR V E + D +E+ ++ K GDP + G I EK+ Y+
Sbjct: 300 AGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYV 359
Query: 403 RSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461
+G+ GA+L GGER+G G Y PTVF GV DM IA++EIFGPV S L +K DE
Sbjct: 360 TAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419
Query: 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 521
+ +NA+++GL+A V++ NL+TA +R +R G WIN +P GGYK+SG GRE
Sbjct: 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRE 479
Query: 522 KGSYSLSNYLQVKAVVTALKNPA-WL 546
G Y Y Q K V L PA W
Sbjct: 480 LGRYGFDEYSQFKGVHVTLGRPAPWF 505
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 854 bits (2209), Expect = 0.0
Identities = 190/494 (38%), Positives = 277/494 (56%), Gaps = 11/494 (2%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE-- 118
+ + QL ING + K P ++P T ++I + EDV+ AV+AA+ A
Sbjct: 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62
Query: 119 -GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W + R++ + A + E+A LE+ D GKP ++ A ++ F YY
Sbjct: 63 GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE-AAWDIDDVAGCFEYY 121
Query: 178 AGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
A A+K+ + L EPIGV G I PWN+P+LM WKV PALA G
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181
Query: 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
+LK +E L+ L + ++ E GLPPGVLNI++G GP AGA LA+H +VDK+AFTGS+
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353
TG ++ AA+ +KPV+LELGGKSP +V ED D+DKAAE A + F+ GQ C A SR
Sbjct: 242 TGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 413
+HES+ +F+ + + DP + G + GP + Q+EKILK++ + GA +
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 414 TGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 471
TGG R KG++I+PT+ T V +M I ++E+FGPV + + +E I +N + YG
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYG 420
Query: 472 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 531
L A V +++L+ + +A + G VW+NC P+GG K+SG GRE G + L NYL
Sbjct: 421 LGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYL 480
Query: 532 QVKAVVTALKNPAW 545
VK V + W
Sbjct: 481 SVKQVTQYISEEPW 494
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 843 bits (2181), Expect = 0.0
Identities = 200/510 (39%), Positives = 294/510 (57%), Gaps = 14/510 (2%)
Query: 44 STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
+ + + + +K I G+FV S SG+TFP+LDP T +V+ A G
Sbjct: 5 DRVAGISWETIEEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGER 64
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
+V+RA AA +AF W R A ER + +LR A+L+E+H DE+A +E D G+
Sbjct: 65 EVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRI-V 121
Query: 164 QTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
+ +V F +YA +A+ ++ T P D + T+ P G G I PWN PL++ W
Sbjct: 122 RAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTW 181
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
++ PALA GNT+VLK AE +P +A ++++L EA LPPGV N+V G+G AGAAL +H
Sbjct: 182 RIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPL 241
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
V L TG T TGKIV++ AA +LK ++ ELGGKSP +V DAD+++A + + +F
Sbjct: 242 VPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSF 300
Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402
G+ C A SR V E +++ FV K A VG P + GP I E +++L Y+
Sbjct: 301 NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYV 360
Query: 403 RSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454
+G GA+L GGER ++G Y+ PTVF G ++ M IA++EIFGPV +
Sbjct: 361 EAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIP 419
Query: 455 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 514
+KD +E ++++N ++YGLAA VFT +L+ A+ L L G V++N +V PFGG K
Sbjct: 420 FKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVK 479
Query: 515 QSGQGREKGSYSLSNYLQVKAVVTALKNPA 544
SG RE G+Y+L Y +K + L+ P
Sbjct: 480 GSGDRREGGTYALDFYTDLKTIALPLRPPH 509
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 840 bits (2173), Expect = 0.0
Identities = 182/501 (36%), Positives = 276/501 (55%), Gaps = 12/501 (2%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDV 105
+ + T V V G+ + S G T P +P TG V+ + AE+V
Sbjct: 1 AQLVDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEV 60
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
++AV +A+ A+ W +M ERS+++L A ++ D IA LE +NGK A+
Sbjct: 61 DQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTI-TEAEY 117
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ + YYAG A + G G T EP+GV I+ WN+P ++ AWK
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PALACGN +V K + TP++ + ++++ HEAG+P G++N+V G G G+ L H V K
Sbjct: 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAK 236
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
++FTGS TGK V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ
Sbjct: 237 VSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQ 295
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C G+R FV + QF+E+ VVGDP + G I Q +K+L ++
Sbjct: 296 VCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQA 355
Query: 406 VDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459
GA++ GGE L GY++ P V +DDM K+EIFGPV S+L + +
Sbjct: 356 KKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEE 415
Query: 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 519
EV+QR+N + +GLA+GVFT ++ A+ + L G+ +IN + + +PFGGYK SG G
Sbjct: 416 EVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFG 475
Query: 520 REKGSYSLSNYLQVKAVVTAL 540
RE G ++ Y Q+K V+ +
Sbjct: 476 RENGQATVDYYSQLKTVIVEM 496
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 837 bits (2165), Expect = 0.0
Identities = 186/492 (37%), Positives = 274/492 (55%), Gaps = 9/492 (1%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD 117
TP I+G +V+ +G F ++ P TG++I + V RA+++A++A
Sbjct: 7 TPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ- 65
Query: 118 EGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W M+ R +I+ R AD++ ND ++ LET D GKP +++ + F ++
Sbjct: 66 -KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFF 124
Query: 178 AGWA-DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
G A + G P G T P+GV I WN+P + WK PAL GN +V
Sbjct: 125 GGIAPSALNGDYIPLGGD-FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVF 183
Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
K +E TPL AL ++++L EAGLP G+ N++ G T G L +H +V K++ TGS TG+
Sbjct: 184 KPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGR 242
Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
V AA +LK VT+ELGGKSP IV +DAD++ A A F++ GQ C G+R FV
Sbjct: 243 KVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQ 301
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ +F+E ++GDP GP + Q EK+L YI G GA L TGG
Sbjct: 302 KKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361
Query: 417 ---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 473
+ +G Y++PTVF V DDM IA++EIFGPV +L + D DEV+ R+NA+++GLA
Sbjct: 362 GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLA 421
Query: 474 AGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 533
GVFT +L A+ ++ L G++WIN +++ IPFGG KQSG GRE + +L +Y ++
Sbjct: 422 GGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSEL 481
Query: 534 KAVVTALKNPAW 545
K V +
Sbjct: 482 KTVYVSTGKVDA 493
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 820 bits (2121), Expect = 0.0
Identities = 173/493 (35%), Positives = 262/493 (53%), Gaps = 7/493 (1%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+ + +LLING+ V G+ P +P TGDV+ +AE AE V
Sbjct: 4 HHHHHHLESTSLYKKAGLMQHKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQV 62
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+ AV AA AF W + T R++ +L+ AD++E + A LE+ + GKP +
Sbjct: 63 DAAVRAADAAF--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFND 120
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
E+P +FR++AG A + GL A + +P+GV I PWN+PL+M AWK+
Sbjct: 121 EIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
PALA GN +VLK +E TPL+AL +++L + P GV+NI+ G G T G L H +V
Sbjct: 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVR 239
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
++ TGS TG+ ++ A S++K +ELGGK+P IV +DAD++ E ++N G
Sbjct: 240 MVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAG 298
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
Q C A R + + +YD VEK A G P + GP E++ K +
Sbjct: 299 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEE 358
Query: 405 GV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463
G K+ TGGE+ GYY PT+ G D I + E+FGPV S+ + + ++V+
Sbjct: 359 AKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 418
Query: 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 523
+N SQYGLA+ V+T ++ A+ + L+ G W+N + + +P GG K SG G++
Sbjct: 419 WANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMS 478
Query: 524 SYSLSNYLQVKAV 536
Y L +Y V+ V
Sbjct: 479 LYGLEDYTVVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 816 bits (2110), Expect = 0.0
Identities = 166/495 (33%), Positives = 255/495 (51%), Gaps = 7/495 (1%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S+ + TQLLI +F + L+PRTG I +AE ++
Sbjct: 8 SSGVDLGTENLYFQSMMDTQLLIGSRFEA-GTEAEEHILNPRTGAGIIDLAEASHAQIDA 66
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AV AA +AF W + T ERS +L+ AD +E+ DE AALE + GKP E+
Sbjct: 67 AVDAAERAFV--GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL 124
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
P +R++AG + A P + +PIG+ G I PWN+PL+M AWK+ P
Sbjct: 125 PAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
A+ GNT+V K +EQTPL+AL +++L+ + LP GV+N+++G G T G AL +H +V +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMV 243
Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
+ TG TGK VL AAK +K LELGGK+P IV DAD++ ++N GQ
Sbjct: 244 SITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQD 302
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A R + +Y++ V + + GP I Q +++ ++
Sbjct: 303 CTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAA 362
Query: 407 D-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465
D ++ TGG +G++ +PTV G + I + E+FGPV S+ ++ D+ + +
Sbjct: 363 DQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWA 422
Query: 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 525
N S YGLA+ V+T ++ A L+ G WIN + +P GG KQSG G++ Y
Sbjct: 423 NDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVY 482
Query: 526 SLSNYLQVKAVVTAL 540
+L +Y V+ ++
Sbjct: 483 ALEDYTAVRHIMINH 497
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 759 bits (1963), Expect = 0.0
Identities = 175/485 (36%), Positives = 251/485 (51%), Gaps = 5/485 (1%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+Y +L I G++ ++ P TG+ + V A DV+ AV+AAR AFD GPWP
Sbjct: 6 TEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWP 65
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
+ER+ +I +L D L + G+P + Y+AG AD
Sbjct: 66 STPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAAD 125
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
K+ EP+GV G I+ WN PL + K+ PAL G TIVLK A +T
Sbjct: 126 KVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+A ++++ E GLP GVL++V G G G AL S+ ++D FTGS+ G+ V + A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A+ LKP TLELGGKS I+ ED D+ A + ++ N GQ C +R S YD+
Sbjct: 245 AE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 420
V VG P Q GP I +Q ++ YI G++ GA+L GG R
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGL 363
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
G++I+PTVF V + M IA++EIFGPV +I+ Y ++ I +N S YGLA V+T +
Sbjct: 364 DNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTD 423
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
+ + + +R G+ IN + FD PFGGYK SG GRE G + ++ Q K+V+ +
Sbjct: 424 VPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482
Query: 541 KNPAW 545
Sbjct: 483 GYTVA 487
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 735 bits (1899), Expect = 0.0
Identities = 160/493 (32%), Positives = 259/493 (52%), Gaps = 8/493 (1%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
P ++ + ING + D ++ +DP T + ++ G D +
Sbjct: 7 HHMGTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDAD 66
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
+A++AA+KAF W + +ER + + ++ E+ + ++A + + G P + + +
Sbjct: 67 KAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQ 124
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
+ R + + A +G ++ IGV G I PWN+P+ KV P
Sbjct: 125 TATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIP 184
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
AL G T+VLK +E PLSA+ +++L EA LP GV N+++G G G+ L++H +++ +
Sbjct: 185 ALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMI 244
Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
+FTGST GK + + A+ LK V LELGGK I+ DAD+D A + F+N GQ
Sbjct: 245 SFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQS 302
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A +R V +++YD+ ++ A +A K VG + G GP + EQ++KI I+SG+
Sbjct: 303 CNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362
Query: 407 DGGAKLETGGERLGA---KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463
D GA L TGG L +GYY++PTVF VK M I ++EIFGPV S+L + DE +
Sbjct: 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVT 422
Query: 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 523
+N ++YGL + + + + +R G V +N + FGG K SG+ RE G
Sbjct: 423 LANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHE-LPGGSYFGGVKFSGRAREGG 481
Query: 524 SYSLSNYLQVKAV 536
+ + +L KA+
Sbjct: 482 LWGIKEFLDTKAI 494
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 730 bits (1888), Expect = 0.0
Identities = 177/477 (37%), Positives = 269/477 (56%), Gaps = 11/477 (2%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
DYT+ ING++V+S S +T ++P T +VI VA+G DV++AV AA + E +
Sbjct: 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ ER ++ + E D+I T + G P S + M F D
Sbjct: 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDN 123
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
+ D + E IGV+G I PWNFP + K+ A A G+ +VLK +E+TP
Sbjct: 124 YEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
+A+ ++++ + G+P GV N+V+G G G L+ H +V ++FTGS TG +++ AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
K + K V+LELGGKSP+IV +D D+ +AA+ + N GQ C AG+R V + D F
Sbjct: 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-- 421
+ + + VG+P + G Q GP I +QF+++ YI G++ GA+L GG
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL 358
Query: 422 -KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
KGY+ +PT+F V + M IA++EIFGPV S++ Y DLDE IQ +N ++YGLA V +
Sbjct: 359 EKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKD 418
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
+T + + R++ G+V IN +PFGGYKQSG GRE G Y + +L+VK++
Sbjct: 419 KETLHKVARSIEAGTVEINEAG-RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 729 bits (1883), Expect = 0.0
Identities = 162/498 (32%), Positives = 249/498 (50%), Gaps = 17/498 (3%)
Query: 49 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNR 107
A A + + +Y L+ING+ V + + +P R ++ V++ + +
Sbjct: 22 AFEEALGLVEKELGKEY-PLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEK 78
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
A+ +A +AF W + ER+ I+++ A ++ R E +A + GKP+++ A +
Sbjct: 79 AIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKE-ADADT 135
Query: 168 PMTTRLFRYYAGWADKI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
YYA ++ +G + + + P+GV I PWNF L +
Sbjct: 136 AEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVA 195
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
+ GNT+VLK A TP+ A ++L +AGLP GV+N V G G G L H + +
Sbjct: 196 PIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLI 255
Query: 287 AFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
FTGS G + + AA ++LK V +E+GGK +V DAD+D AAE + F
Sbjct: 256 TFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG 315
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
GQ C AGSR +H+ VYD+ +EK ALA VGDP GP ID + FEKI+ Y
Sbjct: 316 FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSY 375
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461
I G G +L TGGE + G++I+PT+ + + +I ++EIFGPV + K D D
Sbjct: 376 IEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHA 434
Query: 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG 519
++ +N ++YGL V T N R VG+++ N C PFGG+K SG
Sbjct: 435 LEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTD 494
Query: 520 -REKGSYSLSNYLQVKAV 536
+ G L+ ++Q K V
Sbjct: 495 SKAGGPDYLALHMQAKTV 512
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 702 bits (1813), Expect = 0.0
Identities = 156/483 (32%), Positives = 243/483 (50%), Gaps = 18/483 (3%)
Query: 65 YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ L I G++VD+ + +L+P +V+ A+ + A+ AA KAF W
Sbjct: 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKD 92
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+RS+++L+ A L+ R E+ A ++ GK + + A +V YYA A +
Sbjct: 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALR 151
Query: 184 IQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
+ ++ + P+G I PWNFP+ +F + +A GNT++ K AE
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAED 211
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
+ V ++ HEAG PPGV+N + G G GA L H + + FTGS G + +
Sbjct: 212 AVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271
Query: 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
A + + K +E GGK+ IV E AD D AAE + + QGQ C A SR +
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ Y+ +E+ A + VG P + GP + +EQ K+L YI G + G +L GG
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGG 389
Query: 417 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 476
+RL +GY+I PTVFT V IA++EIFGPV S+++ KD E ++ +N + YGL GV
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 477 FTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS-YSLSNYLQV 533
++ + R VG+++ N PFGG+K SG + G+ L +L++
Sbjct: 450 YSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509
Query: 534 KAV 536
KAV
Sbjct: 510 KAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 666 bits (1720), Expect = 0.0
Identities = 165/478 (34%), Positives = 248/478 (51%), Gaps = 10/478 (2%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+D T+ LI GQ+V+ S + ++P VI + DV+ A AA+KA W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ--AEWA 67
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
A ERS II R A+LLE H +EI ++G + A E+ + + + A +
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSK-ANLEITLAGNITKESASFPG 126
Query: 183 KIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
++ G +P++ P + GV G I PWNFPL + V PALA GN +V+K A
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 242 TPLSALYVS-KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
TP++ + ++ EAG+P GV++ V+G G G +H ++FTGST G+ V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 301 LAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LA +K V LELGG +PF+V DAD+D AA+ A F +QGQ C + +R V +V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
+D+F+EK GDP G GP I+ Q + + I GA ++ G
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI- 365
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
+G + P VF+ V DM IA++EIFGP+ S+LK D + +NAS +GL+A V++
Sbjct: 366 --EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
++D A + G V IN V D + FGG K SG GR G +++ + + +
Sbjct: 424 DIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 618 bits (1597), Expect = 0.0
Identities = 146/502 (29%), Positives = 215/502 (42%), Gaps = 20/502 (3%)
Query: 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
E I V + G++ S G+ P I V E+V R +
Sbjct: 7 EGVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLF 64
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
K M ER ++ + AD++ER+ D A + + GKP A EV
Sbjct: 65 KRGRW-SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDR 122
Query: 174 FRYYAGWADKIQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228
R KI G P D Y EP+GV I P+N+PL K+ +
Sbjct: 123 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 182
Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
GN +V+K + PL A K L +AG PP + +++ G + + V ++F
Sbjct: 183 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSF 241
Query: 289 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348
TGST G+ + +K +ELGG P IV EDAD+D AA+ ++ GQ C
Sbjct: 242 TGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 298
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 408
A VY + VE+ VGDP + GP I ++++ I V+
Sbjct: 299 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 358
Query: 409 GAKLETGGERLGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465
G ++ GG RLG Y++PT DM++ K E+F PV ++ KDLD+ I+ +
Sbjct: 359 GGRVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELA 416
Query: 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-PFGGYKQSGQGREKGS 524
N YGL A VF ++ +R L VG+++IN PFGG K+SG RE
Sbjct: 417 NGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIG 476
Query: 525 YSLSNYLQVKAVVTALK-NPAW 545
Y++ K +V K W
Sbjct: 477 YAVEAVTAYKTIVFNYKGKGVW 498
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 616 bits (1590), Expect = 0.0
Identities = 164/485 (33%), Positives = 236/485 (48%), Gaps = 17/485 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L NG++V+S +G+ P +G + + E+VN A+ A+ A W
Sbjct: 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI--WKIRP 69
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+ER ++ +ADLLE + I L + KP + A EV T + R+ A A ++
Sbjct: 70 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKS-AIGEVSRTADIIRHTADEALRLN 128
Query: 186 GLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
G T D EP+GV I P+N+P+ + A K+ PAL GNT+V K A
Sbjct: 129 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 188
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
Q LS + + + L +AG P G++ +V+G G G L H +D + FTG TTTG+
Sbjct: 189 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER-- 246
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
++ K+ + PV LELGGK P IV +DAD+ A F GQ C A R FV +SV
Sbjct: 247 -ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV 305
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
DQ V L + VG P P ID + I I ++ GA L +G +R
Sbjct: 306 ADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR- 363
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
+G + PT+ V M +A +E FGPV I++ KD +E I SN S YGL A +FT
Sbjct: 364 --QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTK 421
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
+ D A + + L VG+V IN PF G K+SG G + SL + + + V
Sbjct: 422 DTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481
Query: 539 ALKNP 543
L
Sbjct: 482 NLAEN 486
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 603 bits (1558), Expect = 0.0
Identities = 141/484 (29%), Positives = 245/484 (50%), Gaps = 20/484 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+G++++ + ++P + +VI + E+ A+ A K + +
Sbjct: 2 MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEV--MKNLPIT 56
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
+R I++ A ++ +E+A + D GKP +Q A+ EV + F+ A + + +
Sbjct: 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKEHRDE 115
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P+D + T EP+G+ G I P+NFPL + A K+ PA+A GN IV + + PL +
Sbjct: 116 VIPSDD-RLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174
Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
++K++ A +P GV N+++G G G + + +V+ ++FTGS+ G+++ + A
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
K + LELGG +P IV +DAD++KA F GQ C + V ES+ D+F
Sbjct: 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+E A VG+P GP I E E + K + +D G KL GG+R
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DK 348
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
PT+ V D ++ K E F PV I++ + +E+I +N+++YGL + +FT++++
Sbjct: 349 ALFYPTILE-VDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINK 406
Query: 484 ANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 542
+ L G V IN +F +PFGG K+SG GRE Y++ +K ++ +
Sbjct: 407 SLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAE 466
Query: 543 PAWL 546
+
Sbjct: 467 NLYF 470
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 594 bits (1533), Expect = 0.0
Identities = 139/473 (29%), Positives = 209/473 (44%), Gaps = 9/473 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ I GQ++ G+T +LDP V+ +A V+ AV AAR+AF W R
Sbjct: 6 STHYIAGQWLA-GQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R +++ RFA L+ DE+A + + GKP + + TEV +
Sbjct: 63 LEQRIELLERFAATLKSRADELARVIGEETGKPLWE-SATEVTSMVNKVAISVQAFRERT 121
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G + H+P GV P+NFP + + PAL GN +V K +E TP
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A K +AGLP GVLN+V G G G ALA+H +D L FTGS+ TG ++
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFV 364
K + LE+GG +P +V E AD+D A + F + GQ C R V + + D +
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300
Query: 365 EKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+ A++ VG + G I E +LK + GA+ +
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGA 360
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
+ P + V +E FGP+ +++Y D I+ +NA+QYGLAAG+ + + +
Sbjct: 361 ALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRER 419
Query: 484 ANTLMRALRVGSVWIN-CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535
+ R G V N ++ PFGG SG R Y+ A
Sbjct: 420 FEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVA 472
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 591 bits (1526), Expect = 0.0
Identities = 108/527 (20%), Positives = 184/527 (34%), Gaps = 51/527 (9%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ + + GQ++ +G DP TG + V+ + A
Sbjct: 6 ELLKNHVAGQWIA-GTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--AALRA 62
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+T +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 63 LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGAS 121
Query: 184 IQGLTAPADGP----------YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
+ + A DG L GVA I +NFP K PAL G
Sbjct: 122 LGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 234 IVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292
+++K A T + + +AG LPPG L+I+ G ++ L D ++FTGS
Sbjct: 182 VIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSA 238
Query: 293 TTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADV-----DKAAELAHYALFFNQGQC 346
T + A + ++ + I+C DA D + + GQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A R FV E+ + +E A K VG+P ++ G + EQ+E +L I +
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALR 358
Query: 407 DGGAKLETGGERL-----GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLD 459
+ + P +F + L+ E+FGPV S+ Y+
Sbjct: 359 EEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTT 418
Query: 460 --------EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI--- 508
+ + Q L A +++++ L L ++
Sbjct: 419 DTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTG 478
Query: 509 --------PFGGYKQSGQGREKGSY-SLSNYLQVKAVVTALKNPAWL 546
GG ++G G E G +L+ Y + A+ A L
Sbjct: 479 HGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAASAAIGTL 525
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 555 bits (1434), Expect = 0.0
Identities = 161/473 (34%), Positives = 255/473 (53%), Gaps = 6/473 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W +
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALP 64
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ + + + + EI+AL + GK + A+ EV T Y A WA + +
Sbjct: 65 AIERASWLRKISAGIRERASEISALIVEEGGKIQQL-AEVEVAFTADYIDYMAEWARRYE 123
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G +D P ++ +GV I+PWNFP + A K+ PAL GNTIV+K +E TP
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+A+ +K++ E GLP GV N+V G G T G LA + +V ++ TGS + G+ ++ AA
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA- 242
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
N+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV
Sbjct: 243 KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFV 302
Query: 365 EKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+ G+P + I GP I++ E++ + + V+ GA++ GG+ + KG
Sbjct: 303 NRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKG 362
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
YY PT+ V+ +M I +E FGPV ++ + L++ I +N S YGL + ++T NL+
Sbjct: 363 YYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNV 422
Query: 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
A ++ L+ G +IN + G+++SG G G + L YLQ + V
Sbjct: 423 AMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 542 bits (1399), Expect = 0.0
Identities = 152/483 (31%), Positives = 237/483 (49%), Gaps = 19/483 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ +NG++ S +P +G + V E+V+ ++A+KA W ++
Sbjct: 5 YKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALS 60
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +++
Sbjct: 61 YIERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRME 119
Query: 186 GLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
G EP+G+ I P+N+P+ + K+ PAL GN I K
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
Q +S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
++A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
D+ VEK + +G+P P ID++ + + I D GA T +R
Sbjct: 297 ADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR- 354
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
+G I P +F V DM +A +E FGPV I++ ++E I+ SN S+YGL A +FT+
Sbjct: 355 --EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTN 412
Query: 480 NLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538
+ A + L VG+V IN PF G K+SG G + YS+ VK+VV
Sbjct: 413 DFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
Query: 539 ALK 541
+K
Sbjct: 473 DIK 475
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 516 bits (1332), Expect = 0.0
Identities = 145/475 (30%), Positives = 231/475 (48%), Gaps = 11/475 (2%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ ING++ SG+T L+P VIT + + + A A+KA E W +
Sbjct: 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
T +R ++ + L + D+I + + G + + E+ T + + +
Sbjct: 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIK-STIELEQTIAILDEAMTYTGE 121
Query: 184 IQGL-TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
+ G+ P+D + P+GV I P+NFP+ + + PA+A GN++V K Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 242 TPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
T +S ++K AGLP GVLN++ G + ++ ++FTGST G+ + +
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+A K + LELGG +PF V DADVD+A + A + F +QGQ C +R VH+ VY
Sbjct: 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+FVEK A + GD GP I+ Q EK L+ I G +L G+R+
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV- 359
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
G + P VF G ++ IA+ E+F P+ +I+K E I +N ++YGL++ VFT +
Sbjct: 360 --GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSD 417
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVK 534
L+ + G +N V D+ I FGG K SG GR + + + K
Sbjct: 418 LEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTK 472
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 503 bits (1298), Expect = e-175
Identities = 130/479 (27%), Positives = 215/479 (44%), Gaps = 15/479 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ + NG + G+ T P + I V + D V AR+A+ W +
Sbjct: 24 NEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKI--WADIP 79
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +I+ + D L + +L + + GK EV + Y G + I
Sbjct: 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKIL-VEGVGEVQEYVDICDYAVGLSRMIG 138
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G P++ H + P+G+ G I +NFP+ ++ W A+ CGN + K A T L
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSL 198
Query: 245 SALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
++ V+K++ + LP + ++ G G G A+A V+ L+FTGST GK V
Sbjct: 199 ISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+ + LELGG + I EDAD+ A +A GQ C R F+HES++
Sbjct: 258 MVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+ V + + VG+P+ + GP + L + G + GG+ +
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD 376
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
G Y++PT+ TG+ D IA E F P+ + K+++ +EV +N + GL++ +FT +
Sbjct: 377 RPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD 436
Query: 481 LDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
L + + G V +N + FGG K +G GRE GS + Y++
Sbjct: 437 LGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 521 bits (1344), Expect = e-175
Identities = 146/478 (30%), Positives = 240/478 (50%), Gaps = 16/478 (3%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
ING+ V + PT++P + +V+ + + +V A++AA+ AF W
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDPR 590
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ +L+ A + E++A + + GK ++Q A +V YYA ++
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYAREMIRLGQP 649
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
P +EP GVA I PWNFPL + A+ GN +V K + T +
Sbjct: 650 QRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIG 709
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 304
++ +L EAGLP GV N G G G L H ++ +AFTGS TG +++ AAK
Sbjct: 710 WHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769
Query: 305 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
+N+K + E+GGK+ I+ +DAD+D+A Y+ F QGQ C A SR V ++VYD
Sbjct: 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYD 829
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+F+E+ ++A VG G D + + I +Y G G L
Sbjct: 830 KFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY-ESPVPAG 888
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
+GY++ T+ G+K + IA++EIFGPV ++++ KD D+ I+ +N++Q+ L G+F+ +
Sbjct: 889 EGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSP 948
Query: 482 DTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 536
+ R RVG+++IN + PFGG + SG G + G L +++ + V
Sbjct: 949 EHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVV 1006
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 499 bits (1286), Expect = e-173
Identities = 168/476 (35%), Positives = 238/476 (50%), Gaps = 9/476 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
I GQ+V S T L P TG VI + G D A+ A+ A W ++T
Sbjct: 13 KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A R ++ FA+ + + +A + + GK A+ EV +T Y A I+
Sbjct: 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSV-AEMEVDVTATFIDYGCDNALTIE 129
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G P+D + P GV I WNFPL + K+GPAL GNT+VLK ++TPL
Sbjct: 130 GDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPL 189
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ + ++ EAGLP GVLN+++G G G L + TGST GK + + +A
Sbjct: 190 ATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA- 248
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+ PV LELGGK+P +V +DAD+DKAAE A + F N GQ C R +VH SVYD+F+
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----G 420
K L VGDP Q GP+ + + + I + + GA + TGG+
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGF 368
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
G + +PTV VK D ++ +E FGP+ I+K +++ I+ N S YGL+A V T +
Sbjct: 369 EGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQS 428
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
N + L VG V+IN G+KQSG G E G + L YL+ K V
Sbjct: 429 FANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 493 bits (1273), Expect = e-172
Identities = 175/476 (36%), Positives = 268/476 (56%), Gaps = 5/476 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +T
Sbjct: 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA--WRALT 67
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +I
Sbjct: 68 AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIY 126
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P + + +PIGV I PWNFP M K GPALA G T+VLK A QTP
Sbjct: 127 GDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPF 186
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SAL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++ A
Sbjct: 187 SALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA- 245
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
EK K +GD G+ GP ID + K+ ++I ++ GA++ GG+ G
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGN 365
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484
+ +PT+ V + ++K+E FGP+ + ++KD +VI ++N +++GLAA + +L
Sbjct: 366 FFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRV 425
Query: 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
+ AL G V IN + + PFGG K SG GRE Y + +YL++K + L
Sbjct: 426 FRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 493 bits (1272), Expect = e-171
Identities = 181/476 (38%), Positives = 270/476 (56%), Gaps = 5/476 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q I G++ + S TF DP TG+ + V + A + RA+ AA+ A+ W T
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG--WRMKT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R+ DL+ ++D++A + T + GKP + A+ E+ ++A ++
Sbjct: 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKRVA 129
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P + + EPIGV I PWNFP M A KVGPALA G IV+K AE TP
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SAL ++ L AG+P GVL++V G G + S+ V KL+FTGST G++++ +A
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA- 248
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K +TLELGG +PFIV +DAD+D A E A + + N GQ C +R FVHE VYD F
Sbjct: 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
+K A K VG + G GP I+ +K+ +I + GA L TGG+R
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG 368
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484
+ +PTV TGVK DM +AK+E FGP+ + ++ +E+++ +N +++GLAA +++ ++
Sbjct: 369 FFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRV 428
Query: 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
+ AL G V IN + + PFGG KQSG GRE Y + +Y+ +K + A+
Sbjct: 429 WRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVAV 484
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 492 bits (1270), Expect = e-171
Identities = 182/477 (38%), Positives = 269/477 (56%), Gaps = 7/477 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+Q L+NG+++D+A G T +P G VI V + A+ A+ KA W T
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG--WAAKT 90
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ ++ DL+ + D+IA + T + GKP + A+ EV ++A A ++
Sbjct: 91 AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKRVY 149
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T PA + + +P+GV I PWNFP M K PALA G T++++ A+ TPL
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL + L +AG+P GVL IV+G GA L S+ V KL+FTGST G++++ A
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K ++LELGG +PFIV +DAD+D A + A + + N GQ C +R +V VYD+F
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
EK A + VG+ + G+ GP I+ + K+ +I V GAKL TGG+ LG G
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GL 386
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 484
+ +P + TGV DML+AK+E FGP+ + + +EVI ++N + +GLAA +T N A
Sbjct: 387 FFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRA 446
Query: 485 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541
+ AL G V N + + PFGG KQSG GRE Y + YL+ K + +A K
Sbjct: 447 IRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 488 bits (1260), Expect = e-169
Identities = 164/482 (34%), Positives = 239/482 (49%), Gaps = 6/482 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
I G++ DSA G TF +P TG VI V EDV AV A + A
Sbjct: 12 LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRL--TNPWP 69
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R K + D L+ + +EI + ++GKP+++ AQ EV F Y A +
Sbjct: 70 IETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKE-AQGEVDYAAGFFDYCAKHISALD 128
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
T P + P+GV G I+PWNFP+ M A K+ ALA G V+K A +TPL
Sbjct: 129 SHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPL 188
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ + ++ + LP G++N+V G G L H +V L+FTGST G+ ++ A
Sbjct: 189 TMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA- 247
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K + LELGG +PFIV +DAD++ AA+ F GQ C +R FVHE V D F
Sbjct: 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFG 307
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KG 423
+K K VGD GI GP I+ + F+K+ ++++ +D GA L G + G
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG 367
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
+ PTV GV +M ++E FGP+ + ++ +EVI N +++GLA+ VFT + +
Sbjct: 368 LFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAER 427
Query: 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 543
A + LR G V N PFGG K SG GRE G L +++ + V
Sbjct: 428 AQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFAEN 487
Query: 544 AW 545
+
Sbjct: 488 LY 489
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 477 bits (1231), Expect = e-165
Identities = 169/476 (35%), Positives = 262/476 (55%), Gaps = 11/476 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T + G+++ + TFP DP +G + VA+ + AV AA +AF W ++
Sbjct: 13 TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A ++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G L +PIGVA I PWNFP M KVG ALA G T+V+K AE TP
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 245 SALYVSKLLHEAGLPPGVLNIV---SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
SAL +++L +AG+P GV N++ G A+ + V K++FTGSTTTGKI+L
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA +++K V++ELGG +PFIV + A+VD+A A + F N GQ C ++ V ++D
Sbjct: 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 362 QFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
FV+ A A+ VG+ F+ G QGP I+ + EK+ K + V GA + TGG+R
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
+ +PT+ V DML +E FGP+ ++K+ +E I +NA+ GLA ++ +
Sbjct: 367 LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD 426
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536
+ L VG V +N + PFGG KQSG GRE Y + YL++K V
Sbjct: 427 PAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 450 bits (1159), Expect = e-154
Identities = 128/461 (27%), Positives = 209/461 (45%), Gaps = 5/461 (1%)
Query: 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141
+ +++P T + ++ ++ A++ A + + W R++I+ A+ L+
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62
Query: 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH 201
H DE+A + T + GK + ++ EV + + YYA ++ T + L
Sbjct: 63 EHEDELAKMMTLEMGKLLSE-SKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
+ GV PWNFPL P GN I+LK A P SA +K++ AG P G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
L + +A + +A TGS G V + A K NLK T+ELGG FI
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V +DAD + + A +N GQ C + R V +S YD+ + + + GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
P + EK+ ++ +D GAK+ + +KG + +PT+ T + D +
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359
Query: 442 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 501
E+FGP+ + +D + IQ +N S YGL + V ++D A + + G IN
Sbjct: 360 DKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGR 419
Query: 502 DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 542
+ +PFGG K+SG GRE L ++ V+ KN
Sbjct: 420 WITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKN 460
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 450 bits (1160), Expect = e-154
Identities = 98/495 (19%), Positives = 177/495 (35%), Gaps = 49/495 (9%)
Query: 75 VDSASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
++ + F + TG+ + +VN+A +AA K + + R+ +R+ ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLL 58
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
A LE +D+I A + P + E+ T R +A + A D
Sbjct: 59 RTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDT 117
Query: 194 P---------YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGNTIVLKTAEQT 242
P ++ +G NFPL A ALA G +++K
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177
Query: 243 PLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
P ++ V++ + +A LP + ++ G G AL SH E+ + FTGS G+ +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237
Query: 299 LQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKA--AELAHYALFFNQGQCCCAGSRTFV 355
LA + P ELG +P + A KA A+ ++ GQ C F
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297
Query: 356 HES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
+ F+E A +L P I + + G D G +
Sbjct: 298 LNTPETQAFIETAQSL------IRQQSPSTLLTPGIRDSYQS---QVVSRGSDDGIDVTF 348
Query: 415 GGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 471
+ +F ++ ++EIFGP I+ +++ +++ S
Sbjct: 349 SQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGS 404
Query: 472 LAAGVFTHNLDT--ANTLMRAL--RVGSVWINCF---DVFDAAIPFGGYKQS---GQGRE 521
L A + D + L+ L G + N + A+ GG +
Sbjct: 405 LTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS 464
Query: 522 KGSYSLSNYLQVKAV 536
G+ ++ +L+ A
Sbjct: 465 VGAEAIHRWLRPVAY 479
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 446 bits (1151), Expect = e-153
Identities = 137/459 (29%), Positives = 213/459 (46%), Gaps = 5/459 (1%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD 138
+ +++P TG + + A+++ A+S A F + W + +R++ +
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDIGQ 62
Query: 139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ 198
L H +E+A T + GKP +Q A+ EV + L +YA +
Sbjct: 63 ALRAHAEEMAQCITREMGKPIKQ-ARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAV 121
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
+ P+GV I+PWNFPL P L GN+ +LK A A ++++L EAG
Sbjct: 122 IEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGT 181
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P GV V+ + + + TGS G + A LK LELGG
Sbjct: 182 PAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
PFIV DAD++ A + A + N GQ C A R V E + F ++ A A +GD
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 438
P GP + +++ + +++ V GA+L GGE++ +G Y TV V DM
Sbjct: 300 PLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDM 359
Query: 439 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 498
+ E+FGPV +I KD + +N S++GL+A +FT + A + L G V+I
Sbjct: 360 TAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFI 419
Query: 499 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
N + DA + FGG K+SG GRE + L + V+ V
Sbjct: 420 NGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 385 bits (991), Expect = e-129
Identities = 116/502 (23%), Positives = 183/502 (36%), Gaps = 56/502 (11%)
Query: 66 TQLLINGQFVDSA-SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM 124
+ L+ G+++D A + + P P A G E VNRA AA +AF +
Sbjct: 30 GKHLVAGEWLDGAGTFASAPAHGPAHD-----FAVGTVELVNRACEAAEEAFWT--YGYS 82
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--- 181
+ ER+ + AD +E + I + + + G P + E TT R +A
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHIEKG 141
Query: 182 -------DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGN 232
D PA ++ + P+G NFPL ALA G
Sbjct: 142 DYLDRRVDAAMPERQPAPRQ-EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGC 200
Query: 233 TIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
+V+K P + V++ + A G+ PGV +++ G G AL H + + F
Sbjct: 201 PVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260
Query: 289 TGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAH---YALFFNQG 344
TGS G+ + L A P ELG +P + +A +A L +L G
Sbjct: 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAG 320
Query: 345 QCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
Q C V E D+F A K GI + + +F
Sbjct: 321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFAT------ 374
Query: 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGPVQSILKYKDLDE 460
K E + G P +F L +E+FGP+ +++ E
Sbjct: 375 ---RNAVKPLLATE---SSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAE 428
Query: 461 VIQRSNASQYGLAAGVFTHNLD--TANTLMRAL--RVGSVWINCF----DVFDAAIPFGG 512
+ + + Q L A + D TA L L + G V +N F +V D+ + G
Sbjct: 429 MEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGP 488
Query: 513 YKQSGQGREK--GSYSLSNYLQ 532
Y S G+ S+ +L+
Sbjct: 489 YPASTNFGATSVGTMSIRRFLR 510
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 380 bits (978), Expect = e-128
Identities = 80/467 (17%), Positives = 158/467 (33%), Gaps = 37/467 (7%)
Query: 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156
+ +++ ++ +KA +E + + + KI + + +A ++G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58
Query: 157 KPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
+ + F Y ++ G+ D T+ EP+G+ I+P P
Sbjct: 59 MGIVE-DKVIKNHFASEFIYNKYKDEQTCGIL-EEDDNLGTMTIAEPVGIICGIVPTTNP 116
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPT 272
+K +L N I+ + S +KL+ +A G P ++ +
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176
Query: 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332
AL H ++ + TG K AA S+ KP G P ++ E AD+ +A
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ F+ G C + V + VYD+ E+ + + +++ ID
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDAD-KVRKVLLIDG 290
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
KI+ + + E G ++ A + V D A E P +
Sbjct: 291 ALNAKIVGQPATAI-----AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGM 344
Query: 453 LKYKDLDEVIQRS----NASQYGLAAGVFTH---NLDTANTLMRALRVGSVWINCFDVFD 505
+ + ++ + ++ G +G++T+ N D ++ + IN
Sbjct: 345 FRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHG 404
Query: 506 A---AIPFGGYKQS--GQGREKGSYSLSN-----YLQVKAVVTALKN 542
F G G G+ N + K V +N
Sbjct: 405 GIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN 451
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 386 bits (994), Expect = e-124
Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 22/504 (4%)
Query: 45 TASSAAAAAEDPITPPVKVDYTQLLINGQFVD---SASGKTFPTLDPRTGDVITHVAEGE 101
AAA I P + N + V+ + T + +A+
Sbjct: 490 AIVRPQAAAHPRIPLPCD-LFAPERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADAT 548
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
+ + AV+AAR F W R A R+ + + A LLE + AL + GK +
Sbjct: 549 PDQAHAAVAAARAGFAG--WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDD 606
Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLM 219
A +E+ RYYA K+ G GP GV I PWNFPL +
Sbjct: 607 -ALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAI 665
Query: 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 279
F +V AL GN++V K AEQTP A LLHEAG+P L +V+G G GAAL +
Sbjct: 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTA 724
Query: 280 HMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H ++ + FTGST + + + A + + P+ E GG + I A ++ A+
Sbjct: 725 HPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVT 784
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397
+ F + GQ C A FV E V D+ +E A + +GDP GP ID E ++
Sbjct: 785 SAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQR 844
Query: 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK- 456
+ +I A+L G +G ++ P +F + +E+FGP+ +++Y+
Sbjct: 845 LDAHIARM-KTEARLHFAGPA--PEGCFVAPHIFELTEAG--QLTEEVFGPILHVVRYRP 899
Query: 457 -DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGY 513
+L+ V++ + YGL GV + D+ ++ ++VG++++N PFGG
Sbjct: 900 ENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGN 959
Query: 514 KQSGQG-REKGSYSLSNYLQVKAV 536
SG G + G + L+ + + V
Sbjct: 960 GLSGTGPKAGGPHYLARFATEQTV 983
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 340 bits (875), Expect = e-112
Identities = 142/463 (30%), Positives = 227/463 (49%), Gaps = 20/463 (4%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ ING++V+S + + ++P T +V+ V ED++ A A +AF W ++
Sbjct: 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKT--WSKVA 63
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R++I+ F LL +H +E+A L T +NGK ++ A EV + AG +
Sbjct: 64 VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKE-ALGEVGRGIENVEFAAGAPSLMM 122
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G + + PIGV G I P+NFP+++ W A+A GNT +LK +E+TPL
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ +L +AGLP GV N+V G + H E+ ++F GS G+ V + ++
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
NLK V G K+ IV DA+++ A F + G+ C A + V E + D+F+
Sbjct: 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKG 423
K +G+ G+ GP I + ++ L YI G++ GA+L G G
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
Y++ PT+F V +M I KDEIF PV S+++ K+L E I+ +N S++ A +FT N +
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNA 420
Query: 484 ANTLMRALRVGSVWINCFDVFDAAIP-------FGGYKQSGQG 519
+ G + IN +P F G+K S G
Sbjct: 421 IRYFRENIDAGMLGIN------LGVPAPMAFFPFSGWKSSFFG 457
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 334 bits (859), Expect = e-109
Identities = 134/486 (27%), Positives = 229/486 (47%), Gaps = 24/486 (4%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
SS + + + I+G+ V SG+ +P TG+V VA D+
Sbjct: 8 SSGVDLGTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLA 67
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
AV +A+ A + W R+++ ++F LL + +E+A + + ++GK + A+ +
Sbjct: 68 AAVESAKAAQPK--WAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDD-AKGD 124
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
+ + + G + GP + ++ +P+G+ I P+NFP ++ W
Sbjct: 125 IVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFA 184
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PA+ACGN +LK +E+ P + +++L+ EAGLP G+LN+V+G A A+ +H ++
Sbjct: 185 PAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAA 243
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
++F GST + V AA N K G K+ I+ DAD+D+AA A + + G+
Sbjct: 244 VSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGE 302
Query: 346 CCCAGSRT-FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
C A S V E ++ ++K + +G GP + E ++I I S
Sbjct: 303 RCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDS 362
Query: 405 GVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460
G++ GAKL G G++I +F V DM I K EIFGPV S+++ ++ +E
Sbjct: 363 GIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEE 422
Query: 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP-------FGGY 513
+ +YG ++T + D A + +G V +N IP FGG+
Sbjct: 423 ALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVN------VPIPVPLAYHSFGGW 476
Query: 514 KQSGQG 519
K S G
Sbjct: 477 KSSSFG 482
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 311 bits (800), Expect = e-101
Identities = 68/472 (14%), Positives = 146/472 (30%), Gaps = 56/472 (11%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
++V + +A KA E M+ + I+ AD +++A + + G Q
Sbjct: 12 QEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQD 69
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFA 221
+ ++ + + ++ + + V + P+GV +IP P
Sbjct: 70 KVIKNVFASK---HVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAGAAL 277
+K ++ GN+IV + L +++ E AG P G ++ ++ L
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186
Query: 278 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H + + TG + K AA S+ P G P + A++ +A +
Sbjct: 187 MKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEK--------ANALAMKRVVGDPFKGGIQQGPQ 389
+ F+ G C + V + + + + ++ + P
Sbjct: 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPA 301
Query: 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPV 449
I + + I V A++ E T V + ++ E P+
Sbjct: 302 IVGKSVQHIANLAGLTVPADARVLIAEE--------------TKVGAKIPYSR-EKLAPI 346
Query: 450 QSILKYKDLDEVIQRSNASQY----GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD 505
+ + E + S Y G + + + + V + +N
Sbjct: 347 LAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALG 406
Query: 506 AA-----------IPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 546
+ G S G N ++ + T + +
Sbjct: 407 GIGATTNLVPALTLGCGAVGGSSSSDNIGPE---NLFNIRRIATGVLELEDI 455
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 314 bits (808), Expect = e-101
Identities = 121/484 (25%), Positives = 199/484 (41%), Gaps = 29/484 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
++ + V + L P + + +NRA+ AA A E W
Sbjct: 66 CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPM 121
Query: 127 YERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI- 184
+R+++ L+ AD+L E+ A GK Q+ FR+ A +A ++
Sbjct: 122 ADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELE 181
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ G I P+NF + G GN ++ K ++ L
Sbjct: 182 GEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAI-GGNLAGAPALMGNVVLWKPSDTAML 240
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
++ V ++L EAGLPP ++ V GPT G + S + + FTGS T K + + A+
Sbjct: 241 ASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300
Query: 305 S-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+ + E GGK+ V ADVD + F GQ C A SR +V +S+
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360
Query: 360 YDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSG-VDGGAKLETGGE 417
+ Q + + VGDP + G ID++ F +I K++ + GG+
Sbjct: 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ 420
Query: 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNA-SQYGLAA 474
+ GYY++P + I K+EIFGPV ++ Y D E ++ ++ + YGL
Sbjct: 421 CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTG 480
Query: 475 GVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKGSYSLS 528
VF + R LR G+ +IN ++ PFGG + SG + G
Sbjct: 481 AVFAQDKAIVQEATRMLRNAAGNFYINDKST--GSVVGQQPFGGARASGTNDKPGGP--- 535
Query: 529 NYLQ 532
+Y+
Sbjct: 536 HYIL 539
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 262 bits (672), Expect = 6e-82
Identities = 128/458 (27%), Positives = 193/458 (42%), Gaps = 38/458 (8%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
++ AV AR AF G R + + L++ E+ AL D K
Sbjct: 18 SKISEAVKRARAAFSSGRTR--PLQFRIQQLEALQRLIQEQEQELVGALAA-DLHKNEWN 74
Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217
+ EV Y WA P + EP+GV I WN+P
Sbjct: 75 AYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPF 134
Query: 218 -LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L VG A+A GN +VLK +E + A ++ ++ + L + +++G G
Sbjct: 135 NLTIQPMVG-AIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTE 191
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
L D + +TGST GKI++ AAK +L PVTLELGGKSP V ++ D+D A
Sbjct: 192 LLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDS 392
+ F N GQ C A S+ +Q VE +K+ + + + ++ I +
Sbjct: 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVE-----KLKKSLKEFYGEDAKKSRDYGRIISA 304
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
F++++ I G K+ GG A YI PT+ T V + ++EIFGPV I
Sbjct: 305 RHFQRVMGLIE-----GQKVAYGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPI 358
Query: 453 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF----DAAI 508
+ + L+E IQ N + LA +F+ N ++ G V N DV ++
Sbjct: 359 VCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN--DVIVHITLHSL 416
Query: 509 PFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 546
PFGG SG G G S + ++ L P
Sbjct: 417 PFGGVGNSGMGSYHGKKSFETFSHRRSC---LVRPLMN 451
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 236 bits (605), Expect = 3e-72
Identities = 114/446 (25%), Positives = 189/446 (42%), Gaps = 30/446 (6%)
Query: 92 DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AAL 150
D H+ ++ SA + F R + + R + + + + + +AL
Sbjct: 17 DDDKHMNYLSPAKIDSLFSAQKAYFATRATA--DVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGV 206
D GKP + E+ + W + + P + EP GV
Sbjct: 75 AE-DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGV 133
Query: 207 AGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
I P+N+P+ L +G A+ GNT ++K +E TP ++ + K++ EA P + +
Sbjct: 134 TYIIGPFNYPVNLTLTPLIG-AIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAV 191
Query: 266 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325
+ G G + L S D + FTGS GK+V+Q AAK +L PV LELGGK P IV D
Sbjct: 192 IQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPD 248
Query: 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385
AD+D+ + F N GQ A +VH SV D +E + V
Sbjct: 249 ADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLE-----RLVERVKTELPEINS 303
Query: 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEI 445
G + Q ++++ + ++ G + + TV GV+ + + +E+
Sbjct: 304 TGKLVTERQVQRLVSLLE---ATQGQVLVGSQA-DVSKRALSATVVDGVEWNDPLMSEEL 359
Query: 446 FGPVQSILKYKDLDEVIQRSNASQ-YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 504
FGP+ +L++ + I + N LA VF ++D A ++ ++ G +N V
Sbjct: 360 FGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVN--GVM 417
Query: 505 ----DAAIPFGGYKQSGQGREKGSYS 526
+PFGG SG G G +S
Sbjct: 418 LHAFSPYLPFGGIGASGMGEYHGHFS 443
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 546 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.33 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 95.81 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-114 Score=926.62 Aligned_cols=479 Identities=43% Similarity=0.745 Sum_probs=460.8
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
...++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||. .|+++|..+|.++|++++++|++|
T Consensus 5 ~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 82 (490)
T 2wme_A 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRER 82 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 345799999999998999999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++..|+..+++.++||+.+++++.+...+...+...+++++|+|||++|+|||||+.+.+++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999998767999999999999999998887776666677899999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|.+.++
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987666
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
..++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~ 322 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence 65899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
+++||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 323 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (490)
T 2wme_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHH
Confidence 9999999999999999999999999999999998643 368999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+||++||+.|+|+++
T Consensus 403 eAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~ 482 (490)
T 2wme_A 403 EAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVE 482 (490)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEE
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred CCCCC
Q 009035 540 LKNPA 544 (546)
Q Consensus 540 ~~~~~ 544 (546)
+++.+
T Consensus 483 ~g~~~ 487 (490)
T 2wme_A 483 LGDYA 487 (490)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 88753
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-108 Score=889.33 Aligned_cols=478 Identities=38% Similarity=0.671 Sum_probs=457.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~--~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|++++++|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 4478999999998888999999999999999999999999999999999999 7 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
+.++|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 9999999999999999999986 999999999999999988777655433 45667899999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ ++||+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999999
Q ss_pred EeCCC--CCCC
Q 009035 538 TALKN--PAWL 546 (546)
Q Consensus 538 ~~~~~--~~~~ 546 (546)
++... ..||
T Consensus 508 ~~~~~~~~~~~ 518 (520)
T 3ed6_A 508 TNTNPQLVNWF 518 (520)
T ss_dssp EESSCCCCCCS
T ss_pred EcCCCCccCcc
Confidence 98763 3575
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-108 Score=883.96 Aligned_cols=471 Identities=38% Similarity=0.625 Sum_probs=453.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++. |+..+++.++||+.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999875 999999999999999888776655533 3567889999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999987555799999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999877788999999999999999999999999999999875
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-107 Score=881.11 Aligned_cols=474 Identities=35% Similarity=0.558 Sum_probs=455.4
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3455789999999988889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeee-ccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 221 (546)
+.++|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+...+...++.+ +|+|||++|+|||||+.+.+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999998 5999999999999999998877665544456678889 99999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 887 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC-CCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
+++++||+++.++++++.++|++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999986544 799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999998764
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-107 Score=881.10 Aligned_cols=472 Identities=43% Similarity=0.807 Sum_probs=450.3
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||+||++|++++.++.+|+++|+++|++||++|.|+.+|..+|.++|++++++|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 57999999987667899999999999999999999999999999999999855699999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC----CCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
|++++++|+|||+.+++..|+..+++.++||+.+++++.+...+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 999999999999999874599999999999999998877665443 2223568999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred h-hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 303 A-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 303 a-~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+ + ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 278 a~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 278 ALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 6 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC--HH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LD 459 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~--~~ 459 (546)
+++++||+++.++++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+| +|
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~d 436 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD 436 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHH
Confidence 9999999999999999999999999999999999986544699999999999999999999999999999999999 99
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 437 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 437 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999999999999999999877788999999999999999999999999999999875
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-107 Score=880.77 Aligned_cols=475 Identities=43% Similarity=0.730 Sum_probs=455.4
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++||+++.|+.++..+|.++|++++++|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45789999999988889999999999 99999999999999999999999999322899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.++. .|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999995 5999999999999999988877665544 456789999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 261 a~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 261 AR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred Hh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC-CCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
++++||+++.++++++.++|++++++|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 419 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999986544 7999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|++|+++||+.|+|+++..
T Consensus 420 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999998875
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-106 Score=875.85 Aligned_cols=482 Identities=40% Similarity=0.727 Sum_probs=456.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADL 139 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~---~W~~~~~~~R~~~L~~~a~~ 139 (546)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||.++ .|+.++..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344578999999998888999999999999999999999999999999999999843 69999999999999999999
Q ss_pred HHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCccc-C--C-CCCCceeeeeccceeEEEEcCccc
Q 009035 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P--A-DGPYHVQTLHEPIGVAGQIIPWNF 215 (546)
Q Consensus 140 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~-~--~-~~~~~~~~~~~P~GVv~~i~p~n~ 215 (546)
|+++.++|++++++|+|||+.+++. |+..+++.++|++.+++++.+... + . ..+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 9999999999999999999999875 999999999999999987765431 1 1 134568899999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHH
Q 009035 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (546)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 295 (546)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcc
Q 009035 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (546)
Q Consensus 296 ~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~ 375 (546)
+.|++.++. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEE
Q 009035 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453 (546)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~ 453 (546)
+|+|+++++++||+++.++++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 999999999999999999999999999999999999999998654 579999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhee
Q 009035 454 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 533 (546)
Q Consensus 454 ~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~ 533 (546)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++|++.
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~ 482 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCe
Confidence 99999999999999999999999999999999999999999999999887888999999999999999999999999999
Q ss_pred eEEEEeCCC--CCCC
Q 009035 534 KAVVTALKN--PAWL 546 (546)
Q Consensus 534 k~v~~~~~~--~~~~ 546 (546)
|+|++++.. +.||
T Consensus 483 k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 483 KQVTQYISEEPWGWY 497 (503)
T ss_dssp EEEEEECCSSCCCCS
T ss_pred EEEEEeCCCCccccc
Confidence 999987653 3565
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-107 Score=879.89 Aligned_cols=471 Identities=38% Similarity=0.644 Sum_probs=452.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999987889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++. |+..+++.++||+.++++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999876 999999999999999988776655433 3466789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999975 3689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++++
T Consensus 426 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 426 QANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 999999999999999999999999999999999999987778899999999999999999999999999999988764
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-107 Score=878.00 Aligned_cols=473 Identities=35% Similarity=0.614 Sum_probs=452.9
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 99 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEK 99 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 445679999999988766 999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
+.++|++++++|+|||+.++...|+..+++.++||+.+++++.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 100 ~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 100 EADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHH
Confidence 9999999999999999999834699999999999999998877665432 235568899999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 258 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999888999999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 259 aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d 337 (498)
T 4f3x_A 259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDD 337 (498)
T ss_dssp HHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSG
T ss_pred HHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCC-eEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
+++++||+++..+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 417 (498)
T 4f3x_A 338 TENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDD 417 (498)
T ss_dssp GGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSC
T ss_pred ccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999 99999987666899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 418 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 418 AVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999999999998887899999999999999999999999999999998764
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-106 Score=871.43 Aligned_cols=476 Identities=56% Similarity=0.975 Sum_probs=452.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++| .|+.++..+|.++|++++++|+++.
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357999999987777899999999999999999999999999999999999843 5999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
++|++++++|+|||+.++...|+..+++.++||+.+++++.+...+...+...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999998766799999999999999998877765444444567899999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.++.
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999982
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
.++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus 261 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 340 (501)
T 1bxs_A 261 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340 (501)
T ss_dssp TTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTC
T ss_pred ccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 341 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 420 (501)
T 1bxs_A 341 SQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKR 420 (501)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999865447999999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
+|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|+.+..
T Consensus 421 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 421 ANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccC
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999988753
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-106 Score=872.02 Aligned_cols=474 Identities=37% Similarity=0.625 Sum_probs=451.3
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
.+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|+.++..+|.++|++++++|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987777899999999999999999999999999999999999855699999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++..|+..+++.++|++.+++++.+...+.+.+...++.++|+|||++|+|||||+.+.+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999987459999999999999999887776544333446789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+||+|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8899999999999999999999999999999998
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 246 ~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 E-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp H-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred h-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+++||+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDA 404 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHH
Confidence 9999999999999999999999999999999997643 36999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++ ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 405 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 405 IAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 99999999999999999999999999999999999999987 7789999999999999999999999999999998765
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-106 Score=874.04 Aligned_cols=478 Identities=35% Similarity=0.568 Sum_probs=454.2
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (546)
.+.+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKI 85 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 344556899999999988889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHH
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (546)
+++.++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+. ..+...++.++|+|||++|+|||||+.+
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHH
Confidence 999999999999999999999884 99999999999999988877665443 2456678999999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCC
Q 009035 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (546)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p 379 (546)
+.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 245 ~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99887 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcc--cCC--CCceecceeeccCCCCCcccccccccceEEEEEe
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~ 455 (546)
+++++++||+++.++++++.++|++++++|+++++||.. .+. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 332 6999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 456 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~ 483 (497)
T 3k2w_A 404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKT 483 (497)
T ss_dssp SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEE
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred EEEeCCC
Q 009035 536 VVTALKN 542 (546)
Q Consensus 536 v~~~~~~ 542 (546)
|+.+...
T Consensus 484 v~~~~~~ 490 (497)
T 3k2w_A 484 VYINEAE 490 (497)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9988654
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-106 Score=870.78 Aligned_cols=475 Identities=60% Similarity=1.011 Sum_probs=451.5
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++| .|+.++..+|.++|++++++|+++.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987778899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
+|++++++|+|||+.++...|+..+++.++||+.++++..+...+...+...++.++|+|||++|+|||||+.+.+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987666999999999999999888776654443445578999999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.++..
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999833
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus 261 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 340 (500)
T 1o04_A 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTE 340 (500)
T ss_dssp TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 465 (546)
+||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 341 ~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 420 (500)
T 1o04_A 341 QGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRA 420 (500)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHH
T ss_pred cCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHH
Confidence 99999999999999999999999999999997644469999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 466 N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|+.+..
T Consensus 421 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 421 NNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp HCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred hcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 9999999999999999999999999999999999987777899999999999999999999999999999988753
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-105 Score=866.43 Aligned_cols=468 Identities=34% Similarity=0.577 Sum_probs=443.1
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 101 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKR 101 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHH
Confidence 466899999999988888999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeee-eccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.+++..|+..+++.++|++...+.......+. .+...++. ++|+|||++|+|||||+.+.++
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (497)
T 3i44_A 102 SSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPMNQVTL 180 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchHHHHHH
Confidence 999999999999999999985599999999999998776543322211 23446778 9999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~a 260 (497)
T 3i44_A 181 KVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNA 260 (497)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
++ ++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+
T Consensus 261 a~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~ 338 (497)
T 3i44_A 261 SN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQT 338 (497)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSC
T ss_pred hh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 87 8999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCc-ccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
++++||+++.++++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 418 (497)
T 3i44_A 339 GNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTED 418 (497)
T ss_dssp SSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHH
Confidence 99999999999999999999999999999999994 332 379999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||. ....+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 419 eAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 419 EAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 99999999999999999999999999999999999999995 556788999999999999999999999999999985
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-106 Score=874.86 Aligned_cols=470 Identities=39% Similarity=0.694 Sum_probs=450.9
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|++
T Consensus 12 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 89 (517)
T 3r31_A 12 QPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRE 89 (517)
T ss_dssp CCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHH
Confidence 3456789999999888889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhH----hcCcccCCCCCCceeeeeccceeEEEEcCccchHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (546)
+.++|++++++|+|||+.++ |+..+++.++|++.++++ +.+...+...+. .++.++|+|||++|+|||||+.
T Consensus 90 ~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 90 RNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp THHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999999987 899999999999999988 777665544445 8999999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 88999999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 245 ~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 323 (517)
T 3r31_A 245 AAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGD 323 (517)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999988 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcc-cC---CCCceecceeeccCCCCCcccccccccceEEEEE
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-LG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-~~---~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~ 454 (546)
|+|+++++||+++.++++++.++|++++++|+++++|| . .+ ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 324 PLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp TTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 99999999999999999999999999999999999999 4 22 3799999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheee
Q 009035 455 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534 (546)
Q Consensus 455 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k 534 (546)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|++|+++||+.|
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred EEEEeCC
Q 009035 535 AVVTALK 541 (546)
Q Consensus 535 ~v~~~~~ 541 (546)
+|+.+..
T Consensus 483 ~v~~~~~ 489 (517)
T 3r31_A 483 TVYVSTG 489 (517)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998764
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-105 Score=868.44 Aligned_cols=472 Identities=38% Similarity=0.698 Sum_probs=449.6
Q ss_pred ccCceecCEeeeCCCCCe-eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~-~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999998767788 99999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus 97 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 175 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHH
Confidence 999999999999999999865 9999999999999999887665443333345789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ ++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 176 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 254 (503)
T 1a4s_A 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 254 (503)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987 89999999999999999999999999999998
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 255 ~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 333 (503)
T 1a4s_A 255 K-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTE 333 (503)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc--C----CCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+++||+++.++++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 334 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (503)
T 1a4s_A 334 TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDT 413 (503)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCC
Confidence 999999999999999999999999999999999764 2 3699999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~ 493 (503)
T 1a4s_A 414 EEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493 (503)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEE
Confidence 99999999999999999999999999999999999999999998777889999999999999999999999999999998
Q ss_pred EeCC
Q 009035 538 TALK 541 (546)
Q Consensus 538 ~~~~ 541 (546)
.+..
T Consensus 494 ~~~~ 497 (503)
T 1a4s_A 494 VEMG 497 (503)
T ss_dssp ECCS
T ss_pred EccC
Confidence 8653
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-105 Score=863.11 Aligned_cols=471 Identities=37% Similarity=0.650 Sum_probs=452.4
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 44689999999988889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++. |+..+++.++|++.++.+..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 99999999999999999875 999999999999999887766654432 3556789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999999986555789999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999999999999999887888999999999999999999999999999999875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-105 Score=867.23 Aligned_cols=467 Identities=35% Similarity=0.511 Sum_probs=445.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|+++.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999987889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC--C----CCceeeeeccceeEEEEcCccchHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPLL 218 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~--~----~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (546)
++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. . +...++.++|+|||++|+|||||+.
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999886 999999999999999888766543321 1 3457889999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 99876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
|+ +++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 9999999999999999999999999999999999974 6899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
||||+++|+++|||+++|||+|.++++++++++++|+||||+++. ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 401 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~ 480 (505)
T 3prl_A 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480 (505)
T ss_dssp HHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEE
Confidence 999999999999999999999999999999999999999999876 4578999999999999999999999999999998
Q ss_pred EeCC
Q 009035 538 TALK 541 (546)
Q Consensus 538 ~~~~ 541 (546)
++..
T Consensus 481 ~~~~ 484 (505)
T 3prl_A 481 LNLA 484 (505)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 8754
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-105 Score=866.44 Aligned_cols=470 Identities=42% Similarity=0.726 Sum_probs=449.8
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++
T Consensus 28 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 28 LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999877788999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+. ..+...++.++|+|||++|+|||||+.+.+++++
T Consensus 106 la~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 184 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIA 184 (515)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhh
Confidence 99999999999999988 599999999999999998877765443 3345678999999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 185 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~- 263 (515)
T 2d4e_A 185 PALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD- 263 (515)
T ss_dssp HHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-
T ss_pred HHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999878899999999999999999999999999999987
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|++++
T Consensus 264 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 343 (515)
T 2d4e_A 264 HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETE 343 (515)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--------CCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+||+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|
T Consensus 344 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~ 422 (515)
T 2d4e_A 344 VGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD 422 (515)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCC
Confidence 99999999999999999999999999999997643 2699999999999 99999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 423 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~ 502 (515)
T 2d4e_A 423 EEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA 502 (515)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEE
Confidence 99999999999999999999999999999999999999999998777889999999999999999999999999999998
Q ss_pred EeCC
Q 009035 538 TALK 541 (546)
Q Consensus 538 ~~~~ 541 (546)
.+..
T Consensus 503 ~~~~ 506 (515)
T 2d4e_A 503 LPLR 506 (515)
T ss_dssp EESS
T ss_pred EcCC
Confidence 8753
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-105 Score=862.34 Aligned_cols=469 Identities=37% Similarity=0.652 Sum_probs=446.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.+ ++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999998755 8899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++..|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999998755899999999999999888766544322 2345688999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|.+.++++.|++||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999988889999999999999999999999999999998
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 259 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred h-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 7 799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCC-CeEecCCc-ccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+++|||++..+++++.++|++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 416 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQV 416 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999 99999997 43 36999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 417 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 417 VNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 999999999999999999999999999999999999999877788999999999999999999999999999999875
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-105 Score=858.84 Aligned_cols=471 Identities=34% Similarity=0.600 Sum_probs=448.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999987 4999999999999998887766654432 2446789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+||+|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987789999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC-C
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-G 382 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~-~ 382 (546)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 462 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai 462 (546)
++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 322 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi 401 (479)
T 2imp_A 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAI 401 (479)
T ss_dssp SCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999999997643469999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 463 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 463 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+++|+++|||+++|||+|.++++++++++++|+||||+++..++.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 402 ~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 402 SMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 99999999999999999999999999999999999999877788999999999999999999999999999999764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-104 Score=865.92 Aligned_cols=470 Identities=33% Similarity=0.556 Sum_probs=449.4
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999998 678999999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHH-hhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~-a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.+++. |+..+++.++||+.+ .+...+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999998 677777666544466789999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred hhcC------CcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc
Q 009035 303 AKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (546)
Q Consensus 303 a~~~------~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v 376 (546)
+. + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 5 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
|||+|+++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754579999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEc-CCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhee
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQV 533 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN-~~~~~-~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~ 533 (546)
|+||||+++|+++|||+++|||+|.++++++++++++|+|||| +++.. .+.+||||+|.||+| +++|.+||++|++.
T Consensus 430 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~ 509 (538)
T 3qan_A 430 DFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA 509 (538)
T ss_dssp SHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCe
Confidence 9999999999999999999999999999999999999999999 55554 789999999999999 99999999999999
Q ss_pred eEEEEeCC
Q 009035 534 KAVVTALK 541 (546)
Q Consensus 534 k~v~~~~~ 541 (546)
|+|+++..
T Consensus 510 k~v~~~~~ 517 (538)
T 3qan_A 510 KTVSEMYA 517 (538)
T ss_dssp EEEEEEC-
T ss_pred EEEEEecC
Confidence 99988753
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-105 Score=865.79 Aligned_cols=475 Identities=27% Similarity=0.450 Sum_probs=449.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999988889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
+.++|++++++|+|||+.+++. |+..+++.++||+.+++.+.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999875 99999999999999888776654332 234567899999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|. .+.++.|+.||+||+|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999994 5567999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEccc-chHHHHHHHHHhhhhcccCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~-v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++|+|+
T Consensus 260 aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 887 89999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc----CCCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
++++++||+++.++++++.++|++++++|+++++||... ..+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 999999999999999999999999999999999999752 2479999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhee
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQV 533 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g--~~~g~~~l~~~~~~ 533 (546)
|+||||+++|+++|||+++|||+|.++++++++++++|+||||++..+ .+.+||||+|.||+| +++|++|+++||+.
T Consensus 419 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~ 498 (521)
T 4e4g_A 419 NYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRT 498 (521)
T ss_dssp SHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheE
Confidence 999999999999999999999999999999999999999999997654 478999999999999 79999999999999
Q ss_pred eEEEEeCCC
Q 009035 534 KAVVTALKN 542 (546)
Q Consensus 534 k~v~~~~~~ 542 (546)
|+|+.+...
T Consensus 499 K~v~~~~~~ 507 (521)
T 4e4g_A 499 KTITSRWPS 507 (521)
T ss_dssp EEEEECCCC
T ss_pred EEEEEecCc
Confidence 999987643
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-104 Score=855.49 Aligned_cols=479 Identities=34% Similarity=0.546 Sum_probs=435.5
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (546)
..++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 445566899999999888889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC--CCCceeeeeccceeEEEEcCccchHH
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLL 218 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (546)
+++.++|++++++|+|||+.+++. |+..+++.++|++.++++..+ ..+.. .+...++.++|+|||++|+|||||+.
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999886 999999999999998887666 44422 34668899999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHH
Q 009035 219 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (546)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~t~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 297 (546)
..++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHhhc-CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc
Q 009035 298 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (546)
Q Consensus 298 i~~~aa~~-~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v 376 (546)
|++.+++. ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988742 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
|+|.++++++||+++.++++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++.. .+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 401 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp SHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999999998654 6889999999999999999999999999999
Q ss_pred EEEeC-----CCCCCC
Q 009035 536 VVTAL-----KNPAWL 546 (546)
Q Consensus 536 v~~~~-----~~~~~~ 546 (546)
|+++. .++-||
T Consensus 481 v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 481 IGIKRSAENLYFQSHH 496 (508)
T ss_dssp EEEECCSTTCCCC---
T ss_pred EEEecccchhcchhhc
Confidence 99875 345665
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-104 Score=852.09 Aligned_cols=467 Identities=36% Similarity=0.602 Sum_probs=446.4
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999764 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
+|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999885 99999999999999988877665443 234567899999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |.+.++++.|++||+||+|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8778899999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh-cccCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF 380 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~-~~vG~p~ 380 (546)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|+
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 987 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCc-eecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
++++++||+++..+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999753 3689 99999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999999999999999887778899999999999999999999999999999875
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-104 Score=849.70 Aligned_cols=454 Identities=28% Similarity=0.464 Sum_probs=439.2
Q ss_pred eeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhh
Q 009035 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161 (546)
Q Consensus 82 ~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 161 (546)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCC
Q 009035 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (546)
Q Consensus 162 a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 241 (546)
++ .|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 49999999999999999888776555445567899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEE
Q 009035 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (546)
Q Consensus 242 ~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~i 321 (546)
+|+++..|++++.++|+|+|++|+|+|.+.++++ |+.||+||+|+||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999998888888 9999999999999999999999999987 8999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 009035 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (546)
Q Consensus 322 V~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~ 401 (546)
|++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++||+++.++++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCH
Q 009035 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481 (546)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 481 (546)
|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999999987667899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 482 ~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
++++++++++++|+||||+++...+.+||||+|.||+|+++|++||++||+.|+|+++.
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 99999999999999999998888899999999999999999999999999999999875
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-103 Score=847.02 Aligned_cols=458 Identities=31% Similarity=0.551 Sum_probs=432.8
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (546)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975 56 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHH
Q 009035 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (546)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (546)
++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.+ +...++.++|+|||++|+|||||+.+.++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999875 999999999999999988776655543 5678899999999999999999999999999999
Q ss_pred hhcCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 228 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 228 LaaGN~VVlkps~~~p~t~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
|++||+||+|||+.+|+++.+|++++.++ |+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988889999999999999999999999999998876
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++.++++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999999 99999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
++|+++|||+++|||+|.++++++++++++|+||||+++.+ .+.+||||+|.||+|+++|.+||++||+.|+|+++.
T Consensus 387 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 387 IANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999999999998653 358999999999999999999999999999998875
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-103 Score=849.54 Aligned_cols=471 Identities=30% Similarity=0.495 Sum_probs=427.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC--CCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
++|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999987 999999999999999988777655432 346688999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+++|++.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~ 242 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEI 242 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999888899999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ ++||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.|
T Consensus 243 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~ 321 (485)
T 4dng_A 243 AGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321 (485)
T ss_dssp HHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred Hhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 987 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 322 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 398 (485)
T 4dng_A 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEA 398 (485)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHH
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHH
Confidence 9999999999999999999999999999999999975 6899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++.. .+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 399 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 399 IDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999999998654 688999999999999999999999999999998876
Q ss_pred CC
Q 009035 541 KN 542 (546)
Q Consensus 541 ~~ 542 (546)
..
T Consensus 479 ~~ 480 (485)
T 4dng_A 479 QY 480 (485)
T ss_dssp --
T ss_pred CC
Confidence 43
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-103 Score=843.91 Aligned_cols=464 Identities=32% Similarity=0.492 Sum_probs=440.7
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 79 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDK 79 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 347899999998644 899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CC----Cce-eeeeccceeEEEEcCccchHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPLL 218 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~~ 218 (546)
++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+ ... ++.++|+|||++|+|||||+.
T Consensus 80 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 80 EKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 99999999999999999864 999999999999999887665543322 23 355 899999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 238 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999878899999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 239 ~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 239 GKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 99876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
|++ ++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999 999999999999999999999999999999999975 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcC-CCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~-~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
||||+++|+++|||+++|||+|.++++++++++++|+||||+ +....+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 471 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEE
Confidence 999999999999999999999999999999999999999999 6666789999999999999999999999999999998
Q ss_pred EeC
Q 009035 538 TAL 540 (546)
Q Consensus 538 ~~~ 540 (546)
.+.
T Consensus 472 ~~~ 474 (475)
T 1euh_A 472 FDI 474 (475)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-103 Score=844.22 Aligned_cols=474 Identities=31% Similarity=0.495 Sum_probs=447.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC-CCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++ .|+..+++.++|++.+.+.+.+...+ ...+...++.++|+|||++|+|||||+.+.+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999999887 49999999999999887777665433 123445688999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.+..|++||+||+|+||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCe-EEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~-v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|+++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 7 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC-CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
++++||+++..+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ea 398 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999997432 36899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhheeeEEEE
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g--~~~g~~~l~~~~~~k~v~~ 538 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||++... ++.+||||+|.||+| +++|.+|+++|++.|+|+.
T Consensus 399 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~ 478 (486)
T 1t90_A 399 IEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478 (486)
T ss_dssp HHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999986443 478999999999999 8999999999999999998
Q ss_pred eCCCCC
Q 009035 539 ALKNPA 544 (546)
Q Consensus 539 ~~~~~~ 544 (546)
+..+|.
T Consensus 479 ~~~~~~ 484 (486)
T 1t90_A 479 RYPAPD 484 (486)
T ss_dssp ECCCCC
T ss_pred ecCCCC
Confidence 876664
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-102 Score=845.38 Aligned_cols=470 Identities=27% Similarity=0.481 Sum_probs=442.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|++++++|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 3568899999994 568999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.++. .|+..+++.++|++.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999999985 5999999999999998887766554432 234467889999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999988876 46999999999999 78899999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
|.++++++|||++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 335 PWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred cccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 99999999999999999999999999999999999999865457999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHH--HHhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~--~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
||||+++|+++|||+++|||+|.+++++++ +++++|+||||++.. ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~ 494 (500)
T 2j6l_A 415 EEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494 (500)
T ss_dssp HHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEE
Confidence 999999999999999999999999999999 779999999998654 34689999999999999999999999999999
Q ss_pred EEEeC
Q 009035 536 VVTAL 540 (546)
Q Consensus 536 v~~~~ 540 (546)
|+++.
T Consensus 495 v~~~~ 499 (500)
T 2j6l_A 495 CTINY 499 (500)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98753
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-103 Score=847.49 Aligned_cols=470 Identities=30% Similarity=0.444 Sum_probs=444.7
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+. .+++++||+||+++++++.++.+|+++|+++|++||+. .|+.++..+|.++|++++++|+++.
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45689999999863 78999999999999999999999999999999999872 3999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC---CC--CCceeeeeccceeEEEEcCccchHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPLLM 219 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~---~~--~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (546)
++|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+. .. +...++.++|+|||++|+|||||+.+
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999988 599999999999999988876655443 22 33678999999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ ++++.|+.||+||+|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8999999999999999999999999999
Q ss_pred HHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCC
Q 009035 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (546)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p 379 (546)
+.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCC-ceecceeeccCC---CCCcccccccccceEEEEEe
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKY 455 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptv~~~v~---~~~~i~~eE~fgPvl~v~~~ 455 (546)
+|+++++||+++.++++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 58 999999999999 99999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCC-CCCCCCCCccCCCCCCCCCcchHHHHHhhheee
Q 009035 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534 (546)
Q Consensus 456 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~-~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k 534 (546)
+|+||||+++|+++|||+++|||+|.++++++++++++|+||||++ +...+.+||||+|.||+|+++|.+++++|++.|
T Consensus 407 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k 486 (501)
T 1uxt_A 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 486 (501)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCcee
Confidence 9999999999999999999999999999999999999999999998 667789999999999999999999999999999
Q ss_pred EEEEeCC-CCCC
Q 009035 535 AVVTALK-NPAW 545 (546)
Q Consensus 535 ~v~~~~~-~~~~ 545 (546)
+|+.+.. .+.|
T Consensus 487 ~v~~~~~~~~~~ 498 (501)
T 1uxt_A 487 TIVFNYKGKGVW 498 (501)
T ss_dssp EEEEECTTSSSS
T ss_pred EEEEecCCCccc
Confidence 9988763 3444
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-103 Score=846.47 Aligned_cols=467 Identities=37% Similarity=0.637 Sum_probs=423.2
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 356789999999988889999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++..|+..+++.++|++.++++..+... +...++.++|+|||++|+|||||+...+++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999998556999999999999999887765432 235788999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999888
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ +++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcc-cC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-LG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
+++||+++.++++++.++|++++++|+++++||.. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~e 398 (478)
T 3ty7_A 319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDE 398 (478)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHH
Confidence 99999999999999999999999999999999943 22 4799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
||+++|+++|||+++|||+|.++++++++++++|+||||+ +...+.+||||+|.||+|+++|.+++++||+.|+|+.
T Consensus 399 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 399 AIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 9999999999999999999999999999999999999999 6667889999999999999999999999999999873
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-102 Score=842.50 Aligned_cols=467 Identities=33% Similarity=0.545 Sum_probs=440.4
Q ss_pred cCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 368999999963 5789999999 6999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC--CCCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
++|++++++|+|||+.+++ .|+..+++.++||+.+++++.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999987 49999999999999999888775432 22244568899999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hh-----cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccC
Q 009035 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (546)
Q Consensus 303 a~-----~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG 377 (546)
+. .++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 71 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+| ++++++|||++..+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999999 89999975334699999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhheee
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 534 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k 534 (546)
+||||+++|+++|||+++|||+|.++++++++++++|+||||+++. ..+.+||||+|.||+| +++|.+++++|++.|
T Consensus 431 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k 510 (516)
T 1uzb_A 431 FAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMK 510 (516)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCee
Confidence 9999999999999999999999999999999999999999998643 3578999999999999 589999999999999
Q ss_pred EEEEe
Q 009035 535 AVVTA 539 (546)
Q Consensus 535 ~v~~~ 539 (546)
+|+.+
T Consensus 511 ~v~~~ 515 (516)
T 1uzb_A 511 AVAER 515 (516)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99875
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-101 Score=824.36 Aligned_cols=457 Identities=30% Similarity=0.485 Sum_probs=437.1
Q ss_pred CCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCC
Q 009035 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (546)
Q Consensus 79 ~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 158 (546)
+..+++++||+||++|++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 457799999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEec
Q 009035 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (546)
Q Consensus 159 ~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (546)
+.+++. |+..+++.++|++.++++..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999875 9999999999999998887765522223456789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcC
Q 009035 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (546)
Q Consensus 239 s~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (546)
|+.+|+++.+|++++.++|+|+|++|+++| +.+.+..|+.||+|++|+||||+.+|+.|++.+++ ++||+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 56778899999999999999999999999999988 8899999999999
Q ss_pred cEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHH
Q 009035 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (546)
Q Consensus 319 p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~ 398 (546)
|+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEc
Q 009035 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 478 (546)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t 478 (546)
.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999987667899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 479 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 479 ~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999998888889999999999999999999999999999998753
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-100 Score=829.38 Aligned_cols=477 Identities=26% Similarity=0.389 Sum_probs=443.5
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
...++||||+|+.+. .++.++||.| |++|++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 456799999999853 4678999998 899999999999999999999999999 89999999999999999999999
Q ss_pred c-HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHH
Q 009035 143 H-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (546)
Q Consensus 143 ~-~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (546)
+ +++|+.++++|+|||+.+++..++..+++.++|++.+++++.+..... +.+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 999999999999999999887459999999999999998887754222 22334566778889999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
.++++||| +||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|.||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred HHhhcCCcc------eEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhc
Q 009035 301 LAAKSNLKP------VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (546)
Q Consensus 301 ~aa~~~~~p------v~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~ 374 (546)
.+++ ++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++
T Consensus 297 ~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 9987 6774 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCccccCCCHHHHHHHHHHHHHHHh-CCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEE
Q 009035 375 VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452 (546)
Q Consensus 375 ~vG~p-~~~~~~~Gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v 452 (546)
++||| .|+++++||+++.++++++.++|+++++ +|+++++||...+.+|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876668999999999999999999999999999999
Q ss_pred EEeCC--HHHHHHHH-HcCCCCceEEEEcCCHHHHHHHHHHhc--eeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchH
Q 009035 453 LKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGS 524 (546)
Q Consensus 453 ~~~~~--~~eai~~~-N~~~~gL~a~v~t~d~~~a~~~~~~l~--~g~V~iN~~~~--~~~~~pfgG~k~SG~g-~~~g~ 524 (546)
++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+||||+.++ ..+.+||||+|.||+| +++|+
T Consensus 456 ~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~ 535 (563)
T 4e3x_A 456 YVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGP 535 (563)
T ss_dssp EEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTST
T ss_pred EEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCH
Confidence 99997 79999999 799999999999999999999999976 99999999764 3567999999999998 89999
Q ss_pred HHHHhhheeeEEEEeCC--CCCCC
Q 009035 525 YSLSNYLQVKAVVTALK--NPAWL 546 (546)
Q Consensus 525 ~~l~~~~~~k~v~~~~~--~~~~~ 546 (546)
++|++|++.|+|.+... .++||
T Consensus 536 ~~l~~~~~~k~v~~~~~~~~~~~y 559 (563)
T 4e3x_A 536 HYILRWTSPQVIKETHKPLGDWRY 559 (563)
T ss_dssp TGGGGGBCCEEEEEECSCCCCSSC
T ss_pred HHHHHhCceEEEEEeCcCCCcccC
Confidence 99999999999998864 33453
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-99 Score=814.74 Aligned_cols=461 Identities=28% Similarity=0.412 Sum_probs=431.3
Q ss_pred CCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCC
Q 009035 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (546)
Q Consensus 78 ~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 157 (546)
.+++|++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred ChhhhhhccchHHHHHHHHHHHHhhHhcCccc-CC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEE
Q 009035 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235 (546)
Q Consensus 158 ~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~-~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 235 (546)
+... . .|+..++..++||+.++.+...... +. ......+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8644 3 4999999999999988877654332 22 23345677889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecC
Q 009035 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (546)
Q Consensus 236 lkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelg 315 (546)
+|||+.+|+++..+++++.++|+|+|++|+++| +.+.+..|..| +|+|+||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 66788888865 9999999999999999999988 7899999999
Q ss_pred CcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHH
Q 009035 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395 (546)
Q Consensus 316 G~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~ 395 (546)
||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++.++++|+|.++++++||+++..++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEecCCcccC-CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceE
Q 009035 396 EKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 474 (546)
Q Consensus 396 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a 474 (546)
+++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 394 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSA 394 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeE
Confidence 9999999999999999999997643 578999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhheeeEEEEeC---CCCCCC
Q 009035 475 GVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL---KNPAWL 546 (546)
Q Consensus 475 ~v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~~~~---~~~~~~ 546 (546)
+|||+|.++++++++++++|+||||++.. ..+..||||+|.||+| +++|.+|+++|++.|+|+++. ..|+||
T Consensus 395 ~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 395 AVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp EEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 99999999999999999999999998754 4578999999999998 789999999999999999875 458887
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-99 Score=813.39 Aligned_cols=461 Identities=30% Similarity=0.419 Sum_probs=435.8
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999864 57899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|++++++|+|||+.+++. |+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+.+.++++++
T Consensus 84 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999874 9999999999999988887766543222345677899999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.++.|+.||+||+|+||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999999999999999999 67899999999999999999999999999999887 7
Q ss_pred Ccce-EeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccc-hHHHHHHHHHhhhhcccCC-CCCCC
Q 009035 307 LKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGG 383 (546)
Q Consensus 307 ~~pv-~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v-~d~f~~~L~~~~~~~~vG~-p~~~~ 383 (546)
++|+ ++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.|++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++.++++++.++|++++++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999998766789999999999 999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||++ ++++|++.|+|+.+.
T Consensus 400 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999999999999999999999999999765 3578999999999974 589999999988764
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-97 Score=849.02 Aligned_cols=470 Identities=31% Similarity=0.517 Sum_probs=445.8
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+. ++.+++++||+| ++++++++.++.+|+++|+++|++||. .|+.+|..+|.++|++++++|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 468999999998 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
+++|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+. ..+..+++.++|+|||++|+|||||+.+.++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999875 99999999999999998877654332 3456678899999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hh-----cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccC
Q 009035 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (546)
Q Consensus 303 a~-----~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG 377 (546)
+. .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+|.|+++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d 924 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC
Confidence 99999999999999999999999999999999 99999976554599999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhheee
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 534 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k 534 (546)
+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.++. .+.+||||+|.||+| +++|+++|++|++.|
T Consensus 925 ~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k 1004 (1026)
T 4f9i_A 925 FDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPR 1004 (1026)
T ss_dssp HHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEE
T ss_pred HHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEE
Confidence 99999999999999999999999999999999999999999997653 467999999999999 579999999999999
Q ss_pred EEEEeC
Q 009035 535 AVVTAL 540 (546)
Q Consensus 535 ~v~~~~ 540 (546)
+|+++.
T Consensus 1005 ~v~~~~ 1010 (1026)
T 4f9i_A 1005 VVTENT 1010 (1026)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-97 Score=809.76 Aligned_cols=465 Identities=25% Similarity=0.335 Sum_probs=424.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.++..+|.++|++++++|++|.
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 46899999997644 579999999999999999987 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcc-------cCCC--CCCceeeeeccc-eeEEEEcCcc
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-------APAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~-------~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (546)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+.. .+.. .....++.++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999875 99999999999999887764321 1221 122457889997 9999999999
Q ss_pred chHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCch
Q 009035 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (546)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 293 (546)
||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|.+.+++..| +++|+|+||||+.
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~ 239 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD 239 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 89999999999665433322 5799999999999
Q ss_pred HHHHHHHHHh-hcCCcceEeecCCcCcEEEecCC-----CHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHH
Q 009035 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (546)
Q Consensus 294 ~g~~i~~~aa-~~~~~pv~lelgG~~p~iV~~dA-----Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L 367 (546)
+|+.|++.++ ..++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 240 ~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9999998875 23799999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc------CCCCceecceeeccCCCC--Cc
Q 009035 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKDD--ML 439 (546)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptv~~~v~~~--~~ 439 (546)
+++++++++|||+|+++++|||++..+++++.++|+++ .+|+++++||... ...|+|++|||+.+++++ |+
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 398 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL 398 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence 99999999999999999999999999999999999999 6899999999742 136999999999999987 69
Q ss_pred ccccccccceEEEEEeC---CH-----HHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh--ceeEEEEcCCCC------
Q 009035 440 IAKDEIFGPVQSILKYK---DL-----DEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV------ 503 (546)
Q Consensus 440 i~~eE~fgPvl~v~~~~---~~-----~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l--~~g~V~iN~~~~------ 503 (546)
+++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+||||+++.
T Consensus 399 i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~ 478 (534)
T 2y53_A 399 LHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTG 478 (534)
T ss_dssp TTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCC
T ss_pred HHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccc
Confidence 99999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ---CCCCCCccCCCCCCCCCc-chHHHHHhhheeeEEEEe
Q 009035 504 ---FDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 504 ---~~~~~pfgG~k~SG~g~~-~g~~~l~~~~~~k~v~~~ 539 (546)
..+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 479 ~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 479 HGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp SSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred cCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 357899999999999999 699999999999998763
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-95 Score=779.05 Aligned_cols=444 Identities=25% Similarity=0.403 Sum_probs=401.2
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChh
Q 009035 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (546)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (546)
..+++.||+||++|++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4578999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred hhhhccchHHHHHHHHHHHHhhHhcCcc-cCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEE
Q 009035 161 QSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236 (546)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~a~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 236 (546)
+++..|+..+++.++|++..+++..+.. .+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9875699999999999998887765432 221 124567899999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCC
Q 009035 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316 (546)
Q Consensus 237 kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG 316 (546)
|||+.+|+++..|++++.++ +|+|++|+|+| +.+.+..|+. ++||+|+||||+.+|+.|++.+++ ++||+++||||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 7788999998 789999999999999999999887 89999999999
Q ss_pred cCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHH
Q 009035 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396 (546)
Q Consensus 317 ~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~ 396 (546)
|||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||+++.++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 7776 999999999999
Q ss_pred HHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHc-CCCCceEE
Q 009035 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLAAG 475 (546)
Q Consensus 397 ~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~-~~~gL~a~ 475 (546)
++.++|+++. +++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~ 390 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEE
T ss_pred HHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEE
Confidence 9999999863 5999999753 36899999999999999999999999999999999999999999999 99999999
Q ss_pred EEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 476 VFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 476 v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 391 v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 391 VFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9999999999999999999999999743 568899999999999999999999999999999763
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-93 Score=768.14 Aligned_cols=428 Identities=28% Similarity=0.383 Sum_probs=395.5
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHH
Q 009035 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (546)
Q Consensus 100 ~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 179 (546)
.+.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||+.+++..|+..++..++|++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999 899999999999999999999999999999999999999999876799999999999877
Q ss_pred HhhHhcCcc-c---CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHH
Q 009035 180 WADKIQGLT-A---PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE 255 (546)
Q Consensus 180 ~a~~~~~~~-~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~ 255 (546)
...+..... . ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 655433221 1 111234678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHH
Q 009035 256 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335 (546)
Q Consensus 256 aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i 335 (546)
+ +|+|++|+++|.+ +.+..|+.| +||+|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 445667777 89999999999999999999887 899999999999999999999999999999
Q ss_pred HHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecC
Q 009035 336 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 415 (546)
Q Consensus 336 ~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 415 (546)
++++|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||+++.++++++.++| +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999988 699999999999999999999999999 68999999
Q ss_pred CcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeE
Q 009035 416 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 495 (546)
Q Consensus 416 g~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~ 495 (546)
|... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~ 401 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGG 401 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 9864 479999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 496 VWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 496 V~iN~~~--~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
||||++. ...+.+||||+|.||+|+++|.+|+++||+.|+|+.+.
T Consensus 402 V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 402 VAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred EEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 9999975 34688999999999999999999999999999998864
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-93 Score=774.46 Aligned_cols=453 Identities=24% Similarity=0.324 Sum_probs=414.3
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~-~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (546)
....++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34457899999998642 89999999998 9999999999999999999999 8999999999999999999999
Q ss_pred HcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHh--cCccc----CC---CCCCceeeeeccceeEEEEcC
Q 009035 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQIIP 212 (546)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~--~~~~~----~~---~~~~~~~~~~~P~GVv~~i~p 212 (546)
++.++|++++++|+|||+.+++. |+..+++.++||+.++++. .+... +. ..+...++.++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 99999999999999999999875 9999999999999988772 22221 11 122346889999999999999
Q ss_pred ccchHHHHH--HHHHHHhhcCCeEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCccEE
Q 009035 213 WNFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286 (546)
Q Consensus 213 ~n~P~~~~~--~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V 286 (546)
||||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.++++.|+.||+||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 99999999999999999999999999999875 468999999999999888999999999999999
Q ss_pred EecCCchHHHHHHHHHhhcCC--cceEeecCCcCcEEEecCC---CHHHHHHHHHHHHhccCCCcccCCCeEEEccc-ch
Q 009035 287 AFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VY 360 (546)
Q Consensus 287 ~ftGs~~~g~~i~~~aa~~~~--~pv~lelgG~~p~iV~~dA---Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~-v~ 360 (546)
+||||+.+|+.|++.+++ ++ ||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999987 77 8999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCC---
Q 009035 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD--- 437 (546)
Q Consensus 361 d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~--- 437 (546)
|+|+++|+++++++++| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 338 d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 99999999999987654 67899998888888877763 589999999975 7999999999988887
Q ss_pred CcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC--CHHHHHHHHHHhc--eeEEEEcCCCC---CCCCCCc
Q 009035 438 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDV---FDAAIPF 510 (546)
Q Consensus 438 ~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~--d~~~a~~~~~~l~--~g~V~iN~~~~---~~~~~pf 510 (546)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||++++ .++.+||
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 899999999999999999999999999999999999999999 8999999999998 99999999765 3578999
Q ss_pred cC-CCCCCCCCcc--hHHHHHhhheeeEE
Q 009035 511 GG-YKQSGQGREK--GSYSLSNYLQVKAV 536 (546)
Q Consensus 511 gG-~k~SG~g~~~--g~~~l~~~~~~k~v 536 (546)
|| +|.||+|+++ |++|+++|++.|++
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 99 9999999986 99999999999975
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-91 Score=754.16 Aligned_cols=443 Identities=21% Similarity=0.308 Sum_probs=405.8
Q ss_pred CCCCCeeeeecCCCCCEE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhc
Q 009035 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (546)
Q Consensus 77 ~~~~~~~~v~~P~tge~i-~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~ 155 (546)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 456788999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCChhhhhhccchHHHHHHHHHHHHhhH--hcCccc----CC--CCC-CceeeeeccceeEEEEcCccchHHHH--HHHH
Q 009035 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKV 224 (546)
Q Consensus 156 Gk~~~~a~~~ev~~~~~~l~~~a~~a~~--~~~~~~----~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l 224 (546)
|||+.++.. |+..+++.++||+.++++ ..+... +. +.+ ...++.++|+|||++|+|||||+.+. .+++
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999988764 999999999999998875 333221 11 111 13578999999999999999999985 4999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999988 56799999999999988889999999999999999999999999999
Q ss_pred HHhhcCC--cceEeecCCcCcEEEecCCCHH--HHHHHHHHHHhccCCCcccCCCeEEEccc-chHHHHHHHHHhhhhcc
Q 009035 301 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 375 (546)
Q Consensus 301 ~aa~~~~--~pv~lelgG~~p~iV~~dADl~--~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~-v~d~f~~~L~~~~~~~~ 375 (546)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9887 54 9999999999999999999999 99999999999999999999999999999 99999999999999876
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHH-hCCCeEecCCcccCCCCceecceeeccCCCC---CcccccccccceEE
Q 009035 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQS 451 (546)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~---~~i~~eE~fgPvl~ 451 (546)
+ ||++++.+.+++.++|++++ ++|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 4 68899999999999999999 47999999997 2899999999988777 99999999999999
Q ss_pred EEEeCCHHHHHHHHHcCCCCceEEEEcCCH--HHHHHHHHHh--ceeEEEEcCCCC---CCCCCCccC-CCCCCCCC--c
Q 009035 452 ILKYKDLDEVIQRSNASQYGLAAGVFTHNL--DTANTLMRAL--RVGSVWINCFDV---FDAAIPFGG-YKQSGQGR--E 521 (546)
Q Consensus 452 v~~~~~~~eai~~~N~~~~gL~a~v~t~d~--~~a~~~~~~l--~~g~V~iN~~~~---~~~~~pfgG-~k~SG~g~--~ 521 (546)
|++|+|+||||+++|+++|||+++|||+|. ++++++++++ ++|+||||++++ ..+.+|||| +|.||+|+ +
T Consensus 385 v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~ 464 (510)
T 1ez0_A 385 IVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS 464 (510)
T ss_dssp EEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS
T ss_pred EEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCC
Confidence 999999999999999999999999999987 7999999999 799999999765 457899999 79999985 4
Q ss_pred chHHHHHhhheeeEEE
Q 009035 522 KGSYSLSNYLQVKAVV 537 (546)
Q Consensus 522 ~g~~~l~~~~~~k~v~ 537 (546)
+|.+|+++|++.|++.
T Consensus 465 ~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 465 VGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSGGGGGGGEEEEEEE
T ss_pred ccHHHHHHhheEEEEc
Confidence 8999999999998764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-89 Score=779.82 Aligned_cols=435 Identities=30% Similarity=0.465 Sum_probs=411.1
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHH
Q 009035 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (546)
Q Consensus 97 v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 176 (546)
++.++.+|+++|+++|++||. .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 889999999999999999999 899999999999999999999999999999999999999999875 99999999999
Q ss_pred HHHHhhHhcCcc--cCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH
Q 009035 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (546)
Q Consensus 177 ~a~~a~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~ 254 (546)
|+.++++..+.. .+...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998877653 334456678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc--CCcceEeecCCcCcEEEecCCCHHHHH
Q 009035 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 332 (546)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~--~~~pv~lelgG~~p~iV~~dADl~~a~ 332 (546)
++|+|+|++|+|+|.+.+ +..|+.||+||+|+||||+.+|+.|++.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998877 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeE
Q 009035 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 412 (546)
Q Consensus 333 ~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v 412 (546)
+.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888 88
Q ss_pred ecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC--HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHH
Q 009035 413 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 490 (546)
Q Consensus 413 ~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~ 490 (546)
+||... ..|+|++|||+.+ ++|.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+++++++++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~ 934 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDR 934 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHH
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHh
Confidence 888753 4699999999974 6889999999999999999996 799999999999999999999999999999999
Q ss_pred hceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhheeeEEEEeC
Q 009035 491 LRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 491 l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+++|+||||+.++. .+.+||||+|.||+| +++|++++++|++.|+|+++.
T Consensus 935 l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 935 VQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999997653 357899999999999 679999999999999998874
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-83 Score=689.49 Aligned_cols=404 Identities=19% Similarity=0.169 Sum_probs=337.1
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhc-------C
Q 009035 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (546)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------G 156 (546)
-++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 5789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred CChh----hhhhccchHHHHHHHHHHHHhhHhcCcccCCC---CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhh
Q 009035 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229 (546)
Q Consensus 157 k~~~----~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 229 (546)
||+. ++. .|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 344 5999999999999988877766543321 2445688999999999999887 77776 89999999
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 230 CGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 230 aGN~VVlkps~~~p~t~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 7788999999999999999999999999999876
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
+||+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 799999999999999999999999999999999999 999999999999999998
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 465 (546)
||+ ++ +++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+|+||||+++
T Consensus 295 -~p~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~a 356 (463)
T 2h5g_A 295 -TPL-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHI 356 (463)
T ss_dssp -SHH-----HH---HHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHH
T ss_pred -hHH-----HH---HHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHH
Confidence 333 23 3578888999999855432 2345543 5789999999999999999999999999999
Q ss_pred HcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhheeeEEEEeC
Q 009035 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 466 N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g--~~--~g~~~l~~~~~~k~v~~~~ 540 (546)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+| ++ +|++|+++|++.|+|+.+.
T Consensus 357 N~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 357 HKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred HcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999999999999999999999999999998777889999999999999 75 9999999999999998764
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-81 Score=670.69 Aligned_cols=421 Identities=16% Similarity=0.209 Sum_probs=372.7
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHH
Q 009035 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (546)
Q Consensus 96 ~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 175 (546)
.++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+||+..+++..+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3455678999999999999999 89999999999999999999999999999999999999988876444444444443
Q ss_pred HHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHH----
Q 009035 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK---- 251 (546)
Q Consensus 176 ~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~---- 251 (546)
++.... +..+. .+.+.+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++
T Consensus 83 ~~~~~~-~~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDM-KTIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTC-CCSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhcc-cccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 333221 11111 122345667889999999999999999999999999999999999999999999999998654
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecC-CcCcEEEecCCCHHH
Q 009035 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDK 330 (546)
Q Consensus 252 ~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelg-G~~p~iV~~dADl~~ 330 (546)
++.++|+|+|++|+|++.+.+.++.|+.||+||+|+||||+.+ .+.++. ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999988899999999999999999999985 444454 78999 7888 999999999999999
Q ss_pred HHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhh-------hhcccCCCC-CCCCccccCCCHHHHHHHHHHH
Q 009035 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYI 402 (546)
Q Consensus 331 a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~-------~~~~vG~p~-~~~~~~Gpl~~~~~~~~~~~~i 402 (546)
|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999986 467899998 7899999999999999999999
Q ss_pred HHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHH----HHHHcCCCCceEEEEc
Q 009035 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI----QRSNASQYGLAAGVFT 478 (546)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~N~~~~gL~a~v~t 478 (546)
+.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t 379 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS 379 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEEC
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence 9999999999999863 456788865 79999999999999999997 7999999999999999
Q ss_pred CCHHHHHHHHHHhceeEEEEcCCCC---------CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCCC
Q 009035 479 HNLDTANTLMRALRVGSVWINCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 542 (546)
Q Consensus 479 ~d~~~a~~~~~~l~~g~V~iN~~~~---------~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~~ 542 (546)
+|.++++++++++++|+||||+++. ..+.+|||| +.+|.|.++|..++++|++.|+|..+.++
T Consensus 380 ~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~~ 451 (464)
T 3k9d_A 380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVLE 451 (464)
T ss_dssp SCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCCC
T ss_pred CCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCCc
Confidence 9999999999999999999999764 568899998 78999999999999999999999887643
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-81 Score=672.61 Aligned_cols=395 Identities=17% Similarity=0.183 Sum_probs=327.9
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCCh----hhhhhccchH-HHHHHHHHH
Q 009035 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (546)
Q Consensus 104 dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~a 178 (546)
.+++|+++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||. .++...|+.. ++..++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 47899999999999 8999999999999999999999999999999999999998 7775458998 999999999
Q ss_pred HHhhHhc------CcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHH
Q 009035 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (546)
Q Consensus 179 ~~a~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l 249 (546)
.++++.. +...+. +.+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887765 333221 12345689999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEE
Q 009035 250 SKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (546)
Q Consensus 250 ~~~l~----~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~i 321 (546)
++++. + +|+|+|++|+|+ +++++++.|..||+||+|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6778899999999999999999999999998765 689999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc---CCCCCCCCccccCCCHHHHHHH
Q 009035 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKI 398 (546)
Q Consensus 322 V~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v---G~p~~~~~~~Gpl~~~~~~~~~ 398 (546)
|++|||+|.|++.+++++|+|+| .|++++|||||+++ |+|+++|+++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 88743
Q ss_pred HHH-HHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 399 LKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 399 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
.++ |++++ ++++||. | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 345 66665 4677775 4 789997 78899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCcc-----CCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfg-----G~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|+|.++++++++++++|+||||+++...+.+||| |+|.||+|++ |.+++++|++.|+|+.+.
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999999987777889999 9999999999 999999999999998764
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-78 Score=648.52 Aligned_cols=389 Identities=20% Similarity=0.225 Sum_probs=336.0
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChh----hhhh-------ccchHH
Q 009035 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (546)
Q Consensus 102 ~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~ 170 (546)
.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5899999999999999 89999999999999999999999999999999999999853 4432 378889
Q ss_pred HHHHHHHHHHhhHhcCcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHH
Q 009035 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (546)
Q Consensus 171 ~~~l~~~a~~a~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~ 247 (546)
++.++|++.+++.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887542 333321 23456789999999999999998 8 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEE
Q 009035 248 YVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (546)
Q Consensus 248 ~l~~~l----~~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV 322 (546)
.|++++ .++|+|+|++|+|+|.+. ++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998655 5888898999999999999999999998764 6899999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc---CCCCCCCCccccCCCHHHHHHHH
Q 009035 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKIL 399 (546)
Q Consensus 323 ~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v---G~p~~~~~~~Gpl~~~~~~~~~~ 399 (546)
++|||+|.|++.+++++|+|+| .|++++|||||+++||+|+++|+++++++++ |+|.+ .
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------R 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------H
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------H
Confidence 9999999999999999999999 9999999999999999999999999999888 76531 3
Q ss_pred HHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC
Q 009035 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479 (546)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~ 479 (546)
++|+++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 374 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTE 374 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECS
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 5666542 1 2 22 3567899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhheeeEEEEeC
Q 009035 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 480 d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g----~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|.++++++++++++|+||||+++.+.+.+||||.|.||+| +++|++|+++||+.|+|++..
T Consensus 375 d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 375 DHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp BHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999999998888889999999999998 789999999999999998764
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-78 Score=645.74 Aligned_cols=387 Identities=21% Similarity=0.226 Sum_probs=345.4
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCCh----hhhhh-------ccchHH
Q 009035 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPMT 170 (546)
Q Consensus 102 ~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~~ 170 (546)
.+++++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+||+. .++.. .|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 5689999999999999 8999999999999999999999999999999999999885 44431 489999
Q ss_pred HHHHHHHHHHhhHhcCcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHH
Q 009035 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (546)
Q Consensus 171 ~~~l~~~a~~a~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~ 247 (546)
++.++||+.++++ .+...+. +.+...++.++|+|||++|+||| +.+.++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999988765 3433221 22445688999999999999886 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEE
Q 009035 248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (546)
Q Consensus 248 ~l~~~l~----~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV 322 (546)
.|++++. ++|+|+|++|+|+|. +++.++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 679999999999984 567889999999999999999999999998876 5899999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 009035 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (546)
Q Consensus 323 ~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i 402 (546)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999887652
Q ss_pred HHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHH
Q 009035 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482 (546)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~ 482 (546)
+.||... .+ |+ ||| ++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 360 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYS 360 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHH
Confidence 1233321 12 33 886 3467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhheeeEEEEeC
Q 009035 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 483 ~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g----~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+++++++++++|+||||++....+.+||||.|.||+| +++|++|+++|++.|+|+.+.
T Consensus 361 ~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 361 NAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 9999999999999999998777788999999999997 578999999999999998764
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-77 Score=639.43 Aligned_cols=419 Identities=17% Similarity=0.233 Sum_probs=350.4
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHH-H
Q 009035 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (546)
Q Consensus 97 v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 175 (546)
++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999 8999999999999999999999999999999999999999998765676677666 4
Q ss_pred HHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH-
Q 009035 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (546)
Q Consensus 176 ~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~- 254 (546)
+++.. +..+ ..+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1112 1222334457889999999999999999999999999999999999999999999999998888775
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHH
Q 009035 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (546)
Q Consensus 255 ---~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a 331 (546)
++|+|+|++|+|++.+.+.++.|+.||+|++|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998889999999999999999999998654 3444 78999999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCe
Q 009035 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (546)
Q Consensus 332 ~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~ 411 (546)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ .||+++.++++++.++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999885 39999999999999999877667777
Q ss_pred EecCCccc---CCCCceeccee-------eccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC----CCceEEEE
Q 009035 412 LETGGERL---GAKGYYIKPTV-------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVF 477 (546)
Q Consensus 412 v~~gg~~~---~~~g~~~~Ptv-------~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~----~gL~a~v~ 477 (546)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 6 476532 23689999998 778999999876 89999999999999999999999985 99999999
Q ss_pred cCCHHHHHH---HHHHhceeEEEEcCCCCCC-----------CCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCCCC
Q 009035 478 THNLDTANT---LMRALRVGSVWINCFDVFD-----------AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 543 (546)
Q Consensus 478 t~d~~~a~~---~~~~l~~g~V~iN~~~~~~-----------~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~~~ 543 (546)
|+|.+++++ +++++++|+|+||+++.+. +.+++ |++..|.+..++.-+.+++.+.|+|..+.+|+
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~~ 452 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAENM 452 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECCC---
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecCCC
Confidence 999888777 9999999999999976542 22333 45666767777888899999999999888774
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.19 Score=51.60 Aligned_cols=265 Identities=16% Similarity=0.192 Sum_probs=147.3
Q ss_pred CCCceeeeeccceeEEEEcCc---cchHHHHHHHHHHHhhcCCeE-EE-ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 009035 193 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTI-VL-KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~V-Vl-kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~ 267 (546)
.+......+.|+--|++..|. .||-..++ ..+||..+|+.= |+ -|++.. .....+.-..+.+|+.+ +..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM-~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVLM-NAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHHH-HHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHHH-hhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EEE
Confidence 455667889999999999994 46655555 578999999973 33 333221 11122333344566653 333
Q ss_pred CCchhHHHHHHc----CCCccEEEecCCchHHHHHHHHHhhcCCcceEeec-CCcCc-EEE-ecCCCHHHHHHHHHHHHh
Q 009035 268 GYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP-FIV-CEDADVDKAAELAHYALF 340 (546)
Q Consensus 268 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lel-gG~~p-~iV-~~dADl~~a~~~i~~~~f 340 (546)
-.|...-.+|.- -|.||+|+=.|..=+..+ +..-. + .|-..+ .|.+= +|| ++.+|.+..+..++.-+=
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~-g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAE 267 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF-G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAE 267 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB-T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHT
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc-C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhc
Confidence 335555455553 678999999988765432 22211 1 122222 23333 333 445899988776665554
Q ss_pred ccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC
Q 009035 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (546)
Q Consensus 341 ~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 420 (546)
+... .+.++|..+ ++|.++..+.+.++--. +...+ .++.+..+
T Consensus 268 Hd~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~-----------l~r~~-------i~~~sl~~------------ 310 (423)
T 4gic_A 268 HDED-----AQAILISPD--AAHLEAVQASIERLLPG-----------MERAE-------VIRTSLER------------ 310 (423)
T ss_dssp TCTT-----CEEEEEESC--HHHHHHHHHHHHHHGGG-----------CTTHH-------HHHHHHHH------------
T ss_pred cCCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhh-----------CccHH-------HHHHHHhc------------
Confidence 4432 334666655 44555554444331100 00111 11111110
Q ss_pred CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhc-eeEEEEc
Q 009035 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWIN 499 (546)
Q Consensus 421 ~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~-~g~V~iN 499 (546)
+| .++.++|++|+++++|..-.= ..-|.++|.. .+..+++ +|.|++.
T Consensus 311 -------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG 358 (423)
T 4gic_A 311 -------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMG 358 (423)
T ss_dssp -------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC
T ss_pred -------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecC
Confidence 11 355689999999999986444 6778899865 5777774 9999998
Q ss_pred CCCCC--CCC--CCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 500 CFDVF--DAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 500 ~~~~~--~~~--~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
.++.. ..+ -|=.=...+|..|+.+.-+++.|++..++.
T Consensus 359 ~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 359 RYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp ----------------CCCCTTGGGTCCCCCGGGGEEEEEEE
T ss_pred CCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeEE
Confidence 76431 111 011112345666777777888898887654
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=95.81 E-value=2.1 Score=44.06 Aligned_cols=260 Identities=18% Similarity=0.187 Sum_probs=148.7
Q ss_pred CCceeeeeccceeEEEEcCc---cchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 009035 194 PYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYG 270 (546)
Q Consensus 194 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~ 270 (546)
|......+.|+--|++..|. -||-..++ ..+||-.+|+.=|+-.+|-. ....+.-..+.+|..+ |..-.|
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM-~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vGG 186 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVGG 186 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHHHHH-HHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECCH
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhHHHH-hhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeeccc
Confidence 44566788999999999996 46654444 57899999987654332211 1122233345566663 333224
Q ss_pred hhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEeec-CCcCcEEE--ecCCCHHHHHHHHHHHHhccC
Q 009035 271 PTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSPFIV--CEDADVDKAAELAHYALFFNQ 343 (546)
Q Consensus 271 ~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lel-gG~~p~iV--~~dADl~~a~~~i~~~~f~~~ 343 (546)
...-.+|. +-|+||+|+=.|..=+.- ++..-......|-..+ .|.+=++| +++||.+..+..++.-+=+..
T Consensus 187 AQAIAAlAyGTetIp~VDkI~GPGN~yVa~--AKr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 187 AQAIAALAFGTESVPKVDKIFGPGNAFVTE--AKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHCCSSSCCCSEEECCCCHHHHH--HHHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHcCCCCCCCccEEECCCcHHHHH--HHHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 44444444 258899999888865432 1111100011222222 23333333 456899988776665554432
Q ss_pred CCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCC
Q 009035 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423 (546)
Q Consensus 344 GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g 423 (546)
. .+.++|..+ +++.++..+.+.++--.-| .. +.++.
T Consensus 265 ----~-a~aiLvT~s--~~la~~V~~ev~~ql~~lp-----------r~-------~ia~~------------------- 300 (434)
T 1kae_A 265 ----D-SQVILLTPA--ADMARRVAEAVERQLAELP-----------RA-------ETARQ------------------- 300 (434)
T ss_dssp ----T-CEEEEEESC--HHHHHHHHHHHHHHHTTCT-----------TH-------HHHHH-------------------
T ss_pred ----C-CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------hH-------HHHHH-------------------
Confidence 2 334666555 4445444444432110000 00 11111
Q ss_pred ceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEcCCC
Q 009035 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFD 502 (546)
Q Consensus 424 ~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN~~~ 502 (546)
-+..- .|+.++|++||++++|..-.= ..-|.++|.. .+..++ ++|.|++..++
T Consensus 301 ---------------------sl~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~~t 354 (434)
T 1kae_A 301 ---------------------ALNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWS 354 (434)
T ss_dssp ---------------------HHTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEESTTC
T ss_pred ---------------------HHHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCCCC
Confidence 11122 466789999999999986544 6788899964 666777 59999999875
Q ss_pred C---------CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 503 V---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 503 ~---------~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
. .++-+|- +|..|+.+.-+++.|++..++.
T Consensus 355 pe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 355 PESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp CHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEEE
T ss_pred chhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeEE
Confidence 4 1233555 4556677777888898887764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 546 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 0.0 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 0.0 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-164 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-146 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-123 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-120 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-104 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-102 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-60 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 5e-57 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-24 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 544 bits (1403), Expect = 0.0
Identities = 287/490 (58%), Positives = 353/490 (72%), Gaps = 2/490 (0%)
Query: 52 AAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSA 111
A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV A
Sbjct: 1 AVPAPNQQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKA 59
Query: 112 ARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
AR AF G W RM A R +++ R ADL+ER +AALET DNGKP+ S ++ M
Sbjct: 60 ARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV 119
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230
+ RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA
Sbjct: 120 LKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAT 179
Query: 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTG
Sbjct: 180 GNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG 239
Query: 291 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350
ST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAG
Sbjct: 240 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG 299
Query: 351 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 410
SRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GA
Sbjct: 300 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGA 359
Query: 411 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 470
KL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S Y
Sbjct: 360 KLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTY 419
Query: 471 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 530
GLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y
Sbjct: 420 GLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 479
Query: 531 LQVKAVVTAL 540
+VK V +
Sbjct: 480 TEVKTVTVKV 489
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 544 bits (1402), Expect = 0.0
Identities = 267/483 (55%), Positives = 345/483 (71%), Gaps = 2/483 (0%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
P+T + YT++ IN ++ S SGK FP +P T + + V EG+ EDV++AV AAR+A
Sbjct: 5 PLTNL-QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQA 63
Query: 116 FDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G W M A ER +++ + ADL+ER +A +E + GK F + ++ +
Sbjct: 64 FQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTL 123
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY AGWADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+
Sbjct: 124 RYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTV 183
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST
Sbjct: 184 VVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEV 243
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR F
Sbjct: 244 GKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLF 303
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG GAKLE
Sbjct: 304 VEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLEC 363
Query: 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 474
GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+N + YGL+A
Sbjct: 364 GGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSA 423
Query: 475 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534
G+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y Y +VK
Sbjct: 424 GIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 483
Query: 535 AVV 537
V
Sbjct: 484 TVT 486
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 474 bits (1220), Expect = e-164
Identities = 180/492 (36%), Positives = 274/492 (55%), Gaps = 12/492 (2%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF 116
T V V G+ + S G T P +P TG V+ + AE+V++AV +A+ A+
Sbjct: 12 TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAY 71
Query: 117 DEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
+ W +M ERS+++L A ++ D IA LE +N A+ ++ + Y
Sbjct: 72 LK--WSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-GKTITEAEYDIDAAWQCIEY 128
Query: 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
YAG A + G G T EP+GV I+ WN+P ++ AWK PALACGN +V
Sbjct: 129 YAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVF 188
Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
K + TP++ + ++++ HEAG+P G++N+V G G G+ L H V K++FTGS TGK
Sbjct: 189 KPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGK 247
Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ C G+R FV
Sbjct: 248 KVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQ 306
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ QF+E+ VVGDP + G I Q +K+L ++ GA++ GG
Sbjct: 307 REIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGG 366
Query: 417 ERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 470
E L GY++ P V +DDM K+EIFGPV S+L + +EV+QR+N + +
Sbjct: 367 EPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTF 426
Query: 471 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 530
GLA+GVFT ++ A+ + L G+ +IN + + +PFGGYK SG GRE G ++ Y
Sbjct: 427 GLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYY 486
Query: 531 LQVKAVVTALKN 542
Q+K V+ + +
Sbjct: 487 SQLKTVIVEMGD 498
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 426 bits (1097), Expect = e-146
Identities = 174/474 (36%), Positives = 261/474 (55%), Gaps = 7/474 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+LLING+ V G+ P +P TGDV+ +AE AE V+ AV AA AF E W + T
Sbjct: 3 HKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R++ +L+ AD++E + A LE+ + GKP + E+P +FR++AG A +
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
GL A H +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ ++
Sbjct: 180 TALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTA 237
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
S++K +ELGGK+P IV +DAD++ E ++N GQ C A R + + +YD V
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKG 423
EK A G P + GP E++ K + G K+ TGGE+ G
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG 357
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 483
YY PT+ G D I + E+FGPV S+ + + ++V+ +N SQYGLA+ V+T ++
Sbjct: 358 YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGR 417
Query: 484 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
A+ + L+ G W+N + + +P GG K SG G++ Y L +Y V+ V+
Sbjct: 418 AHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 369 bits (947), Expect = e-123
Identities = 145/481 (30%), Positives = 227/481 (47%), Gaps = 17/481 (3%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+ +NG++ S +P +G + V E+V+ ++A+KA W ++
Sbjct: 5 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALSY 60
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL-----FRYYAGWA 181
ER+ + + AD+L R ++I A+ + + K ++ + V +
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
G A EP+G+ I P+N+P+ + K+ PAL GN I K Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
+S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ + ++
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+ VEK + + + P ID++ + + I D GA T +R
Sbjct: 298 ELVEK-IREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 353
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481
+G I P +F V DM +A +E FGPV I++ ++E I+ SN S+YGL A +FT++
Sbjct: 354 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 413
Query: 482 DTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540
A + L VG+V IN PF G K+SG G + YS+ VK+VV +
Sbjct: 414 PRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 473
Query: 541 K 541
K
Sbjct: 474 K 474
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 361 bits (928), Expect = e-120
Identities = 157/499 (31%), Positives = 245/499 (49%), Gaps = 19/499 (3%)
Query: 49 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNR 107
A A + Y L I G++VD+ + +L+P +V+ A+ +
Sbjct: 22 AMREALRRVREEFGRHY-PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEA 78
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
A+ AA KAF W +RS+++L+ A L+ R E+ A ++ GK + ++ +V
Sbjct: 79 ALEAAWKAFKT--WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADV 135
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPY--HVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
YYA A + + ++ + P+G I PWNFP+ +F +
Sbjct: 136 AEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
+A GNT++ K AE + V ++ HEAG PPGV+N + G G GA L H +
Sbjct: 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRF 255
Query: 286 LAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
+ FTGS G + + A + + K +E GGK+ IV E AD D AAE + +
Sbjct: 256 INFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY 315
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
QGQ C A SR + + Y+ +E+ A + VG P + GP + +EQ K+L
Sbjct: 316 GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLS 374
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460
YI G + G + GG+RL +GY+I PTVFT V IA++EIFGPV S+++ KD E
Sbjct: 375 YIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAE 433
Query: 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQ 518
++ +N + YGL GV++ + R VG+++ N PFGG+K SG
Sbjct: 434 ALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGT 493
Query: 519 GREKGSYS-LSNYLQVKAV 536
+ G+ L +L++KAV
Sbjct: 494 NAKTGALDYLRLFLEMKAV 512
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 321 bits (823), Expect = e-104
Identities = 141/478 (29%), Positives = 210/478 (43%), Gaps = 15/478 (3%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+ G++ S G+ P I V E+V R + K M
Sbjct: 18 PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS-ARDMPG 74
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER ++ + AD++ER+ D A + + GKP A EV R KI G
Sbjct: 75 TERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDRLRLAELDLKKIGG 133
Query: 187 LTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
P D Y EP+GV I P+N+PL K+ + GN +V+K +
Sbjct: 134 DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSIS 193
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
PL A K L +AG PP + +++ G A + + V ++FTGST G+ V+++
Sbjct: 194 DPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK-IVADDRVAAVSFTGSTEVGERVVKV 252
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
+K +ELGG P IV EDAD+D AA+ ++ GQ C A VY
Sbjct: 253 GG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYG 309
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+ VE+ VGDP + GP I ++++ I V+ G ++ GG RLG
Sbjct: 310 KLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP 369
Query: 422 KGYYIKP-TVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 480
DM++ K E+F PV S ++ KDLD+ I+ +N YGL A VF +
Sbjct: 370 TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRD 429
Query: 481 LDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537
+ +R L VG+++IN PFGG K+SG RE Y++ K +V
Sbjct: 430 VVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 487
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 313 bits (802), Expect = e-102
Identities = 114/439 (25%), Positives = 174/439 (39%), Gaps = 19/439 (4%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++ V AR+AF+ + R + + ++ + I+ D GK S
Sbjct: 2 ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59
Query: 165 TEVPMTTRLFRYYA----GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
EV WA+ + EP+GV I WN+P +
Sbjct: 60 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
+ A+A GN ++LK +E + A ++ L+ + + G
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ---YMDQNLYLVVKGGVPETTELLK 176
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
D + +TGST GKIV+ AAK +L PVTLELGGKSP V +D D+D A + F
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
N GQ C A S+ +Q VEK G+ K G I+ F+++
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKG 294
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460
I + G YI PT+ V + ++EIFGPV I+ + L+E
Sbjct: 295 LIDNQK------VAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEE 348
Query: 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQ 518
IQ N + LA VF++N ++ G V N + +PFGG SG
Sbjct: 349 AIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGM 408
Query: 519 GREKGSYSLSNYLQVKAVV 537
G G S + ++ +
Sbjct: 409 GAYHGKKSFETFSHRRSCL 427
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 205 bits (522), Expect = 2e-60
Identities = 83/488 (17%), Positives = 157/488 (32%), Gaps = 43/488 (8%)
Query: 79 SGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
+ F + TG+ + +VN+A +AA K + + R+ +R+ ++ A
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58
Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----- 192
LE +D+I A + P + E+ T R +A + A D
Sbjct: 59 SELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117
Query: 193 ----GPYHVQTLHEPIGVAGQIIPWNFPL--LMFAWKVGPALACGNTIVLKTAEQTPLS- 245
++ +G NFPL ALA G +++K P +
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177
Query: 246 ---ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
A + + L + LP + ++ G G AL SH E+ + FTGS G+ + LA
Sbjct: 178 QIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAEL---AHYALFFNQGQCCCAGSRTFVHESV 359
+ G + + A+L ++ GQ C F +
Sbjct: 238 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 297
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
Q + +++ + I +
Sbjct: 298 ETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS---------QAE 348
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479
+ ++EIFGP I+ +++ +++ S L A +
Sbjct: 349 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHAT 408
Query: 480 NLDT--ANTLMRALR--VGSVWINCF----DVFDAAI---PFGGYKQSGQGREKGSYSLS 528
D + L+ L G + N + +V A + P+ S G+ ++
Sbjct: 409 EEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIH 467
Query: 529 NYLQVKAV 536
+L+ A
Sbjct: 468 RWLRPVAY 475
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 194 bits (492), Expect = 5e-57
Identities = 69/451 (15%), Positives = 126/451 (27%), Gaps = 61/451 (13%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
+++ R+A+D T E++K I + A+ L+ EI D K E+
Sbjct: 1 DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58
Query: 163 -----------AQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQII 211
+ + G D + + ++ + + I
Sbjct: 59 VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118
Query: 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YG 270
+ + AL GNTI+L+ S + + EA +
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178
Query: 271 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDK 330
T + + + + + G ++ + PV G V E AD+ K
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238
Query: 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQI 390
A + A C A + VHE + +F+ K V ++
Sbjct: 239 AVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPD 297
Query: 391 DSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 450
E E +
Sbjct: 298 VVPATEDDWPT------------------------------------------EYLDLII 315
Query: 451 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF 510
+I K++DE I+ G + + T N A + + +V++N F F
Sbjct: 316 AIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQF 375
Query: 511 GGYKQSGQGREK----GSYSLSNYLQVKAVV 537
G + G ++ G L K VV
Sbjct: 376 GFGAEIGISTQRFHARGPVGLRELTTYKFVV 406
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 103 bits (257), Expect = 3e-24
Identities = 61/431 (14%), Positives = 119/431 (27%), Gaps = 63/431 (14%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
+ ARKA + ++ RS I+ + D L+ + I N + +
Sbjct: 5 SQQIAKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEE----ANKIDLAVAKE 58
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQ--------------- 209
T + + L R DK + + G V L +P+G
Sbjct: 59 TGLA-DSLLKRLDLFKGDKFEVM---LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTA 114
Query: 210 -----IIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL---HEAGLPPG 261
++ + + A ++ GN +LK +++ + ++K++
Sbjct: 115 PVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSET 174
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
+ + S ++ ++ D+ +++ + PV G
Sbjct: 175 GVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIY 234
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
+ EDAD+ KA ++ A C ++ + N V
Sbjct: 235 LDEDADLIKAKRISLDAKTNYPAGCNA-METLLINPKFSKWWEVLENLTLEGGVT----- 288
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLI 440
I + D LG TV + D
Sbjct: 289 --------------------IHATKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDF-- 326
Query: 441 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 500
E + + IQ N + T N A M+ + V+ N
Sbjct: 327 -DKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNA 385
Query: 501 FDVFDAAIPFG 511
F +G
Sbjct: 386 STRFADGFRYG 396
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 546 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.95 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=2.8e-108 Score=888.16 Aligned_cols=482 Identities=55% Similarity=0.971 Sum_probs=465.1
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL 139 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~ 139 (546)
..++++++||||+|+++.++++++++||+||++|++++.++.+|++.|+++|++||+.+ .|++++.++|.++|++++++
T Consensus 9 ~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~ 88 (494)
T d1bxsa_ 9 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 45678899999999998889999999999999999999999999999999999999742 59999999999999999999
Q ss_pred HHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHH
Q 009035 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (546)
Q Consensus 140 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (546)
|++++++|++++++|+|||+.++...|+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+..
T Consensus 89 L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 168 (494)
T d1bxsa_ 89 IERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchhHH
Confidence 99999999999999999999987766899999999999999999888877777777889999999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+++++++.|++||+|++|.||||+.+|+.|+
T Consensus 169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~ 248 (494)
T d1bxsa_ 169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCC
Q 009035 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (546)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p 379 (546)
+.+++.++||+++||||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~ 328 (494)
T d1bxsa_ 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred HHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeecc
Confidence 99887679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
.++++++||+++.++++++.++|++++++|+++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+|+|
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~ 408 (494)
T d1bxsa_ 329 LTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 408 (494)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred CCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHH
Confidence 99999999999999999999999999999999999998877889999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||+++..++.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 409 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~ 488 (494)
T d1bxsa_ 409 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 488 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999998
Q ss_pred CCC
Q 009035 540 LKN 542 (546)
Q Consensus 540 ~~~ 542 (546)
+..
T Consensus 489 ~~~ 491 (494)
T d1bxsa_ 489 ISQ 491 (494)
T ss_dssp CSC
T ss_pred cCC
Confidence 754
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=6.7e-107 Score=876.89 Aligned_cols=481 Identities=59% Similarity=0.997 Sum_probs=463.3
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL 139 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~ 139 (546)
+++.++++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.+ .|++++..+|.++|+++++.
T Consensus 9 p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~ 88 (494)
T d1o04a_ 9 PEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 34677899999999998889999999999999999999999999999999999999742 59999999999999999999
Q ss_pred HHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHH
Q 009035 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (546)
Q Consensus 140 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (546)
|++++++|++++++|+|||+.++...|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+..
T Consensus 89 l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 89 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHH
Confidence 99999999999999999999998767999999999999999999888877777777889999999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+++++++.|+.||+|+.|.||||+++|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCC
Q 009035 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (546)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p 379 (546)
+.++..++||+++||||+||+||++|||+|.|++.+++++|+++||+|++++++|||++++|+|++.|++++.++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence 98875589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
.++++++||+++..+++++.++|++++++|+++++||....++|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~ 408 (494)
T d1o04a_ 329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 408 (494)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999999998777789999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++..++.+||||+|.||+|+++|.++|++||+.|+|+++
T Consensus 409 eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~ 488 (494)
T d1o04a_ 409 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 488 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEe
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999999987
Q ss_pred CC
Q 009035 540 LK 541 (546)
Q Consensus 540 ~~ 541 (546)
.+
T Consensus 489 ~p 490 (494)
T d1o04a_ 489 VP 490 (494)
T ss_dssp CS
T ss_pred CC
Confidence 54
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.4e-104 Score=859.53 Aligned_cols=484 Identities=37% Similarity=0.693 Sum_probs=459.9
Q ss_pred CCCCCCCccCceecCEeeeCCCCCee-eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 009035 58 TPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRF 136 (546)
Q Consensus 58 ~~~~~~~~~~~~I~G~~~~~~~~~~~-~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~ 136 (546)
+....++...+||||+|+++.+|+++ +++||+||++|++++.++.+|+++|+++|++||+ .|++++..+|.++|+++
T Consensus 12 ~~~~~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~ 89 (503)
T d1a4sa_ 12 TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEA 89 (503)
T ss_dssp TTTCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred CCceeecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHH
Confidence 34455556678999999998777765 6999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccch
Q 009035 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216 (546)
Q Consensus 137 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 216 (546)
+++|++++++|++++++|+|||+.++.. |+..+++.++|++.+.++..+...+.+.+...++.++|+|||++|+|||||
T Consensus 90 a~~L~~~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP 168 (503)
T d1a4sa_ 90 ARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYP 168 (503)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHhHHHHHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCCh
Confidence 9999999999999999999999999886 999999999999999988877766656667789999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHH
Q 009035 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (546)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 296 (546)
+...++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.++++.|++||+||+|.||||+++|+
T Consensus 169 ~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~ 247 (503)
T d1a4sa_ 169 FMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGK 247 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 678999999999999999999999999
Q ss_pred HHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc
Q 009035 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (546)
Q Consensus 297 ~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v 376 (546)
.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++++|+++|.+.++++++
T Consensus 248 ~i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~ 326 (503)
T d1a4sa_ 248 KVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVV 326 (503)
T ss_dssp HHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHHhhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEee
Confidence 99999887 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc------CCCCceecceeeccCCCCCcccccccccceE
Q 009035 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 450 (546)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl 450 (546)
|+|.++.+++||+++..+++++++++++++++|+++++||... ..+|+|++|||+.+++++|++++||+||||+
T Consensus 327 g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl 406 (503)
T d1a4sa_ 327 GDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVM 406 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred ccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceE
Confidence 9999999999999999999999999999999999999999742 2478999999999999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 009035 451 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 530 (546)
Q Consensus 451 ~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~ 530 (546)
+|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+||||+++..++.+||||+|.||+|+++|.++|++|
T Consensus 407 ~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~ 486 (503)
T d1a4sa_ 407 SVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYY 486 (503)
T ss_dssp EEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGS
T ss_pred EEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999888888999999999999999999999999
Q ss_pred heeeEEEEeCCC-CCCC
Q 009035 531 LQVKAVVTALKN-PAWL 546 (546)
Q Consensus 531 ~~~k~v~~~~~~-~~~~ 546 (546)
|+.|+|++++++ ..||
T Consensus 487 t~~k~v~~~~~~~~~~f 503 (503)
T d1a4sa_ 487 SQLKTVIVEMGDVDSLF 503 (503)
T ss_dssp EEEEEEEECCSCCCCCC
T ss_pred hCeEEEEEcCCCCCCCC
Confidence 999999999865 3454
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.5e-103 Score=843.49 Aligned_cols=471 Identities=36% Similarity=0.644 Sum_probs=443.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.+++||||+|+++ +|++++++||+||++|++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~ 78 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 78 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence 4579999999976 568999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC-CCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.++...++..+...++|++...........+ ...+...+++++|+|||++|+|||||+.+.+++
T Consensus 79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 158 (474)
T d1wnda_ 79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 158 (474)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence 9999999999999999987767777788888877766554433322 224567889999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..++++++++ +|+|++|+|+|+++++++.|++||+|++|.||||+++|+.|.+.++
T Consensus 159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~ 237 (474)
T d1wnda_ 159 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 237 (474)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence 999999999999999999999999999999775 9999999999998999999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
. ++||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++++++++|+|.+++
T Consensus 238 ~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~ 316 (474)
T d1wnda_ 238 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 316 (474)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred c-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence 7 799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCe-EecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAK-LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 462 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~-v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai 462 (546)
+.+||+++..+++++.+++++++++|+. ++.|+.....+|+|++|||+.+++++|.+++||+||||++|++|+|+||||
T Consensus 317 ~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai 396 (474)
T d1wnda_ 317 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 396 (474)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred ceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999985 556666666789999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 463 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 463 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+++|+++|||+++|||+|.++++++++++++|+||||++..+.+.+||||+|.||+|+++|.+|+++||+.|+|+++|
T Consensus 397 ~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 397 NWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEeC
Confidence 999999999999999999999999999999999999999888889999999999999999999999999999999875
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=5.4e-99 Score=819.11 Aligned_cols=468 Identities=33% Similarity=0.547 Sum_probs=438.0
Q ss_pred ccCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
+.++||||+|+.+ +.++.++||. ||++|++++.++.+|+++|+++|++||+ .|+++|.++|.++|+++++.|+++
T Consensus 37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~~ 112 (516)
T d1uzba_ 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 4589999999985 4678999995 7999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC--CCCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
.++|++++++|+|||+.++.. |+..+++.++|++..+.+..+..... ..+...+..++|+|||++|+|||||+.+.+
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~ 191 (516)
T d1uzba_ 113 KRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccc
Confidence 999999999999999999875 99999999999999988776654322 234567788999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.++++++.|+.||+|++|.||||+.+|+.|++.
T Consensus 192 ~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~ 271 (516)
T d1uzba_ 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred ccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999998
Q ss_pred Hhh-----cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc
Q 009035 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (546)
Q Consensus 302 aa~-----~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v 376 (546)
++. .++||+++||||+||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++
T Consensus 272 aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~ 351 (516)
T d1uzba_ 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhccc
Confidence 872 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
| |.++++++||+++..+++++.++|++++++|+.+ +||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 429 (516)
T d1uzba_ 352 G-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp S-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred C-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeC
Confidence 9 6688999999999999999999999999998765 5666667789999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCCCcch-HHHHHhhhee
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKG-SYSLSNYLQV 533 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g~~~g-~~~l~~~~~~ 533 (546)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++++ ..+.+||||+|.||+|+++| .++|++||+.
T Consensus 430 d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~ 509 (516)
T d1uzba_ 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEE
T ss_pred CHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCe
Confidence 99999999999999999999999999999999999999999999754 34689999999999999865 8999999999
Q ss_pred eEEEEe
Q 009035 534 KAVVTA 539 (546)
Q Consensus 534 k~v~~~ 539 (546)
|+|+.+
T Consensus 510 k~v~~r 515 (516)
T d1uzba_ 510 KAVAER 515 (516)
T ss_dssp EEEEEE
T ss_pred eeEEEc
Confidence 999864
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.1e-93 Score=774.99 Aligned_cols=475 Identities=30% Similarity=0.448 Sum_probs=435.5
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (546)
..+...++||||+|+. ++++++++||.||+++++++.++.+|+++|+++|++|++. .|+.+|.++|+++|+++++.|
T Consensus 12 ~~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~a~~l 88 (499)
T d1ky8a_ 12 GGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADII 88 (499)
T ss_dssp TTEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHHHHHH
Confidence 3455678999999986 5789999999999999999999999999999999888763 599999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC-----CCCCCceeeeeccceeEEEEcCccc
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPIGVAGQIIPWNF 215 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~i~p~n~ 215 (546)
+++.++|++++++|+|||+.++.. |+..+++.++|++.+.++..+.... ...+...++.++|+|||++|+||||
T Consensus 89 ~~~~~~la~~~~~etGk~~~~a~~-Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~ 167 (499)
T d1ky8a_ 89 ERNLDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNY 167 (499)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSS
T ss_pred HHhHHHHHHHHHHHhCCCHHHHhh-hhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccc
Confidence 999999999999999999999875 9999999999999988877655422 1234567899999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHH
Q 009035 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (546)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 295 (546)
|+.+.++++++||++||+||+|||+.+|+++..+++++.++|+|+++++++.+.+. .+..|+.|++++.|.||||+..+
T Consensus 168 P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~l~~~~~i~~v~ftGs~~~g 246 (499)
T d1ky8a_ 168 PLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGK-EAEKIVADDRVAAVSFTGSTEVG 246 (499)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGG-GGHHHHHCTTCCEEEEESCHHHH
T ss_pred cchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChH-HHHHHhhccceeEEEeecccccc
Confidence 99999999999999999999999999999999999999999999999999998664 56788999999999999999999
Q ss_pred HHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcc
Q 009035 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (546)
Q Consensus 296 ~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~ 375 (546)
+.+.+.++ .+|+++|+||+||+||++|||+|.|++.+++++|+++||.|++++++|||++++|+|+++|++++++++
T Consensus 247 ~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~ 323 (499)
T d1ky8a_ 247 ERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLR 323 (499)
T ss_dssp HHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred eEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCc
Confidence 99988764 479999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecc---eeeccCCCCCcccccccccceEEE
Q 009035 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKP---TVFTGVKDDMLIAKDEIFGPVQSI 452 (546)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~P---tv~~~v~~~~~i~~eE~fgPvl~v 452 (546)
+|+|.|+++++||+++.+++++++++|++++++|+++++||..... .++.+ ++...+.++|++++||+||||++|
T Consensus 324 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v 401 (499)
T d1ky8a_ 324 VGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP--TYVQPTLVEAPADRVKDMVLYKREVFAPVASA 401 (499)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEET--TEECCEEEECCHHHHTTSHHHHSCCCSSEEEE
T ss_pred cCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccc--cccccccccccccCCCCChhhhccccCceEEE
Confidence 9999999999999999999999999999999999999999986432 23333 333445689999999999999999
Q ss_pred EEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhh
Q 009035 453 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYL 531 (546)
Q Consensus 453 ~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~-~~~pfgG~k~SG~g~~~g~~~l~~~~ 531 (546)
++|+|.+|||+++|+++|||+++|||+|.++++++++++++|+||||+++... +.+||||+|.||+|+++|.+|+++||
T Consensus 402 ~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~ 481 (499)
T d1ky8a_ 402 VEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVT 481 (499)
T ss_dssp EEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHE
T ss_pred EEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999986654 67999999999999999999999999
Q ss_pred eeeEEEEeCCC-CCC
Q 009035 532 QVKAVVTALKN-PAW 545 (546)
Q Consensus 532 ~~k~v~~~~~~-~~~ 545 (546)
+.|+|++++.. +.|
T Consensus 482 ~~k~i~~~~~~~~~~ 496 (499)
T d1ky8a_ 482 AYKTIVFNYKGKGVW 496 (499)
T ss_dssp EEEEEEEECTTSSSC
T ss_pred CEEEEEEcCCCCCCC
Confidence 99999998654 455
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1.2e-90 Score=747.77 Aligned_cols=466 Identities=32% Similarity=0.492 Sum_probs=433.9
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
+..++||||+|+.+ +.+++++||.||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|+++++.|+++
T Consensus 2 k~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~ 77 (474)
T d1euha_ 2 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 77 (474)
T ss_dssp CBCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 34589999999874 57899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcc-----cC-CCCCCceeeeeccceeEEEEcCccchH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-----AP-ADGPYHVQTLHEPIGVAGQIIPWNFPL 217 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~-----~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~ 217 (546)
.++|++++++|+|||..++.. |+...+..++++........... .+ ...+...++.++|+|||++|+|||||+
T Consensus 78 ~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~ 156 (474)
T d1euha_ 78 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156 (474)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence 999999999999999999875 99999999999987765443221 11 123445678899999999999999999
Q ss_pred HHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHH
Q 009035 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (546)
Q Consensus 218 ~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 297 (546)
...++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|..||+|+.|.||||+.+++.
T Consensus 157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~ 236 (474)
T d1euha_ 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 236 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccC
Q 009035 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (546)
Q Consensus 298 i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG 377 (546)
+.+.++ ++|+++|+||+||+||++|||++.|++.+++++|+++||.|+++++||||++++++|++.++++...+++|
T Consensus 237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 988764 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
++.+. .+++|++...+.+++.+.+..+...++..+.++.. .|+|++|||+..++++|++++||+||||++|++|+|
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 389 (474)
T d1euha_ 314 NPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 389 (474)
T ss_dssp CGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred Ccccc-cccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCC
Confidence 99875 45899999999999999999999999888766553 689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEE
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 536 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v 536 (546)
+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|++||++||+.|+|
T Consensus 390 ~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 469 (474)
T d1euha_ 390 VEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 469 (474)
T ss_dssp HHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEE
Confidence 99999999999999999999999999999999999999999997654 46799999999999999999999999999999
Q ss_pred EEeCC
Q 009035 537 VTALK 541 (546)
Q Consensus 537 ~~~~~ 541 (546)
+++++
T Consensus 470 ~~~~~ 474 (474)
T d1euha_ 470 VFDIK 474 (474)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98864
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.8e-85 Score=697.94 Aligned_cols=422 Identities=28% Similarity=0.380 Sum_probs=385.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHh
Q 009035 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (546)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~ 184 (546)
|++||++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+||+..++...|+..+++.+++++....+.
T Consensus 2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~ 79 (446)
T d1ad3a_ 2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW 79 (446)
T ss_dssp HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999 89999999999999999999999999999999999999999987779999999999998776554
Q ss_pred cCccc----CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCC
Q 009035 185 QGLTA----PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260 (546)
Q Consensus 185 ~~~~~----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~ 260 (546)
..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++++. +|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~ 158 (446)
T d1ad3a_ 80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQ 158 (446)
T ss_dssp HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCT
T ss_pred hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccc
Confidence 33221 1223455788999999999999999999999999999999999999999999999999999999775 999
Q ss_pred CcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHh
Q 009035 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340 (546)
Q Consensus 261 gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f 340 (546)
++++++.+.+...+ .+. ++++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|
T Consensus 159 ~~~~~~~~~~~~~~-~~~-~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 159 NLYLVVKGGVPETT-ELL-KERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp TTEEECCCSHHHHH-HHT-TSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccccchhhh-hhc-ccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 99999998665554 343 5689999999999999999999887 78999999999999999999999999999999999
Q ss_pred ccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC
Q 009035 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (546)
Q Consensus 341 ~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 420 (546)
.|+||.|++++|||||+++||+|+++|.+.++.+ +|+|.++++++||+++..+++++.++++++ +...|+. .+
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~-~~ 308 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGT-WD 308 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCC-EE
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hccccee-ec
Confidence 9999999999999999999999999999998877 899999999999999999999998887654 3433333 34
Q ss_pred CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcC
Q 009035 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 500 (546)
Q Consensus 421 ~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~ 500 (546)
..++|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~ 388 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTAND 388 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESS
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeC
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 501 FDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 501 ~~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 389 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 429 (446)
T d1ad3a_ 389 VIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 429 (446)
T ss_dssp SSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEEC
T ss_pred CccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEc
Confidence 653 557899999999999999999999999999999885
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=7.9e-81 Score=673.57 Aligned_cols=440 Identities=21% Similarity=0.300 Sum_probs=377.3
Q ss_pred CCCeeeeecCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCC
Q 009035 79 SGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (546)
Q Consensus 79 ~~~~~~v~~P~tge~i~-~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 157 (546)
++++|+++||+|||+|+ .++.++.+||++|+++|++||. .|++++.++|.++|+++++.|++|+++|++++++|+||
T Consensus 1 t~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk 78 (504)
T d1ez0a_ 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 78 (504)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35789999999999997 7999999999999999999999 89999999999999999999999999999999999999
Q ss_pred ChhhhhhccchHHHHHHHHHHHHhhHhcCcccC------C---CCCCceeeeeccceeEEEEcCccchHHHH--HHHHHH
Q 009035 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP------A---DGPYHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGP 226 (546)
Q Consensus 158 ~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~------~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~ 226 (546)
|+.+++. |+..+++.++||+++.++....... . ......+..++|+|||++|+|||||+.+. .+++++
T Consensus 79 p~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ 157 (504)
T d1ez0a_ 79 PEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 157 (504)
T ss_dssp CHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHH
Confidence 9999875 9999999999999988765443211 1 12345678889999999999999999654 469999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHH----HHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSK----LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~----~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
||++||+||+|||+.+|.++.++.+ ++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|.+.+
T Consensus 158 ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~a 237 (504)
T d1ez0a_ 158 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237 (504)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhh
Confidence 9999999999999999999877654 456779999999999999999999999999999999999999999999999
Q ss_pred hhcCCcce--EeecCCcCcEEEecCCCHHHHH--HHHHHHHhccCCCcccCCCeEEEcccch-HHHHHHHHHhhhhcccC
Q 009035 303 AKSNLKPV--TLELGGKSPFIVCEDADVDKAA--ELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVG 377 (546)
Q Consensus 303 a~~~~~pv--~lelgG~~p~iV~~dADl~~a~--~~i~~~~f~~~GQ~C~a~~~v~V~~~v~-d~f~~~L~~~~~~~~vG 377 (546)
++ +++|+ ++|+|||||+||++|||++.|+ +.++.++|.|+||.|++++|+||+++.+ +.|++.+++.++. +
T Consensus 238 a~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~ 313 (504)
T d1ez0a_ 238 HE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q 313 (504)
T ss_dssp HH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C
T ss_pred hc-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c
Confidence 87 67665 5599999999999999999874 5789999999999999999999888765 4666666655443 2
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeecc---CCCCCcccccccccceEEEEE
Q 009035 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILK 454 (546)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~---v~~~~~i~~eE~fgPvl~v~~ 454 (546)
++++.+||+++..+++++ ++.+.++|+.+..|+.. +.+..|+++.. +..++++++||+||||++|++
T Consensus 314 ---~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~ 383 (504)
T d1ez0a_ 314 ---SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVV 383 (504)
T ss_dssp ---CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEE
T ss_pred ---ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeee
Confidence 457899999999888776 56677888888888763 34455555443 335688999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCceEEEEcC--CHHHHHHHHHHhc--eeEEEEcCCCCC---C----CCCCccCCCCCCCCCcch
Q 009035 455 YKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDVF---D----AAIPFGGYKQSGQGREKG 523 (546)
Q Consensus 455 ~~~~~eai~~~N~~~~gL~a~v~t~--d~~~a~~~~~~l~--~g~V~iN~~~~~---~----~~~pfgG~k~SG~g~~~g 523 (546)
|+|+||||+++|+++|||+++|||+ |..++.+++++|+ +|+||||++++. . ..-||||.|.||.| ..|
T Consensus 384 ~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G 462 (504)
T d1ez0a_ 384 CENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVG 462 (504)
T ss_dssp ESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSS
T ss_pred cCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cch
Confidence 9999999999999999999999996 5568999999996 899999987541 1 23488888999955 468
Q ss_pred HHHHHhhheeeEE
Q 009035 524 SYSLSNYLQVKAV 536 (546)
Q Consensus 524 ~~~l~~~~~~k~v 536 (546)
.+++++|+++.++
T Consensus 463 ~~~i~~f~r~v~~ 475 (504)
T d1ez0a_ 463 AEAIHRWLRPVAY 475 (504)
T ss_dssp GGGGGGGEEEEEE
T ss_pred HHHHHHHhchhhh
Confidence 9999999987553
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.3e-66 Score=545.57 Aligned_cols=388 Identities=19% Similarity=0.179 Sum_probs=315.6
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhc-----------cchHHH
Q 009035 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT-----------EVPMTT 171 (546)
Q Consensus 103 ~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~-----------ev~~~~ 171 (546)
||+++++++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||+..++... ++..++
T Consensus 1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~ 78 (414)
T d1o20a_ 1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 78 (414)
T ss_dssp CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHH
Confidence 578999999999999 8999999999999999999999999999999999999998775431 256678
Q ss_pred HHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHH
Q 009035 172 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251 (546)
Q Consensus 172 ~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~ 251 (546)
+.+++++...+...+...+..........++|+||+++++|||||+.+.++++++||++||+||+|||+.+|.++..+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~ 158 (414)
T d1o20a_ 79 KACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVS 158 (414)
T ss_dssp HHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhh
Confidence 88888887766555544443334456778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcC-cEEEecCC
Q 009035 252 LLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS-PFIVCEDA 326 (546)
Q Consensus 252 ~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~-p~iV~~dA 326 (546)
++.++ |+|.++++.+.+.+......+.. .+.+.|+||+..++.+.+.+++ +.+++++|+||+| ++||++||
T Consensus 159 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~dA 234 (414)
T d1o20a_ 159 AIREALKETEIPESSVEFIENTDRSLVLEMIR---LREYLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDESA 234 (414)
T ss_dssp HHHHHHTTSSSCGGGEEECCCCCTHHHHHHTT---CTTTCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTTS
T ss_pred HHHhhhhhccccccccccccccchhhhhhccc---ccccCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeeccccc
Confidence 98877 45555577777666565555554 3455556666666777777776 5677788887765 57888999
Q ss_pred CHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHH
Q 009035 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406 (546)
Q Consensus 327 Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~ 406 (546)
|++.|++.++.+.|++ ||.|++++|+|||+++||+|+++|.+...+..++++.++..
T Consensus 235 d~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~---------------------- 291 (414)
T d1o20a_ 235 DLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT---------------------- 291 (414)
T ss_dssp CHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH----------------------
T ss_pred chhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchhh----------------------
Confidence 9999999999999877 99999999999999999999999998887765544332111
Q ss_pred hCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHH
Q 009035 407 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 486 (546)
Q Consensus 407 ~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~ 486 (546)
.++.+.+... ....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 292 -----------------~~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~ 351 (414)
T d1o20a_ 292 -----------------REIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKK 351 (414)
T ss_dssp -----------------HHHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHH
T ss_pred -----------------hhhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHH
Confidence 1112222221 22346899999999999999999999999999999999999999999999
Q ss_pred HHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhheeeEEEEe
Q 009035 487 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 487 ~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g--~~--~g~~~l~~~~~~k~v~~~ 539 (546)
+++++++|+|+||+++.+....|||+.+.||+| +. +|++||++||+.|+|+..
T Consensus 352 ~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 352 FVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG 408 (414)
T ss_dssp HHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred HHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEEC
Confidence 999999999999998765555566666666653 33 389999999999998765
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.1e-53 Score=443.99 Aligned_cols=400 Identities=16% Similarity=0.149 Sum_probs=283.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHH------HhcCCChhhhh------hccchHHH
Q 009035 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALET------WDNGKPFEQSA------QTEVPMTT 171 (546)
Q Consensus 104 dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~------~e~Gk~~~~a~------~~ev~~~~ 171 (546)
.++++++.|++|++ .|+.++.++|.++|+++++.|++|.++|+++.. .+.|++..... ...+...+
T Consensus 4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence 46788999999999 899999999999999999999999999988544 44565432111 01244455
Q ss_pred HHHHHHHHHhhHhcCccc--CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHH
Q 009035 172 RLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (546)
Q Consensus 172 ~~l~~~a~~a~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l 249 (546)
+.++..+.+.+....... ..+.+...+..+.|+||+++| |+++| .....+.++||++||+||+||++.++.|+..+
T Consensus 82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l 159 (436)
T d1vlua_ 82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM 159 (436)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence 666666554332211111 123456678899999999988 66777 56677889999999999999999999999888
Q ss_pred HHHHH--------HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEE
Q 009035 250 SKLLH--------EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (546)
Q Consensus 250 ~~~l~--------~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~i 321 (546)
+++++ ++|+|+++++++++ +.+++..|..|++||.|+||||...++.+.+. ..+|++.++||++|+|
T Consensus 160 ~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~ 234 (436)
T d1vlua_ 160 AKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIY 234 (436)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEE
T ss_pred HHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCcccee
Confidence 77664 66999999999987 56788999999999999999999988877553 3469999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 009035 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (546)
Q Consensus 322 V~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~ 401 (546)
|++|||+|.|++.++.++|++.|| |++.++++||+++++.|...+....+. | ..+. .+... ...
T Consensus 235 Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---g------v~l~--~~~~~----~~~ 298 (436)
T d1vlua_ 235 LDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---G------VTIH--ATKDL----KTA 298 (436)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---C------CCBE--ECHHH----HHH
T ss_pred ecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---C------cEEE--eCHHH----HHH
Confidence 999999999999999999999997 889999999999998886555443332 1 1111 11221 122
Q ss_pred HHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCH
Q 009035 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481 (546)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 481 (546)
..+.... .+. ..+....|++...... .+.+|.|+|+++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 299 ~~~~~~~------~~~---~~~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~ 366 (436)
T d1vlua_ 299 YFDKLNE------LGK---LTEAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENK 366 (436)
T ss_dssp HHHHHHH------HTC---CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCH
T ss_pred hhhhhhh------ccc---ccccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCH
Confidence 2111111 111 1233344555433332 367999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeEEEEcCCCCCCCCCCccCC---CCC-CCCCcchHHHHHhhheeeEEEEeC
Q 009035 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGY---KQS-GQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 482 ~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~---k~S-G~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+.+++|++++++|.|+||+++.|..+.+||-- +.| +..+..|+.||+..|..|.++...
T Consensus 367 ~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 367 ANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp HHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECS
T ss_pred HHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence 99999999999999999999988777777621 222 333568999999999999988754
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.95 E-value=0.22 Score=49.08 Aligned_cols=324 Identities=16% Similarity=0.128 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCC----ChhhhhhccchHH--------HHHHHHHHHHhhHhcCcccCC--
Q 009035 126 AYERSKIILRFADLLERHNDEIAALETWDNGK----PFEQSAQTEVPMT--------TRLFRYYAGWADKIQGLTAPA-- 191 (546)
Q Consensus 126 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk----~~~~a~~~ev~~~--------~~~l~~~a~~a~~~~~~~~~~-- 191 (546)
.++-.+..+.+.+.++.+.|.-....++...+ .+.-. ..|+..+ .+.|+......+..+....+.
T Consensus 26 ~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs-~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~ 104 (431)
T d1k75a_ 26 SESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPV 104 (431)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 34455566677777777777766666665432 11111 1244433 222334444444443333221
Q ss_pred ----CCCCceeeeeccceeEEEEcCcc---chHHHHHHHHHHHhhcCCeEE--EecCCCChHHHHHHHHHHHHcCCCCCc
Q 009035 192 ----DGPYHVQTLHEPIGVAGQIIPWN---FPLLMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGV 262 (546)
Q Consensus 192 ----~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~VV--lkps~~~p~t~~~l~~~l~~aGlP~gv 262 (546)
..+......+.|+=-|++..|.- ||-..++ ..+||..+|+.=| .-|+...|.+ .-..+.+|+.+
T Consensus 105 ~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM-~aiPAkvAGV~~Ivv~tPp~~~~~~----l~aa~~~Gv~~-- 177 (431)
T d1k75a_ 105 DVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPPPIADEI----LYAAQLCGVQD-- 177 (431)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHHHH-HHHHHHHHTCSEEEEEECSSCCHHH----HHHHHHTTCCE--
T ss_pred eeeccCCceeeeeeeehhhheeeccCCCccchHHHHH-HHHHHHhcCCCceeEEeCCCCcchH----HHHHHHcCccc--
Confidence 23455677888999999999964 6655555 5789999997654 4555445432 23344566653
Q ss_pred EEEEeCCchhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEe-ecCCcCc--EEEecCCCHHHHHHHH
Q 009035 263 LNIVSGYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-ELGGKSP--FIVCEDADVDKAAELA 335 (546)
Q Consensus 263 v~vv~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~l-elgG~~p--~iV~~dADl~~a~~~i 335 (546)
+..-.|...-.+|. +-|+||+|+=.|+.=+..+=.+.... ...|-. -+-|.+= +|-++++|.+.++..+
T Consensus 178 --iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~--~~~vgID~~aGPSEv~viAD~~a~p~~iAaDl 253 (431)
T d1k75a_ 178 --VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR--LDGAAIDMPAGPSEVLVIADSGATPDFVASDL 253 (431)
T ss_dssp --EEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHS--TTSCEESCCCCCCEEEEEECTTSCHHHHHHHH
T ss_pred --eEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhccc--CCccccccccCCceEEEEecCCCCHHHHHHHH
Confidence 33333555555555 26789999999987654422222221 011211 1234443 3335568999988777
Q ss_pred HHHHhccCCCcccCCCeEEEccc--chHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEe
Q 009035 336 HYALFFNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 413 (546)
Q Consensus 336 ~~~~f~~~GQ~C~a~~~v~V~~~--v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~ 413 (546)
+.-+=+... .+-++|..+ ..+++.+.+.+.+..+. . . +.++...
T Consensus 254 laQAEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~----r---~---------------~i~~~s~------- 299 (431)
T d1k75a_ 254 LSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAELP----R---A---------------ETARQAL------- 299 (431)
T ss_dssp HHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS----S---C---------------HHHHHHH-------
T ss_pred HhccCCccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch----H---H---------------HHHHhhh-------
Confidence 766655543 233666655 33444444433332211 0 0 0001000
Q ss_pred cCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-c
Q 009035 414 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-R 492 (546)
Q Consensus 414 ~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~ 492 (546)
+-. .++.++|++|+++++|..-.= ...|.++|.. .+...+ +
T Consensus 300 ------------------------------~~~----~ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~n 341 (431)
T d1k75a_ 300 ------------------------------NAS----RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITS 341 (431)
T ss_dssp ------------------------------TTC----EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCC
T ss_pred ------------------------------ccc----eEEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhh
Confidence 011 244679999999999987554 5788898865 566666 6
Q ss_pred eeEEEEcCCCC---------CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 493 VGSVWINCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 493 ~g~V~iN~~~~---------~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
+|.|++..++. .++-+|-| |.+|+.+.-+++.|++..++..
T Consensus 342 AGsIflG~~sp~a~GDY~aGpnHvLPT~-----G~Ar~~sgLsv~dF~k~~s~~~ 391 (431)
T d1k75a_ 342 AGSVFLGDWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQE 391 (431)
T ss_dssp CSEEEESTTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCCCGGGGEEEEEEEE
T ss_pred cchhhcCCCCcchhhccccCCCccCCCC-----CceeecCCCCHHHeeeeeeEEE
Confidence 99999998653 12345655 4566666677888888877653
|